Clone Name	baal41f13
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY769475.1| Stylonychia lemnae macronuclear development prote...	46	0.081
2	emb|BX936461.17| Zebrafish DNA sequence from clone CH211-14A11 i...	46	0.081
3	gb|AC161120.5| Mus musculus BAC clone RP23-84A2 from chromosome ...	44	0.32
4	gb|AC151846.3| Mus musculus BAC clone RP23-13B8 from chromosome ...	44	0.32
5	emb|BX663495.9| Zebrafish DNA sequence from clone DKEY-116G14 in...	44	0.32
6	gb|AC087114.7| Mus musculus Strain C57BL6/J Chromosome 10 RP23-3...	44	0.32
7	gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 ma...	44	0.32
8	gb|U60335.1|MMU60335 Mus musculus Bright mRNA, complete cds	44	0.32
9	dbj|AK154956.1| Mus musculus NOD-derived CD11c +ve dendritic cel...	44	0.32
10	dbj|AK141283.1| Mus musculus 7 days embryo whole body cDNA, RIKE...	44	0.32
11	dbj|AK155569.1| Mus musculus NOD-derived CD11c +ve dendritic cel...	44	0.32
12	gb|BC050925.1| Mus musculus AT rich interactive domain 3A (Brigh...	44	0.32
13	ref|NM_007880.2| Mus musculus AT rich interactive domain 3A (Bri...	44	0.32
14	gb|AC130659.11| Mus musculus chromosome 1, clone RP23-326C19, co...	42	1.3
15	gb|AC162295.3| Mus musculus chromosome 1, clone RP24-232K22, com...	42	1.3
16	emb|X96770.1|SCLACHXVI S.cerevisiae chromosome XVI, left arm DNA	42	1.3
17	gb|AC021198.2|F14D7 Sequence of BAC F14D7 from Arabidopsis thali...	42	1.3
18	emb|Z73517.1|SCYPL161C S.cerevisiae chromosome XVI reading frame...	42	1.3
19	gb|DQ331753.1| Synthetic construct Saccharomyces cerevisiae clon...	42	1.3
20	gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome	42	1.3
21	gb|L27816.1|YSCBEM4P Saccharomyces cerevisiae Bem4p (BEM4) gene,...	42	1.3
22	ref|XM_465669.1| Oryza sativa (japonica cultivar-group), mRNA	40	5.0
23	gb|AC161494.3| Mus musculus chromosome 5, clone RP23-295B4, comp...	40	5.0
24	gb|AF411339.1| Homo sapiens brain-derived neurotrophic factor op...	40	5.0
25	ref|XM_460255.1| Debaryomyces hansenii CBS767 hypothetical prote...	40	5.0
26	gb|AY258271.1| Cucumis sativus MSC16 rearranged 18S ribosomal RN...	40	5.0
27	ref|XM_001001466.1| PREDICTED: Mus musculus sine oculis-related ...	40	5.0
28	ref|XM_756350.1| Ustilago maydis 521 hypothetical protein (UM052...	40	5.0
29	emb|Z35599.1|CEF25F2 Caenorhabditis elegans Cosmid F25F2, comple...	40	5.0
30	gb|AE014301.1| Homo sapiens chromosome 13q34 schizophrenia regio...	40	5.0
31	ref|NM_011382.1| Mus musculus sine oculis-related homeobox 4 hom...	40	5.0
32	gb|AC122025.3| Mus musculus BAC clone RP24-388G8 from 12, comple...	40	5.0
33	gb|AC113596.8| Mus musculus chromosome 5, clone RP23-374B20, com...	40	5.0
34	emb|AL356778.13| Human DNA sequence from clone RP11-75C5 on chro...	40	5.0
35	gb|AC087446.13| Homo sapiens chromosome 11, clone RP11-651M4, co...	40	5.0
36	gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, c...	40	5.0
37	emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS...	40	5.0
38	emb|AL591979.1| Listeria monocytogenes strain EGD, complete geno...	40	5.0
39	emb|AL596168.1| Listeria innocua Clip11262 complete genome, segm...	40	5.0
40	emb|AJ400722.1|SHA400722 Staphylococcus haemolyticus blaZ gene, ...	40	5.0
41	gb|AC159274.2| Mus musculus BAC clone RP23-405C6 from chromosome...	40	5.0
42	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	40	5.0
43	gb|AF254822.1|AF254822 Homo sapiens SMARCA4 isoform (SMARCA4) ge...	40	5.0
44	gb|AY057907.1| Mus musculus brain-derived neurotrophic factor (B...	40	5.0
45	gb|AC027032.9|AC027032 Arabidopsis thaliana chromosome 1 BAC F10...	40	5.0
46	gb|AC011442.5|AC011442 Homo sapiens chromosome 19 clone CTC-215O...	40	5.0
47	ref|XM_234292.3| PREDICTED: Rattus norvegicus sine oculis-relate...	40	5.0
48	gb|AF167161.1|AF167161 Staphylococcus aureus plasmid pSR1, parti...	40	5.0
49	dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic D...	40	5.0
50	gb|AC147995.3| Mus musculus BAC clone RP24-294O4 from 8, complet...	40	5.0
51	dbj|AP002841.3| Homo sapiens genomic DNA, chromosome 11 clone:RP...	40	5.0
52	gb|AF432069.1| Listeria monocytogenes PrfA regulated bile exclus...	40	5.0
53	dbj|AP003057.2| Homo sapiens genomic DNA, chromosome 11q clone:R...	40	5.0
54	gb|AC163695.2| Ornithorhynchus anatinus BAC clone OABb-35L5 from...	40	5.0
55	gb|AC130537.4| Mus musculus BAC clone RP23-412D3 from 8, complet...	40	5.0
56	gb|AY285487.1| Sus scrofa clone UMNp764.gcg microsatellite sequence	40	5.0
57	emb|AL844537.5| Mouse DNA sequence from clone RP23-448A16 on chr...	40	5.0
58	emb|AL732477.10| Mouse DNA sequence from clone RP23-393E8 on chr...	40	5.0
59	gb|L23109.1|STASINA Staphylococcus aureus recombinase (sin) gene...	40	5.0
60	dbj|D50418.1|MUSAREC3C Mouse mRNA for AREC3, partial cds	40	5.0
61	dbj|D50417.1|MUSAREC3B Mouse mRNA for AREC3, partial cds	40	5.0
62	dbj|D50416.1|MUSAREC3A Mouse mRNA for AREC3, complete cds	40	5.0

---

>gb|AY769475.1| Stylonychia lemnae macronuclear development protein 79 (mdp79)
           mRNA, partial sequence
          Length = 612

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 225 ataagaggcttatgaatttttca 247
           |||||||||||||||||||||||
Sbjct: 516 ataagaggcttatgaatttttca 494

---

>emb|BX936461.17| Zebrafish DNA sequence from clone CH211-14A11 in linkage group 20,
             complete sequence
          Length = 103791

 Score = 46.1 bits (23), Expect = 0.081
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 204   tattgcgatattattgctgaaat 226
             |||||||||||||||||||||||
Sbjct: 40712 tattgcgatattattgctgaaat 40690

---

>gb|AC161120.5| Mus musculus BAC clone RP23-84A2 from chromosome 10, complete sequence
          Length = 214638

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 275    gaagctgctgtaggaggtggtggctg 300
              |||| |||||||||||||||||||||
Sbjct: 117187 gaaggtgctgtaggaggtggtggctg 117162

---

>gb|AC151846.3| Mus musculus BAC clone RP23-13B8 from chromosome 10, complete sequence
          Length = 252639

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 275   gaagctgctgtaggaggtggtggctg 300
             |||| |||||||||||||||||||||
Sbjct: 48220 gaaggtgctgtaggaggtggtggctg 48245

---

>emb|BX663495.9| Zebrafish DNA sequence from clone DKEY-116G14 in linkage group 2,
             complete sequence
          Length = 80339

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 205   attgcgatattattgctgaaat 226
             ||||||||||||||||||||||
Sbjct: 13950 attgcgatattattgctgaaat 13971

---

>gb|AC087114.7| Mus musculus Strain C57BL6/J Chromosome 10 RP23-309M23, complete sequence
          Length = 185825

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 275    gaagctgctgtaggaggtggtggctg 300
              |||| |||||||||||||||||||||
Sbjct: 108082 gaaggtgctgtaggaggtggtggctg 108057

---

>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete
             sequence
          Length = 93158

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 242   ttttcaatctttgtgtaccttg 263
             ||||||||||||||||||||||
Sbjct: 25173 ttttcaatctttgtgtaccttg 25152

---

>gb|U60335.1|MMU60335 Mus musculus Bright mRNA, complete cds
          Length = 4842

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 275  gaagctgctgtaggaggtggtggctg 300
            |||| |||||||||||||||||||||
Sbjct: 1910 gaaggtgctgtaggaggtggtggctg 1885

---

>dbj|AK154956.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
            full-length enriched library, clone:F630112N16 product:AT
            rich interactive domain 3A (Bright like), full insert
            sequence
          Length = 5327

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 275  gaagctgctgtaggaggtggtggctg 300
            |||| |||||||||||||||||||||
Sbjct: 2094 gaaggtgctgtaggaggtggtggctg 2069

---

>dbj|AK141283.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:C430019I12 product:AT rich
            interactive domain 3A (Bright like), full insert sequence
          Length = 4893

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 275  gaagctgctgtaggaggtggtggctg 300
            |||| |||||||||||||||||||||
Sbjct: 1969 gaaggtgctgtaggaggtggtggctg 1944

---

>dbj|AK155569.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630326O08
           product:AT rich interactive domain 3A (Bright like),
           full insert sequence
          Length = 1843

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 275 gaagctgctgtaggaggtggtggctg 300
           |||| |||||||||||||||||||||
Sbjct: 977 gaaggtgctgtaggaggtggtggctg 952

---

>gb|BC050925.1| Mus musculus AT rich interactive domain 3A (Bright like), mRNA (cDNA
            clone MGC:63320 IMAGE:6831312), complete cds
          Length = 4962

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 275  gaagctgctgtaggaggtggtggctg 300
            |||| |||||||||||||||||||||
Sbjct: 2020 gaaggtgctgtaggaggtggtggctg 1995

---

>ref|NM_007880.2| Mus musculus AT rich interactive domain 3A (Bright like) (Arid3a),
            mRNA
          Length = 5327

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 275  gaagctgctgtaggaggtggtggctg 300
            |||| |||||||||||||||||||||
Sbjct: 2094 gaaggtgctgtaggaggtggtggctg 2069

---

>gb|AC130659.11| Mus musculus chromosome 1, clone RP23-326C19, complete sequence
          Length = 172121

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 221   tgaaataagaggcttatgaat 241
             |||||||||||||||||||||
Sbjct: 72242 tgaaataagaggcttatgaat 72262

---

>gb|AC162295.3| Mus musculus chromosome 1, clone RP24-232K22, complete sequence
          Length = 180957

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 221   tgaaataagaggcttatgaat 241
             |||||||||||||||||||||
Sbjct: 21813 tgaaataagaggcttatgaat 21793

---

>emb|X96770.1|SCLACHXVI S.cerevisiae chromosome XVI, left arm DNA
          Length = 55786

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 174   tacaatgagcttattattgaaggtt 198
             |||||| ||||||||||||||||||
Sbjct: 18399 tacaattagcttattattgaaggtt 18423

---

>gb|AC021198.2|F14D7 Sequence of BAC F14D7 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 81513

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 171   atatacaatgagcttattatt 191
             |||||||||||||||||||||
Sbjct: 72632 atatacaatgagcttattatt 72612

---

>emb|Z73517.1|SCYPL161C S.cerevisiae chromosome XVI reading frame ORF YPL161c
          Length = 2962

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 174  tacaatgagcttattattgaaggtt 198
            |||||| ||||||||||||||||||
Sbjct: 1201 tacaattagcttattattgaaggtt 1225

---

>gb|DQ331753.1| Synthetic construct Saccharomyces cerevisiae clone FLH202324.01X
           BEM4 gene, complete sequence
          Length = 1902

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 174 tacaatgagcttattattgaaggtt 198
           |||||| ||||||||||||||||||
Sbjct: 993 tacaattagcttattattgaaggtt 969

---

>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 131     aattgaaaaatcttgattcaa 151
               |||||||||||||||||||||
Sbjct: 1993133 aattgaaaaatcttgattcaa 1993113

---

>gb|L27816.1|YSCBEM4P Saccharomyces cerevisiae Bem4p (BEM4) gene, complete cds
          Length = 3136

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 174  tacaatgagcttattattgaaggtt 198
            |||||| ||||||||||||||||||
Sbjct: 1662 tacaattagcttattattgaaggtt 1638

---

>ref|XM_465669.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3087

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 7    aacccccagcttcagaaacattag 30
            |||||||| |||||||||||||||
Sbjct: 1417 aacccccaacttcagaaacattag 1394

---

>gb|AC161494.3| Mus musculus chromosome 5, clone RP23-295B4, complete sequence
          Length = 182261

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    tgaatttttcaatctttgtg 256
              ||||||||||||||||||||
Sbjct: 148742 tgaatttttcaatctttgtg 148723

---

>gb|AF411339.1| Homo sapiens brain-derived neurotrophic factor opposite strand (BDNFOS)
             gene, partial sequence; and brain-derived neurotrophic
             factor (BDNF) gene, complete cds
          Length = 115886

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   ttataattgaaaaatcttga 146
             ||||||||||||||||||||
Sbjct: 32416 ttataattgaaaaatcttga 32435

---

>ref|XM_460255.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E23188g)
           partial mRNA
          Length = 1599

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 44  ttattattgaaattcttgat 63
           ||||||||||||||||||||
Sbjct: 290 ttattattgaaattcttgat 271

---

>gb|AY258271.1| Cucumis sativus MSC16 rearranged 18S ribosomal RNA (rrn18) and 5S
           ribosomal RNA (rrn5) genes, complete sequence; and NADH
           dehydrogenase subunit 5 (nad5) gene, partial cds;
           mitochondrial genes for mitochondrial products
          Length = 11003

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 136 aaaaatcttgattcaagata 155
           ||||||||||||||||||||
Sbjct: 488 aaaaatcttgattcaagata 469

---

>ref|XM_001001466.1| PREDICTED: Mus musculus sine oculis-related homeobox 4 homolog
           (Drosophila) (Six4), mRNA
          Length = 1713

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 281 gctgtaggaggtggtggctg 300
           ||||||||||||||||||||
Sbjct: 678 gctgtaggaggtggtggctg 659

---

>ref|XM_756350.1| Ustilago maydis 521 hypothetical protein (UM05296.1) partial mRNA
          Length = 747

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 52  gaaattcttgattcaagatg 71
           ||||||||||||||||||||
Sbjct: 179 gaaattcttgattcaagatg 160

---

>emb|Z35599.1|CEF25F2 Caenorhabditis elegans Cosmid F25F2, complete sequence
          Length = 29551

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 129   ataattgaaaaatcttgatt 148
             ||||||||||||||||||||
Sbjct: 18870 ataattgaaaaatcttgatt 18851

---

>gb|AE014301.1| Homo sapiens chromosome 13q34 schizophrenia region contig 2 section 1
             of 3 of the complete sequence
          Length = 106598

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   attgaaaaatcttgattcaa 151
             ||||||||||||||||||||
Sbjct: 39559 attgaaaaatcttgattcaa 39540

---

>ref|NM_011382.1| Mus musculus sine oculis-related homeobox 4 homolog (Drosophila)
            (Six4), mRNA
          Length = 5566

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  gctgtaggaggtggtggctg 300
            ||||||||||||||||||||
Sbjct: 1354 gctgtaggaggtggtggctg 1335

---

>gb|AC122025.3| Mus musculus BAC clone RP24-388G8 from 12, complete sequence
          Length = 202612

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   gctgtaggaggtggtggctg 300
             ||||||||||||||||||||
Sbjct: 25838 gctgtaggaggtggtggctg 25857

---

>gb|AC113596.8| Mus musculus chromosome 5, clone RP23-374B20, complete sequence
          Length = 203500

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    tgaatttttcaatctttgtg 256
              ||||||||||||||||||||
Sbjct: 177371 tgaatttttcaatctttgtg 177390

---

>emb|AL356778.13| Human DNA sequence from clone RP11-75C5 on chromosome 13 Contains the
             5' end of the gene for a novel protein (ortholog of rat
             putative four repeat ion channel) and a CpG island,
             complete sequence
          Length = 87397

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   attgaaaaatcttgattcaa 151
             ||||||||||||||||||||
Sbjct: 43254 attgaaaaatcttgattcaa 43235

---

>gb|AC087446.13| Homo sapiens chromosome 11, clone RP11-651M4, complete sequence
          Length = 167865

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   ttataattgaaaaatcttga 146
             ||||||||||||||||||||
Sbjct: 84377 ttataattgaaaaatcttga 84396

---

>gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, complete sequence
          Length = 211799

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 127   ttataattgaaaaatcttga 146
             ||||||||||||||||||||
Sbjct: 24854 ttataattgaaaaatcttga 24835

---

>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
               hansenii
          Length = 2037969

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 44      ttattattgaaattcttgat 63
               ||||||||||||||||||||
Sbjct: 1813662 ttattattgaaattcttgat 1813643

---

>emb|AL591979.1| Listeria monocytogenes strain EGD, complete genome, segment 7/12
          Length = 240050

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   aaacattagataaatatcca 124
             ||||||||||||||||||||
Sbjct: 44147 aaacattagataaatatcca 44166

---

>emb|AL596168.1| Listeria innocua Clip11262 complete genome, segment 6/12
          Length = 333050

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    aaacattagataaatatcca 124
              ||||||||||||||||||||
Sbjct: 244207 aaacattagataaatatcca 244226

---

>emb|AJ400722.1|SHA400722 Staphylococcus haemolyticus blaZ gene, blaR gene, blaI gene, binR
            gene, sin gene, qacR gene, qacA gene, ORF186, ORFB, repX
            gene and tnpA gene (partial)
          Length = 11659

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   cttcagaaacattagataaa 118
            ||||||||||||||||||||
Sbjct: 5134 cttcagaaacattagataaa 5153



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   cttcagaaacattagataaa 35
            ||||||||||||||||||||
Sbjct: 5134 cttcagaaacattagataaa 5153

---

>gb|AC159274.2| Mus musculus BAC clone RP23-405C6 from chromosome 12, complete sequence
          Length = 200974

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 281   gctgtaggaggtggtggctg 300
             ||||||||||||||||||||
Sbjct: 99457 gctgtaggaggtggtggctg 99476

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 7        aacccccagcttcagaaacattag 30
                |||||||| |||||||||||||||
Sbjct: 16708753 aacccccaacttcagaaacattag 16708776

---

>gb|AF254822.1|AF254822 Homo sapiens SMARCA4 isoform (SMARCA4) gene, complete cds,
             alternatively spliced
          Length = 102910

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   gctgctgtaggaggtggtgg 297
             ||||||||||||||||||||
Sbjct: 35737 gctgctgtaggaggtggtgg 35756

---

>gb|AY057907.1| Mus musculus brain-derived neurotrophic factor (Bdnf) gene, complete
            cds, alternatively spliced
          Length = 80945

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 127  ttataattgaaaaatcttga 146
            ||||||||||||||||||||
Sbjct: 6463 ttataattgaaaaatcttga 6482

---

>gb|AC027032.9|AC027032 Arabidopsis thaliana chromosome 1 BAC F10O5 genomic sequence,
            complete sequence
          Length = 90707

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 170  tatatacaatgagcttatta 189
            ||||||||||||||||||||
Sbjct: 9391 tatatacaatgagcttatta 9372

---

>gb|AC011442.5|AC011442 Homo sapiens chromosome 19 clone CTC-215O4, complete sequence
          Length = 143557

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    gctgctgtaggaggtggtgg 297
              ||||||||||||||||||||
Sbjct: 117563 gctgctgtaggaggtggtgg 117582

---

>ref|XM_234292.3| PREDICTED: Rattus norvegicus sine oculis-related homeobox 4 homolog
            (Drosophila) (predicted) (Six4_predicted), mRNA
          Length = 2379

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  gctgtaggaggtggtggctg 300
            ||||||||||||||||||||
Sbjct: 1344 gctgtaggaggtggtggctg 1325

---

>gb|AF167161.1|AF167161 Staphylococcus aureus plasmid pSR1, partial sequence
          Length = 11372

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   cttcagaaacattagataaa 118
            ||||||||||||||||||||
Sbjct: 7977 cttcagaaacattagataaa 7996



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   cttcagaaacattagataaa 35
            ||||||||||||||||||||
Sbjct: 7977 cttcagaaacattagataaa 7996

---

>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0091C16
          Length = 162527

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 7     aacccccagcttcagaaacattag 30
             |||||||| |||||||||||||||
Sbjct: 85808 aacccccaacttcagaaacattag 85831

---

>gb|AC147995.3| Mus musculus BAC clone RP24-294O4 from 8, complete sequence
          Length = 182583

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   tgctgaaataagaggcttat 237
             ||||||||||||||||||||
Sbjct: 80754 tgctgaaataagaggcttat 80735

---

>dbj|AP002841.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-239P2, complete
              sequence
          Length = 176485

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 100    ttcagaaacattagataaat 119
              ||||||||||||||||||||
Sbjct: 129964 ttcagaaacattagataaat 129983



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     ttcagaaacattagataaat 36
              ||||||||||||||||||||
Sbjct: 129964 ttcagaaacattagataaat 129983

---

>gb|AF432069.1| Listeria monocytogenes PrfA regulated bile exclusion system operon,
            complete sequence
          Length = 2640

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 105  aaacattagataaatatcca 124
            ||||||||||||||||||||
Sbjct: 2447 aaacattagataaatatcca 2466

---

>dbj|AP003057.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-382M14, complete
             sequences
          Length = 190462

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   atatccaacttataattgaa 137
             ||||||||||||||||||||
Sbjct: 68939 atatccaacttataattgaa 68920

---

>gb|AC163695.2| Ornithorhynchus anatinus BAC clone OABb-35L5 from chromosome unknown,
             complete sequence
          Length = 89299

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 48    tattgaaattcttgattcaa 67
             ||||||||||||||||||||
Sbjct: 25068 tattgaaattcttgattcaa 25049

---

>gb|AC130537.4| Mus musculus BAC clone RP23-412D3 from 8, complete sequence
          Length = 194088

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    tgctgaaataagaggcttat 237
              ||||||||||||||||||||
Sbjct: 187841 tgctgaaataagaggcttat 187822

---

>gb|AY285487.1| Sus scrofa clone UMNp764.gcg microsatellite sequence
          Length = 657

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 17  ttcagaaacattagataaat 36
           ||||||||||||||||||||
Sbjct: 655 ttcagaaacattagataaat 636



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 100 ttcagaaacattagataaat 119
           ||||||||||||||||||||
Sbjct: 655 ttcagaaacattagataaat 636

---

>emb|AL844537.5| Mouse DNA sequence from clone RP23-448A16 on chromosome 2, complete
             sequence
          Length = 185541

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 167   tcctatatacaatgagcttattat 190
             ||||||||||||||| ||||||||
Sbjct: 58361 tcctatatacaatgatcttattat 58338

---

>emb|AL732477.10| Mouse DNA sequence from clone RP23-393E8 on chromosome 2, complete
              sequence
          Length = 187993

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 127    ttataattgaaaaatcttga 146
              ||||||||||||||||||||
Sbjct: 155750 ttataattgaaaaatcttga 155731

---

>gb|L23109.1|STASINA Staphylococcus aureus recombinase (sin) gene, complete cds
          Length = 1805

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   cttcagaaacattagataaa 118
            ||||||||||||||||||||
Sbjct: 1316 cttcagaaacattagataaa 1335



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   cttcagaaacattagataaa 35
            ||||||||||||||||||||
Sbjct: 1316 cttcagaaacattagataaa 1335

---

>dbj|D50418.1|MUSAREC3C Mouse mRNA for AREC3, partial cds
          Length = 5659

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  gctgtaggaggtggtggctg 300
            ||||||||||||||||||||
Sbjct: 1127 gctgtaggaggtggtggctg 1108

---

>dbj|D50417.1|MUSAREC3B Mouse mRNA for AREC3, partial cds
          Length = 1955

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  gctgtaggaggtggtggctg 300
            ||||||||||||||||||||
Sbjct: 1269 gctgtaggaggtggtggctg 1250

---

>dbj|D50416.1|MUSAREC3A Mouse mRNA for AREC3, complete cds
          Length = 5566

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 281  gctgtaggaggtggtggctg 300
            ||||||||||||||||||||
Sbjct: 1354 gctgtaggaggtggtggctg 1335


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,941,797
Number of Sequences: 3902068
Number of extensions: 3941797
Number of successful extensions: 81227
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81039
Number of HSP's gapped (non-prelim): 188
length of query: 377
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 355
effective length of database: 17,147,199,772
effective search space: 6087255919060
effective search space used: 6087255919060
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---