ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal41f08 |
|---|---|
| Clone Library Name | barley_pub |
>CT160_HUMAN (Q9NUG4) Protein C20orf160| Length = 571 Score = 35.8 bits (81), Expect = 0.065 Identities = 26/68 (38%), Positives = 32/68 (47%) Frame = -2 Query: 207 GSPGSLELIKASLMADGGIRRKRAFVLGGSRDKLVPGMGSMV*QKANGGLGKEGEAWAGR 28 G GSLE +A A G R++ F GS ++ G G GG GK G +W R Sbjct: 219 GGGGSLERQRAGARASGSWERRQTF--SGSWERRHGGGGG------GGGAGKPGGSWE-R 269 Query: 27 RHQGYGGG 4 R G GGG Sbjct: 270 RQAGSGGG 277
>SRA_DROME (Q9XZL8) Protein sarah (Protein nebula)| Length = 292 Score = 34.3 bits (77), Expect = 0.19 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = +2 Query: 53 FPKPPLAFCYTMEPI-PGTNLSREPPRTKALFLLMPPSAMSEALISSKLPGDPLQLHEMR 229 F K + CY +P+ P +N + +PP FL+ PP A A + G+PL H++ Sbjct: 181 FNKKTVITCYFAQPVTPVSNKNLQPPAPVKQFLISPP-ASPPAGWEPREEGEPLVNHDLL 239 Query: 230 SILVSM 247 + L S+ Sbjct: 240 AALASL 245
>SCNNA_BOVIN (P55270) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 650 Score = 31.2 bits (69), Expect = 1.6 Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = +2 Query: 32 PAQASPSFPKPPLAFCYTMEPIPGTN--LSREPPRTKALFLLMPPSAMSEALISSKLPGD 205 PA + PS P AF + P P + LS PP L PS ++EA S+ PG+ Sbjct: 590 PAASLPSSFCPHPAFFSSSPPDPAISPALSAPPPAYATLGPHPAPSGLAEASTSAHAPGE 649 Query: 206 P 208 P Sbjct: 650 P 650
>CD2L7_HUMAN (Q9NYV4) Cell division cycle 2-related protein kinase 7 (EC| 2.7.11.22) (CDC2-related protein kinase 7) (Cdc2-related kinase, arginine/serine-rich) (CrkRS) Length = 1490 Score = 31.2 bits (69), Expect = 1.6 Identities = 24/106 (22%), Positives = 37/106 (34%) Frame = +2 Query: 5 PPPYP*CLRPAQASPSFPKPPLAFCYTMEPIPGTNLSREPPRTKALFLLMPPSAMSEALI 184 PPP P P Q P P PP+ P+P + + + L P + + + Sbjct: 536 PPPLPTTTPPPQTPPLPPLPPIPALPQQPPLPPSQPAFSQVPASSTSTLPPSTHSKTSAV 595 Query: 185 SSKLPGDPLQLHEMRSILVSMPVYRAWRTTHPSAGNSRRSPASIPP 322 SS+ P + VS+ + P S P +PP Sbjct: 596 SSQANSQP-------PVQVSVKTQVSVTAAIPHLKTSTLPPLPLPP 634
>FA98A_RAT (Q5FWT1) Protein FAM98A| Length = 515 Score = 30.8 bits (68), Expect = 2.1 Identities = 16/52 (30%), Positives = 22/52 (42%) Frame = -2 Query: 159 GGIRRKRAFVLGGSRDKLVPGMGSMV*QKANGGLGKEGEAWAGRRHQGYGGG 4 GG ++ + GG + G G + GG G +G W GR Q Y G Sbjct: 437 GGYQQDNRYQDGGHHGERGSGRGGRGGRGGRGGRGSQGGGWGGRGSQTYHQG 488
>FA98A_MOUSE (Q3TJZ6) Protein FAM98A| Length = 515 Score = 30.8 bits (68), Expect = 2.1 Identities = 16/52 (30%), Positives = 22/52 (42%) Frame = -2 Query: 159 GGIRRKRAFVLGGSRDKLVPGMGSMV*QKANGGLGKEGEAWAGRRHQGYGGG 4 GG ++ + GG + G G + GG G +G W GR Q Y G Sbjct: 437 GGYQQDNRYQDGGHHGERGSGRGGRGGRGGRGGRGSQGGGWGGRGSQTYHQG 488
>TRPE_MYCTU (P67001) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 516 Score = 30.4 bits (67), Expect = 2.7 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%) Frame = +2 Query: 89 EPIPGT--NLSREPPRTKALFLLMPPSAMSEALISSKLPGD-----PLQLHEMRSILVSM 247 +P+P T SR PR +A + A+ E L+ G+ P Q EM + + + Sbjct: 211 QPLPSTVATFSRPEPRHRAQRTVEEYGAIVEYLVDQIAAGEAFQVVPSQRFEMDTDVDPI 270 Query: 248 PVYRAWRTTHPS 283 VYR R T+PS Sbjct: 271 DVYRILRVTNPS 282
>TRPE_MYCBO (P67002) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 516 Score = 30.4 bits (67), Expect = 2.7 Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%) Frame = +2 Query: 89 EPIPGT--NLSREPPRTKALFLLMPPSAMSEALISSKLPGD-----PLQLHEMRSILVSM 247 +P+P T SR PR +A + A+ E L+ G+ P Q EM + + + Sbjct: 211 QPLPSTVATFSRPEPRHRAQRTVEEYGAIVEYLVDQIAAGEAFQVVPSQRFEMDTDVDPI 270 Query: 248 PVYRAWRTTHPS 283 VYR R T+PS Sbjct: 271 DVYRILRVTNPS 282
>YHS4_CAEEL (O18303) Hypothetical protein ZK849.4 in chromosome I| Length = 602 Score = 30.4 bits (67), Expect = 2.7 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +2 Query: 2 RPPPYP*CLRPAQASPSFPKPPLAFCYTMEPIPGTNLSREPPR 130 RPPP P L PA +P+ P PP P P L + PR Sbjct: 482 RPPPSPPALPPALPNPNEPPPP--------PPPAEALRADQPR 516
>IF2_MYCPA (Q73VV4) Translation initiation factor IF-2| Length = 925 Score = 30.0 bits (66), Expect = 3.6 Identities = 28/105 (26%), Positives = 40/105 (38%) Frame = +2 Query: 11 PYP*CLRPAQASPSFPKPPLAFCYTMEPIPGTNLSREPPRTKALFLLMPPSAMSEALISS 190 P P RP+ +P PKP P PG +PPR A P A A + Sbjct: 130 PGPAAARPSAPAPGQPKP---------PAPG-----QPPRPGATPGPRPGPAPKPAARTP 175 Query: 191 KLPGDPLQLHEMRSILVSMPVYRAWRTTHPSAGNSRRSPASIPPK 325 ++ +P + + PV R P A SP ++PP+ Sbjct: 176 RVGNNPFSSAQPVDRPIPRPVPRP-GAPRPGAPRPGASPGNMPPR 219
>DOS_MOUSE (Q66L44) Protein Dos (Downstream of Stk11 protein) (Fragment)| Length = 552 Score = 29.6 bits (65), Expect = 4.7 Identities = 27/103 (26%), Positives = 39/103 (37%) Frame = +2 Query: 5 PPPYP*CLRPAQASPSFPKPPLAFCYTMEPIPGTNLSREPPRTKALFLLMPPSAMSEALI 184 PPP RP ASP+ P P L E G S E P + L + + Sbjct: 214 PPP-----RPFLASPTSPPPTLGRLEAAEAAGGA--SPETPPEHGISLGPEHAQQQDPQQ 266 Query: 185 SSKLPGDPLQLHEMRSILVSMPVYRAWRTTHPSAGNSRRSPAS 313 ++ S+ S+ ++ A + H S+GN R S S Sbjct: 267 EQDAEHAQCSYRDLWSLRASLELHAATASDHSSSGNDRDSVRS 309
>TAB3_XENLA (Q7ZXH3) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 3 homolog Length = 692 Score = 29.3 bits (64), Expect = 6.1 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 10/79 (12%) Frame = +2 Query: 8 PPYP*CLRPAQASP--------SFPKPPLAFCYT--MEPIPGTNLSREPPRTKALFLLMP 157 PPYP +P Q SP +F PP + C + P ++ +T +FL Sbjct: 245 PPYPQSFQPTQYSPKQPQIPQSAFRSPPTSQCTSPYSSPQHQVQTNQLSHQTSHVFLPPS 304 Query: 158 PSAMSEALISSKLPGDPLQ 214 PS +S L P P Q Sbjct: 305 PSTVSPHLYQQAPPPYPKQ 323
>BRD4_HUMAN (O60885) Bromodomain-containing protein 4 (HUNK1 protein)| Length = 1362 Score = 29.3 bits (64), Expect = 6.1 Identities = 32/117 (27%), Positives = 45/117 (38%), Gaps = 8/117 (6%) Frame = +2 Query: 5 PPPYP*CLRPAQASPSFPKPPLAFCYTMEPI-----PGTNLSREPPRTKALFLLMPPSAM 169 PPP P P QA+P+ P F T P+ PG+ T+ + L P Sbjct: 777 PPPPPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLPGSVFDPIGHFTQPILHLPQPE-- 834 Query: 170 SEALISSKLPGDP---LQLHEMRSILVSMPVYRAWRTTHPSAGNSRRSPASIPPKRA 331 + LP P H + +VS P PS ++R A++PPK A Sbjct: 835 ----LPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNR--AAALPPKPA 885
>YA745_GIBZE (Q4HWB3) Hypothetical protein FG10745| Length = 351 Score = 29.3 bits (64), Expect = 6.1 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 2/96 (2%) Frame = +2 Query: 38 QASPSFPKPPLAFCYTMEPIPGTNLSREPPRTKALFLLMPPSAMSEALISSKLPGDPLQL 217 Q PS P+P L + P+ N P T L PP + E L+ + P+ Sbjct: 100 QQQPSLPEPLLDLLIVLPPLLDANNPPLPQDTLQLLFAHPPLSELETLLPALA---PIIA 156 Query: 218 HEMRSILVSMPVYRAWRTTHPSAGNS--RRSPASIP 319 +R+ + + R HPS S R AS+P Sbjct: 157 SNLRTWALGLA-----RIAHPSTNASFLHRHIASLP 187
>RFX1_MOUSE (P48377) DNA-binding protein RFX1| Length = 963 Score = 28.9 bits (63), Expect = 7.9 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 5/111 (4%) Frame = +2 Query: 2 RPPPYP*CLRPAQASPSFPKPPLAFCYTMEPIPGTNL-----SREPPRTKALFLLMPPSA 166 +PP P P P+ P+PP A T +P T L +PP ++ ++ P+A Sbjct: 18 QPPQAPPQALPQPPPPAAPQPPAA--ATPQPQYVTELQSPQPQTQPPGSQKQYVAELPAA 75 Query: 167 MSEALISSKLPGDPLQLHEMRSILVSMPVYRAWRTTHPSAGNSRRSPASIP 319 + + ++ P Q + + + VS RA T ++ +S S +P Sbjct: 76 PAPSQPATPAPSPVAQQYIV--VTVSEGAMRASETVSEASPSSTASQTGVP 124
>SYI_THEFY (Q47QV9) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 1060 Score = 28.9 bits (63), Expect = 7.9 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = -1 Query: 364 GDLLSVXLPPQ-RALGRNRGRTPARIACARVRRPPSSIDRHAHEDGPHLMELEGVTRKLR 188 GDL+ + P RALG+ G+T R+A A ++ D ++++G L Sbjct: 882 GDLVDYSVKPNFRALGKRFGKTTPRVAQAIREADAKTLVERLRADNAATVDVDGEQVVLS 941 Query: 187 ADQ 179 AD+ Sbjct: 942 ADE 944
>WBP11_RAT (Q5PQQ2) WW domain-binding protein 11 (Wbp-11)| Length = 641 Score = 28.9 bits (63), Expect = 7.9 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +2 Query: 5 PPPYP*CLRPAQASPSFPKPPLAFCYTMEPIPGTNLSREPP 127 PPP P +RP P P PP F P+P + PP Sbjct: 500 PPPRPGMMRPPLVPPLGPAPPGLF--PPAPLPNPGVLSAPP 538
>WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)| Length = 641 Score = 28.9 bits (63), Expect = 7.9 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +2 Query: 5 PPPYP*CLRPAQASPSFPKPPLAFCYTMEPIPGTNLSREPP 127 PPP P +RP P P PP F P+P + PP Sbjct: 500 PPPRPGMMRPPLVPPLGPAPPGLF--PPAPLPNPGVLSAPP 538
>WBP11_HUMAN (Q9Y2W2) WW domain-binding protein 11 (WBP-11) (SH3 domain-binding| protein SNP70) (Npw38-binding protein) (NpwBP) Length = 641 Score = 28.9 bits (63), Expect = 7.9 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +2 Query: 5 PPPYP*CLRPAQASPSFPKPPLAFCYTMEPIPGTNLSREPP 127 PPP P +RP P P PP F P+P + PP Sbjct: 500 PPPRPGMMRPPLVPPLGPAPPGLF--PPAPLPNPGVLSAPP 538
>TRPE_MYCLE (Q9X7C5) Anthranilate synthase component 1 (EC 4.1.3.27)| (Anthranilate synthase component I) Length = 529 Score = 28.9 bits (63), Expect = 7.9 Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 7/72 (9%) Frame = +2 Query: 89 EPIPGT--NLSREPPRTKALFLLMPPSAMSEALISSKLPGD-----PLQLHEMRSILVSM 247 +P+P T SR PR +A + A+ + L+ G+ P Q E+ + + + Sbjct: 208 QPLPSTIATFSRPDPRRRAQCTIEEYGAIVDHLVDQIAAGEAFQVVPSQRFEVDTDVDPI 267 Query: 248 PVYRAWRTTHPS 283 VYR R T+PS Sbjct: 268 DVYRMLRVTNPS 279 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,323,452 Number of Sequences: 219361 Number of extensions: 1659795 Number of successful extensions: 5367 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 4955 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5347 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
