ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal41e22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_469907.1| Oryza sativa (japonica cultivar-group), mRNA Length = 542 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 287 tcctctccaactccgaggacacggtgtgcatgctcatggaccgcttttccccggcctga 345 |||||||| ||||||||| ||| ||||||||||||||||||||||| |||| |||||| Sbjct: 287 tcctctccgactccgaggccaccgtgtgcatgctcatggaccgcttcgcccctgcctga 345
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 287 tcctctccaactccgaggacacggtgtgcatgctcatggaccgcttttccccggcctga 345 |||||||| ||||||||| ||| ||||||||||||||||||||||| |||| |||||| Sbjct: 31454423 tcctctccgactccgaggccaccgtgtgcatgctcatggaccgcttcgcccctgcctga 31454481 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gtgcagatccaggagaggaggaggagga 277 |||| |||| |||||||||||||||||| Sbjct: 27301316 gtgcggatcgaggagaggaggaggagga 27301343 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 14810009 caggagaggaggaggaggaa 14810028
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 287 tcctctccaactccgaggacacggtgtgcatgctcatggaccgcttttccccggcctga 345 |||||||| ||||||||| ||| ||||||||||||||||||||||| |||| |||||| Sbjct: 41377 tcctctccgactccgaggccaccgtgtgcatgctcatggaccgcttcgcccctgcctga 41319
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 287 tcctctccaactccgaggacacggtgtgcatgctcatggaccgcttttccccggcctga 345 |||||||| ||||||||| ||| ||||||||||||||||||||||| |||| |||||| Sbjct: 31544939 tcctctccgactccgaggccaccgtgtgcatgctcatggaccgcttcgcccctgcctga 31544997 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gtgcagatccaggagaggaggaggagga 277 |||| |||| |||||||||||||||||| Sbjct: 27392639 gtgcggatcgaggagaggaggaggagga 27392666 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 14804543 caggagaggaggaggaggaa 14804562
>dbj|AK120228.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042P21, full insert sequence Length = 561 Score = 69.9 bits (35), Expect = 9e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 287 tcctctccaactccgaggacacggtgtgcatgctcatggaccgcttttccccggcctga 345 |||||||| ||||||||| ||| ||||||||||||||||||||||| |||| |||||| Sbjct: 308 tcctctccgactccgaggccaccgtgtgcatgctcatggaccgcttcgcccctgcctga 366
>emb|AL807247.10| Mouse DNA sequence from clone RP23-178D3 on chromosome 4, complete sequence Length = 184686 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 261 ggagaggaggaggaggaacagcagc 285 ||||||||||||||||||||||||| Sbjct: 72553 ggagaggaggaggaggaacagcagc 72529
>gb|AC126283.3| Homo sapiens BAC clone RP11-602N24 from 4, complete sequence Length = 118642 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 263 agaggaggaggaggaacagcagc 285 ||||||||||||||||||||||| Sbjct: 24655 agaggaggaggaggaacagcagc 24677
>gb|AC136636.6| Mus musculus BAC clone RP24-183E22 from chromosome 1, complete sequence Length = 182542 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 263 agaggaggaggaggaacagcagc 285 ||||||||||||||||||||||| Sbjct: 107808 agaggaggaggaggaacagcagc 107786
>gb|AC122193.5| Mus musculus BAC clone RP23-45G16 from 6, complete sequence Length = 211512 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 263 agaggaggaggaggaacagcagc 285 ||||||||||||||||||||||| Sbjct: 197060 agaggaggaggaggaacagcagc 197082
>gb|AC140287.3| Mus musculus BAC clone RP23-346L16 from 6, complete sequence Length = 213473 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 263 agaggaggaggaggaacagcagc 285 ||||||||||||||||||||||| Sbjct: 138035 agaggaggaggaggaacagcagc 138013
>gb|AC126450.4| Mus musculus BAC clone RP23-379J7 from 3, complete sequence Length = 159914 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 263 agaggaggaggaggaacagcagc 285 ||||||||||||||||||||||| Sbjct: 143310 agaggaggaggaggaacagcagc 143288 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 263 agaggaggaggaggaacagcagc 285 ||||||||||||||||||||||| Sbjct: 143004 agaggaggaggaggaacagcagc 142982 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 263 agaggaggaggaggaacagcagc 285 ||||||||||||||||||||||| Sbjct: 142774 agaggaggaggaggaacagcagc 142752 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 263 agaggaggaggaggaacagcagc 285 ||||||||||||||||||||||| Sbjct: 142636 agaggaggaggaggaacagcagc 142614 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 143382 gaggaggaggaggaacagcagc 143361 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 aggaggaggaggaacagcagc 285 ||||||||||||||||||||| Sbjct: 143533 aggaggaggaggaacagcagc 143513
>gb|AC102081.15| Mus musculus chromosome 18, clone RP23-43H5, complete sequence Length = 245125 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 214584 gaggaggaggaggaacagcagc 214563
>gb|AC159201.2| Mus musculus BAC clone RP23-340E6 from chromosome 13, complete sequence Length = 187967 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 260 aggagaggaggaggaggaacagcagc 285 ||||||||||||||||||| |||||| Sbjct: 165647 aggagaggaggaggaggaaaagcagc 165672
>gb|AC120308.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0070D17 map G44, complete sequence Length = 135627 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 aggagaggaggaggaggaacag 281 |||||||||||||||||||||| Sbjct: 96639 aggagaggaggaggaggaacag 96660
>gb|AC136004.10| Mus musculus chromosome 7, clone RP23-235M8, complete sequence Length = 185174 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 112985 gaggaggaggaggaacagcagc 112964
>gb|AC138654.4| Mus musculus BAC clone RP23-344O11 from chromosome 5, complete sequence Length = 198036 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 142430 gaggaggaggaggaacagcagc 142451
>gb|DQ483969.1| Gymnogyps californianus clone 135G microsatellite sequence Length = 511 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 440 gaggaggaggaggaacagcagc 419
>gb|AC097354.12| Mus musculus strain 129/Sv clone ct7-297f7 map X, complete sequence Length = 242318 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 100480 gaggaggaggaggaacagcagc 100459
>gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219585 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 123438 gaggaggaggaggaacagcagc 123459
>gb|AC162361.7| Mus musculus chromosome 7, clone RP23-177P20, complete sequence Length = 230870 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 197424 gaggaggaggaggaacagcagc 197403
>emb|AL353700.14| Human DNA sequence from clone RP3-350J21 on chromosome 6 Contains part of the DNAH8 gene for dynein axonemal heavy polypeptide 8 and the 5' part of a novel gene, complete sequence Length = 56509 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 28667 gaggaggaggaggaacagcagc 28688
>emb|AL132766.13|HSJ433F14 Human DNA sequence from clone RP3-433F14 on chromosome 6q15-16.3 Contains a pseudogene similar to part of mitochondrial cytochrome C oxidase I and a pseudogene similar to part of NADH dehydrogenase 4L (MTND4L), complete sequence Length = 144984 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 415 gttcctgttgtacataagctcc 436 |||||||||||||||||||||| Sbjct: 101719 gttcctgttgtacataagctcc 101698
>gb|AC163635.5| Mus musculus BAC clone RP23-183F13 from chromosome 17, complete sequence Length = 185844 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 73584 gaggaggaggaggaacagcagc 73563
>gb|AC165262.2| Mus musculus BAC clone RP23-89H5 from chromosome 14, complete sequence Length = 201412 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 171092 gaggaggaggaggaacagcagc 171071
>dbj|AB040292.1| Mus musculus Mtch1 gene for mitochondiral carrier homolog 1 isoform a and b, complete cds Length = 21984 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 19662 gaggaggaggaggaacagcagc 19683
>gb|AC162182.2| Mus musculus BAC clone RP23-73B23 from chromosome 17, complete sequence Length = 205221 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 66744 gaggaggaggaggaacagcagc 66765
>gb|AC111017.23| Mus musculus chromosome 13, clone RP23-62F4, complete sequence Length = 239344 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 260 aggagaggaggaggaggaacagcagc 285 ||||||||||||||||||| |||||| Sbjct: 17413 aggagaggaggaggaggaaaagcagc 17438
>gb|BC029723.1| Mus musculus mitochondrial carrier homolog 1 (C. elegans), mRNA (cDNA clone IMAGE:5035572), with apparent retained intron Length = 2298 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 894 gaggaggaggaggaacagcagc 915
>gb|AC156949.9| Mus musculus 10 BAC RP24-347J14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 149183 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 8467 gaggaggaggaggaacagcagc 8488
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 aggagaggaggaggaggaacag 281 |||||||||||||||||||||| Sbjct: 9828280 aggagaggaggaggaggaacag 9828301
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 aggagaggaggaggaggaacagcagc 285 |||||||||||||||||| ||||||| Sbjct: 13585798 aggagaggaggaggaggagcagcagc 13585773 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 17797840 caggagaggaggaggaggaa 17797859
>gb|AC098858.3| Homo sapiens BAC clone RP11-149A7 from 4, complete sequence Length = 172419 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 260 aggagaggaggaggaggaacag 281 |||||||||||||||||||||| Sbjct: 13301 aggagaggaggaggaggaacag 13280
>gb|AC155938.6| Mus musculus 10 BAC RP24-421D7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 157047 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 138011 gaggaggaggaggaacagcagc 137990
>dbj|AP006453.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1339H09 Length = 131136 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 aggagaggaggaggaggaacagcagc 285 |||||||||||||||||| ||||||| Sbjct: 23214 aggagaggaggaggaggagcagcagc 23189
>dbj|AP007149.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, fosmid clone:OSJNOa018M17 Length = 36758 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Minus Query: 260 aggagaggaggaggaggaacagcagc 285 |||||||||||||||||| ||||||| Sbjct: 33784 aggagaggaggaggaggagcagcagc 33759
>gb|AC154206.2| Mus musculus BAC clone RP24-104P20 from 14, complete sequence Length = 167116 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 61926 gaggaggaggaggaacagcagc 61947
>gb|AC153824.9| Mus musculus 10 BAC RP23-53D13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 233119 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 124814 gaggaggaggaggaacagcagc 124835
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 aggagaggaggaggaggaacag 281 |||||||||||||||||||||| Sbjct: 9899977 aggagaggaggaggaggaacag 9899998
>gb|AC140416.2| Mus musculus BAC clone RP24-347A16 from 6, complete sequence Length = 188390 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 152921 gaggaggaggaggaacagcagc 152942
>gb|AC130535.4| Mus musculus BAC clone RP23-326O2 from 5, complete sequence Length = 193752 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 98852 gaggaggaggaggaacagcagc 98831
>emb|AL731893.11| Mouse DNA sequence from clone RP23-134C8 on chromosome X, complete sequence Length = 139552 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 130926 gaggaggaggaggaacagcagc 130905
>emb|AL671854.14| Mouse DNA sequence from clone RP23-89M15 on chromosome 3, complete sequence Length = 207265 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcagc 285 |||||||||||||||||||||| Sbjct: 10642 gaggaggaggaggaacagcagc 10621
>ref|XM_416218.1| PREDICTED: Gallus gallus similar to transcription factor 20 isoform 1; stromelysin-1 platelet-derived growth factor-responsive element binding protein; stromelysin 1 PDGF-responsive element-binding protein; SPRE-binding protein; nuclear factor SPBP (LOC417980), mRNA Length = 5948 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 agaggaggaggaggaacagca 283 ||||||||||||||||||||| Sbjct: 5339 agaggaggaggaggaacagca 5359
>ref|NM_018023.3| Homo sapiens YEATS domain containing 2 (YEATS2), mRNA Length = 6501 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcag 284 ||||||||||||||||||||| Sbjct: 2666 gaggaggaggaggaacagcag 2686
>gb|AC123751.6| Mus musculus chromosome 8, clone RP24-187F1, complete sequence Length = 159523 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 261 ggagaggaggaggaggaacagcagc 285 ||||||||||||||||| ||||||| Sbjct: 107656 ggagaggaggaggaggagcagcagc 107680
>gb|DQ483989.1| Gymnogyps californianus clone 155G microsatellite sequence Length = 593 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcag 284 ||||||||||||||||||||| Sbjct: 42 gaggaggaggaggaacagcag 22
>gb|BC043393.1| Homo sapiens YEATS domain containing 2, mRNA (cDNA clone IMAGE:5498791) Length = 3918 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcag 284 ||||||||||||||||||||| Sbjct: 617 gaggaggaggaggaacagcag 637
>emb|AL442203.12| Human DNA sequence from clone RP11-12I24 on chromosome 13 Contains the 5' end of a novel gene (contains KIAA0564 and FLJ21779) possible ortholog of RIKEN cDNA 1300010F03 gene, a lysyl-tRNA synthetase (KARS) pseudogene, a ribosomal protein S28 (RPS28) pseudogene and 2 CpG islands, complete sequence Length = 163511 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 265 aggaggaggaggaacagcagc 285 ||||||||||||||||||||| Sbjct: 32190 aggaggaggaggaacagcagc 32170
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 228 cgaggcggaggccgcgaagacggtg 252 ||||||||||||||||||| ||||| Sbjct: 113362 cgaggcggaggccgcgaaggcggtg 113338 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 gaggccgaggtcgtcggccg 203 |||||||||||||||||||| Sbjct: 3228 gaggccgaggtcgtcggccg 3247
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 184 gaggccgaggtcgtcggccgg 204 ||||||||||||||||||||| Sbjct: 226705 gaggccgaggtcgtcggccgg 226725
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 251 tgcagatccaggagaggaggaggag 275 |||||||||||||||| |||||||| Sbjct: 447766 tgcagatccaggagagaaggaggag 447742
>gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, complete sequence Length = 179145 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 260 aggagaggaggaggaggaacagcag 284 |||||||||||||||||| |||||| Sbjct: 116972 aggagaggaggaggaggagcagcag 116948
>gb|AY113304.1| Drosophila melanogaster AT27185 full insert cDNA Length = 3416 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcag 284 ||||||||||||||||||||| Sbjct: 2196 gaggaggaggaggaacagcag 2216
>ref|NM_142121.1| Drosophila melanogaster CG7886-RA (CG7886), mRNA Length = 3439 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcag 284 ||||||||||||||||||||| Sbjct: 2206 gaggaggaggaggaacagcag 2226
>ref|XM_682349.1| PREDICTED: Danio rerio similar to coagulation factor VIII precursor (LOC559047), partial mRNA Length = 2110 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ggagaggaggaggaggaacag 281 ||||||||||||||||||||| Sbjct: 33 ggagaggaggaggaggaacag 13
>gb|AC007809.8|AC007809 Drosophila melanogaster, chromosome 3R, region 88C-88C, BAC clone BACR45M03, complete sequence Length = 183439 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcag 284 ||||||||||||||||||||| Sbjct: 107541 gaggaggaggaggaacagcag 107521
>gb|AC153556.5| Mus musculus 10 BAC RP23-395M5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184751 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcag 284 ||||||||||||||||||||| Sbjct: 63171 gaggaggaggaggaacagcag 63191
>gb|AC008403.8| Homo sapiens chromosome 19 clone CTC-273B12, complete sequence Length = 190076 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaac 279 ||||||||||||||||||||| Sbjct: 85700 caggagaggaggaggaggaac 85680
>gb|AC068769.19| Homo sapiens 3 BAC RP11-14I2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191246 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcag 284 ||||||||||||||||||||| Sbjct: 17635 gaggaggaggaggaacagcag 17615
>gb|AC119939.14| Mus musculus chromosome 5, clone RP24-267A23, complete sequence Length = 180700 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcag 284 ||||||||||||||||||||| Sbjct: 155543 gaggaggaggaggaacagcag 155523
>gb|AC002477.1|AC002477 Human PAC clone RP3-327A19 from Xq25-q26, complete sequence Length = 124095 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 gggcagggaggctgcgccggc 179 ||||||||||||||||||||| Sbjct: 64709 gggcagggaggctgcgccggc 64689
>ref|XM_312230.2| Anopheles gambiae str. PEST ENSANGP00000010757 (ENSANGG00000008268), partial mRNA Length = 6909 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 agaggaggaggaggaacagca 283 ||||||||||||||||||||| Sbjct: 4275 agaggaggaggaggaacagca 4295
>gb|AC155931.2| Mus musculus BAC clone RP23-289D4 from 9, complete sequence Length = 189845 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ggagaggaggaggaggaacag 281 ||||||||||||||||||||| Sbjct: 945 ggagaggaggaggaggaacag 925
>gb|AC133197.3| Mus musculus BAC clone RP23-228E15 from 8, complete sequence Length = 197899 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 261 ggagaggaggaggaggaacagcagc 285 ||||||||||||||||| ||||||| Sbjct: 69052 ggagaggaggaggaggagcagcagc 69076
>gb|AE003705.3| Drosophila melanogaster chromosome 3R, section 43 of 118 of the complete sequence Length = 216741 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcag 284 ||||||||||||||||||||| Sbjct: 147272 gaggaggaggaggaacagcag 147252
>gb|AC122433.5| Mus musculus BAC clone RP24-194G3 from chromosome 1, complete sequence Length = 170341 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 agaggaggaggaggaacagca 283 ||||||||||||||||||||| Sbjct: 35210 agaggaggaggaggaacagca 35190
>emb|CT030730.7| Mouse DNA sequence from clone RP24-252L17 on chromosome 9, complete sequence Length = 151456 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ggagaggaggaggaggaacag 281 ||||||||||||||||||||| Sbjct: 94251 ggagaggaggaggaggaacag 94231
>gb|AC124539.4| Mus musculus BAC clone RP23-359M14 from chromosome 12, complete sequence Length = 183684 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 tttgaatggattgtttggttt 561 ||||||||||||||||||||| Sbjct: 100574 tttgaatggattgtttggttt 100554
>emb|AJ132597.1|DME132597 Drosophila melanogaster H4r gene,3'-flanking region, 20000 BP Length = 20000 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagcag 284 ||||||||||||||||||||| Sbjct: 3874 gaggaggaggaggaacagcag 3854
>dbj|AB033023.1| Homo sapiens mRNA for KIAA1197 protein, partial cds Length = 6501 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagcag 284 ||||||||||||||||||||| Sbjct: 2666 gaggaggaggaggaacagcag 2686
>gb|AC114666.31| Mus musculus chromosome 5, clone RP24-175N6, complete sequence Length = 193158 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cttcttttccagtccagcga 89 |||||||||||||||||||| Sbjct: 182250 cttcttttccagtccagcga 182231
>gb|AC129583.15| Mus musculus chromosome 15, clone RP23-197P10, complete sequence Length = 206094 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 116982 gaggaggaggaggaacagca 116963
>gb|AC153490.1| Mus musculus BAC RP23-210M12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 145026 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 129703 caggagaggaggaggaggaa 129684
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gcgccggcggcagaggccga 191 |||||||||||||||||||| Sbjct: 89770 gcgccggcggcagaggccga 89789
>gb|AC123932.4| Mus musculus chromosome 12 clone RP23-310F15, complete sequence Length = 163312 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggagaggaggaggaggaaca 280 |||||||||||||||||||| Sbjct: 72938 ggagaggaggaggaggaaca 72919
>ref|XM_470732.1| Oryza sativa (japonica cultivar-group), mRNA Length = 384 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 347 caggagaggaggaggaggaa 366
>gb|AC164075.4| Mus musculus chromosome 7, clone RP24-259P13, complete sequence Length = 159578 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 87191 caggagaggaggaggaggaa 87172
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 caagcagtgaaagagaggaa 49 |||||||||||||||||||| Sbjct: 1658809 caagcagtgaaagagaggaa 1658828
>gb|AC159439.1| Trypanosoma brucei chromosome 7 clone RPCI93-2F2, complete sequence Length = 134290 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 caagcagtgaaagagaggaa 49 |||||||||||||||||||| Sbjct: 75116 caagcagtgaaagagaggaa 75135
>gb|AF527956.2| Danio rerio cortactin mRNA, complete cds Length = 1838 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 aggaggaggaggaacagcagcgtc 288 ||||||||||||| |||||||||| Sbjct: 1155 aggaggaggaggagcagcagcgtc 1178
>gb|AC097277.6| Oryza sativa chromosome 3 BAC OSJNBa0022C08 genomic sequence, complete sequence Length = 150155 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 250 gtgcagatccaggagaggaggaggagga 277 |||| |||| |||||||||||||||||| Sbjct: 3079 gtgcggatcgaggagaggaggaggagga 3052
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 gtgcagatccaggagaggaggaggagga 277 |||| |||| |||||||||||||||||| Sbjct: 1523 gtgcggatcgaggagaggaggaggagga 1550
>ref|NM_001004121.1| Danio rerio cortactin (cttn), mRNA Length = 1838 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 aggaggaggaggaacagcagcgtc 288 ||||||||||||| |||||||||| Sbjct: 1155 aggaggaggaggagcagcagcgtc 1178
>ref|XM_951809.1| Neurospora crassa OR74A hypothetical protein (NCU01696.1) partial mRNA Length = 2454 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 1081 gaggaggaggaggaacagca 1062
>ref|XM_328134.1| Neurospora crassa OR74A hypothetical protein (NCU01696.1) partial mRNA Length = 2454 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 1081 gaggaggaggaggaacagca 1062
>gb|AC112789.4| Mus musculus BAC clone RP23-151J21 from chromosome 7, complete sequence Length = 200592 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 91987 gaggaggaggaggaacagca 91968
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 254 agatccaggagaggaggaggagga 277 ||||| |||||||||||||||||| Sbjct: 137912 agatcgaggagaggaggaggagga 137889
>gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, complete sequence Length = 159429 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 aggagaggaggaggaggaac 279 |||||||||||||||||||| Sbjct: 79860 aggagaggaggaggaggaac 79879
>gb|AC162894.4| Mus musculus chromosome 3, clone RP23-326A24, complete sequence Length = 187598 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 aggagaggaggaggaggaac 279 |||||||||||||||||||| Sbjct: 121475 aggagaggaggaggaggaac 121494
>gb|BC058640.1| Mus musculus zinc finger protein 710, mRNA (cDNA clone MGC:73501 IMAGE:6835601), complete cds Length = 4361 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 3937 caggagaggaggaggaggaa 3918
>ref|XM_539383.2| PREDICTED: Canis familiaris similar to interferon regulatory factor 5 isoform a (LOC482264), mRNA Length = 1710 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 614 caggagaggaggaggaggaa 633
>gb|AC122256.3| Mus musculus BAC clone RP23-178H7 from 7, complete sequence Length = 183325 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 130459 gaggaggaggaggaacagca 130440
>gb|AC156388.6| Mus musculus 10 BAC RP24-254P7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 174315 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 89771 caggagaggaggaggaggaa 89752
>gb|AC166066.6| Mus musculus 10 BAC RP24-285H2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173920 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 138735 caggagaggaggaggaggaa 138716
>emb|BX001040.14| Human DNA sequence from clone DAQB-72H16 on chromosome 6 Contains HCG26, the gene coding for a transcript for an MHC class I fragment (clone 3.8-1), the MICB gene for MHC class I polypeptide-related sequence B, the PPIP9 peptidylprolyl isomerase (cyclophilin) pseudogene 9, the RPL15P4 ribosomal protein L15 pseudogene 4, the BAT1 gene for HLA-B associated transcript 1, the ATP6V1G2 gene for ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G isoform 2, the 5' end of the NFKBIL1 gene for nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 and two CpG islands, complete sequence Length = 83520 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 8117 ccaggagaggaggaggagga 8136
>emb|BX005439.8| Human DNA sequence from clone DASS-81K16 on chromosome 6, complete sequence Length = 110001 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 61842 ccaggagaggaggaggagga 61861
>emb|AL662866.7| Human DNA sequence from clone XXbac-205D4 on chromosome 6 Contains the gene for MHC class 1 region ORF (P5-1), the MICB gene for MHC class 1 polypeptide-related sequence B, the HCG26 gene for theHLA complex group 26 and two CpG islands, complete sequence Length = 97315 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 60492 ccaggagaggaggaggagga 60511
>emb|AL645933.8| Human DNA sequence from clone XXbac-181B23 on chromosome 6 Contains the MICA gene for MHC class 1 polypeptide-related sequence A, the HCP5 gene for the HLA complex P5, the HCG26, the gene coding for a transcript for an MHC class I fragment (clone 3.8-1)and four CpG islands, complete sequence Length = 111328 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 95697 ccaggagaggaggaggagga 95716
>emb|AL391873.15| Human DNA sequence from clone RP11-399N11 on chromosome 13, complete sequence Length = 161317 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 541 tttgaatggattgtttggtttcta 564 ||||||||||||||||| |||||| Sbjct: 58207 tttgaatggattgtttgctttcta 58230
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 gcgccggcggcagaggccga 191 |||||||||||||||||||| Sbjct: 27913 gcgccggcggcagaggccga 27894
>emb|AL096818.9|HSJ262C15 Human DNA sequence from clone RP1-262C15 on chromosome 6q16.1-21 Contains part of a novel gene, complete sequence Length = 14310 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 3923 caggagaggaggaggaggaa 3942
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgaggtcgtcggccggcgaa 208 |||||||||||||||||||| Sbjct: 120204 cgaggtcgtcggccggcgaa 120185
>emb|AL669869.10| Mouse DNA sequence from clone RP23-198E14 on chromosome 11 Contains the 3' end of the Mgl2 gene for macrophage galactose N-acetyl-galactosamine specific lectin 2, the Mgl1 gene for macrophage galactose N-acetyl-galactosamine specific lectin 1, the gene for a novel RNA polymerase Rpb1 C-terminal repeat domain containing protein, three novel genes, the Bcl6b gene for B-cell CLL/lymphoma 6 member B, the Alox12 gene for arachidonate 12-lipoxygenase and four CpG islands, complete sequence Length = 174390 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggagaggaggaggaggaaca 280 |||||||||||||||||||| Sbjct: 168487 ggagaggaggaggaggaaca 168468
>emb|AL096797.1|SPBC146 S.pombe chromosome II cosmid c146 Length = 33601 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 25850 gaggaggaggaggaacagca 25869
>emb|AL513408.1|NC61D6 Neurospora crassa DNA linkage group II Cosmid clone 61D6 Length = 38848 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 33209 gaggaggaggaggaacagca 33190
>emb|AL355927.1|NCB1D1 Neurospora crassa DNA linkage group II BAC clone B1D1 Length = 76072 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 74724 gaggaggaggaggaacagca 74743
>emb|AJ720502.1| Gallus gallus mRNA for hypothetical protein, clone 19c24 Length = 2654 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 1326 gaggaggaggaggaacagca 1345
>emb|CR933731.5| Mouse DNA sequence from clone DN-160I24 on chromosome 11, complete sequence Length = 212982 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ggagaggaggaggaggaaca 280 |||||||||||||||||||| Sbjct: 148470 ggagaggaggaggaggaaca 148451
>emb|CR753820.15| Human DNA sequence from clone DADB-26I14 on chromosome 6, complete sequence Length = 74851 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 8194 ccaggagaggaggaggagga 8213
>ref|NM_001006237.1| Gallus gallus Ran GTPase activating protein 1 (RANGAP1), mRNA Length = 2654 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 1326 gaggaggaggaggaacagca 1345
>emb|CR753864.4| Human DNA sequence from clone DAMA-BMC190B12 on chromosome 6, complete sequence Length = 82192 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 14356 ccaggagaggaggaggagga 14375
>emb|BX571714.7| Zebrafish DNA sequence from clone DKEY-16L2 in linkage group 3, complete sequence Length = 240105 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ggagaggaggaggaggaacagcag 284 ||||||||||| |||||||||||| Sbjct: 232602 ggagaggaggacgaggaacagcag 232579
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgaggtcgtcggccggcgaa 208 |||||||||||||||||||| Sbjct: 3630948 cgaggtcgtcggccggcgaa 3630929
>dbj|AB236766.1| Trifolium pratense RNA for putative DEAD-box protein abstrakt, complete cds, clone: C1562 Length = 2301 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 cgtgccgaattggcacgagg 20 |||||||||||||||||||| Sbjct: 26 cgtgccgaattggcacgagg 45
>ref|NM_143060.1| Drosophila melanogaster CG13647-RA (CG13647), mRNA Length = 540 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 349 ccaggagaggaggaggagga 368
>ref|NM_142349.2| Drosophila melanogaster CG4060-RA (CG4060), mRNA Length = 1130 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 894 gaggaggaggaggaacagca 913
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 122759 caggagaggaggaggaggaa 122740
>dbj|AK154953.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630112M12 product:Hypothetical zinc finger homolog [Mus musculus], full insert sequence Length = 4443 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 4044 caggagaggaggaggaggaa 4025
>gb|AF329945.1|AF329945 Takifugu rubripes SUN-like 1 (SUNL1), chromosome 17 open reading frame 27 (C17orf27), transcription factor SOX9 (SOX9), and somatostatin receptor 2 (SSTR2) genes, complete cds; and ubiquitin-specific-protease-3-like protein (USP3L) gene, partial cds Length = 194498 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 118937 caggagaggaggaggaggaa 118918
>ref|XM_679701.1| PREDICTED: Danio rerio SRRM2 protein (SRRM2), mRNA Length = 4509 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 ggagaggaggaggaggaacagcag 284 ||||||||||| |||||||||||| Sbjct: 3037 ggagaggaggacgaggaacagcag 3060
>gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome 8, complete sequence Length = 220437 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 128371 caggagaggaggaggaggaa 128390
>dbj|AK033086.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length enriched library, clone:8030403L08 product:unclassifiable, full insert sequence Length = 2497 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 1828 caggagaggaggaggaggaa 1847
>dbj|AK036711.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830165K13 product:hypothetical Zinc finger, C2H2 type containing protein, full insert sequence Length = 3102 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 2702 caggagaggaggaggaggaa 2683
>gb|AC160050.2| Mus musculus BAC clone RP24-467L17 from chromosome 9, complete sequence Length = 158502 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 46945 ccaggagaggaggaggagga 46926
>ref|NM_001021309.1| Schizosaccharomyces pombe 972h- type I myosin (SPBC146.13c), partial mRNA Length = 3654 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 3295 gaggaggaggaggaacagca 3276
>tpg|BK000309.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M28, complete sequence Length = 1221 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 444 caggagaggaggaggaggaa 425
>gb|AC007807.8|AC007807 Drosophila melanogaster, chromosome 3R, region 89E-89E, BAC clone BACR01E04, complete sequence Length = 172674 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 126649 gaggaggaggaggaacagca 126630
>dbj|AK017247.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430400N05 product:unclassifiable, full insert sequence Length = 2115 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 1400 caggagaggaggaggaggaa 1419
>ref|XM_393227.2| PREDICTED: Apis mellifera similar to GA17495-PA (LOC409729), mRNA Length = 7938 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 tgctcgaggcggaggccgcg 243 |||||||||||||||||||| Sbjct: 3224 tgctcgaggcggaggccgcg 3243
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 163 agggaggctgcgccggcggcagaggccgaggt 194 |||||||||||| ||||||| ||||| ||||| Sbjct: 377770 agggaggctgcggcggcggcggaggcggaggt 377801
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 19412122 caggagaggaggaggaggaa 19412141
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 42816841 gaggaggaggaggaacagca 42816860
>gb|AC007853.4|AC007853 Drosophila melanogaster, chromosome 3R, region 96B-96C, BAC clone BACR03L02, complete sequence Length = 162921 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 10796 ccaggagaggaggaggagga 10815
>gb|AC008206.10|AC008206 Drosophila melanogaster, chromosome 3R, region 96B-96B, BAC clone BACR03I15, complete sequence Length = 181132 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 74128 ccaggagaggaggaggagga 74147
>gb|AC007824.5|AC007824 Drosophila melanogaster, chromosome 3R, region 89E-90A, BAC clone BACR02L16, complete sequence Length = 190866 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 67179 gaggaggaggaggaacagca 67160
>gb|AC157660.2| Mus musculus BAC clone RP23-263I16 from chromosome 1, complete sequence Length = 192026 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 actgtattatatcatgtgta 529 |||||||||||||||||||| Sbjct: 126167 actgtattatatcatgtgta 126186
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518C01 Length = 173555 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 10575 gaggaggaggaggaacagca 10594
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region Length = 2229817 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 465279 ccaggagaggaggaggagga 465260
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 29649 caggagaggaggaggaggaa 29668
>gb|AF183909.1|AF183909 Argopecten irradians MHC gene, alternatively spliced products: myosin heavy chain, partial cds and catchin, complete cds Length = 12077 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cctcaagagccttcttttcc 79 |||||||||||||||||||| Sbjct: 982 cctcaagagccttcttttcc 963
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 97613 caggagaggaggaggaggaa 97632
>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1595_D08 Length = 116351 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 38484 caggagaggaggaggaggaa 38503
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0676H02 Length = 144252 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 106474 caggagaggaggaggaggaa 106493
>dbj|AP004462.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0450B04 Length = 153268 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 163 agggaggctgcgccggcggcagaggccgaggt 194 |||||||||||| ||||||| ||||| ||||| Sbjct: 87284 agggaggctgcggcggcggcggaggcggaggt 87315
>gb|AF198552.1|AF198552 Orconectes luteus strain KC112/3 internal transcribed spacer 1, partial sequence Length = 670 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 389 gagaggaggaggaggagcagcagc 366
>gb|AF198551.1|AF198551 Orconectes luteus strain KC112/2 internal transcribed spacer 1, partial sequence Length = 603 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 375 gagaggaggaggaggagcagcagc 352
>gb|AF198549.1|AF198549 Orconectes luteus strain KC25/10 internal transcribed spacer 1, partial sequence Length = 679 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 395 gagaggaggaggaggagcagcagc 372
>gb|AF198548.1|AF198548 Orconectes luteus strain KC25/9 internal transcribed spacer 1, partial sequence Length = 643 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 390 gagaggaggaggaggagcagcagc 367
>gb|AF198547.1|AF198547 Orconectes luteus strain KC25/8 internal transcribed spacer 1, partial sequence Length = 648 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 395 gagaggaggaggaggagcagcagc 372
>gb|AF198546.1|AF198546 Orconectes luteus strain KC25/7 internal transcribed spacer 1, partial sequence Length = 650 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 395 gagaggaggaggaggagcagcagc 372
>gb|AF198545.1|AF198545 Orconectes luteus strain KC25/6 internal transcribed spacer 1, partial sequence Length = 648 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 395 gagaggaggaggaggagcagcagc 372
>gb|AF198544.1|AF198544 Orconectes luteus strain KC25/5 internal transcribed spacer 1, partial sequence Length = 672 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 395 gagaggaggaggaggagcagcagc 372
>gb|AF198542.1|AF198542 Orconectes luteus strain KC25/3 internal transcribed spacer 1, partial sequence Length = 680 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 395 gagaggaggaggaggagcagcagc 372
>gb|AF198541.1|AF198541 Orconectes luteus strain KC25/2 internal transcribed spacer 1, partial sequence Length = 681 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 398 gagaggaggaggaggagcagcagc 375
>gb|AF198540.1|AF198540 Orconectes luteus strain KC25/1 internal transcribed spacer 1, partial sequence Length = 680 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 395 gagaggaggaggaggagcagcagc 372
>gb|AF198539.1|AF198539 Orconectes luteus strain KC24/5 internal transcribed spacer 1, partial sequence Length = 682 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 395 gagaggaggaggaggagcagcagc 372
>gb|AF198538.1|AF198538 Orconectes luteus strain KC24/4 internal transcribed spacer 1, partial sequence Length = 648 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 395 gagaggaggaggaggagcagcagc 372
>gb|AF198536.1|AF198536 Orconectes luteus strain KC24/2 internal transcribed spacer 1, partial sequence Length = 680 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 397 gagaggaggaggaggagcagcagc 374
>gb|AF198535.1|AF198535 Orconectes luteus strain KC24/1 internal transcribed spacer 1, partial sequence Length = 601 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 262 gagaggaggaggaggaacagcagc 285 |||||||||||||||| ||||||| Sbjct: 372 gagaggaggaggaggagcagcagc 349
>dbj|AK101848.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069K04, full insert sequence Length = 3514 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 250 gtgcagatccaggagaggaggaggagga 277 |||| |||| |||||||||||||||||| Sbjct: 64 gtgcggatcgaggagaggaggaggagga 37
>dbj|AK101451.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039N10, full insert sequence Length = 3421 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 250 gtgcagatccaggagaggaggaggagga 277 |||| |||| |||||||||||||||||| Sbjct: 81 gtgcggatcgaggagaggaggaggagga 54
>dbj|AK101402.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037F15, full insert sequence Length = 2902 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 250 gtgcagatccaggagaggaggaggagga 277 |||| |||| |||||||||||||||||| Sbjct: 77 gtgcggatcgaggagaggaggaggagga 50
>dbj|AK058776.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-002-B02, full insert sequence Length = 325 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 232 caggagaggaggaggaggaa 213
>gb|AE003750.2| Drosophila melanogaster chromosome 3R, section 88 of 118 of the complete sequence Length = 227219 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 33315 ccaggagaggaggaggagga 33334
>gb|AE003716.5| Drosophila melanogaster chromosome 3R, section 54 of 118 of the complete sequence Length = 220035 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 113224 gaggaggaggaggaacagca 113205
>emb|AL928885.9| Zebrafish DNA sequence from clone CH211-195G24 in linkage group 3, complete sequence Length = 196857 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 ggagaggaggaggaggaacagcag 284 ||||||||||| |||||||||||| Sbjct: 115287 ggagaggaggacgaggaacagcag 115264
>gb|AC004184.1|AC004184 Homo sapiens clone UWGC:R3A from 6p21, complete sequence Length = 44710 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 13870 ccaggagaggaggaggagga 13851
>gb|BT001478.1| Drosophila melanogaster LD21452 full insert cDNA Length = 1126 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gaggaggaggaggaacagca 283 |||||||||||||||||||| Sbjct: 880 gaggaggaggaggaacagca 899
>gb|U09782.1|AIU09782 Argopecten irradians myosin heavy chain mRNA, complete cds Length = 6595 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cctcaagagccttcttttcc 79 |||||||||||||||||||| Sbjct: 3127 cctcaagagccttcttttcc 3108
>emb|AL139159.10| Human DNA sequence from clone RP5-894H24 on chromosome 1 Contains the 5' end of the CACNA1S gene for calcium channel voltage-dependent L type alpha 1S subunit, the TMEM9 gene for transmembrane protein 9 and a CpG island, complete sequence Length = 132131 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 52802 caggagaggaggaggaggaa 52783
>gb|AC132567.3| Mus musculus BAC clone RP24-559G13 from 3, complete sequence Length = 154142 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 76574 caggagaggaggaggaggaa 76555
>gb|BC060641.1| Mus musculus zinc finger protein 710, mRNA (cDNA clone MGC:79151 IMAGE:6849964), complete cds Length = 4485 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 4020 caggagaggaggaggaggaa 4001
>gb|AC131681.4| Mus musculus BAC clone RP23-353O7 from 9, complete sequence Length = 209929 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 200382 ccaggagaggaggaggagga 200401
>ref|NM_175433.4| Mus musculus zinc finger protein 710 (Zfp710), mRNA Length = 4485 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 4020 caggagaggaggaggaggaa 4001
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 gcgccggcggcagaggccgaggtc 195 |||||||||||| ||||||||||| Sbjct: 2162773 gcgccggcggcaaaggccgaggtc 2162796
>gb|AC166328.4| Mus musculus BAC clone RP23-31H5 from chromosome 5, complete sequence Length = 215189 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cttcttttccagtccagcga 89 |||||||||||||||||||| Sbjct: 49709 cttcttttccagtccagcga 49690
>emb|AL807762.9| Mouse DNA sequence from clone RP23-48F4 on chromosome 4, complete sequence Length = 264321 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 caggagaggaggaggaggaa 278 |||||||||||||||||||| Sbjct: 90038 caggagaggaggaggaggaa 90019
>emb|X55714.1|AIMHCMR Scallop (A.irradians) mRNA for myosin heavy chain Length = 6751 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 cctcaagagccttcttttcc 79 |||||||||||||||||||| Sbjct: 3136 cctcaagagccttcttttcc 3117
>dbj|AB000882.1| Homo sapiens genomic DNA for centromeric end of MHC class I region on chromosome 6, complete sequence Length = 148960 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 85260 ccaggagaggaggaggagga 85241
>dbj|AB000878.1| Homo sapiens genomic DNA for centromeric end of MHC class I region on chromosome 6, cosmid clone: TY2A9, complete sequence Length = 33983 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 32684 ccaggagaggaggaggagga 32665
>dbj|AB031008.1| Homo sapiens DNA, MHC class I CL region, 18.2 ancestral haplotype Length = 13817 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 6513 ccaggagaggaggaggagga 6532
>dbj|AB031007.1| Homo sapiens DNA, MHC class I region, 7.1 ancestral haplotype Length = 17063 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 365 ccaggagaggaggaggagga 346
>dbj|AB031005.1| Homo sapiens DNA, MHC class I CL region, 57.1 ancestral haplotype Length = 14911 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ccaggagaggaggaggagga 277 |||||||||||||||||||| Sbjct: 13884 ccaggagaggaggaggagga 13865 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,707,159 Number of Sequences: 3902068 Number of extensions: 5707159 Number of successful extensions: 464023 Number of sequences better than 10.0: 185 Number of HSP's better than 10.0 without gapping: 190 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 459751 Number of HSP's gapped (non-prelim): 4271 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
