ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal41e15 |
|---|---|
| Clone Library Name | barley_pub |
>YDQ4_SCHPO (O14197) Hypothetical protein C5D6.04 in chromosome I| Length = 452 Score = 50.8 bits (120), Expect = 1e-06 Identities = 30/126 (23%), Positives = 61/126 (48%) Frame = +1 Query: 43 SVLSMLKYAVLPIAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLG 222 +V S+L+ + +V + G+++A K L + +K+++ L PCL+F ++G Sbjct: 11 NVWSLLRPIIESDLEVIVIALGGYVLAKK--GFLPRDAQKVISSLNVYFFTPCLVFEKVG 68 Query: 223 SAITLEKLVQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFTVXXXXXXXXXXXPL 402 + + L+ L+ +PV V+ + + LI F++A + R F PL Sbjct: 69 NGLNLKMLIDLSLLPVFYVIISAASILISFLLAKLFRLTPRQRNFATACITFQNSNSLPL 128 Query: 403 VLIAAL 420 L+++L Sbjct: 129 ALVSSL 134
>ECM3_YEAST (Q99252) Extracellular matrix protein 3| Length = 613 Score = 39.7 bits (91), Expect = 0.003 Identities = 24/91 (26%), Positives = 48/91 (52%) Frame = +1 Query: 67 AVLPIAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGSAITLEKL 246 +V PI K++ + +GF + +NIL + ++ +V ++LLPCL F+++ + I + Sbjct: 13 SVRPIIKIYLIIGVGFGLCK--MNILTVQATRSISDIVLTILLPCLSFNKIVANIEDNDI 70 Query: 247 VQWWYIPVNIVVGAVSGSLIGFVVASIIRPP 339 I + V+ +G F+V S++ P Sbjct: 71 KDVGIICLTSVILFATGLGFAFIVRSVLPVP 101
>YNJ5_YEAST (P53932) Hypothetical 71.2 kDa protein in RPS7B-YPT53 intergenic| region Length = 642 Score = 37.7 bits (86), Expect = 0.012 Identities = 24/95 (25%), Positives = 51/95 (53%) Frame = +1 Query: 67 AVLPIAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGSAITLEKL 246 +V PI K++ + +GFLMA + IL ++++ +V ++LLP L F+++ + I + + Sbjct: 13 SVKPIIKIYLIIGVGFLMAK--MGILTVEATRIISDIVLTVLLPSLSFNKIVANIEDKDI 70 Query: 247 VQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYF 351 I ++ ++ SG +VV + P ++ Sbjct: 71 KSVGIICLSALLIFGSGFFFAYVVRLFLPVPKQWY 105
>YL152_YEAST (P54072) Protein YLR152C| Length = 576 Score = 37.4 bits (85), Expect = 0.016 Identities = 18/56 (32%), Positives = 36/56 (64%) Frame = +1 Query: 67 AVLPIAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGSAIT 234 A+ PI K++T+ +G+L+A +I+ K ++ +V + +LPCL F+++ S I+ Sbjct: 12 ALKPIFKIYTIMLVGYLVAK--FDIVSMENAKGISNMVVNAILPCLTFNKIVSNIS 65
>YB8B_YEAST (P38355) Protein YBR287W| Length = 427 Score = 37.4 bits (85), Expect = 0.016 Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 1/129 (0%) Frame = +1 Query: 37 DTSVLSMLKYAVLP-IAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFS 213 +T + L Y V + +V + GF A+ +L +K+++ L L PCLIFS Sbjct: 3 ETFSFAHLAYLVFESVLQVVIIALAGFWSASS--GLLPKQSQKIISLLNVDLFTPCLIFS 60 Query: 214 QLGSAITLEKLVQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFTVXXXXXXXXXX 393 +L ++++ K+ + IP+ + + G +++ I+ F V Sbjct: 61 KLAKSLSMAKIFEIAIIPIFFGLTTGISFISGKIMSRILDLDKDETNFVVANSVFGNSNS 120 Query: 394 XPLVLIAAL 420 P+ L +L Sbjct: 121 LPVSLTLSL 129
>UDA1_RAT (P36510) UDP-glucuronosyltransferase 2A1 precursor (EC 2.4.1.17)| (UDPGT) (UGT-OLF) Length = 527 Score = 32.0 bits (71), Expect = 0.65 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Frame = -3 Query: 399 RYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHGTYNNIYWNIPPLHQLLES 232 RY +P + N++L WI ++D H K G +G Y IY IP + + + Sbjct: 336 RYKGKIPATLGSNTRLFDWIPQNDLLGHPKTRAFITHGGTNGIYEAIYHGIPMVGVPMFA 395 Query: 231 DRAAQLGKYKAR 196 D+ + KA+ Sbjct: 396 DQPDNIAHMKAK 407
>UDC1_RABIT (P36514) UDP-glucuronosyltransferase 2C1 (EC 2.4.1.17) (UDPGT)| (Fragment) Length = 502 Score = 31.6 bits (70), Expect = 0.85 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Frame = -3 Query: 399 RYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHGTYNNIYWNIPPLHQLLES 232 RY P + N++L WI ++D H K G +G Y IY +P + L Sbjct: 311 RYTGKKPATLGPNTRLFEWIPQNDLLGHPKTRAFITHGGTNGLYEAIYHGVPMVGIPLFG 370 Query: 231 DRAAQLGKYKAR 196 D+ + + KA+ Sbjct: 371 DQPDNIARVKAK 382
>UDB7_HUMAN (P16662) UDP-glucuronosyltransferase 2B7 precursor (EC 2.4.1.17)| (UDPGT) (3,4-catechol estrogen specific) (UDPGTh-2) Length = 529 Score = 31.2 bits (69), Expect = 1.1 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Frame = -3 Query: 399 RYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHGTYNNIYWNIPPLHQLLES 232 R+ N P + N++L WI ++D H K G +G Y IY IP + L + Sbjct: 338 RFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFA 397 Query: 231 DRAAQLGKYKAR 196 D+ + KAR Sbjct: 398 DQPDNIAHMKAR 409
>Y762_METJA (Q58172) Hypothetical protein MJ0762| Length = 342 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = +1 Query: 178 VFSLLLPCLIFSQLGSAITLEKLVQWWYIP-VNIVVGAVSGSLI 306 +FSL++P +F +I L+ + WYIP V ++V ++GSLI Sbjct: 119 LFSLIVPFYMFKS--ESIKLDHVNPGWYIPPVGLIVIPIAGSLI 160
>Y576_METJA (Q57996) Hypothetical protein MJ0576| Length = 347 Score = 30.4 bits (67), Expect = 1.9 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = +1 Query: 178 VFSLLLPCLIFSQLGSAITLEKLVQWWYIP-VNIVVGAVSGSLI 306 +FSL++P +F +I L+ + WYIP V ++V ++GSLI Sbjct: 126 LFSLIVPFYMFKS--ESIKLDHVNPGWYIPPVGLIVIPIAGSLI 167
>Y1031_METJA (Q58437) Hypothetical protein MJ1031| Length = 308 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/69 (20%), Positives = 36/69 (52%) Frame = +1 Query: 124 TKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGSAITLEKLVQWWYIPVNIVVGAVSGSL 303 +K IL+ K+LN +V + +P IF + ++ +++++ +PV I + + + Sbjct: 20 SKIFGILKEEHAKILNNIVIYIAMPSTIFLTISKNVSSSQILEFLKLPVVIFLCCLFVGI 79 Query: 304 IGFVVASII 330 + +++ I Sbjct: 80 LAYLLGKHI 88
>UDB4_HUMAN (P06133) UDP-glucuronosyltransferase 2B4 precursor (EC 2.4.1.17)| (UDPGT) (Hyodeoxycholic acid) (HLUG25) (UDPGTh-1) Length = 528 Score = 30.4 bits (67), Expect = 1.9 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Frame = -3 Query: 399 RYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHGTYNNIYWNIPPLHQLLES 232 R+ N P + N++L WI ++D H K G +G Y IY IP + L + Sbjct: 338 RFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGVPLFA 397 Query: 231 DRAAQLGKYKAR 196 D+ + KA+ Sbjct: 398 DQPDNIAHMKAK 409
>AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) Length = 764 Score = 29.6 bits (65), Expect = 3.2 Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 12/116 (10%) Frame = +1 Query: 4 ALVTAAQGGSTDTSVLSMLKYAVLPIAKVFTVCFMGFLMATKYVNI-----LQPNGRK-- 162 ALV A+ L+ + Y ++ + VC + L AT + I ++P +K Sbjct: 305 ALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQL 364 Query: 163 LLNGLVFSLLLPCLIFSQLGSAITL-----EKLVQWWYIPVNIVVGAVSGSLIGFV 315 +++ ++ ++ + + F L ++ T+ +K V+ W + + + VG +G +IGFV Sbjct: 365 VISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFV 420
>UDA1_HUMAN (Q9Y4X1) UDP-glucuronosyltransferase 2A1 precursor (EC 2.4.1.17)| Length = 527 Score = 29.6 bits (65), Expect = 3.2 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Frame = -3 Query: 399 RYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHGTYNNIYWNIPPLHQLLES 232 RY P + +N++L WI ++D H K G +G Y IY +P + + + Sbjct: 336 RYKGKKPATLGNNTQLFDWIPQNDLLGHPKTKAFITHGGTNGIYEAIYHGVPMVGVPMFA 395 Query: 231 DRAAQLGKYKAR 196 D+ + KA+ Sbjct: 396 DQPDNIAHMKAK 407
>UDB33_MACMU (Q9GLD9) UDP-glucuronosyltransferase 2B33 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 29.6 bits (65), Expect = 3.2 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Frame = -3 Query: 399 RYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHGTYNNIYWNIPPLHQLLES 232 R+ N P + N++L WI ++D H K G +G Y IY +P + L + Sbjct: 338 RFDGNKPDTLGVNTRLYKWIPQNDLLGHPKTKAFITHGGANGIYEAIYHGVPMVGIPLFA 397 Query: 231 DRAAQLGKYKAR 196 D+ + K R Sbjct: 398 DQPDNIAHMKTR 409
>UDB23_MACFA (Q9TSL6) UDP-glucuronosyltransferase 2B23 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 29.6 bits (65), Expect = 3.2 Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Frame = -3 Query: 399 RYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHGTYNNIYWNIPPLHQLLES 232 R+ N P + N++L WI ++D H K G +G Y IY +P + L + Sbjct: 338 RFDGNKPDTLGVNTRLYKWIPQNDLLGHPKTKAFITHGGANGIYEAIYHGVPMVGIPLFA 397 Query: 231 DRAAQLGKYKAR 196 D+ + K R Sbjct: 398 DQPDNIAHMKTR 409
>IPYR_PLAF7 (O77392) Probable inorganic pyrophosphatase (EC 3.6.1.1)| (Pyrophosphate phospho-hydrolase) (PPase) Length = 380 Score = 29.3 bits (64), Expect = 4.2 Identities = 19/73 (26%), Positives = 30/73 (41%) Frame = -3 Query: 411 NENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKANQGSRHGTYNNIYWNIPPLHQLLES 232 N++ Y V + + KLE+ +R + +G +N+IYWN L Q E Sbjct: 118 NDDGTYNMIVEITKYNYIKLEIQLREKFNVIKQDKKKGKLRYYHNSIYWNYGALPQTYEY 177 Query: 231 DRAAQLGKYKARK 193 + K K K Sbjct: 178 PKHIYQNKSKKNK 190
>VME1_IBVBC (P69602) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 225 Score = 29.3 bits (64), Expect = 4.2 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 9/75 (12%) Frame = +1 Query: 160 KLLNGLVFSLLLPCLIFSQLGSAI------TLEKLVQWWYIPVNIVVGAVSGSL---IGF 312 K N + + LL I Q G A TL+ +V W + P+NI VG +S + G Sbjct: 19 KEYNLFITAFLLFLTIILQYGYATRSKVIYTLKMIVLWCFWPLNIAVGVISCTYPPNTGG 78 Query: 313 VVASIIRPPYPYFKF 357 +VA+II + F Sbjct: 79 LVAAIILTVFACLSF 93
>VME1_IBVB (P69601) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 225 Score = 29.3 bits (64), Expect = 4.2 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 9/75 (12%) Frame = +1 Query: 160 KLLNGLVFSLLLPCLIFSQLGSAI------TLEKLVQWWYIPVNIVVGAVSGSL---IGF 312 K N + + LL I Q G A TL+ +V W + P+NI VG +S + G Sbjct: 19 KEYNLFITAFLLFLTIILQYGYATRSKVIYTLKMIVLWCFWPLNIAVGVISCTYPPNTGG 78 Query: 313 VVASIIRPPYPYFKF 357 +VA+II + F Sbjct: 79 LVAAIILTVFACLSF 93
>Y736_HAEIN (P44849) Hypothetical sodium-dependent transporter HI0736| Length = 508 Score = 28.9 bits (63), Expect = 5.5 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = +1 Query: 253 WWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFT 360 WW + VN+++G ++G+ + Y YF FT Sbjct: 95 WWQMMVNVIIGLYYAVVLGWAAS------YTYFSFT 124
>NIR_LEPMC (P43504) Nitrite reductase [NAD(P)H] (EC 1.7.1.4) (Fragment)| Length = 185 Score = 28.9 bits (63), Expect = 5.5 Identities = 21/64 (32%), Positives = 31/64 (48%) Frame = -3 Query: 321 RHHKANQGSRHGTYNNIYWNIPPLHQLLESDRAAQLGKYKARK*KREHKPVEKLAAVGLE 142 RH +A GS+ G +N WN P ++L E + A+L K + P ++ VGL Sbjct: 26 RHVQATWGSKDGNISNTEWNDPEANRLPE--KVAELEK---KGELNNSHPRRRVVVVGLG 80 Query: 141 DVDV 130 V V Sbjct: 81 MVGV 84
>UDB11_HUMAN (O75310) UDP-glucuronosyltransferase 2B11 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 28.9 bits (63), Expect = 5.5 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Frame = -3 Query: 399 RYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHGTYNNIYWNIPPLHQLLES 232 R+ N P + N++L WI ++D H K G +G Y IY IP + L Sbjct: 338 RFDGNKPDALGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFF 397 Query: 231 DRAAQLGKYKAR 196 D+ + KA+ Sbjct: 398 DQPDNIAHMKAK 409
>UDB10_HUMAN (P36537) UDP-glucuronosyltransferase 2B10 precursor (EC 2.4.1.17)| (UDPGT) Length = 528 Score = 28.9 bits (63), Expect = 5.5 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%) Frame = -3 Query: 399 RYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHGTYNNIYWNIPPLHQLLES 232 R+ N P + N++L WI ++D H K G +G Y IY IP + L Sbjct: 337 RFDGNKPDALGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFF 396 Query: 231 DRAAQLGKYKAR 196 D+ + KA+ Sbjct: 397 DQPDNIAHMKAK 408
>NYX_HUMAN (Q9GZU5) Nyctalopin precursor| Length = 481 Score = 28.5 bits (62), Expect = 7.2 Identities = 9/26 (34%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Frame = +3 Query: 243 VGAVVVYSSKYCCRCRV-WILDWLCG 317 +G + ++ + +CC CR+ W+ DW+ G Sbjct: 328 LGRLFLFRNPWCCDCRLEWLRDWMEG 353
>VME1_IBVB2 (P11222) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 225 Score = 28.5 bits (62), Expect = 7.2 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 13/69 (18%) Frame = +1 Query: 160 KLLNGLVFSLLLPCLIFSQLGSAI------TLEKLVQWWYIPVNIVVGAVS-------GS 300 K N + + LL I Q G A TL+ +V W + P+NI VG +S G Sbjct: 19 KEYNLFITAFLLFLTIILQYGYATRSKVIYTLKMIVLWCFWPLNIAVGVISCIYPPNTGG 78 Query: 301 LIGFVVASI 327 L+ ++ ++ Sbjct: 79 LVAAIILTV 87
>MSCL_ECOLI (P0A742) Large-conductance mechanosensitive channel| Length = 136 Score = 28.1 bits (61), Expect = 9.4 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +1 Query: 262 IPVNIVVGAVSGSLIGFVVASIIRPP 339 + V +++GA G ++ +VA II PP Sbjct: 19 LAVGVIIGAAFGKIVSSLVADIIMPP 44
>MSCL_ECO57 (P0A743) Large-conductance mechanosensitive channel| Length = 136 Score = 28.1 bits (61), Expect = 9.4 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +1 Query: 262 IPVNIVVGAVSGSLIGFVVASIIRPP 339 + V +++GA G ++ +VA II PP Sbjct: 19 LAVGVIIGAAFGKIVSSLVADIIMPP 44
>LEP4_LEGPN (O68433) Type 4 prepilin-like proteins leader peptide-processing| enzyme [Includes: Leader peptidase (EC 3.4.23.43) (Prepilin peptidase); N-methyltransferase (EC 2.1.1.-)] Length = 287 Score = 28.1 bits (61), Expect = 9.4 Identities = 7/25 (28%), Positives = 18/25 (72%) Frame = +1 Query: 253 WWYIPVNIVVGAVSGSLIGFVVASI 327 W Y+P+ +++ +++G++IG + I Sbjct: 225 WMYLPIILLISSITGAIIGLIYLKI 249
>UDB18_MACFA (O97951) UDP-glucuronosyltransferase 2B18 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 28.1 bits (61), Expect = 9.4 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Frame = -3 Query: 363 NSKLEVWIRRSDDRRHHKA----NQGSRHGTYNNIYWNIPPLHQLLESDRAAQLGKYKAR 196 N++L WI ++D H K G +G Y IY +P + L +D+ + KA+ Sbjct: 350 NTRLYKWIPQNDLLGHPKTRAFITHGGSNGIYEAIYHGVPMVGIPLFADQPDNIAHMKAK 409
>MSCL_SALTY (P0A1X8) Large-conductance mechanosensitive channel| Length = 137 Score = 28.1 bits (61), Expect = 9.4 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +1 Query: 262 IPVNIVVGAVSGSLIGFVVASIIRPP 339 + V +++GA G ++ +VA II PP Sbjct: 19 LAVGVIIGAAFGKIVSSLVADIIMPP 44
>MSCL_SALTI (P0A1X9) Large-conductance mechanosensitive channel| Length = 137 Score = 28.1 bits (61), Expect = 9.4 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +1 Query: 262 IPVNIVVGAVSGSLIGFVVASIIRPP 339 + V +++GA G ++ +VA II PP Sbjct: 19 LAVGVIIGAAFGKIVSSLVADIIMPP 44
>MSCL_ECOL6 (Q8FD11) Large-conductance mechanosensitive channel| Length = 137 Score = 28.1 bits (61), Expect = 9.4 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +1 Query: 262 IPVNIVVGAVSGSLIGFVVASIIRPP 339 + V +++GA G ++ +VA II PP Sbjct: 19 LAVGVIIGAAFGKIVSSLVADIIMPP 44
>VME1_IBVBU (Q91QS9) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 225 Score = 28.1 bits (61), Expect = 9.4 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 10/67 (14%) Frame = +1 Query: 160 KLLNGLVFSLLLPCLIFSQLGSAI------TLEKLVQWWYIPVNIVVGAVS----GSLIG 309 K N + + LL I Q G A TL+ +V W + P+NI VG +S + G Sbjct: 19 KEYNLFITAFLLFLTIILQYGYATRTKVIYTLKMIVLWCFWPLNIAVGVISCTYPPNTGG 78 Query: 310 FVVASII 330 VVA I+ Sbjct: 79 LVVAIIL 85
>VME1_IBV6 (P05136) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 225 Score = 28.1 bits (61), Expect = 9.4 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 13/69 (18%) Frame = +1 Query: 160 KLLNGLVFSLLLPCLIFSQLGSAIT------LEKLVQWWYIPVNIVVGAVS-------GS 300 K N V + LL I Q G A L+ +V W + P+NI VGA+S G Sbjct: 19 KEYNLFVTAFLLFLTILLQYGYATRNKVIYILKMIVLWCFWPLNIAVGAISCIYPPNTGG 78 Query: 301 LIGFVVASI 327 L+ ++ ++ Sbjct: 79 LVAAIILTV 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,745,873 Number of Sequences: 219361 Number of extensions: 1103153 Number of successful extensions: 3714 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3612 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3711 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
