>IM30_ORYSA (Q8S0J7) Probable membrane-associated 30 kDa protein, chloroplast|
           precursor
          Length = 317

 Score =  280 bits (715), Expect = 4e-75
 Identities = 147/180 (81%), Positives = 156/180 (86%)
 Frame = +3

Query: 153 RQPNVKRYKCNVIRSNLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQA 332
           RQ NV R+KCN IRSNL DR +RV +SYANAV+SSFEDPEKILDQAVLEMNDDL KMRQA
Sbjct: 44  RQSNVNRFKCNGIRSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQA 103

Query: 333 TAQVLASQKRLENKYKAAAQADADWYRRAQLALXKGDEELAREALKRRKSYADNAXXXXX 512
           TAQVLASQKRLENKYKAA QA  DWYRRAQLAL KGDE+LAREALKRRKSYADNA     
Sbjct: 104 TAQVLASQKRLENKYKAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKA 163

Query: 513 XXXXXXXVVENLVSNTKLLESKIAEARQKKDTLKARAQSAKTATKVSEMLGNVNTSSALS 692
                  VVENLVSNT++LESKIAEA+QKKDTLKARAQSAKT+TKVSEMLGNVNTS ALS
Sbjct: 164 QLDQQKGVVENLVSNTRVLESKIAEAKQKKDTLKARAQSAKTSTKVSEMLGNVNTSGALS 223

>IM30_PEA (Q03943) Membrane-associated 30 kDa protein, chloroplast precursor|
           (M30)
          Length = 323

 Score =  256 bits (653), Expect = 6e-68
 Identities = 138/188 (73%), Positives = 153/188 (81%), Gaps = 1/188 (0%)
 Frame = +3

Query: 132 TAKFRIRRQPNVKRYKCNV-IRSNLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMND 308
           T KFR+ R     R    + +R NLFDR  RV +SYANA++S+FEDPEKIL+QAVLEMND
Sbjct: 39  TLKFRVMRIAKPVRGGGAIGVRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMND 98

Query: 309 DLIKMRQATAQVLASQKRLENKYKAAAQADADWYRRAQLALXKGDEELAREALKRRKSYA 488
           DL KMRQATAQVLASQKRLENKYKAA QA  +WYR+AQLAL KG+E+LAREALKRRKS+A
Sbjct: 99  DLTKMRQATAQVLASQKRLENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFA 158

Query: 489 DNAXXXXXXXXXXXXVVENLVSNTKLLESKIAEARQKKDTLKARAQSAKTATKVSEMLGN 668
           DNA            VV+NLVSNT+LLESKI EAR KKDTLKARAQSAKTATKVSEMLGN
Sbjct: 159 DNASSLKAQLDQQKSVVDNLVSNTRLLESKIQEARSKKDTLKARAQSAKTATKVSEMLGN 218

Query: 669 VNTSSALS 692
           VNTSSALS
Sbjct: 219 VNTSSALS 226

>IM30_ARATH (O80796) Probable membrane-associated 30 kDa protein, chloroplast|
           precursor
          Length = 330

 Score =  233 bits (595), Expect = 3e-61
 Identities = 123/176 (69%), Positives = 142/176 (80%), Gaps = 2/176 (1%)
 Frame = +3

Query: 171 RYKCNV--IRSNLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQATAQV 344
           R +CN      NLF+R +RV +SYANA+ISSFEDPEKIL+Q V+EMN DL KMRQATAQV
Sbjct: 62  RLRCNGHGATMNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQATAQV 121

Query: 345 LASQKRLENKYKAAAQADADWYRRAQLALXKGDEELAREALKRRKSYADNAXXXXXXXXX 524
           LASQK+L+NKYKAA Q+  DWY+RAQLAL KGDE+LAREALKRRKS+ADNA         
Sbjct: 122 LASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALKTQLDQ 181

Query: 525 XXXVVENLVSNTKLLESKIAEARQKKDTLKARAQSAKTATKVSEMLGNVNTSSALS 692
              VV+NLVSNT+LLESKI EA+ KKDTL ARA++AKTATKV EM+G VNTS ALS
Sbjct: 182 QKGVVDNLVSNTRLLESKIQEAKAKKDTLLARARTAKTATKVQEMIGTVNTSGALS 237

>Y617_SYNY3 (Q55707) Hypothetical protein sll0617|
          Length = 267

 Score =  143 bits (360), Expect = 6e-34
 Identities = 75/164 (45%), Positives = 105/164 (64%)
 Frame = +3

Query: 201 LFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQATAQVLASQKRLENKYK 380
           LFDRL RV R+  N ++S  EDPEK+L+QAV++M +DL+++RQA A+ +A +KR E +  
Sbjct: 3   LFDRLGRVVRANLNDLVSKAEDPEKVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQRLN 62

Query: 381 AAAQADADWYRRAQLALXKGDEELAREALKRRKSYADNAXXXXXXXXXXXXVVENLVSNT 560
              Q    W  RA+LAL  G+E LAREAL R+KS  D A            + ENL  N 
Sbjct: 63  QDTQEAKKWEDRAKLALTNGEENLAREALARKKSLTDTAAAYQTQLAQQRTMSENLRRNL 122

Query: 561 KLLESKIAEARQKKDTLKARAQSAKTATKVSEMLGNVNTSSALS 692
             LE+KI+EA+ KK+ L+ARA++AK   ++ + LG + TSSA S
Sbjct: 123 AALEAKISEAKTKKNMLQARAKAAKANAELQQTLGGLGTSSATS 166

>PSPA_DEIRA (Q9RUB7) Phage shock protein A homolog|
          Length = 223

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 53/164 (32%), Positives = 87/164 (53%)
 Frame = +3

Query: 198 NLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQATAQVLASQKRLENKY 377
           ++FDRL+R+ R+  N +IS  EDP KI+DQA+ +M       R   A  +A   +LE + 
Sbjct: 2   SIFDRLSRLLRANVNDMISKAEDPAKIIDQALRDMRSAYADARNEVAGAMAQAAKLEREA 61

Query: 378 KAAAQADADWYRRAQLALXKGDEELAREALKRRKSYADNAXXXXXXXXXXXXVVENLVSN 557
              ++  A++ ++A+ AL  G E+LAREAL+R +++ D A             V+ L + 
Sbjct: 62  GTNSKLAAEYEKKAEEALRGGSEDLAREALRRAQNHKDLAKGFDEQRTVQQSTVDQLKTQ 121

Query: 558 TKLLESKIAEARQKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 689
            + LE+KI E   KK  L AR ++A+    +  + G      A+
Sbjct: 122 LRALEAKIDEMESKKTLLAARQKTAQAGETLDRVSGFSKAGGAM 165

>PSPA_SHIFL (P0AFM8) Phage shock protein A|
          Length = 221

 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 44/164 (26%), Positives = 83/164 (50%)
 Frame = +3

Query: 201 LFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQATAQVLASQKRLENKYK 380
           +F R   +  +  NA++   EDP+K++   + EM D L+++R  +A+ LA +K+L  + +
Sbjct: 2   IFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIE 61

Query: 381 AAAQADADWYRRAQLALXKGDEELAREALKRRKSYADNAXXXXXXXXXXXXVVENLVSNT 560
            A+  + +W  +A+LAL K  E+LAR AL  ++   D               +  +    
Sbjct: 62  QASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEI 121

Query: 561 KLLESKIAEARQKKDTLKARAQSAKTATKVSEMLGNVNTSSALS 692
             LE+K++E R ++  L  R Q+A ++  V   L +     A++
Sbjct: 122 GELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMA 165

>PSPA_ECOLI (P0AFM6) Phage shock protein A|
          Length = 221

 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 44/164 (26%), Positives = 83/164 (50%)
 Frame = +3

Query: 201 LFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQATAQVLASQKRLENKYK 380
           +F R   +  +  NA++   EDP+K++   + EM D L+++R  +A+ LA +K+L  + +
Sbjct: 2   IFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIE 61

Query: 381 AAAQADADWYRRAQLALXKGDEELAREALKRRKSYADNAXXXXXXXXXXXXVVENLVSNT 560
            A+  + +W  +A+LAL K  E+LAR AL  ++   D               +  +    
Sbjct: 62  QASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEI 121

Query: 561 KLLESKIAEARQKKDTLKARAQSAKTATKVSEMLGNVNTSSALS 692
             LE+K++E R ++  L  R Q+A ++  V   L +     A++
Sbjct: 122 GELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMA 165

>PSPA_ECO57 (P0AFM7) Phage shock protein A|
          Length = 221

 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 44/164 (26%), Positives = 83/164 (50%)
 Frame = +3

Query: 201 LFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQATAQVLASQKRLENKYK 380
           +F R   +  +  NA++   EDP+K++   + EM D L+++R  +A+ LA +K+L  + +
Sbjct: 2   IFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIE 61

Query: 381 AAAQADADWYRRAQLALXKGDEELAREALKRRKSYADNAXXXXXXXXXXXXVVENLVSNT 560
            A+  + +W  +A+LAL K  E+LAR AL  ++   D               +  +    
Sbjct: 62  QASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEI 121

Query: 561 KLLESKIAEARQKKDTLKARAQSAKTATKVSEMLGNVNTSSALS 692
             LE+K++E R ++  L  R Q+A ++  V   L +     A++
Sbjct: 122 GELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGKLDEAMA 165

>LIAH_BACSU (O32201) Protein liaH|
          Length = 225

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 40/146 (27%), Positives = 69/146 (47%)
 Frame = +3

Query: 249 ISSFEDPEKILDQAVLEMNDDLIKMRQATAQVLASQKRLENKYKAAAQADADWYRRAQLA 428
           +   E+P+ +L+Q V +M  D+ K +Q   +      + + KY+ AA+       +AQLA
Sbjct: 18  LDKMENPKVMLNQYVRDMESDIAKAKQTIVKQHTIAYQFKKKYEEAAEVAGKRKNQAQLA 77

Query: 429 LXKGDEELAREALKRRKSYADNAXXXXXXXXXXXXVVENLVSNTKLLESKIAEARQKKDT 608
              G+EELA++AL   K     A             + +L      LE+K+ + + KK  
Sbjct: 78  FDAGEEELAKKALTEMKYLEGKAAEHKASYEQANSQLADLKEQLAALETKLQDVKDKKQA 137

Query: 609 LKARAQSAKTATKVSEMLGNVNTSSA 686
           L ARA +AK    ++     +++ SA
Sbjct: 138 LIARANAAKAKEHMNTTFDKIDSESA 163

>PSPA_BACSU (P54617) Phage shock protein A homolog|
          Length = 226

 Score = 67.4 bits (163), Expect = 4e-11
 Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
 Frame = +3

Query: 198 NLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQATAQVLASQKRLENKY 377
           ++  R   +  +  NA++   E+PEK++DQ +  MN DL K++  TA V+A ++R + +Y
Sbjct: 1   SIIGRFKDIMSANINALLDKAENPEKMVDQYLRNMNSDLAKVKAETAAVMAEEQRAKREY 60

Query: 378 KAAAQADADWYRR-AQLALXKGDEELAREALKRRKSYADNAXXXXXXXXXXXXVVENLVS 554
               QAD +     A  AL  G+E  AR+ L+R+ S                     +  
Sbjct: 61  H-ECQADMEKMESYAMKALQAGNESDARKFLERKTSLESKLSELQAANQIAATNAAQMRK 119

Query: 555 NTKLLESKIAEARQKKDTLKARAQSAKTATKVSEMLGNVNTSS 683
               L S I E   +K+ +KA+   AKT  +++++  +V+++S
Sbjct: 120 MHDKLVSDIGELEARKNMIKAKWAVAKTQERMNKLGASVSSTS 162

>GOGA3_HUMAN (Q08378) Golgin subfamily A member 3 (Golgin-160) (Golgi|
            complex-associated protein of 170 kDa) (GCP170)
          Length = 1498

 Score = 33.9 bits (76), Expect = 0.48
 Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
 Frame = +3

Query: 189  IRSNLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQATAQVLASQKRLE 368
            ++S  FD+   VA + AN  +   +  E++  +A   + +   KMR+  + + ++QK ++
Sbjct: 936  LQSLQFDKEQMVAVTEANEALK--KQIEELQQEARKAITEQKQKMRRLGSDLTSAQKEMK 993

Query: 369  NKYKAAAQADADWYRRAQLALX---KGDEELAREALKRRKSYADNAXXXXXXXXXXXXVV 539
             K+KA   A     RR Q AL      D EL +  L+ +   +D++             +
Sbjct: 994  TKHKAYENAVGILSRRLQEALAAKEAADAELGQ--LRAQGGSSDSSLALHERIQALEAEL 1051

Query: 540  ENLVSNTKLLE-----------SKIAEARQKKDTLKARAQSAKTATKVSEMLGNVNTSSA 686
            + +  +  LLE            ++ E+R+K   L+   Q ++   K  + L   N   A
Sbjct: 1052 QAVSHSKTLLEKELQEVIALTSQELEESREKVLELEDELQESRGFRKKIKRLEESNKKLA 1111

Query: 687  L 689
            L
Sbjct: 1112 L 1112

>ATI1_VACCV (P24759) 94 kDa A-type inclusion protein (ATI)|
          Length = 724

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 33/174 (18%), Positives = 72/174 (41%), Gaps = 15/174 (8%)
 Frame = +3

Query: 183 NVIRSNLFDRLTRVARSYANAVISSFEDPEKILD---QAVLEMNDDLIKMRQATAQVLAS 353
           +V ++   DRLT+  + + + + +  +D   +L+   + + E+ + L + R+  +++   
Sbjct: 455 SVYKTERIDRLTKEIKEHRD-IQNGTDDGSDLLEIDKKTIRELRESLDREREMRSELEKE 513

Query: 354 QKRLENKYKAAAQADADWYRRAQLA---LXKGDEELAREALKRR---------KSYADNA 497
              + N      + D    R  +L+   L + D++L  E  KRR         +      
Sbjct: 514 LDTIRN-----GKVDGSCQRELELSRMWLKQRDDDLRAEIDKRRNVEWELSRLRRDIKEC 568

Query: 498 XXXXXXXXXXXXVVENLVSNTKLLESKIAEARQKKDTLKARAQSAKTATKVSEM 659
                        + N V     LES+IA+ +Q +DTL    +  +   +V ++
Sbjct: 569 DKYKEDLDKAKTTISNYVKQISTLESEIAKYQQDRDTLSVVRRELEEERRVRDL 622

>GOGA3_MOUSE (P55937) Golgin subfamily A member 3 (Golgin-160) (Male-enhanced|
            antigen 2) (MEA-2)
          Length = 1487

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 38/179 (21%), Positives = 74/179 (41%), Gaps = 12/179 (6%)
 Frame = +3

Query: 189  IRSNLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQATAQVLASQKRLE 368
            ++S  FD+   +A + AN  +   +  E++  +A   + +   KM++  + + ++QK ++
Sbjct: 932  LQSLKFDKEQMIALTEANETLK--KQIEELQQEAKKAITEQKQKMKRLGSDLTSAQKEMK 989

Query: 369  NKYKAAAQADADWYRRAQLALXKGDEELAREALKRRKSYADNAXXXXXXXXXXXXVVENL 548
             K+KA   A +   RR Q AL   +   A     R +S   ++            V    
Sbjct: 990  TKHKAYENAVSILSRRLQEALASKEATDAELNQLRAQSTGGSSDPVLHEKIRALEVELQN 1049

Query: 549  VSNTKLLESK------------IAEARQKKDTLKARAQSAKTATKVSEMLGNVNTSSAL 689
            V  +K+L  K            + E+R+K   L+   Q ++   +  + L   N   AL
Sbjct: 1050 VGQSKILLEKELQEVITMTSQELEESREKVLELEDELQESRGFRRKIKRLEESNKKLAL 1108

>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H|
            antigen)
          Length = 2115

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 44/182 (24%), Positives = 72/182 (39%), Gaps = 6/182 (3%)
 Frame = +3

Query: 135  AKFRIRRQPNVK---RYKCNVIRSNLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMN 305
            A FR + Q + K    +K  V R        R      N++ISS E+   IL++ VLE  
Sbjct: 1193 AAFRTKVQDHSKAEDEWKAQVARG-------RQEAERKNSLISSLEEEVSILNRQVLEKE 1245

Query: 306  DDLIKMRQATAQVLASQKRLENKYKAAAQADADWYRRA---QLALXKGDEELAREALKRR 476
             +  ++++         ++LE + +      A    RA     AL +  + L  EA K+R
Sbjct: 1246 GESKELKRLVMAESEKSQKLEERLRLLQAETASNSARAAERSSALREEVQSLREEAEKQR 1305

Query: 477  KSYADNAXXXXXXXXXXXXVVENLVSNTKLLESKIAEARQKKDTLKARAQSAKTATKVSE 656
             + ++N               E L    K  + K  +  Q   TL  + +   T   VSE
Sbjct: 1306 VA-SENLRQELTSQAER---AEELGQELKAWQEKFFQKEQALSTL--QLEHTSTQALVSE 1359

Query: 657  ML 662
            +L
Sbjct: 1360 LL 1361

>DDX27_MOUSE (Q921N6) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)|
           (DEAD box protein 27)
          Length = 760

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
 Frame = +3

Query: 225 ARSYANAVISSFEDPEKILDQ---AVLEMNDDLIKMRQATAQVLASQKRL-ENKYKAAAQ 392
           AR     VI  F D  + L++   AVL++  +  +M+Q+ AQ+  +Q+ L + K  A  +
Sbjct: 554 ARILPQDVILKFRDKIEKLEKDVYAVLQLEAEEKEMQQSEAQIDTAQRLLAKGKETADQE 613

Query: 393 ADADWY------RRAQLALXKGDEELAREALKRRKSYADNA 497
            +  W+      ++ ++A    + +LA    K+RK +  +A
Sbjct: 614 PERSWFQTKEERKKEKIAKALQEFDLALRGKKKRKKFMKDA 654

>DDX27_HUMAN (Q96GQ7) Probable ATP-dependent RNA helicase DDX27 (EC 3.6.1.-)|
           (DEAD box protein 27)
          Length = 796

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 25/101 (24%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
 Frame = +3

Query: 225 ARSYANAVISSFEDPEKILDQ---AVLEMNDDLIKMRQATAQVLASQKRLENKYKAAAQ- 392
           AR     VI  F D  + +++   AVL++  +  +M+Q+ AQ+  +++ LE   +A  Q 
Sbjct: 588 ARILPQDVILKFRDKIEKMEKDVYAVLQLEAEEKEMQQSEAQINTAKRLLEKGKEAVVQE 647

Query: 393 ADADWY------RRAQLALXKGDEELAREALKRRKSYADNA 497
            +  W+      ++ ++A    + +LA    K+RK +  +A
Sbjct: 648 PERSWFQTKEERKKEKIAKALQEFDLALRGKKKRKKFMKDA 688

>GCH1_CORGL (Q8NM84) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)|
          Length = 196

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 192 RSNLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQ 329
           R  L +   RVAR+Y        EDP  +L++   E +++L+ +R+
Sbjct: 32  REGLLETPARVARAYKETFAGLHEDPTTVLEKTFSEGHEELVLVRE 77

>35KD_MYCTU (P31511) 35 kDa protein|
          Length = 270

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 21/184 (11%)
 Frame = +3

Query: 195 SNLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQATAQVLASQKRLENK 374
           +N F +  +   +  ++ I    DP+  + QA+ E       + Q  AQV+ +Q++LE +
Sbjct: 2   ANPFVKAWKYLMALFSSKIDEHADPKVQIQQAIEEAQRTHQALTQQAAQVIGNQRQLEMR 61

Query: 375 YKAAAQADADWYRRAQLALXKGDEELAREALKRRKSYADNAXXXXXXXXXXXXVVENLVS 554
                          + AL   D+  A     +   Y + A             VE+L +
Sbjct: 62  LNRQLADIEKLQVNVRQALTLADQATAAGDAAKATEYNNAAEAFAAQLVTAEQSVEDLKT 121

Query: 555 ------------------NTKLLESKIAEARQ---KKDTLKARAQSAKTATKVSEMLGNV 671
                             N  +L+ KIAE  +   + +  K + Q + +   +SE+    
Sbjct: 122 LHDQALSAAAQAKKAVERNAMVLQQKIAERTKLLSQLEQAKMQEQVSASLRSMSELAAPG 181

Query: 672 NTSS 683
           NT S
Sbjct: 182 NTPS 185

>SYCP1_MESAU (Q60563) Synaptonemal complex protein 1 (SCP-1) (Meiotic chromosome|
           synaptic protein) (Fragment)
          Length = 845

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 3/182 (1%)
 Frame = +3

Query: 153 RQPNVKRYKCNVIRSNLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQA 332
           ++ N  R+ CN+++          ARS      + +E   +   Q  +++N+++ KM  A
Sbjct: 27  KENNATRHLCNLLKETS-------ARSAEKT--NKYEYEREETRQVYVDLNNNIEKMILA 77

Query: 333 TAQ--VLASQKRLENKYKAAAQADADWYRRAQLALXKGDEELAREALKRRKSYADNAXXX 506
             +  V A   RL+  +K     +   + + +      D+E     L  +++  +N    
Sbjct: 78  FEELRVQAENARLDMHFKLKEDHEKIQHLQEEYKKEVNDKENQVSLLLIQRTEKENKMKD 137

Query: 507 XXXXXXXXX-VVENLVSNTKLLESKIAEARQKKDTLKARAQSAKTATKVSEMLGNVNTSS 683
                      V  L   TKL +  + E  +KKD L +  +  K + + S     +NT  
Sbjct: 138 LTFLLEESRDKVNQLEDKTKLQDENVKELNKKKDHLTSELEDTKMSLQRS-----MNTQK 192

Query: 684 AL 689
           AL
Sbjct: 193 AL 194

>GATB_FUSNN (Q8R680) Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B|
           (EC 6.3.5.-) (Asp/Glu-ADT subunit B)
          Length = 481

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 23/95 (24%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
 Frame = +3

Query: 129 LTAKFRIRRQPNVKRYKCNVIRSNL------FDRLT---RVARSYANAVISSFEDPEKIL 281
           LT   RI +  N+   K  +   NL       D+ T   ++A+      +    DPE I+
Sbjct: 349 LTEVLRILKHKNIDIEKFTISSENLAKIIKLIDKNTISSKIAKEVFEIALDDSRDPEIIV 408

Query: 282 DQAVLEMNDDLIKMRQATAQVLASQKRLENKYKAA 386
            +  L    D  ++ +   +VLA+ +++ + YK+A
Sbjct: 409 KEKGLVQLSDTSEIEKMVDEVLANNQKMVDDYKSA 443

>BRE1_CRYNE (Q5KBI0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 820

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 3/159 (1%)
 Frame = +3

Query: 225  ARSYANAVISSFEDPEKI---LDQAVLEMNDDLIKMRQATAQVLASQKRLENKYKAAAQA 395
            A +  NA+ S  E   K+   LDQ V     +L    Q   ++   + + +NKY AA +A
Sbjct: 557  AEAATNALYSEVEGLSKLWEALDQTVKSKVLELRDGEQKITRLATEKAKADNKYFAAMRA 616

Query: 396  DADWYRRAQLALXKGDEELAREALKRRKSYADNAXXXXXXXXXXXXVVENLVSNTKLLES 575
                   A+ A    +++L    L+R +    +              ++N   N   L++
Sbjct: 617  KEAVDMEAKAAQRSVEKQL--RLLERAQEVETSLRSQITANEKGLTALKN---NALDLQN 671

Query: 576  KIAEARQKKDTLKARAQSAKTATKVSEMLGNVNTSSALS 692
            ++A    +K  L+ R Q ++ A   ++ + +   + A++
Sbjct: 672  QLATVVAEKTQLELRLQQSQNALVEAQQIMHQRVAEAIA 710

>SNF7_CANAL (Q5ABD0) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 226

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 3/125 (2%)
 Frame = +3

Query: 285 QAVLEMNDD---LIKMRQATAQVLASQKRLENKYKAAAQADADWYRRAQLALXKGDEELA 455
           +A++E+ +    L K +    Q +  Q +L  KY ++ Q                   LA
Sbjct: 19  KAIVELREHIQTLNKKKNHLQQQMDDQDQLARKYVSSKQTT-----------------LA 61

Query: 456 REALKRRKSYADNAXXXXXXXXXXXXVVENLVSNTKLLESKIAEARQKKDTLKARAQSAK 635
           + ALKR+K Y  N              VEN +   +     I  A    +T+KA  Q AK
Sbjct: 62  KSALKRKKGYESNLLK-----------VENQIETLETQLISIEGANLNLETMKAMKQGAK 110

Query: 636 TATKV 650
              ++
Sbjct: 111 AMKQI 115

>ATI1_VARV (P34011) 81 kDa A-type inclusion protein (ATI)|
          Length = 702

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 14/159 (8%)
 Frame = +3

Query: 183 NVIRSNLFDRLTRVARSYANAVISSFE--DPEKILDQAVLEMNDDLIKMRQATAQVLASQ 356
           +V ++   DRLT+  +   +    + +  D  +I  + + E+ + L + R+  +++   +
Sbjct: 456 SVYKTERIDRLTKEIKELRDIQNGTDDGSDSSEIDKKTIRELKESLDREREMRSEL---E 512

Query: 357 KRLENKYKAAAQADADWYRRAQLA---LXKGDEELAREALKRR---------KSYADNAX 500
           K L+       + D     R +L+   L + D++L  E  KRR         +       
Sbjct: 513 KELDTIRDG--KVDGSCQGRLELSRMWLKQRDDDLRAEIDKRRNVEWELSKLRRDIKECD 570

Query: 501 XXXXXXXXXXXVVENLVSNTKLLESKIAEARQKKDTLKA 617
                       + N VS    LES+IA+ +Q +DTL A
Sbjct: 571 KYKEELDKAKTTISNYVSRISTLESEIAKYQQDRDTLSA 609

>GCH1_COREF (Q8FMG3) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)|
          Length = 197

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 15/49 (30%), Positives = 25/49 (51%)
 Frame = +3

Query: 183 NVIRSNLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQ 329
           N  R  L +   RVAR+Y        EDP  +L++   E + +L+ +R+
Sbjct: 30  NPEREGLLETPARVARAYREIFAGLHEDPTAVLNKTFSEDHQELVLVRE 78

>ATI_COWPX (P16602) A-type inclusion protein (ATI)|
          Length = 1284

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 12/155 (7%)
 Frame = +3

Query: 183 NVIRSNLFDRLTRVARSYANAVISSFE--DPEKILDQAVLEMNDDLIKMRQATAQVLASQ 356
           +V ++   DRLT+  +   +    + +  D  +I  + + E+ + L + R+   ++    
Sbjct: 457 SVYKTERIDRLTKEIKELRDIQNGTDDGSDSSEIDKKTIRELRESLDREREMRTELEREL 516

Query: 357 KRL-ENKYKAAAQADADWYRRAQLALXKGDEELAREALKRR---------KSYADNAXXX 506
             + + K + + Q + +  R   + L + D++L  E  KRR         +         
Sbjct: 517 DTIRDGKVEGSCQRELELSR---MWLKQRDDDLRAEIDKRRNVEWELSRLRRDIKECDKY 573

Query: 507 XXXXXXXXXVVENLVSNTKLLESKIAEARQKKDTL 611
                     + N VS    LES+IA+ +Q +DTL
Sbjct: 574 KEDLDKAKTTISNYVSRISTLESEIAKYQQDRDTL 608

>MUTS2_BACHD (Q9K8A0) MutS2 protein|
          Length = 785

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 22/78 (28%), Positives = 41/78 (52%)
 Frame = +3

Query: 228 RSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQATAQVLASQKRLENKYKAAAQADADW 407
           RS A A+       EKI++QA   +++D  ++    A +  SQK  E+ ++ A +A  + 
Sbjct: 488 RSNAFAISKRLGLEEKIIEQAKAHIDEDASQVESMIASLEQSQKSAESDWEEAEKALQE- 546

Query: 408 YRRAQLALXKGDEELARE 461
             + +L L K  ++L +E
Sbjct: 547 AEQLRLDLQKKLDDLEKE 564

>MLP1_YEAST (Q02455) Protein MLP1 (Myosin-like protein 1)|
          Length = 1875

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
 Frame = +3

Query: 297  EMNDDLIKMRQATAQVLA-------SQKRLENKYKAAAQADADWYRRAQLALXKGDEELA 455
            E+  +L K++Q  A + +       S +  E + K A +    W +R+Q  L K  E+L+
Sbjct: 1239 ELQSELDKLKQNVAPIESELTALKYSMQEKEQELKLAKEEVHRWKKRSQDILEK-HEQLS 1297

Query: 456  REALKRRKSYADNAXXXXXXXXXXXXVVENLVSNTKLLESKIAEARQKKDTLKARAQSAK 635
                ++ +S                  +ENL    +  E + AEA +K + L+ +AQ   
Sbjct: 1298 SSDYEKLESE-----------------IENLKEELENKERQGAEAEEKFNRLRRQAQERL 1340

Query: 636  TATKVSE 656
              +K+S+
Sbjct: 1341 KTSKLSQ 1347

>SNF7_DEBHA (Q6BSH2) Vacuolar sorting protein SNF7 (Vacuolar protein|
           sorting-associated protein VPS32)
          Length = 226

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +3

Query: 411 RRAQLALXKGDEE-LAREALKRRKSYADNAXXXXXXXXXXXXVVENLVSNTKLLESKIAE 587
           +R+ L L   D++ LAR+ +   K+ A NA             +EN + + +   + I  
Sbjct: 34  KRSHLELQIADQDALARKYITTNKALAKNALKRKKGYEANLMKIENQIDSLETQLTSIEG 93

Query: 588 ARQKKDTLKARAQSAKTATKV 650
           A    +T+KA  Q A+   ++
Sbjct: 94  ANLNLETMKAMKQGAQAMKQI 114

>MERL_PAPAN (P59750) Merlin (Moesin-ezrin-radixin-like protein)|
           (Neurofibromin-2) (Schwannomin)
          Length = 595

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
 Frame = +3

Query: 294 LEMNDDLIKMRQATAQVLASQKRL--ENKYKAAAQADADWYRRAQLALXKGDEELAREAL 467
           LE+     + R+  A+    ++RL  E + +  A+   D   R  L + K +  +A EAL
Sbjct: 316 LEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERRLLQM-KEEATMANEAL 374

Query: 468 KRRKSYADNAXXXXXXXXXXXXVVENLVSNTKLLESKIAEARQKKDTLKARAQSAKTATK 647
            R +  AD              + E      KLL  K AEA Q+   +KA A   +   +
Sbjct: 375 MRSEETAD-------LLAEKAQITEE---EAKLLAQKAAEAEQEMQRIKATAIRTEEEKR 424

Query: 648 VSE 656
           + E
Sbjct: 425 LME 427

>MERL_HUMAN (P35240) Merlin (Moesin-ezrin-radixin-like protein)|
           (Neurofibromin-2) (Schwannomin) (Schwannomerlin)
          Length = 595

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
 Frame = +3

Query: 294 LEMNDDLIKMRQATAQVLASQKRL--ENKYKAAAQADADWYRRAQLALXKGDEELAREAL 467
           LE+     + R+  A+    ++RL  E + +  A+   D   R  L + K +  +A EAL
Sbjct: 316 LEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERRLLQM-KEEATMANEAL 374

Query: 468 KRRKSYADNAXXXXXXXXXXXXVVENLVSNTKLLESKIAEARQKKDTLKARAQSAKTATK 647
            R +  AD              + E      KLL  K AEA Q+   +KA A   +   +
Sbjct: 375 MRSEETAD-------LLAEKAQITEE---EAKLLAQKAAEAEQEMQRIKATAIRTEEEKR 424

Query: 648 VSE 656
           + E
Sbjct: 425 LME 427

>IGA1_STRSA (Q59986) Immunoglobulin A1 protease precursor (EC 3.4.24.13) (IgA1|
            protease) (IgA-specific zinc metalloproteinase)
          Length = 1854

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 8/48 (16%)
 Frame = +3

Query: 192  RSNLFDRLTRVA--------RSYANAVISSFEDPEKILDQAVLEMNDD 311
            R N FD L +V          SYA   IS+ E+ + ++D+AVL+  +D
Sbjct: 1764 RKNKFDSLNKVTFDDTRQPWTSYATKTISTVEELQTLMDEAVLQDAND 1811

>PARC_SALTY (P26973) DNA topoisomerase 4 subunit A (EC 5.99.1.-) (Topoisomerase|
           IV subunit A)
          Length = 752

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +3

Query: 273 KILDQAVLEMNDDLIKMRQATAQVLASQKRLENKYKAAAQADADWY 410
           K+ +  +    D+L K R     +LAS++++    K   QADAD Y
Sbjct: 427 KLEEMKIRGEQDELEKERDQLQGILASERKMNTLLKKELQADADAY 472

>MERL_MOUSE (P46662) Merlin (Moesin-ezrin-radixin-like protein)|
           (Neurofibromin-2) (Schwannomin)
          Length = 596

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
 Frame = +3

Query: 294 LEMNDDLIKMRQATAQVLASQKRL--ENKYKAAAQADADWYRRAQLALXKGDEELAREAL 467
           LE+     + R+  A+    ++RL  E + +  A+   D   R  L + K +  +A EAL
Sbjct: 316 LEVQQMKAQAREEKARKQMERQRLAREKQMREEAERTRDELERRLLQM-KEEATMANEAL 374

Query: 468 KRRKSYADNAXXXXXXXXXXXXVVENLVSNTKLLESKIAEARQKKDTLKARAQSAKTATK 647
            R +  AD              + E      KLL  K AEA Q+   +KA A   +   +
Sbjct: 375 MRSEETAD-------LLAEKAQITEE---EAKLLAQKAAEAEQEMQRIKATAIRTEEEKR 424

Query: 648 VSE 656
           + E
Sbjct: 425 LME 427

>GCH1_MYCTU (P64207) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)|
          Length = 202

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 192 RSNLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQ 329
           R  L    +RVARSY       + DP+ +L+    E +D+L+ +++
Sbjct: 38  RDGLVATPSRVARSYREMFAGLYTDPDSVLNTMFDEDHDELVLVKE 83

>GCH1_MYCBO (P64208) GTP cyclohydrolase I (EC 3.5.4.16) (GTP-CH-I)|
          Length = 202

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +3

Query: 192 RSNLFDRLTRVARSYANAVISSFEDPEKILDQAVLEMNDDLIKMRQ 329
           R  L    +RVARSY       + DP+ +L+    E +D+L+ +++
Sbjct: 38  RDGLVATPSRVARSYREMFAGLYTDPDSVLNTMFDEDHDELVLVKE 83


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,172,762
Number of Sequences: 219361
Number of extensions: 1695767
Number of successful extensions: 4218
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 4058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4216
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 6856295237
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)