| Clone Name | baal41e04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 133 bits (67), Expect = 3e-28 Identities = 79/83 (95%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 785 agaacctcgccgaccacctctccgaccccgtcaacaacaacgcctgggccttcgccacca 844 Query: 86 actttgtgcccggcaagtaagct 108 |||| |||||||||||||||||| Sbjct: 845 acttcgtgcccggcaagtaagct 867 Score = 77.8 bits (39), Expect = 2e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 194 catgatgtaaagtacgagggttgaatgcaaaagactattgttagact 240 ||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 970 catgatgtaaagtacgaaggttgaatgcaaaagactgttgttagact 1016 Score = 40.1 bits (20), Expect = 3.4 Identities = 42/49 (85%), Gaps = 4/49 (8%) Strand = Plus / Plus Query: 128 gtgtctagaaaccgacagtgcacgt----acgtacgcgatgaagtgtgc 172 |||||| ||||||||| |||||||| ||||||||||| |||||||| Sbjct: 878 gtgtctggaaaccgaccgtgcacgtgcgtacgtacgcgatcaagtgtgc 926
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 123 bits (62), Expect = 3e-25 Identities = 74/78 (94%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||| Sbjct: 731 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcatgggcctatgccacca 790 Query: 86 actttgtgcccggcaagt 103 |||||||||||||||||| Sbjct: 791 actttgtgcccggcaagt 808
>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding protein mRNA, complete cds Length = 997 Score = 119 bits (60), Expect = 5e-24 Identities = 72/76 (94%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 792 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggccttcgccacca 851 Query: 86 actttgtgcccggcaa 101 |||| || |||||||| Sbjct: 852 acttcgtccccggcaa 867
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 115 bits (58), Expect = 7e-23 Identities = 73/78 (93%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| Sbjct: 707 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcctacgccacca 766 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 767 acttcgtccccggcaagt 784
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 115 bits (58), Expect = 7e-23 Identities = 73/78 (93%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| Sbjct: 1168 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcctacgccacca 1227 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 1228 acttcgtccccggcaagt 1245
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 115 bits (58), Expect = 7e-23 Identities = 73/78 (93%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| Sbjct: 23604250 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcctacgccacca 23604309 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 23604310 acttcgtccccggcaagt 23604327 Score = 109 bits (55), Expect = 4e-21 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 |||||||| ||| ||| ||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 30025040 ggcaaggggccactgg-agaacctggccgaccacctcgccgaccccgtcaacaacaacgc 30025098 Query: 69 gtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||| |||||||||||| || |||||||||| Sbjct: 30025099 atgggcctacgccaccaacttcgtccccggcaagt 30025133
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 115 bits (58), Expect = 7e-23 Identities = 73/78 (93%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| Sbjct: 66949 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcctacgccacca 67008 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 67009 acttcgtccccggcaagt 67026
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 115 bits (58), Expect = 7e-23 Identities = 73/78 (93%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| Sbjct: 778 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcctacgccacca 837 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 838 acttcgtccccggcaagt 855
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 115 bits (58), Expect = 7e-23 Identities = 73/78 (93%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| Sbjct: 777 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcctacgccacca 836 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 837 acttcgtccccggcaagt 854
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 115 bits (58), Expect = 7e-23 Identities = 73/78 (93%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| Sbjct: 1207 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcctacgccacca 1266 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 1267 acttcgtccccggcaagt 1284
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 115 bits (58), Expect = 7e-23 Identities = 73/78 (93%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||| Sbjct: 307 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcctacgccacca 366 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 367 acttcgtccccggcaagt 384
>gb|AF003127.1|AF003127 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1042 Score = 115 bits (58), Expect = 7e-23 Identities = 89/98 (90%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 6 actggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaa 65 ||||| ||||||||||||| |||||||||| ||||||||||| ||||| ||||||||||| Sbjct: 730 actggaaagggcccattgg-agaacctcgcagaccaccttgctgacccagtcaacaacaa 788 Query: 66 cgcgtgggccttcgccaccaactttgtgcccggcaagt 103 || |||||||||||||||||||| || |||||||||| Sbjct: 789 tgcttgggccttcgccaccaacttcgttcccggcaagt 826
>gb|AF279249.1|AF279249 Vigna radiata LHCII type I chlorophyll a/b-binding protein (CipLhcb1*2) mRNA, complete cds; nuclear gene for chloroplast product Length = 932 Score = 113 bits (57), Expect = 3e-22 Identities = 91/101 (90%), Gaps = 1/101 (0%) Strand = Plus / Plus Query: 5 cactggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaaca 64 |||||||||||| || |||| ||||||||||||| |||||||||||||| |||||||||| Sbjct: 752 cactggcaagggacctttgg-agaacctcgccgatcaccttgccgaccctgtcaacaaca 810 Query: 65 acgcgtgggccttcgccaccaactttgtgcccggcaagtaa 105 |||| ||||||| ||||||||||||||| || || |||||| Sbjct: 811 acgcctgggcctacgccaccaactttgtccctggaaagtaa 851
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 109 bits (55), Expect = 4e-21 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 |||||||| ||| ||| ||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 703 ggcaaggggccactgg-agaacctggccgaccacctcgccgaccccgtcaacaacaacgc 761 Query: 69 gtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||| |||||||||||| || |||||||||| Sbjct: 762 atgggcctacgccaccaacttcgtccccggcaagt 796
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 109 bits (55), Expect = 4e-21 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 |||||||| ||| ||| ||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 13971 ggcaaggggccactgg-agaacctggccgaccacctcgccgaccccgtcaacaacaacgc 13913 Query: 69 gtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||| |||||||||||| || |||||||||| Sbjct: 13912 atgggcctacgccaccaacttcgtccccggcaagt 13878
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 109 bits (55), Expect = 4e-21 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 |||||||| ||| ||| ||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 21030 ggcaaggggccactgg-agaacctggccgaccacctcgccgaccccgtcaacaacaacgc 21088 Query: 69 gtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||| |||||||||||| || |||||||||| Sbjct: 21089 atgggcctacgccaccaacttcgtccccggcaagt 21123
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 109 bits (55), Expect = 4e-21 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 |||||||| ||| ||| ||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 784 ggcaaggggccactgg-agaacctggccgaccacctcgccgaccccgtcaacaacaacgc 842 Query: 69 gtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||| |||||||||||| || |||||||||| Sbjct: 843 atgggcctacgccaccaacttcgtccccggcaagt 877
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 109 bits (55), Expect = 4e-21 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 |||||||| ||| ||| ||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 784 ggcaaggggccactgg-agaacctggccgaccacctcgccgaccccgtcaacaacaacgc 842 Query: 69 gtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||| |||||||||||| || |||||||||| Sbjct: 843 atgggcctacgccaccaacttcgtccccggcaagt 877
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 109 bits (55), Expect = 4e-21 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 |||||||| ||| ||| ||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 786 ggcaaggggccactgg-agaacctggccgaccacctcgccgaccccgtcaacaacaacgc 844 Query: 69 gtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||| |||||||||||| || |||||||||| Sbjct: 845 atgggcctacgccaccaacttcgtccccggcaagt 879
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 109 bits (55), Expect = 4e-21 Identities = 86/95 (90%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 |||||||| ||| ||| ||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 786 ggcaaggggccactgg-agaacctggccgaccacctcgccgaccccgtcaacaacaacgc 844 Query: 69 gtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||| |||||||||||| || |||||||||| Sbjct: 845 atgggcctacgccaccaacttcgtccccggcaagt 879
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 1731 agaacctcgctgaccacattgccgaccccgtcaacaacaacgcttgggcctacgccacca 1790 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 1791 acttcgtccccggcaagt 1808
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| Sbjct: 10793703 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcgtacgccacca 10793762 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 10793763 acttcgtccccggcaagt 10793780
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| Sbjct: 17426 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcgtacgccacca 17485 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 17486 acttcgtccccggcaagt 17503
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| Sbjct: 130321 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcgtacgccacca 130380 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 130381 acttcgtccccggcaagt 130398
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein LHCP Length = 967 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 783 agaacctcgctgaccacattgccgaccccgtcaacaacaacgcttgggcctacgccacca 842 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 843 acttcgtccccggcaagt 860
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| Sbjct: 771 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcgtacgccacca 830 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 831 acttcgtccccggcaagt 848
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| Sbjct: 776 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcgtacgccacca 835 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 836 acttcgtccccggcaagt 853
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| Sbjct: 778 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcgtacgccacca 837 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 838 acttcgtccccggcaagt 855
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| Sbjct: 776 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcgtacgccacca 835 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 836 acttcgtccccggcaagt 853
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| Sbjct: 776 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcgtacgccacca 835 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 836 acttcgtccccggcaagt 853
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| ||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 1731 agaacctcgctgaccacattgccgaccccgtcaacaacaacgcttgggcctacgccacca 1790 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 1791 acttcgtccccggcaagt 1808
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 107 bits (54), Expect = 2e-20 Identities = 88/98 (89%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 |||||||||||| | | |||||||||| |||||| | |||||||||||||||||||| || Sbjct: 715 ggcaagggcccacttg-agaacctcgctgaccacatcgccgaccccgtcaacaacaatgc 773 Query: 69 gtgggccttcgccaccaactttgtgcccggcaagtaag 106 ||||| ||||||||||||||||| ||||||||||||| Sbjct: 774 atgggcattcgccaccaactttgtccccggcaagtaag 811
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 107 bits (54), Expect = 2e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| ||||||||||||||||||||||| ||||| | |||||||| Sbjct: 757 agaacctcgccgaccacctcgccgaccccgtcaacaacaacgcctgggcgtacgccacca 816 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 817 acttcgtccccggcaagt 834
>gb|AF139467.2|AF139467 Vigna radiata LHCII type I chlorophyll a/b binding protein (CipLhcb1) mRNA, complete cds; nuclear gene for chloroplast product Length = 975 Score = 103 bits (52), Expect = 3e-19 Identities = 83/92 (90%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| |||||||||||||||||||||| ||||| |||||||||||||| || Sbjct: 758 aagggaccattgg-agaacctcgccgaccaccttgctgacccagtcaacaacaacgcctg 816 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 ||||| |||||||||||| || ||||| |||| Sbjct: 817 ggcctacgccaccaacttcgtccccggaaagt 848
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 101 bits (51), Expect = 1e-18 Identities = 85/95 (89%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 769 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcaacaacaacgc 827 Query: 69 gtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||| |||||||||||| || |||||||||| Sbjct: 828 atgggcctacgccaccaacttcgtccccggcaagt 862
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 101 bits (51), Expect = 1e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 37 gaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgccc 96 |||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||| Sbjct: 772 gaccacctcgccgaccccgtcaacaacaacgcatgggcctacgccaccaactttgtcccc 831 Query: 97 ggcaagt 103 ||||||| Sbjct: 832 ggcaagt 838
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 99.6 bits (50), Expect = 4e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||||||||| |||||||||||||||||||||| ||||| | |||||||| Sbjct: 2642 agaacctcgccgaccacctcaccgaccccgtcaacaacaacgcctgggcttacgccacca 2701 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 2702 acttcgtccccggcaagt 2719
>gb|AY389597.1| Hyacinthus orientalis chloroplast chlorophyll a/b-binding protein mRNA, partial cds Length = 575 Score = 93.7 bits (47), Expect = 3e-16 Identities = 84/95 (88%), Gaps = 1/95 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 |||||||| ||||||| ||||| | ||||| ||||| |||||||||||||||||||| || Sbjct: 377 ggcaaggggccattgg-agaacttggccgatcacctcgccgaccccgtcaacaacaatgc 435 Query: 69 gtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||||| Sbjct: 436 ctgggcttttgccaccaactttgtccccggcaagt 470
>gb|K00976.1|PETCAB102 Petunia major chlorophyll a/b binding protein (Cab) clone pCab102, 3' end and flank Length = 302 Score = 93.7 bits (47), Expect = 3e-16 Identities = 87/99 (87%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 5 cactggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaaca 64 |||||| || || ||||||| |||||||||| ||||||||||| |||||||| ||||||| Sbjct: 90 cactggaaaaggtccattgg-agaacctcgctgaccaccttgctgaccccgttaacaaca 148 Query: 65 acgcgtgggccttcgccaccaactttgtgcccggcaagt 103 | ||||||||||| ||||| |||||||| ||||| |||| Sbjct: 149 atgcgtgggcctttgccacaaactttgttcccggaaagt 187
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 93.7 bits (47), Expect = 3e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 37 gaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgccc 96 ||||| || ||||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 1127 gaccatctcgccgaccccgtcaacaacaacgcctgggccttcgccaccaacttcgtcccc 1186 Query: 97 ggcaagt 103 ||||||| Sbjct: 1187 ggcaagt 1193
>ref|NM_001036402.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.3 mRNA, complete cds Length = 3299 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 2564 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 2505 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 2504 acttcgtccccggaaagt 2487
>ref|NM_001036401.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant AT2G34410.2 mRNA, complete cds Length = 3338 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 2564 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 2505 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 2504 acttcgtccccggaaagt 2487
>ref|NM_128994.2| Arabidopsis thaliana LHB1B2; chlorophyll binding AT2G34420 (LHB1B2) transcript variant AT2G34420.1 mRNA, complete cds Length = 1354 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 774 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 833 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 834 acttcgtccccggaaagt 851
>ref|NM_179900.1| Arabidopsis thaliana LHB1B2 AT2G34420 (LHB1B2) transcript variant AT2G34420.2 mRNA, complete cds Length = 1312 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 732 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 791 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 792 acttcgtccccggaaagt 809
>gb|AY142513.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 829 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 719 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 778 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 779 acttcgtccccggaaagt 796
>gb|AY045806.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 1015 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 774 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 833 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 834 acttcgtccccggaaagt 851
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete sequence Length = 112763 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 93282 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 93223 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 93222 acttcgtccccggaaagt 93205 Score = 60.0 bits (30), Expect = 4e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| | || || || ||||||||||| || ||||||||||| |||| Sbjct: 96026 agaacctcgcggaccacttggctgatccagtcaacaacaatgcatgggccttcgctacca 96085 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 96086 acttcgtccccggaaagt 96103
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete sequence Length = 93060 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 80920 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 80979 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 80980 acttcgtccccggaaagt 80997 Score = 60.0 bits (30), Expect = 4e-06 Identities = 66/78 (84%) Strand = Plus / Minus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| | || || || ||||||||||| || ||||||||||| |||| Sbjct: 78176 agaacctcgcggaccacttggctgatccagtcaacaacaatgcatgggccttcgctacca 78117 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 78116 acttcgtccccggaaagt 78099
>gb|AY081587.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420) mRNA, complete cds Length = 883 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 719 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 778 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 779 acttcgtccccggaaagt 796
>gb|AY079110.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 719 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 778 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 779 acttcgtccccggaaagt 796
>gb|AY079101.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 798 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 719 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 778 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 779 acttcgtccccggaaagt 796
>gb|AY065125.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein (At2g34420; T31E10.24) mRNA, complete cds Length = 969 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 770 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 829 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 830 acttcgtccccggaaagt 847
>gb|AF419587.1|AF419587 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 770 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 829 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 830 acttcgtccccggaaagt 847
>gb|AF419548.1|AF419548 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 770 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 829 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 830 acttcgtccccggaaagt 847
>gb|AF428397.1|AF428397 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 1024 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 770 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 829 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 830 acttcgtccccggaaagt 847
>gb|AY039561.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 995 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 770 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 829 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 830 acttcgtccccggaaagt 847
>gb|AF372886.1|AF372886 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds Length = 969 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 770 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 829 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 830 acttcgtccccggaaagt 847
>emb|BX821952.1|CNS0AABH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL87ZD09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 949 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| |||||||||| || ||||||||||| |||||||||||||||| Sbjct: 751 agaacctcgccgaccattttgccgacccagttaacaacaacgcttgggccttcgccacca 810 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 811 acttcgtccccggaaagt 828
>emb|BX819530.1|CNS0A9V8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB87ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 291 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 90 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 149 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 150 acttcgtccccggaaagt 167
>emb|BX820019.1|CNS0A9C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS62ZC05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 903 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 751 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 810 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 811 acttcgtccccggaaagt 828
>emb|BX820007.1|CNS0A9CM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS5ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 885 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 754 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 813 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 814 acttcgtccccggaaagt 831
>emb|BX822910.1|CNS0A63G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB71ZG07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Minus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 165 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 106 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 105 acttcgtccccggaaagt 88
>emb|X64460.1|ATLH1B2 A.thaliana Lhb1B2 gene for photosystem II chlorophyll a/b binding protein Length = 1405 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 1019 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 1078 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 1079 acttcgtccccggaaagt 1096
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 91.7 bits (46), Expect = 1e-15 Identities = 80/90 (88%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 |||||||||||||||| || |||| ||||||||| |||||||||| |||||||||||||| Sbjct: 906 ggcaagggcccattgg-aggaccttgccgaccacattgccgaccctgtcaacaacaacgc 964 Query: 69 gtgggccttcgccaccaactttgtgcccgg 98 |||| | | ||||||||||| |||||||| Sbjct: 965 gtggctcattgccaccaacttcgtgcccgg 994
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 91.7 bits (46), Expect = 1e-15 Identities = 70/78 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||| ||||||||| | |||||||||||| ||||||||| |||||||||||||||| Sbjct: 1455 agaacctggccgaccacatcgccgaccccgtcgccaacaacgcctgggccttcgccacca 1514 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 1515 acttcgtccccggcaagt 1532
>gb|DQ252493.1| Solanum tuberosum clone 062G02 chlorophyll a-b binding protein 3C-like mRNA, complete cds Length = 1055 Score = 89.7 bits (45), Expect = 4e-15 Identities = 85/97 (87%), Gaps = 1/97 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| |||||||||||||| ||||| || ||||||||||| || Sbjct: 747 aagggtccattgg-agaaccttgccgaccaccttgctgacccagttaacaacaacgcttg 805 Query: 72 ggccttcgccaccaactttgtgcccggcaagtaagct 108 |||||| ||||| |||||||| ||||| |||| |||| Sbjct: 806 ggcctttgccacaaactttgttcccggaaagtgagct 842
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 87.7 bits (44), Expect = 2e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 34 gccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactt 89 ||||||||||| || |||||||||||||||||||| |||||||||||||||||||| Sbjct: 638 gccgaccacctcgctgaccccgtcaacaacaacgcctgggccttcgccaccaactt 693
>emb|X81808.1|PALHCB1 P.abies (L.)Karst. Lhcb1*1 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1078 Score = 87.7 bits (44), Expect = 2e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||| ||||| || ||||| |||||||||||||| ||||||| |||||||| Sbjct: 759 agaacctcgccgatcacctcgctgaccctgtcaacaacaacgcctgggcctacgccacca 818 Query: 86 actttgtgcccggcaa 101 ||||||| || ||||| Sbjct: 819 actttgtccctggcaa 834
>gb|M30620.1|TOMCBPE2 Tomato chlorophyll a/b-binding protein Cab-3A gene, 3' end Length = 351 Score = 87.7 bits (44), Expect = 2e-14 Identities = 81/92 (88%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| ||||||||| |||||||||| || ||||||||||| || Sbjct: 259 aagggtccattgg-agaaccttgccgaccacattgccgacccagttaacaacaacgcctg 317 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 |||||| ||||| |||||||| ||||| |||| Sbjct: 318 ggcctttgccacaaactttgttcccggaaagt 349
>emb|X02358.1|PECAB25 Petunia gene for chlorophyll a/b binding protein cab 25 Length = 1184 Score = 85.7 bits (43), Expect = 6e-14 Identities = 86/99 (86%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 5 cactggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaaca 64 |||||| || || ||||||| |||||||||| || |||||||| |||||||| ||||||| Sbjct: 932 cactggaaaaggtccattgg-agaacctcgctgatcaccttgctgaccccgttaacaaca 990 Query: 65 acgcgtgggccttcgccaccaactttgtgcccggcaagt 103 | ||||||||||| ||||| |||||||| ||||| |||| Sbjct: 991 atgcgtgggcctttgccacaaactttgttcccggaaagt 1029
>emb|X52742.1|NTCAB50 Tabacco Cab50 mRNA for major chlorophyll a/b binding protein Length = 964 Score = 85.7 bits (43), Expect = 6e-14 Identities = 86/99 (86%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 5 cactggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaaca 64 |||||| ||||| ||||||| ||||||| |||||||||||||| ||||| || ||||||| Sbjct: 772 cactggaaagggtccattgg-agaacctagccgaccaccttgctgacccagttaacaaca 830 Query: 65 acgcgtgggccttcgccaccaactttgtgcccggcaagt 103 | || ||| ||| ||||||||||||||| ||||| |||| Sbjct: 831 atgcctggtcctacgccaccaactttgtccccggaaagt 869
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 85.7 bits (43), Expect = 6e-14 Identities = 73/83 (87%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| | || ||||| |||||||||||||| ||||||| |||||||| Sbjct: 1601 agaacctcgctgaccacatcgctgacccagtcaacaacaacgcatgggcctacgccacca 1660 Query: 86 actttgtgcccggcaagtaagct 108 |||| || |||||||| |||||| Sbjct: 1661 acttcgtccccggcaactaagct 1683
>gb|U43707.1|PAU43707 Picea abies chlorophyll a/b binding protein of PS II mRNA, partial cds Length = 551 Score = 85.7 bits (43), Expect = 6e-14 Identities = 64/71 (90%) Strand = Plus / Plus Query: 28 aacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaac 87 ||||||||||| ||||| ||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 319 aacctcgccgatcacctggccgaccccgtcaacaacaacgcctgggcttacgccaccaac 378 Query: 88 tttgtgcccgg 98 || || ||||| Sbjct: 379 ttcgtccccgg 389
>gb|U21111.1|STU21111 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-1) gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 85.7 bits (43), Expect = 6e-14 Identities = 77/87 (88%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || ||||||||||| |||||||| ||||||||||| || Sbjct: 706 aagggtccattgg-agaaccttgctgaccaccttgcagaccccgttaacaacaacgcttg 764 Query: 72 ggccttcgccaccaactttgtgcccgg 98 ||| |||||||| |||||||| ||||| Sbjct: 765 ggctttcgccacaaactttgtccccgg 791
>emb|BX821638.1|CNS0A92F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL5ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 911 Score = 81.8 bits (41), Expect = 1e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| |||||||||||||| |||||||||||||||| Sbjct: 754 agaacctcgccgaccatttggccgacccagtcaacaacaacgcttgggccttcgccacca 813 Query: 86 a 86 | Sbjct: 814 a 814
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 81.8 bits (41), Expect = 1e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| | ||||||||||||||||||||||| ||||| || ||||| | Sbjct: 740 agaacctcgctgaccacatcgccgaccccgtcaacaacaacgcttgggcatttgccacaa 799 Query: 86 actttgtgcccggcaagtaag 106 |||| || |||||||| |||| Sbjct: 800 acttcgtccccggcaaataag 820
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 81.8 bits (41), Expect = 1e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 37 gaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgccc 96 ||||| || ||||||||||| |||||||| || |||||||||||||||||||| || ||| Sbjct: 907 gaccatctcgccgaccccgtaaacaacaatgcctgggccttcgccaccaacttcgtcccc 966 Query: 97 ggcaagtaa 105 ||||||||| Sbjct: 967 ggcaagtaa 975
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 81.8 bits (41), Expect = 1e-12 Identities = 57/61 (93%), Gaps = 1/61 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 |||||||||||||||| ||||||| ||||||||| |||||||||| |||||||||||||| Sbjct: 701 ggcaagggcccattgg-agaaccttgccgaccacattgccgaccctgtcaacaacaacgc 759 Query: 69 g 69 | Sbjct: 760 g 760
>gb|DQ226825.1| Boechera divaricarpa isolate SLW-B-H09 mRNA sequence Length = 775 Score = 79.8 bits (40), Expect = 4e-12 Identities = 80/92 (86%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| |||||||||||||||| | || || || |||||||||||||| || Sbjct: 540 aagggaccattgg-agaacctcgccgaccatttggctgatccagtcaacaacaacgcatg 598 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 |||||||||||||||||| || ||||| |||| Sbjct: 599 ggccttcgccaccaacttcgtccccggaaagt 630
>emb|X14506.1|PSCABIIB Pinus sylvestris cab II/1B mRNA for chlorophyll a/b-binding protein Length = 1006 Score = 79.8 bits (40), Expect = 4e-12 Identities = 67/76 (88%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| || ||||| || |||||||| ||||||||||| ||||||| |||||||| Sbjct: 794 agaacctcgctgatcacctggctgaccccgttaacaacaacgcctgggcctacgccacca 853 Query: 86 actttgtgcccggcaa 101 |||| || |||||||| Sbjct: 854 acttcgtccccggcaa 869
>gb|U39475.1|GMU39475 Glycine max chlorophyll a/b-binding protein (cab3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 977 Score = 79.8 bits (40), Expect = 4e-12 Identities = 80/92 (86%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || || |||||||| ||||| ||||||||||| || || Sbjct: 731 aagggtccattgg-agaaccttgctgatcaccttgcggacccagtcaacaacaatgcctg 789 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 ||||| |||||||||||| || |||||||||| Sbjct: 790 ggcctacgccaccaacttcgtccccggcaagt 821
>gb|BT014208.1| Lycopersicon esculentum clone 133385R, mRNA sequence Length = 958 Score = 77.8 bits (39), Expect = 2e-11 Identities = 76/87 (87%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || ||||||||||| |||||||| |||||||| || || Sbjct: 750 aagggtccattgg-agaaccttgctgaccaccttgcagaccccgtaaacaacaatgcctg 808 Query: 72 ggccttcgccaccaactttgtgcccgg 98 ||| |||||||| |||||||| ||||| Sbjct: 809 ggctttcgccacaaactttgtccccgg 835
>emb|X52744.1|NTCAB40 Tabacco Cab40 mRNA for major chlorophyll a/b binding protein Length = 1080 Score = 77.8 bits (39), Expect = 2e-11 Identities = 85/99 (85%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 5 cactggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaaca 64 |||||| ||||| ||||||| ||||||| |||||||||||||| ||||| || ||||||| Sbjct: 768 cactggaaagggtccattgg-agaaccttgccgaccaccttgcagacccagttaacaaca 826 Query: 65 acgcgtgggccttcgccaccaactttgtgcccggcaagt 103 | || ||||||| ||||| |||||||| ||||| |||| Sbjct: 827 atgcctgggcctatgccacaaactttgttcccggaaagt 865
>gb|K00974.1|PETCAB4 Petunia major chlorophyll a/b binding protein (Cab) clone pCab4, 3' end Length = 387 Score = 77.8 bits (39), Expect = 2e-11 Identities = 76/87 (87%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 6 actggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaa 65 ||||| ||||| ||||||| ||||||| |||||||||||||||||||| || |||||||| Sbjct: 298 actggaaagggtccattgg-agaaccttgccgaccaccttgccgacccagttaacaacaa 356 Query: 66 cgcgtgggccttcgccaccaactttgt 92 || ||| ||| |||||| |||||||| Sbjct: 357 tgcttggtcctacgccacaaactttgt 383
>gb|M30622.1|TOMCBPF2 Tomato chlorophyll a/b-binding protein Cab-3B gene, 3' end Length = 351 Score = 77.8 bits (39), Expect = 2e-11 Identities = 85/99 (85%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 5 cactggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaaca 64 |||||| ||||| ||||||| |||| || ||||||||| |||| ||||| || ||||||| Sbjct: 252 cactggaaagggtccattgg-agaatcttgccgaccacattgctgacccagttaacaaca 310 Query: 65 acgcgtgggccttcgccaccaactttgtgcccggcaagt 103 |||| |||||||| ||||| |||||||| ||||| |||| Sbjct: 311 acgcctgggcctttgccacaaactttgttcccggaaagt 349
>gb|AY430082.1| Trifolium pratense chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 987 Score = 75.8 bits (38), Expect = 6e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||| || ||||| ||||| ||||| |||||||||||||| ||||| || ||||||| Sbjct: 774 agaaccttgctgaccatcttgctgacccagtcaacaacaacgcctgggcttttgccacca 833 Query: 86 actttgtgcccggcaagt 103 ||||||| ||||| |||| Sbjct: 834 actttgttcccggaaagt 851
>emb|BX821505.1|CNS0A93G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL46ZF04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 959 Score = 75.8 bits (38), Expect = 6e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||||||||| | |||||||| ||| |||||||||| ||||||| |||||||| Sbjct: 761 agaacctcgccgaccatttggccgacccagtctacaacaacgcttgggcctccgccacca 820 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 821 acttcgtccccggaaagt 838
>gb|AF072931.1|AF072931 Medicago sativa chlorophyll a/b binding protein (CARCAB1) mRNA, complete cds Length = 983 Score = 75.8 bits (38), Expect = 6e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||| || || || ||||||||||| |||||||||||||| ||||||| ||||||| Sbjct: 773 agaaccttgctgatcatcttgccgacccagtcaacaacaacgcatgggcctatgccacca 832 Query: 86 actttgtgcccggcaagt 103 ||||||| ||||| |||| Sbjct: 833 actttgttcccggaaagt 850
>gb|AF034631.1|AF034631 Panax ginseng chlorophyll a/b binding protein of LHCII type I precursor (CAB) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1015 Score = 75.8 bits (38), Expect = 6e-11 Identities = 81/94 (86%), Gaps = 1/94 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||||||||||| ||||||| ||||||| |||||| || || || |||||||| || || Sbjct: 732 aagggcccattgg-agaacctagccgacccccttgctgatccagtgaacaacaatgcatg 790 Query: 72 ggccttcgccaccaactttgtgcccggcaagtaa 105 ||||| |||||||||||||| ||||| |||||| Sbjct: 791 ggcctatgccaccaactttgtccccggaaagtaa 824
>dbj|D00571.1|PYPLHABBP Pyrus pyrifolia var. culta mRNA for light harvesting a/b binding protein, complete cds Length = 1055 Score = 73.8 bits (37), Expect = 2e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||| ||||| ||||| ||||||||||| |||||||| || ||||||| |||||||| Sbjct: 820 agaaccttgccgatcacctggccgaccccgtgaacaacaatgcctgggcctacgccacca 879 Query: 86 actttgtgcccgg 98 |||| || ||||| Sbjct: 880 acttcgtccccgg 892
>emb|X14505.1|PSCABIIA Pinus sylvestris cab II/1A mRNA for chlorophyll a/b-binding protein Length = 1083 Score = 73.8 bits (37), Expect = 2e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||||||||| ||||| ||||||||||| |||||||| || ||||||| |||||||| Sbjct: 813 agaacctcgccgatcacctggccgaccccgtgaacaacaatgcctgggcctacgccacca 872 Query: 86 a 86 | Sbjct: 873 a 873
>gb|U21113.1|STU21113 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-4) gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 73.8 bits (37), Expect = 2e-10 Identities = 71/81 (87%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || ||||||||||| |||||||| |||||||| || || Sbjct: 706 aagggtccattgg-agaaccttgctgaccaccttgcagaccccgttaacaacaatgcctg 764 Query: 72 ggccttcgccaccaactttgt 92 ||||| |||||| |||||||| Sbjct: 765 ggcctacgccacaaactttgt 785
>emb|X14341.1|SOCABP S.oleracea chloroplast mRNA for chlorophyll a/b binding protein Length = 980 Score = 73.8 bits (37), Expect = 2e-10 Identities = 79/92 (85%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||||||||||| | |||||||| ||||||||||| ||||| || |||||||| || || Sbjct: 761 aagggcccattggaa-aacctcgctgaccaccttgctgacccggttaacaacaatgcttg 819 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 | ||| |||||||||||||| ||||| |||| Sbjct: 820 gaactttgccaccaactttgtccccggaaagt 851
>dbj|AB012637.1| Nicotiana sylvestris Lhcb1*2, Lhcb1*3, Lhcb1*4 genes for light harvesting chlorophyll a/b-binding protein, complete cds Length = 7965 Score = 73.8 bits (37), Expect = 2e-10 Identities = 80/93 (86%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 6 actggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaa 65 ||||| ||||||||||| | ||||||| || ||||||||||| ||||| || |||||||| Sbjct: 7574 actggaaagggcccattag-agaaccttgctgaccaccttgcagacccagttaacaacaa 7632 Query: 66 cgcgtgggccttcgccaccaactttgtgcccgg 98 || ||||||| |||||| |||||||| ||||| Sbjct: 7633 tgcttgggcctacgccacaaactttgtccccgg 7665 Score = 69.9 bits (35), Expect = 4e-09 Identities = 75/87 (86%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||||||||||| ||||||| || ||||||||||| ||||| || ||||||||||| || Sbjct: 5040 aagggcccattgg-agaaccttgctgaccaccttgcagaccctgttaacaacaacgcctg 5098 Query: 72 ggccttcgccaccaactttgtgcccgg 98 | ||| ||||| |||||||| ||||| Sbjct: 5099 gtcctatgccacaaactttgtccccgg 5125 Score = 54.0 bits (27), Expect = 2e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||| || ||||| ||||| ||||| || ||||||||||| ||| ||| |||||| | Sbjct: 2600 agaaccttgctgaccatcttgctgacccagttaacaacaacgcctggtcctacgccacaa 2659 Query: 86 actttgt 92 ||||||| Sbjct: 2660 actttgt 2666
>emb|AJ313013.1|PCO313013 Pinus contorta cab gene for chlorophyll a/b binding protein Length = 1197 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| || ||||| ||||||||||| | ||||||||| ||||||| ||||||| Sbjct: 809 agaacctcgctgatcacctggccgaccccgttagcaacaacgcctgggcctatgccacca 868 Query: 86 actttgtgcccggcaa 101 |||| || |||||||| Sbjct: 869 acttcgtccccggcaa 884
>gb|S73603.1| Pinus thunbergii chlorophyll a/b-binding protein (LHCPII) mRNA, complete cds Length = 998 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||| | || ||||| || |||||||| ||||||||||| ||||||| |||||||| Sbjct: 785 agaacctcactgatcacctggctgaccccgttaacaacaacgcctgggcctacgccacca 844 Query: 86 actttgtgcccggcaa 101 |||| || |||||||| Sbjct: 845 acttcgtccccggcaa 860
>emb|X67714.1|PCCABA P.contorta cab gene for chlorophyll a/b binding protein Length = 2574 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| || ||||| ||||||||||| | ||||||||| ||||||| ||||||| Sbjct: 1887 agaacctcgctgatcacctggccgaccccgttagcaacaacgcctgggcctatgccacca 1946 Query: 86 actttgtgcccggcaa 101 |||| || |||||||| Sbjct: 1947 acttcgtccccggcaa 1962
>emb|X12981.1|GMCAB3 Soybean Cab3 gene for PSII LHCII chlorophyll a/b binding protein Length = 1361 Score = 71.9 bits (36), Expect = 1e-09 Identities = 79/92 (85%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||||||||| |||||||| | || |||||||||||||| || Sbjct: 950 aagggtccattgg-agaacctcgccgatcaccttgctggacctgtcaacaacaacgcctg 1008 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 ||||| ||||||||||| || ||||| |||| Sbjct: 1009 ggcctatgccaccaacttcgtccccggaaagt 1040
>gb|AF003128.1|AF003128 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 71.9 bits (36), Expect = 1e-09 Identities = 70/80 (87%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || || |||||||||||||| || |||||||| || || Sbjct: 724 aagggtccattgg-agaaccttgctgatcaccttgccgacccagttaacaacaatgcttg 782 Query: 72 ggccttcgccaccaactttg 91 |||||||||||| ||||||| Sbjct: 783 ggccttcgccacaaactttg 802
>gb|U51633.1|PPU51633 Pinus palustris type 1 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb1) mRNA, partial cds Length = 414 Score = 71.9 bits (36), Expect = 1e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| || ||||| ||||||||||| ||||||||||| ||||||| ||||||| Sbjct: 210 agaacctcgctgatcacctggccgaccccgttaacaacaacgcctgggcctatgccacca 269 Query: 86 actt 89 |||| Sbjct: 270 actt 273
>gb|L07119.1|COTIIABINA Gossypium hirsutum chloroplast photosystem II chlorophyll A/B-binding protein gene, complete cds Length = 1260 Score = 71.9 bits (36), Expect = 1e-09 Identities = 79/92 (85%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||| | || ||||||||||| ||||| ||||||||||| || || Sbjct: 900 aagggaccattgg-agaacttggctgaccaccttgctgacccagtcaacaacaatgcttg 958 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 ||||| |||||||||||||| ||||| |||| Sbjct: 959 ggcctatgccaccaactttgtccccggaaagt 990
>dbj|AB012638.1| Nicotiana sylvestris Lhcb1*5, Lhcb1*6 genes for light harvesting chlorophyll a/b-binding protein, complete cds Length = 7299 Score = 71.9 bits (36), Expect = 1e-09 Identities = 79/92 (85%), Gaps = 1/92 (1%) Strand = Plus / Minus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| |||||||| ||||| ||||| || ||||||||||| || Sbjct: 1962 aagggtccattgg-agaaccttgccgaccatcttgctgacccagttaacaacaacgcttg 1904 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 ||||| ||||| |||||||| ||||| |||| Sbjct: 1903 ggcctatgccacaaactttgttcccggaaagt 1872 Score = 60.0 bits (30), Expect = 4e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||| |||||||||||||| ||||| || |||||||| || ||||| | ||||| | Sbjct: 5084 agaaccttgccgaccaccttgctgacccagttaacaacaatgcctgggcatatgccacta 5143 Query: 86 actttgtgcccggcaagt 103 ||||||| ||||| |||| Sbjct: 5144 actttgttcccggaaagt 5161
>gb|AC139600.16| Medicago truncatula clone mth2-20m4, complete sequence Length = 124732 Score = 69.9 bits (35), Expect = 4e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 49 gaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 |||||||||||||||||||| |||||||| ||||| |||||||| ||||| |||| Sbjct: 161 gaccccgtcaacaacaacgcttgggcctttgccacaaactttgtccccggaaagt 215 Score = 63.9 bits (32), Expect = 2e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 28 aacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaac 87 ||||| || |||||| | || ||||| || ||||||||||| |||||||||||||| ||| Sbjct: 8648 aaccttgctgaccacatcgctgacccagttaacaacaacgcttgggccttcgccacaaac 8589 Query: 88 tttgtgcccggcaagt 103 ||||| ||||| |||| Sbjct: 8588 tttgtccccggaaagt 8573
>emb|X02357.1|PECAB13 Petunia gene for chlorophyll a/b binding protein cab 13 Length = 1019 Score = 69.9 bits (35), Expect = 4e-09 Identities = 59/67 (88%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| || |||||||| |||||||| |||||||| ||||||||||| ||||| | Sbjct: 843 agaacctcgctgatcaccttgctgaccccgttaacaacaatgcgtgggcctttgccacaa 902 Query: 86 actttgt 92 | ||||| Sbjct: 903 attttgt 909
>emb|AJ318069.1|STU318069 Solanum tuberosum mRNA for ferredoxin-thioredoxin-reductase catalytic subunit B (ftrbpot gene) Length = 701 Score = 69.9 bits (35), Expect = 4e-09 Identities = 76/87 (87%), Gaps = 2/87 (2%) Strand = Plus / Minus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || ||||||||||| |||||||| ||||||||||| | Sbjct: 90 aagggtccattgg-agaaccttgctgaccaccttgcagaccccgttaacaacaacgc-tt 33 Query: 72 ggccttcgccaccaactttgtgcccgg 98 ||| |||||||| |||||||| ||||| Sbjct: 32 ggctttcgccacaaactttgtccccgg 6
>ref|NM_102733.2| Arabidopsis thaliana CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding AT1G29930 (CAB1) mRNA, complete cds Length = 1044 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 58 aacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 823 aacaacaacgcatgggccttcgccaccaactttgttcccggaaagt 868
>ref|NM_102731.2| Arabidopsis thaliana CAB3 (CHLOROPHYLL A/B BINDING PROTEIN 3); chlorophyll binding AT1G29910 (CAB3) mRNA, complete cds Length = 1020 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| ||||||||||| ||||||||||| ||||| |||| Sbjct: 798 gccgatccagtcaacaacaacgcatgggccttcgcaaccaactttgttcccggaaagt 855
>ref|NM_102732.2| Arabidopsis thaliana CAB2; chlorophyll binding AT1G29920 (CAB2) mRNA, complete cds Length = 1176 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 812 gccgatccagtcaacaacaacgcttgggcctttgccaccaactttgttcccggaaagt 869
>gb|BT015572.1| Arabidopsis thaliana At1g29910 mRNA sequence Length = 762 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 703 gccgatccagtcaacaacaacgcttgggcctttgccaccaactttgttcccggaaagt 760
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||| ||||||| | |||||||||||| ||||||||| ||||| | |||||||| Sbjct: 79051 agaacctcttcgaccacgtcgccgaccccgtcgccaacaacgcctgggcatacgccacca 78992 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 78991 acttcgtccccggcaagt 78974
>gb|DQ226787.1| Boechera divaricarpa isolate SLW-B-B06 mRNA sequence Length = 827 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 58 aacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 585 aacaacaacgcatgggccttcgccaccaactttgttcccggaaagt 630
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||| ||||||| | |||||||||||| ||||||||| ||||| | |||||||| Sbjct: 21808765 agaacctcttcgaccacgtcgccgaccccgtcgccaacaacgcctgggcatacgccacca 21808824 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 21808825 acttcgtccccggcaagt 21808842
>emb|X16436.1|SACAB Mustard cab gene for chlorophyll a/b-binding protein Length = 2774 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||| ||||||||||| | || || || |||||||||||||| |||||||||||||||| Sbjct: 2297 agaatctcgccgaccatttggctgatccagtcaacaacaacgcatgggccttcgccacca 2356 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 2357 acttcgtccccggaaagt 2374
>gb|BT000726.1| Arabidopsis thaliana clone RAFL06-67-G16 (R11472) putative photosystem II type I chlorophyll a /b binding protein (At1g29920) mRNA, complete cds Length = 1044 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 798 gccgatccagtcaacaacaacgcttgggcctttgccaccaactttgttcccggaaagt 855
>gb|AY091169.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At1g29930) mRNA, complete cds Length = 835 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 58 aacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 757 aacaacaacgcatgggccttcgccaccaactttgttcccggaaagt 802
>gb|AY050935.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At1g29930) mRNA, complete cds Length = 1014 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 58 aacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 823 aacaacaacgcatgggccttcgccaccaactttgttcccggaaagt 868
>gb|AY128345.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein, putative (At1g29920) mRNA, complete cds Length = 994 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 798 gccgatccagtcaacaacaacgcttgggcctttgccaccaactttgttcccggaaagt 855
>gb|AY114594.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910) mRNA, complete cds Length = 870 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| ||||||||||| ||||||||||| ||||| |||| Sbjct: 745 gccgatccagtcaacaacaacgcatgggccttcgcaaccaactttgttcccggaaagt 802
>gb|AY081572.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29920) mRNA, complete cds Length = 898 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 745 gccgatccagtcaacaacaacgcttgggcctttgccaccaactttgttcccggaaagt 802
>gb|AY065165.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29910; F1N18.5) mRNA, complete cds Length = 1019 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| ||||||||||| ||||||||||| ||||| |||| Sbjct: 798 gccgatccagtcaacaacaacgcatgggccttcgcaaccaactttgttcccggaaagt 855
>gb|AY062814.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29920; F1N18.4) mRNA, complete cds Length = 1007 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 797 gccgatccagtcaacaacaacgcttgggcctttgccaccaactttgttcccggaaagt 854
>gb|AY060500.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 804 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 745 gccgatccagtcaacaacaacgcttgggcctttgccaccaactttgttcccggaaagt 802
>gb|AY058180.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1019 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 58 aacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 823 aacaacaacgcatgggccttcgccaccaactttgttcccggaaagt 868
>gb|AF428359.1|AF428359 Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1045 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 58 aacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 823 aacaacaacgcatgggccttcgccaccaactttgttcccggaaagt 868
>gb|AY054198.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 1027 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 791 gccgatccagtcaacaacaacgcttgggcctttgccaccaactttgttcccggaaagt 848
>gb|AY052237.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 1027 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 797 gccgatccagtcaacaacaacgcttgggcctttgccaccaactttgttcccggaaagt 854
>gb|AY045673.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 999 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 58 aacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 823 aacaacaacgcatgggccttcgccaccaactttgttcccggaaagt 868
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||| ||||||| | |||||||||||| ||||||||| ||||| | |||||||| Sbjct: 21801794 agaacctcttcgaccacgtcgccgaccccgtcgccaacaacgcctgggcatacgccacca 21801853 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 21801854 acttcgtccccggcaagt 21801871
>emb|BX814964.1|CNS0AE8Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZE02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 307 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 58 aacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 127 aacaacaacgcatgggccttcgccaccaactttgttcccggaaagt 172
>emb|BX815726.1|CNS0ACD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS89ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 58 aacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 792 aacaacaacgcatgggccttcgccaccaactttgttcccggaaagt 837
>gb|AC022455.5|AC022455 Arabidopsis thaliana chromosome 1 BAC T1P2 genomic sequence, complete sequence Length = 82053 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 58 aacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 703 aacaacaacgcatgggccttcgccaccaactttgttcccggaaagt 748
>gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N18 genomic sequence, complete sequence Length = 101075 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| ||||||||||| ||||||||||| ||||| |||| Sbjct: 22483 gccgatccagtcaacaacaacgcatgggccttcgcaaccaactttgttcccggaaagt 22540 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 19837 gccgatccagtcaacaacaacgcttgggcctttgccaccaactttgttcccggaaagt 19894 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 58 aacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 16158 aacaacaacgcatgggccttcgccaccaactttgttcccggaaagt 16113
>gb|AY086905.1| Arabidopsis thaliana clone 29298 mRNA, complete sequence Length = 1041 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 812 gccgatccagtcaacaacaacgcttgggcctttgccaccaactttgttcccggaaagt 869
>emb|X15894.1|SACAB1 Sinapsis alba cab-1 gene for chlorophyll a/b-binding polypeptide Length = 2775 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||| ||||||||||| | || || || |||||||||||||| |||||||||||||||| Sbjct: 2298 agaatctcgccgaccatttggctgatccagtcaacaacaacgcatgggccttcgccacca 2357 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 2358 acttcgtccccggaaagt 2375
>emb|X58229.1|NTCAB7 Tobacco CAB7 gene for chlorophyll a/b binding protein Length = 1656 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 40 caccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggc 99 |||||||| |||||||| ||||||||||| ||||||| ||||| |||||||| ||||| Sbjct: 1240 caccttgctgaccccgttaacaacaacgcctgggcctatgccacaaactttgtccccgga 1299 Query: 100 aagtaa 105 |||||| Sbjct: 1300 aagtaa 1305
>emb|X03909.1|ATLHCP3 A.thaliana gene (LHCP AB 140) for chlorophyll a/b binding protein Length = 1109 Score = 67.9 bits (34), Expect = 2e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 58 aacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||||||| ||||||||||||||||||||||| ||||| |||| Sbjct: 974 aacaacaacgcatgggccttcgccaccaactttgttcccggaaagt 1019
>emb|X03908.1|ATLHCP2 A.thaliana gene (LHCP AB 180) for chlorophyll a/b binding protein Length = 1060 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| ||||||||||| ||||||||||| ||||| |||| Sbjct: 951 gccgatccagtcaacaacaacgcatgggccttcgcaaccaactttgttcccggaaagt 1008
>emb|X03907.1|ATLHCP1 A.thaliana gene (LHCP AB 165) for chlorophyll a/b binding protein Length = 999 Score = 67.9 bits (34), Expect = 2e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 890 gccgatccagtcaacaacaacgcttgggcctttgccaccaactttgttcccggaaagt 947
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||| ||||||| | |||||||||||| ||||||||| ||||| | |||||||| Sbjct: 764 agaacctcttcgaccacgtcgccgaccccgtcgccaacaacgcctgggcatacgccacca 823 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 824 acttcgtccccggcaagt 841
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||| ||||||| | |||||||||||| ||||||||| ||||| | |||||||| Sbjct: 339 agaacctcttcgaccacgtcgccgaccccgtcgccaacaacgcctgggcatacgccacca 398 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 399 acttcgtccccggcaagt 416
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 67.9 bits (34), Expect = 2e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||| ||||||| | |||||||||||| ||||||||| ||||| | |||||||| Sbjct: 753 agaacctcttcgaccacgtcgccgaccccgtcgccaacaacgcctgggcatacgccacca 812 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 813 acttcgtccccggcaagt 830
>dbj|AB012640.1| Nicotiana sylvestris Lhcb1*8 gene for light harvesting chlorophyll a/b-binding protein, complete cds Length = 3102 Score = 67.9 bits (34), Expect = 2e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 40 caccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggc 99 |||||||| |||||||| ||||||||||| ||||||| ||||| |||||||| ||||| Sbjct: 2643 caccttgctgaccccgttaacaacaacgcctgggcctatgccacaaactttgtccccgga 2702 Query: 100 aagtaa 105 |||||| Sbjct: 2703 aagtaa 2708
>gb|AY389549.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 3C (LHCP) mRNA, partial cds Length = 661 Score = 65.9 bits (33), Expect = 6e-08 Identities = 70/81 (86%), Gaps = 1/81 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 |||||||| ||| ||| ||||| | ||||| ||||||||||| |||||||||||||| || Sbjct: 579 ggcaaggggccactgg-agaacttggccgatcaccttgccgatcccgtcaacaacaatgc 637 Query: 69 gtgggccttcgccaccaactt 89 ||||| || ||||||||||| Sbjct: 638 ctgggcgtttgccaccaactt 658
>gb|M14449.1|TOMCBPG Tomato chlorophyll a/b-binding protein gene Cab-1D, complete cds Length = 351 Score = 65.9 bits (33), Expect = 6e-08 Identities = 79/93 (84%), Gaps = 1/93 (1%) Strand = Plus / Plus Query: 6 actggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaa 65 ||||| ||||| ||||||| ||||||| || || |||||||| ||||| || |||||||| Sbjct: 253 actggaaagggaccattgg-agaaccttgctgatcaccttgcagacccagtaaacaacaa 311 Query: 66 cgcgtgggccttcgccaccaactttgtgcccgg 98 ||| ||| ||| |||||| |||||||| ||||| Sbjct: 312 cgcctggtcctacgccactaactttgttcccgg 344
>emb|X74731.1|AHLHCB A.hypochondriacus Lhcb1*Ah1 mRNA Length = 699 Score = 63.9 bits (32), Expect = 2e-07 Identities = 78/92 (84%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||||||||||| ||||||| || ||||| ||||| ||||| || |||||||| || || Sbjct: 469 aagggcccattgg-agaaccttgctgaccatcttgctgacccggttaacaacaatgcttg 527 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 ||||| || ||||||||||| ||||| |||| Sbjct: 528 ggcctatgctaccaactttgtacccggaaagt 559
>gb|K00975.1|PETCAB10 Petunia major chlorophyll a/b binding protein (Cab) clone pCab10, 3' end and flank Length = 367 Score = 63.9 bits (32), Expect = 2e-07 Identities = 78/92 (84%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || ||||| |||||||| || || ||||||||||| || Sbjct: 139 aagggtccattgg-agaaccttgctgaccatcttgccgatccagttaacaacaacgcttg 197 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 | ||| |||||| |||||||| ||||| |||| Sbjct: 198 gtcctacgccacaaactttgttcccggaaagt 229
>gb|AF022739.1|AF022739 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1100 Score = 63.9 bits (32), Expect = 2e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 36 cgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcc 95 ||||||| | |||||||||||| ||||||||| ||||| | ||||||||| ||||| || Sbjct: 770 cgaccacgtcgccgaccccgtcgccaacaacgcctgggcatacgccaccaattttgtccc 829 Query: 96 cggcaagt 103 |||||||| Sbjct: 830 cggcaagt 837
>gb|AF003129.1|AF003129 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1011 Score = 63.9 bits (32), Expect = 2e-07 Identities = 78/92 (84%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| |||||||||| || || ||||| ||||| || |||||||| || || Sbjct: 768 aagggtccattgg-agaacctcgctgatcatcttgcagacccagttaacaacaatgcttg 826 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 ||||||||| || ||||||| |||||||||| Sbjct: 827 ggccttcgctacaaactttgctcccggcaagt 858
>emb|X68333.1|HHLHC H.helix mRNA for light harvesting chlorophyll a/b binding protein Length = 686 Score = 63.9 bits (32), Expect = 2e-07 Identities = 78/92 (84%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| |||||||| ||||| || || || |||||||| || || Sbjct: 490 aagggtccattgg-agaacctagccgaccatcttgctgatccagtaaacaacaatgcatg 548 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 ||||| |||||||||||||| ||||| |||| Sbjct: 549 ggcctatgccaccaactttgtccccggaaagt 580
>gb|M30618.1|TOMCBPD2 Tomato chlorophyll a/b-binding protein Cab-1C gene, 3' end Length = 351 Score = 63.9 bits (32), Expect = 2e-07 Identities = 78/92 (84%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || || |||||||| ||||| || ||||||||||| || Sbjct: 259 aagggtccattgg-agaaccttgctgatcaccttgcagacccagtaaacaacaacgcctg 317 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 ||| || ||||| |||||||| ||||| |||| Sbjct: 318 ggcttttgccacaaactttgttcccggaaagt 349
>gb|M30616.1|TOMCBPC2 Tomato chlorophyll a/b-binding protein Cab-1A gene , 3' end Length = 351 Score = 63.9 bits (32), Expect = 2e-07 Identities = 78/92 (84%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || || |||||||| ||||| || ||||||||||| || Sbjct: 259 aagggtccattgg-agaaccttgctgatcaccttgcagaccctgtaaacaacaacgcctg 317 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 ||| || ||||| |||||||| ||||| |||| Sbjct: 318 ggcatttgccacaaactttgttcccggaaagt 349
>emb|AJ131044.1|CAR131044 Cicer arietinum mRNA for chlorophyll a/b binding protein Length = 983 Score = 61.9 bits (31), Expect = 9e-07 Identities = 83/99 (83%), Gaps = 1/99 (1%) Strand = Plus / Plus Query: 5 cactggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaaca 64 |||||| ||||| || |||| ||||||| || ||||| ||| | ||||| |||||||||| Sbjct: 716 cactggaaagggtcctttgg-agaaccttgctgaccatctttctgaccctgtcaacaaca 774 Query: 65 acgcgtgggccttcgccaccaactttgtgcccggcaagt 103 | || ||||||| |||||||||||||| ||||| |||| Sbjct: 775 atgcatgggcctatgccaccaactttgttcccggaaagt 813
>emb|Z75663.1|AGCHLABBP A.graveolens mRNA for chlorophyll a/b binding protein Length = 963 Score = 61.9 bits (31), Expect = 9e-07 Identities = 58/67 (86%) Strand = Plus / Plus Query: 37 gaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgccc 96 ||||||||||| ||||| || |||||||| || |||||||| ||||| |||||||| ||| Sbjct: 769 gaccaccttgcagaccctgttaacaacaatgcctgggcctttgccactaactttgttccc 828 Query: 97 ggcaagt 103 || |||| Sbjct: 829 ggaaagt 835
>emb|X16647.1|RSCHABBP Radish mRNA for chlorophyll a/b binding protein of photosystem II Length = 518 Score = 61.9 bits (31), Expect = 9e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 49 gaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| |||||||||||||| ||||||||||| |||||||| || ||||| |||| Sbjct: 319 gacccagtcaacaacaacgcatgggccttcgctaccaacttcgtccccggaaagt 373
>gb|U21114.1|STU21114 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-5) gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 61.9 bits (31), Expect = 9e-07 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || ||||||||||| |||||||| ||||||||||| || Sbjct: 706 aagggtccattgg-agaaccttgcagaccaccttgcagaccccgttaacaacaacgcctg 764 Query: 72 ggccttcgccaccaactttgtgcccgg 98 | | | ||||| |||||||| ||||| Sbjct: 765 gtcttatgccacaaactttgttcccgg 791
>gb|U21112.1|STU21112 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-3 gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 61.9 bits (31), Expect = 9e-07 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || ||||||||||| |||||||| ||||||||||| || Sbjct: 706 aagggtccattgg-agaaccttgctgaccaccttgcagaccccgttaacaacaacgcctg 764 Query: 72 ggccttcgccaccaactttgtgcccgg 98 | | | ||||| |||||||| ||||| Sbjct: 765 gtcttatgccacaaactttgtccccgg 791
>gb|U20983.1|STU20983 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-2) gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 61.9 bits (31), Expect = 9e-07 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| |||| || || ||||||||||| || || ||||||||||| || || Sbjct: 706 aagggtccattgg-agaatcttgctgaccaccttgcagatccagtcaacaacaatgcatg 764 Query: 72 ggccttcgccaccaactttgtgcccgg 98 |||||| ||||| |||||||| ||||| Sbjct: 765 ggcctttgccacaaactttgttcccgg 791
>gb|M15214.1|TOMCBPH Tomato chlorophyll a/b-binding protein gene Cab-3T, complete cds Length = 339 Score = 61.9 bits (31), Expect = 9e-07 Identities = 55/63 (87%) Strand = Plus / Plus Query: 41 accttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggca 100 ||||||||||||| || |||||||||| |||||||| ||||| |||||||| ||||| | Sbjct: 275 accttgccgacccagttaacaacaacgtctgggcctttgccacaaactttgttcccggaa 334 Query: 101 agt 103 ||| Sbjct: 335 agt 337
>gb|M14444.1|TOMCBPB Tomato chlorophyll a/b-binding protein gene Cab-3C, complete cds Length = 1135 Score = 61.9 bits (31), Expect = 9e-07 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || ||||| || || ||||| ||||| ||||| || || Sbjct: 914 aagggtccattgg-agaaccttgctgaccatctcgctgacccagtcaataacaatgcttg 972 Query: 72 ggccttcgccaccaactttgtgcccgg 98 |||||||||||| |||||||| ||||| Sbjct: 973 ggccttcgccacaaactttgtccccgg 999
>dbj|AB012641.1| Nicotiana sylvestris Lhcb1*9 gene for light harvesting chlorophyll a/b-binding protein, complete cds Length = 3386 Score = 61.9 bits (31), Expect = 9e-07 Identities = 46/51 (90%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggcct 76 ||||||| || ||||||||||||||||| || ||||||||||| ||||||| Sbjct: 2175 agaaccttgctgaccaccttgccgacccagttaacaacaacgcttgggcct 2225
>dbj|AB012636.1| Nicotiana sylvestris Lhcb1*1 gene for light harvesting chlorophyll a/b-binding protein, complete cds Length = 3659 Score = 61.9 bits (31), Expect = 9e-07 Identities = 74/87 (85%), Gaps = 1/87 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||||||||| | ||||||| || ||||||||||| ||||| || |||||||| || || Sbjct: 842 aagggcccattag-agaaccttgctgaccaccttgcagacccagttaacaacaatgcttg 900 Query: 72 ggccttcgccaccaactttgtgcccgg 98 ||| | |||||| |||||||| ||||| Sbjct: 901 ggcgtacgccacaaactttgtccccgg 927
>ref|NM_128995.2| Arabidopsis thaliana LHB1B1; chlorophyll binding AT2G34430 (LHB1B1) mRNA, complete cds Length = 1008 Score = 60.0 bits (30), Expect = 4e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| | || || || ||||||||||| || ||||||||||| |||| Sbjct: 784 agaacctcgcggaccacttggctgatccagtcaacaacaatgcatgggccttcgctacca 843 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 844 acttcgtccccggaaagt 861
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 740 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 798 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 799 ctgggtctacgccaccaa 816
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 764 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 822 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 823 ctgggtctacgccaccaa 840
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 764 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 822 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 823 ctgggtctacgccaccaa 840
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 766 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 824 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 825 ctgggtctacgccaccaa 842
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 769 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 827 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 828 ctgggtctacgccaccaa 845
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 769 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 827 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 828 ctgggtctacgccaccaa 845
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 771 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 829 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 830 ctgggtctacgccaccaa 847
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 804 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 862 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 863 ctgggtctacgccaccaa 880
>gb|AF339687.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 851 Score = 60.0 bits (30), Expect = 4e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| | || || || ||||||||||| || ||||||||||| |||| Sbjct: 722 agaacctcgcggaccacttggctgatccagtcaacaacaatgcatgggccttcgctacca 781 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 782 acttcgtccccggaaagt 799
>gb|AF326864.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At2g34430) mRNA, complete cds Length = 1019 Score = 60.0 bits (30), Expect = 4e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| | || || || ||||||||||| || ||||||||||| |||| Sbjct: 784 agaacctcgcggaccacttggctgatccagtcaacaacaatgcatgggccttcgctacca 843 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 844 acttcgtccccggaaagt 861
>emb|AJ843976.1| Plantago major partial mRNA for light harvesting protein 1 (lhc1 gene) Length = 688 Score = 60.0 bits (30), Expect = 4e-06 Identities = 58/66 (87%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 |||||||| |||| ||||||| || |||||||| || |||||||| ||||||||||| || Sbjct: 598 aagggcccgttgg-agaaccttgctgaccacctagcagaccccgttaacaacaacgcttg 656 Query: 72 ggcctt 77 |||||| Sbjct: 657 ggcctt 662
>gb|AY120776.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 1003 Score = 60.0 bits (30), Expect = 4e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| | || || || ||||||||||| || ||||||||||| |||| Sbjct: 784 agaacctcgcggaccacttggctgatccagtcaacaacaatgcatgggccttcgctacca 843 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 844 acttcgtccccggaaagt 861
>gb|AF324693.2|AF324693 Arabidopsis thaliana At2g34430 (At2g34430/T31E10.23) mRNA, complete cds Length = 1009 Score = 60.0 bits (30), Expect = 4e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| | || || || ||||||||||| || ||||||||||| |||| Sbjct: 790 agaacctcgcggaccacttggctgatccagtcaacaacaatgcatgggccttcgctacca 849 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 850 acttcgtccccggaaagt 867
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 22434777 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 22434835 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 22434836 ctgggtctacgccaccaa 22434853
>emb|BX815776.1|CNS0AE4K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 972 Score = 60.0 bits (30), Expect = 4e-06 Identities = 52/58 (89%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 46 gccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| |||||||| |||||||||||||| ||||| |||| Sbjct: 783 gccgatccagtcaacaacaacgcttgggcctt-gccaccaactttgttcccggaaagt 839
>emb|BX819881.1|CNS0AA6O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZH03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 638 Score = 60.0 bits (30), Expect = 4e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| | || || || ||||||||||| || ||||||||||| |||| Sbjct: 442 agaacctcgcggaccacttggctgatccagtcaacaacaatgcatgggccttcgctacca 501 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 502 acttcgtccccggaaagt 519
>gb|AY086307.1| Arabidopsis thaliana clone 23727 mRNA, complete sequence Length = 979 Score = 60.0 bits (30), Expect = 4e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| | || || || ||||||||||| || ||||||||||| |||| Sbjct: 784 agaacctcgcggaccacttggctgatccagtcaacaacaatgcatgggccttcgctacca 843 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 844 acttcgtccccggaaagt 861
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 95844 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 95902 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 95903 ctgggtctacgccaccaa 95920
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 769 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 827 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 828 ctgggtctacgccaccaa 845
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 769 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 827 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 828 ctgggtctacgccaccaa 845
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 769 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 827 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 828 ctgggtctacgccaccaa 845
>emb|X64459.1|ATLHB1B1 A.thaliana Lhb1B1 gene for photosystem II type I chlorophyll a/b binding protein Length = 1301 Score = 60.0 bits (30), Expect = 4e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| | || || || ||||||||||| || ||||||||||| |||| Sbjct: 1022 agaacctcgcggaccacttggctgatccagtcaacaacaatgcatgggccttcgctacca 1081 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 1082 acttcgtccccggaaagt 1099
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 740 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 798 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 799 ctgggtctacgccaccaa 816
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 769 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 827 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 828 ctgggtctacgccaccaa 845
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 764 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 822 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 823 ctgggtctacgccaccaa 840
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 764 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 822 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 823 ctgggtctacgccaccaa 840
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 769 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 827 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 828 ctgggtctacgccaccaa 845
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 765 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 823 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 824 ctgggtctacgccaccaa 841
>gb|BT002103.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein. (At2g34430) mRNA, complete cds Length = 853 Score = 60.0 bits (30), Expect = 4e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||||| |||||| | || || || ||||||||||| || ||||||||||| |||| Sbjct: 722 agaacctcgcggaccacttggctgatccagtcaacaacaatgcatgggccttcgctacca 781 Query: 86 actttgtgcccggcaagt 103 |||| || ||||| |||| Sbjct: 782 acttcgtccccggaaagt 799
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 60.0 bits (30), Expect = 4e-06 Identities = 67/78 (85%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 9 ggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgc 68 ||||||||||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 771 ggcaagggccccttgg-agaacctgctcgaccacctcgccgaccccgtcgccaacaacgc 829 Query: 69 gtgggccttcgccaccaa 86 |||| || ||||||||| Sbjct: 830 ctgggtctacgccaccaa 847
>gb|AF279250.1|AF279250 Vigna radiata LHCII type I chlorophyll a/b-binding protein (CipLhcb1*3) mRNA, complete cds; nuclear gene for chloroplast product Length = 941 Score = 56.0 bits (28), Expect = 6e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 28 aacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaac 87 ||||| || ||||||||||| ||||| ||||||||||| || ||||| | ||||| ||| Sbjct: 773 aaccttgcagaccaccttgctgaccctgtcaacaacaatgcttgggcatatgccacaaac 832 Query: 88 tttgtgcccggcaagt 103 ||||| ||||| |||| Sbjct: 833 tttgtccccggaaagt 848
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 56.0 bits (28), Expect = 6e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||| ||||||| | |||||||||||| ||||||||| ||||| | |||||| | Sbjct: 749 agaacctcttcgaccacgtcgccgaccccgtcgccaacaacgcctgggcatacgccacga 808 Query: 86 actttgtgcccggcaa 101 |||| || |||||||| Sbjct: 809 acttcgtccccggcaa 824
>emb|X52741.1|NTCAB16 Tabacco Cab16 mRNA for major chlorophyll a/b binding protein Length = 1025 Score = 56.0 bits (28), Expect = 6e-05 Identities = 77/92 (83%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || ||||||||||| ||||| || ||||||||||| || Sbjct: 767 aagggtccattgg-agaaccttgctgaccaccttgctgacccggttaacaacaacgcctg 825 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 | | | ||||| |||||||| ||||| |||| Sbjct: 826 gtcttatgccactaactttgttcccggaaagt 857
>gb|AY112240.1| Zea mays CL187_6 mRNA sequence Length = 770 Score = 56.0 bits (28), Expect = 6e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||| ||||||| | |||||||||||| ||||||||| ||||| | |||||| | Sbjct: 397 agaacctcttcgaccacgtcgccgaccccgtcgccaacaacgcctgggcatacgccacga 456 Query: 86 actttgtgcccggcaa 101 |||| || |||||||| Sbjct: 457 acttcgtccccggcaa 472
>gb|AY104614.1| Zea mays PCO084486 mRNA sequence Length = 1214 Score = 56.0 bits (28), Expect = 6e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 36 cgaccaccttgccgaccccgtcaacaacaacg 67 ||||||||| |||||||||||||||||||||| Sbjct: 924 cgaccacctcgccgaccccgtcaacaacaacg 955
>gb|M21398.1|TOBCABB Tobacco chlorophyll a/b-binding protein (Cab-E) gene, complete cds Length = 1815 Score = 56.0 bits (28), Expect = 6e-05 Identities = 77/92 (83%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| || ||||||||||| ||||| || ||||||||||| || Sbjct: 1687 aagggtccattgg-agaaccttgctgaccaccttgctgacccggttaacaacaacgcctg 1745 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 | | | ||||| |||||||| ||||| |||| Sbjct: 1746 gtcttatgccactaactttgttcccggaaagt 1777
>emb|BX841915.1|CNS09Y31 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 907 Score = 54.0 bits (27), Expect = 2e-04 Identities = 52/59 (88%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 46 gccgaccccgtcaacaacaacgcgt-gggccttcgccaccaactttgtgcccggcaagt 103 ||||| || |||||||||||||| | |||||||||| ||||||||||| ||||| |||| Sbjct: 111 gccgatccagtcaacaacaacgcatagggccttcgcaaccaactttgttcccggaaagt 53
>dbj|AB115772.1| Physcomitrella patens subsp. patens PpLhcb2 gene for light-harvesting chlorophyll a/b-binding protein 2, complete cds Length = 3125 Score = 54.0 bits (27), Expect = 2e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 36 cgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcc 95 ||||||| | ||||||||||| ||||||||| ||||||| |||||||||||| || || Sbjct: 2955 cgaccacttggccgaccccgttgccaacaacgcatgggcctacgccaccaacttcgttcc 3014 Query: 96 cgg 98 ||| Sbjct: 3015 cgg 3017
>emb|Z13987.1|STCABPSII S.tuberosum gene for chlorophyll a/b-binding protein PS II type I Length = 2432 Score = 54.0 bits (27), Expect = 2e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 37 gaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgccc 96 ||||||||||| || || || ||||||||||| ||||| || ||||| |||||||| ||| Sbjct: 1636 gaccaccttgctgatccagttaacaacaacgcatgggcttttgccacaaactttgttccc 1695 Query: 97 ggcaagt 103 || |||| Sbjct: 1696 ggaaagt 1702
>gb|AF133340.1|AF133340 Phalaenopsis sp. 'KCbutterfly' putative chlorophyll a/b-binding protein mRNA, complete cds Length = 1118 Score = 54.0 bits (27), Expect = 2e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 34 gccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgt 92 |||||||||||||| ||||| || ||||| ||||| ||||| | |||||||||||||| Sbjct: 816 gccgaccaccttgctgacccggtgaacaataacgcctgggcttatgccaccaactttgt 874
>dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007, complete sequence Length = 92741 Score = 54.0 bits (27), Expect = 2e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||| || ||||||||| | ||||| || |||||||| || ||||||| ||||||| Sbjct: 65638 agaaccttgcagaccacctttctgacccagttaacaacaatgcctgggcctatgccacca 65579 Query: 86 actttgt 92 ||||||| Sbjct: 65578 actttgt 65572
>dbj|AB026686.1| Physcomitrella patens mRNA for chlorophyll a/b-binding protein precursor, complete cds Length = 964 Score = 54.0 bits (27), Expect = 2e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 36 cgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcc 95 ||||||| | ||||||||||| ||||||||| ||||||| |||||||||||| || || Sbjct: 777 cgaccacttggccgaccccgttgccaacaacgcctgggcctacgccaccaacttcgttcc 836 Query: 96 cgg 98 ||| Sbjct: 837 cgg 839
>emb|X02356.1|PECAB91R Petunia gene for chlorophyll a/b binding protein cab 91R Length = 1173 Score = 52.0 bits (26), Expect = 9e-04 Identities = 65/78 (83%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||| || || |||||||||||||| || ||||||||||| ||| | | ||| || | Sbjct: 955 agaaccttgctgatcaccttgccgacccagttaacaacaacgcatggtcttacgcaacta 1014 Query: 86 actttgtgcccggcaagt 103 ||||||| ||||| |||| Sbjct: 1015 actttgtccccggaaagt 1032
>gb|J01253.1|PEACAB15 Pea major chlorophyll a/b-binding thylakoid protein (polypeptide 15) mRNA, clone pAB96 Length = 822 Score = 52.0 bits (26), Expect = 9e-04 Identities = 65/78 (83%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||| ||||| || ||||||||||| || ||||||||||| ||| | | || |||| Sbjct: 609 agaaccttgccgatcatcttgccgacccagtgaacaacaacgcatggtcatatgctacca 668 Query: 86 actttgtgcccggcaagt 103 ||||||| ||||| |||| Sbjct: 669 actttgttcccggaaagt 686
>gb|M95068.1|MZEORFI Zea mays putative light-harvesting chlorophyll A/B binding protein mRNA, partial cds Length = 191 Score = 52.0 bits (26), Expect = 9e-04 Identities = 63/76 (82%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||| ||||||| | ||||||||||| ||||||||| ||||| | |||||| | Sbjct: 31 agaacctcttcgaccacgtssccgaccccgtcgccaacaacgcctgggcatacgccacga 90 Query: 86 actttgtgcccggcaa 101 |||| || |||||||| Sbjct: 91 acttcgtccccggcaa 106
>dbj|AB013728.1| Cryptomeria japonica mRNA for light-harvesting chlorophyll a/b-binding protein of photosystem II, complete cds Length = 935 Score = 52.0 bits (26), Expect = 9e-04 Identities = 59/70 (84%) Strand = Plus / Plus Query: 34 gccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtg 93 |||||||| || || ||||| |||||||||||||| ||||| | ||||| |||||||| Sbjct: 741 gccgaccatctggcagaccctgtcaacaacaacgcctgggcttatgccactaactttgtt 800 Query: 94 cccggcaagt 103 ||||| |||| Sbjct: 801 cccgggaagt 810
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 52.0 bits (26), Expect = 9e-04 Identities = 65/78 (83%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||| ||||||| | ||||||||||| ||||||||| ||| | | |||||||| Sbjct: 745 agaacctcttcgaccacgtcaccgaccccgtcgccaacaacgcctggtcatacgccacca 804 Query: 86 actttgtgcccggcaagt 103 |||| || |||||||||| Sbjct: 805 acttcgtccccggcaagt 822
>gb|AF458406.1|AF458406 Brassica oleracea chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 980 Score = 50.1 bits (25), Expect = 0.004 Identities = 43/49 (87%) Strand = Plus / Plus Query: 55 gtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaagt 103 ||||||||||| || |||||||| ||||||||||| || ||||| |||| Sbjct: 793 gtcaacaacaatgcatgggcctttgccaccaacttcgtccccggaaagt 841
>emb|AJ538931.1|NTA538931 Nicotiana tabacum cDNA-AFLP-fragment BT21-M1-005 Length = 332 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 5 cactggcaagggcccattggnagaacctcgccgaccaccttgccgaccc 53 |||||| ||||| ||||||| ||||||| |||||||||||||| ||||| Sbjct: 280 cactggaaagggtccattgg-agaaccttgccgaccaccttgctgaccc 327
>emb|AJ538874.1|NTA538874 Nicotiana tabacum cDNA-AFLP-fragment BT2-M23-004 Length = 311 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 5 cactggcaagggcccattggnagaacctcgccgaccaccttgccgaccc 53 |||||| ||||| ||||||| ||||||| |||||||||||||| ||||| Sbjct: 259 cactggaaagggtccattgg-agaaccttgccgaccaccttgctgaccc 306
>emb|AJ538840.1|NTA538840 Nicotiana tabacum cDNA-AFLP-fragment BT2-M11-016 Length = 315 Score = 50.1 bits (25), Expect = 0.004 Identities = 44/49 (89%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 5 cactggcaagggcccattggnagaacctcgccgaccaccttgccgaccc 53 |||||| ||||| ||||||| ||||||| |||||||||||||| ||||| Sbjct: 263 cactggaaagggtccattgg-agaaccttgccgaccaccttgctgaccc 310
>gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding protein (CABII) mRNA, partial cds Length = 714 Score = 50.1 bits (25), Expect = 0.004 Identities = 46/53 (86%) Strand = Plus / Plus Query: 49 gaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggcaa 101 ||||||||| ||||||||| ||||| | |||||||||||| || |||||||| Sbjct: 522 gaccccgtcgccaacaacgcctgggcttacgccaccaacttcgtccccggcaa 574
>dbj|AB006081.1| Fagus crenata mRNA for chlorophyll a/b-binding protein, complete cds Length = 1010 Score = 50.1 bits (25), Expect = 0.004 Identities = 61/73 (83%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||| || ||||||||||| ||||| |||| |||||| || ||||| | ||||| | Sbjct: 763 agaaccttgctgaccaccttgctgacccagtcaccaacaatgcttgggcttatgccacaa 822 Query: 86 actttgtgcccgg 98 ||||||| ||||| Sbjct: 823 actttgtccccgg 835
>dbj|AB115771.1| Physcomitrella patens subsp. patens PpLhcb1 gene for light-harvesting chlorophyll a/b-binding protein 1, complete cds Length = 1975 Score = 48.1 bits (24), Expect = 0.014 Identities = 79/96 (82%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 6 actggcaagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaa 65 |||||||||||||| |||| ||||| | ||||||| | || |||||||| |||||| Sbjct: 1754 actggcaagggccccttgg-agaacttgaacgaccacttggcagaccccgttgccaacaa 1812 Query: 66 cgcgtgggccttcgccaccaactttgtgcccggcaa 101 ||| ||||| | |||||||||||| || |||||||| Sbjct: 1813 cgcatgggcatacgccaccaacttcgttcccggcaa 1848
>gb|K00972.1|PETCAB146 Petunia major chlorophyll a/b binding protein (Cab) clone pCab146, 3' end and flank Length = 498 Score = 48.1 bits (24), Expect = 0.014 Identities = 76/92 (82%), Gaps = 1/92 (1%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtg 71 ||||| ||||||| ||||||| |||||||||||||| || || || |||||||| || || Sbjct: 286 aagggtccattgg-agaaccttgccgaccaccttgctgatccagttaacaacaatgcatg 344 Query: 72 ggccttcgccaccaactttgtgcccggcaagt 103 | ||| || || |||||||| ||||| |||| Sbjct: 345 gtcctatgctacaaactttgttcccggaaagt 376
>gb|U01964.1|GMU01964 Glycine max cv. Dare photosystem II type I chlorophyll a/b-binding protein (lhcb1*7) gene, complete cds Length = 1882 Score = 48.1 bits (24), Expect = 0.014 Identities = 54/64 (84%) Strand = Plus / Plus Query: 40 caccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtgcccggc 99 |||||||| ||||| ||||||||||| || ||||| | ||||| |||||||| ||||| Sbjct: 1487 caccttgctgacccagtcaacaacaatgcttgggcttatgccacaaactttgttcccgga 1546 Query: 100 aagt 103 |||| Sbjct: 1547 aagt 1550
>gb|DQ124219.1| Fagus sylvatica putative chlorophyll a/b-binding protein mRNA, partial cds Length = 780 Score = 46.1 bits (23), Expect = 0.055 Identities = 56/67 (83%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||| || ||||||||||| ||||| |||| |||||| || ||||| | ||||| | Sbjct: 707 agaaccttgctgaccaccttgctgacccagtcaccaacaatgcctgggcttatgccacaa 766 Query: 86 actttgt 92 ||||||| Sbjct: 767 actttgt 773
>emb|AJ538488.1|NTA538488 Nicotiana tabacum cDNA-AFLP-fragment BC2-M23-037 Length = 135 Score = 46.1 bits (23), Expect = 0.055 Identities = 29/31 (93%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgt 56 ||||||| |||||||||||||| |||||||| Sbjct: 103 agaaccttgccgaccaccttgctgaccccgt 133
>gb|AF162200.1|AF162200 Lactuca sativa light-harvesting chlorophyll a/b binding protein mRNA, complete sequence; nuclear gene for chloroplast product Length = 643 Score = 44.1 bits (22), Expect = 0.22 Identities = 38/42 (90%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 12 aagggcccattggnagaacctcgccgaccaccttgccgaccc 53 ||||| ||||||| |||||||||| ||||||||||| ||||| Sbjct: 538 aagggaccattgg-agaacctcgctgaccaccttgctgaccc 578
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 0.86 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 cctcgccgaccaccttgccga 50 ||||||||||||||||||||| Sbjct: 459988 cctcgccgaccaccttgccga 459968
>emb|X12980.1|GMCAB2 Soybean Cab2 gene for minor PSII LHCII chlorophyll a/b binding protein Length = 1354 Score = 42.1 bits (21), Expect = 0.86 Identities = 45/53 (84%) Strand = Plus / Plus Query: 34 gccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaa 86 |||||||||||||| || || || |||||||| || ||||||| |||||||| Sbjct: 950 gccgaccaccttgctgatccagtaaacaacaatgcctgggcctatgccaccaa 1002
>gb|M64619.1|PEACAB66 Pea cab gene, complete cds Length = 1666 Score = 42.1 bits (21), Expect = 0.86 Identities = 60/73 (82%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||| || || || ||||| ||||| ||||||||||| || ||| | | ||||||| Sbjct: 1440 agaaccttgctgatcatcttgcagacccagtcaacaacaatgcatggtcatatgccacca 1499 Query: 86 actttgtgcccgg 98 ||||||| ||||| Sbjct: 1500 actttgttcccgg 1512
>gb|K02067.1|PEACAB80 Pea (P.sativum) gene AB80 encoding major light-harvesting chlorophyll a/b-binding protein (polypeptide 15) complex precursor, complete coding sequence Length = 1993 Score = 42.1 bits (21), Expect = 0.86 Identities = 60/73 (82%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 ||||||| || || || ||||| ||||| ||||||||||| || ||| | | ||||||| Sbjct: 1741 agaaccttgctgatcatcttgcagacccagtcaacaacaatgcatggtcatatgccacca 1800 Query: 86 actttgtgcccgg 98 ||||||| ||||| Sbjct: 1801 actttgttcccgg 1813
>gb|DQ460158.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC4M24-157 sequence Length = 112 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccc 53 ||||||| |||||||||||||| ||||| Sbjct: 65 agaaccttgccgaccaccttgctgaccc 92
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 cctcgccgaccaccttgccg 49 |||||||||||||||||||| Sbjct: 288967 cctcgccgaccaccttgccg 288986
>gb|AF220527.1|AF220527 Euphorbia esula chlorophyll a/b binding protein precursor, mRNA, complete cds Length = 927 Score = 40.1 bits (20), Expect = 3.4 Identities = 59/72 (81%) Strand = Plus / Plus Query: 34 gccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccaccaactttgtg 93 |||||||||||| ||||| || |||||||| || ||||| || || |||||||| || Sbjct: 736 gccgaccacctttttgacccggttaacaacaatgcttgggcttttgcgaccaacttcgtc 795 Query: 94 cccggcaagtaa 105 ||||| |||||| Sbjct: 796 cccggaaagtaa 807
>emb|Y13865.1|BVCHLOROP Beta vulgaris mRNA for chlorophyll a/b-binding protein Length = 1036 Score = 40.1 bits (20), Expect = 3.4 Identities = 53/64 (82%) Strand = Plus / Plus Query: 26 agaacctcgccgaccaccttgccgaccccgtcaacaacaacgcgtgggccttcgccacca 85 |||||||| | ||||||||||| ||||| || ||||| || |||||||| ||||||| Sbjct: 794 agaacctctcagaccaccttgctgacccagtggctaacaatgcctgggcctttgccacca 853 Query: 86 actt 89 |||| Sbjct: 854 actt 857
>dbj|AP004410.1| Lamprogrammus niger mitochondrial DNA, complete genome Length = 16564 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 atgatgtaaagtacgagggt 214 |||||||||||||||||||| Sbjct: 7291 atgatgtaaagtacgagggt 7272 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,526,439 Number of Sequences: 3902068 Number of extensions: 1526439 Number of successful extensions: 22472 Number of sequences better than 10.0: 230 Number of HSP's better than 10.0 without gapping: 230 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 22115 Number of HSP's gapped (non-prelim): 351 length of query: 262 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 240 effective length of database: 17,147,199,772 effective search space: 4115327945280 effective search space used: 4115327945280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)