| Clone Name | baal40o17 |
|---|---|
| Clone Library Name | barley_pub |
>WBP2_MOUSE (P97765) WW domain-binding protein 2 (WBP-2)| Length = 261 Score = 40.4 bits (93), Expect = 0.005 Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 1/122 (0%) Frame = +3 Query: 48 EMFVLARDGVEFHVDKIPSAPGGHAKTK-GTIYLSNIRMVFVAAKPIGNFFAFDMPLLYV 224 E +++ D VE + + + P TK GT+YL+ R++F++ K +F MP + Sbjct: 19 ESILMSYDHVELTFNDMKNVPEAFKGTKKGTVYLTPYRVIFLS-KGKDAMQSFMMPFYLM 77 Query: 225 HGEKFNQPIFHCNNISGFVEPVVPESQNRALYSTHTFKILFKEGGCGTFVPLFLNLITSV 404 + QP+F N F++ +V + ++K+ F GG F L + + Sbjct: 78 KDCEIKQPVFGAN----FIKGIVKAEAGGGWEGSASYKLTFTAGGAIEFGQRMLQVASQA 133 Query: 405 RR 410 R Sbjct: 134 SR 135
>WBP2_HUMAN (Q969T9) WW domain-binding protein 2 (WBP-2)| Length = 261 Score = 39.3 bits (90), Expect = 0.010 Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 1/122 (0%) Frame = +3 Query: 48 EMFVLARDGVEFHVDKIPSAPGGHAKTK-GTIYLSNIRMVFVAAKPIGNFFAFDMPLLYV 224 E +++ D VE + + + P TK GT+YL+ R++F++ K +F MP + Sbjct: 19 ESILMSYDHVELTFNDMKNVPEAFKGTKKGTVYLTPYRVIFLS-KGKDAMQSFMMPFYLM 77 Query: 225 HGEKFNQPIFHCNNISGFVEPVVPESQNRALYSTHTFKILFKEGGCGTFVPLFLNLITSV 404 + QP+F N I G V + ++K+ F GG F L + + Sbjct: 78 KDCEIKQPVFGANYIKG----TVKAEAGGGWEGSASYKLTFTAGGAIEFGQRMLQVASQA 133 Query: 405 RR 410 R Sbjct: 134 SR 135
>WBP2_RAT (Q8R478) WW domain-binding protein 2 (WBP-2)| Length = 262 Score = 38.9 bits (89), Expect = 0.014 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 1/122 (0%) Frame = +3 Query: 48 EMFVLARDGVEFHVDKIPSAPGGHAKTK-GTIYLSNIRMVFVAAKPIGNFFAFDMPLLYV 224 E +++ D VE + + + P TK GT+YL+ R++F+ +K +F MP + Sbjct: 19 ESILMSYDHVELTFNDMKNVPEAFKGTKKGTVYLTPYRVIFL-SKGKDAMRSFMMPFYLM 77 Query: 225 HGEKFNQPIFHCNNISGFVEPVVPESQNRALYSTHTFKILFKEGGCGTFVPLFLNLITSV 404 + QP+F N F++ V + ++K+ F GG F L + + Sbjct: 78 KDCEVKQPVFGAN----FIKGTVKAEAGGGWEGSASYKLTFTAGGAIEFGQQMLQVASQA 133 Query: 405 RR 410 R Sbjct: 134 SR 135
>SEC16_SCHPO (O14029) Multidomain vesicle coat protein| Length = 1995 Score = 34.3 bits (77), Expect = 0.33 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%) Frame = +3 Query: 240 NQPIFHCNNISGFVEPVVPESQNRALYSTHTFKILFKEGGCGTFVPLF---LNLITSVRR 410 NQP+ H +N+ V PVV +++ L T + F G CGT V F L T+ + Sbjct: 1061 NQPLLH-SNLHSPVSPVVDSNEDSRLKFLSTQRPAFSFGPCGTIVMAFSTPSGLYTTSGK 1119 Query: 411 HNQFEAQPATVPRV 452 +F A P + ++ Sbjct: 1120 GTKFIAGPIKIEKL 1133
>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor| (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth factor-like domains 2) (Epidermal growth factor-like 1) Length = 3312 Score = 30.8 bits (68), Expect = 3.7 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Frame = +2 Query: 287 GCSRKPEQGFVLHPHLQDLVQGRWMWHLC----ATLPEPDHVSAAPQSV*SPACYRAPCG 454 G + + QG V +QG W+ A LP V+A P V + AC PC Sbjct: 1903 GSAEEAPQGLV------GCIQGVWLGSTPSGSPALLPPSHRVNAEPGCVVTNACASGPCP 1956 Query: 455 PHA 463 PHA Sbjct: 1957 PHA 1959
>ZSWM4_MOUSE (Q8C7B8) Zinc finger SWIM domain-containing protein 4| Length = 1101 Score = 29.6 bits (65), Expect = 8.2 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 6/51 (11%) Frame = -1 Query: 412 WRRTDVIRFRKSGTKVPHPPSLNKILKVW------VEYKALFWLSGTTGST 278 WRR +++R+ S PP+L I+K W VE + ++GTT +T Sbjct: 799 WRRREMVRWLVSCATEIGPPALMSIMKNWYSLFTPVEAVTIVAVTGTTHAT 849
>ATF7_MOUSE (Q8R0S1) Cyclic AMP-dependent transcription factor ATF-7| (Activating transcription factor 7) (Transcription factor ATF-A) Length = 413 Score = 29.6 bits (65), Expect = 8.2 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Frame = +3 Query: 246 PIFHCNNISGFVEPVVPESQNRALYSTHTFKILFKEGGCGTFVPLFLNLITSVRRHNQF- 422 P+ + +IS P+ E++ R L +T T ++ GGCG V ++T+ NQ Sbjct: 238 PVNNSGSISPSGHPMPSEAKMR-LKATLTHQVSSINGGCGMVVGTASTMVTARPEQNQIL 296 Query: 423 ----EAQPATVPRVDPMQ 464 +A P+V P Q Sbjct: 297 IQHPDAPSPAQPQVSPAQ 314
>DNE21_RHIME (Q92LA6) Error-prone DNA polymerase 1 (EC 2.7.7.7)| Length = 1116 Score = 29.6 bits (65), Expect = 8.2 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 6/59 (10%) Frame = -3 Query: 161 HPYVRKVYGALCFCVTAG----RRGDLVDVELDAVAGEDEHLAV--EGHGHPVPEQLRV 3 +P R+ +G LC ++AG ++GD D + ++E L + +G G P PE L V Sbjct: 83 YPKNRRGWGHLCRLLSAGNLRSKKGDCTLHLADLLEWQEELLLIVMQGEGRPEPESLEV 141 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,296,709 Number of Sequences: 219361 Number of extensions: 2466011 Number of successful extensions: 6833 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 6571 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6827 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)