ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal40o16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_475495.1| Oryza sativa (japonica cultivar-group), predic... 260 3e-66
2gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome... 260 3e-66
3gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome... 260 3e-66
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 260 3e-66
5dbj|AK065975.1| Oryza sativa (japonica cultivar-group) cDNA clon... 260 3e-66
6gb|AY104790.1| Zea mays PCO093811 mRNA sequence 76 1e-10
7gb|BT016764.1| Zea mays clone Contig597 mRNA sequence 56 1e-04
8gb|AY108468.1| Zea mays PCO093809 mRNA sequence 56 1e-04
9gb|AC131098.3| Homo sapiens BAC clone RP11-1226D22 from 4, compl... 46 0.092
10gb|AC008139.9| Drosophila melanogaster clone BACR28B01, complete... 44 0.36
11gb|DQ141342.1| HIV-1 isolate LMP0502 from Spain envelope glycopr... 44 0.36
12ref|NM_206470.1| Drosophila melanogaster CG11870-RC, transcript ... 44 0.36
13ref|NM_169337.2| Drosophila melanogaster CG11870-RB, transcript ... 44 0.36
14ref|NM_141734.2| Drosophila melanogaster CG11870-RA, transcript ... 44 0.36
15gb|AC008357.8| Drosophila melanogaster, chromosome 3R, region 86... 44 0.36
16gb|AE003686.4| Drosophila melanogaster chromosome 3R, section 24... 44 0.36
17gb|DQ087591.1| Thunnus thynnus haplotype Tt119 control region, p... 42 1.4
18gb|AY699929.1| Thunnus thynnus thynnus haplotype 42 control regi... 42 1.4
19gb|AF390433.1|AF390433 Thunnus thynnus haplotype 79 mitochondria... 42 1.4
20gb|AY650684.1| Thunnus thynnus voucher USC tthy140 control regio... 42 1.4
21gb|AY650642.1| Thunnus thynnus voucher UdG tt993 control region,... 42 1.4
22gb|AY650629.1| Thunnus thynnus voucher UdG tt923 control region,... 42 1.4
23gb|AY650597.1| Thunnus thynnus voucher UdG tt773 control region,... 42 1.4
24dbj|AB106301.1| Thunnus thynnus thynnus mitochondrial genes for ... 42 1.4
25dbj|AB106285.1| Thunnus thynnus thynnus mitochondrial genes for ... 42 1.4
26gb|AC138388.3| Mus musculus BAC clone RP23-455J6 from 10, comple... 42 1.4
27emb|Y13759.1|ENY13759 Emericella nidulans abfB gene 42 1.4
28ref|XM_471977.1| Oryza sativa (japonica cultivar-group), predic... 40 5.6
29ref|XM_359989.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 5.6
30gb|AC005091.1| Homo sapiens BAC clone CTA-318C11 from 7, complet... 40 5.6
31gb|AC116392.12| Mus musculus chromosome 10, clone RP23-93D3, com... 40 5.6
32emb|AL137787.11| Human DNA sequence from clone RP5-1070B1 on chr... 40 5.6
33gb|AC091201.4| Drosophila melanogaster 3L BAC RP98-47H5 (Roswell... 40 5.6
34gb|AC080145.8| Homo sapiens chromosome 15, clone CTD-2298D17, co... 40 5.6
35dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
36emb|AL954673.5| Zebrafish DNA sequence from clone BUSM1-122B7 in... 40 5.6
37gb|AE003566.3| Drosophila melanogaster chromosome 3L, section 19... 40 5.6
38emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4,... 40 5.6
39emb|AL604025.15| Mouse DNA sequence from clone RP23-455K6 on chr... 40 5.6 
>ref|XM_475495.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 945

 Score =  260 bits (131), Expect = 3e-66
 Identities = 242/279 (86%)
 Strand = Plus / Plus

                                                                       
Query: 2   aaggctgagaggatgaatgactttgagtatgcaaggatgaacactgtccctgatgtgaag 61
           ||||| ||||||| ||||||  |||| |||||  ||||||||||  |||||||||| |||
Sbjct: 109 aaggcggagaggacgaatgagcttgactatgcgcggatgaacaccatccctgatgtcaag 168

                                                                       
Query: 62  caatgggataagctatcctaccaccaagaagacaacaagatggaccacctcaatcttggc 121
           |||||||||||| |||||||||||||||| || | |||||||||||||||||||||||||
Sbjct: 169 caatgggataaggtatcctaccaccaagatgagagcaagatggaccacctcaatcttggc 228

                                                                       
Query: 122 ctcatgaacctggatcttaagatgaatgatctcaagatgaatgaggctgccatgaagtac 181
           || ||||| || |||||||||||||| ||  ||| ||||||||| || || |||||| | 
Sbjct: 229 cttatgaatctagatcttaagatgaacgacatcaggatgaatgacgcagctatgaagaat 288

                                                                       
Query: 182 cctttccgcaacatggcctataacatgaatccgatgtaccccaagggaaacaatggtaat 241
           |||||||||  ||||||||| |||||||||| | ||||||||||||||  |||||| |||
Sbjct: 289 cctttccgcggcatggcctacaacatgaatcagctgtaccccaagggaggcaatggcaat 348

                                                  
Query: 242 gtcaattcattcaagatgaatgttggggtcaacaaatat 280
           || || || ||||||||||||||||||||||||||||||
Sbjct: 349 gttaactcgttcaagatgaatgttggggtcaacaaatat 387



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                     
Query: 360 ctgttgacaagcgcttcaaaacattgccaacaagcgagatgctaccgaggaatgaagt 417
           |||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 482 ctgttgacaaacgattcaaaacattgccaacaagtgagatgctaccaaggaatgaagt 539
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>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02,
             complete sequence
          Length = 99795

 Score =  260 bits (131), Expect = 3e-66
 Identities = 242/279 (86%)
 Strand = Plus / Minus

                                                                         
Query: 2     aaggctgagaggatgaatgactttgagtatgcaaggatgaacactgtccctgatgtgaag 61
             ||||| ||||||| ||||||  |||| |||||  ||||||||||  |||||||||| |||
Sbjct: 12154 aaggcggagaggacgaatgagcttgactatgcgcggatgaacaccatccctgatgtcaag 12095

                                                                         
Query: 62    caatgggataagctatcctaccaccaagaagacaacaagatggaccacctcaatcttggc 121
             |||||||||||| |||||||||||||||| || | |||||||||||||||||||||||||
Sbjct: 12094 caatgggataaggtatcctaccaccaagatgagagcaagatggaccacctcaatcttggc 12035

                                                                         
Query: 122   ctcatgaacctggatcttaagatgaatgatctcaagatgaatgaggctgccatgaagtac 181
             || ||||| || |||||||||||||| ||  ||| ||||||||| || || |||||| | 
Sbjct: 12034 cttatgaatctagatcttaagatgaacgacatcaggatgaatgacgcagctatgaagaat 11975

                                                                         
Query: 182   cctttccgcaacatggcctataacatgaatccgatgtaccccaagggaaacaatggtaat 241
             |||||||||  ||||||||| |||||||||| | ||||||||||||||  |||||| |||
Sbjct: 11974 cctttccgcggcatggcctacaacatgaatcagctgtaccccaagggaggcaatggcaat 11915

                                                    
Query: 242   gtcaattcattcaagatgaatgttggggtcaacaaatat 280
             || || || ||||||||||||||||||||||||||||||
Sbjct: 11914 gttaactcgttcaagatgaatgttggggtcaacaaatat 11876



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                       
Query: 360   ctgttgacaagcgcttcaaaacattgccaacaagcgagatgctaccgaggaatgaagt 417
             |||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 11781 ctgttgacaaacgattcaaaacattgccaacaagtgagatgctaccaaggaatgaagt 11724
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>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04,
             complete sequence
          Length = 122599

 Score =  260 bits (131), Expect = 3e-66
 Identities = 242/279 (86%)
 Strand = Plus / Minus

                                                                         
Query: 2     aaggctgagaggatgaatgactttgagtatgcaaggatgaacactgtccctgatgtgaag 61
             ||||| ||||||| ||||||  |||| |||||  ||||||||||  |||||||||| |||
Sbjct: 95271 aaggcggagaggacgaatgagcttgactatgcgcggatgaacaccatccctgatgtcaag 95212

                                                                         
Query: 62    caatgggataagctatcctaccaccaagaagacaacaagatggaccacctcaatcttggc 121
             |||||||||||| |||||||||||||||| || | |||||||||||||||||||||||||
Sbjct: 95211 caatgggataaggtatcctaccaccaagatgagagcaagatggaccacctcaatcttggc 95152

                                                                         
Query: 122   ctcatgaacctggatcttaagatgaatgatctcaagatgaatgaggctgccatgaagtac 181
             || ||||| || |||||||||||||| ||  ||| ||||||||| || || |||||| | 
Sbjct: 95151 cttatgaatctagatcttaagatgaacgacatcaggatgaatgacgcagctatgaagaat 95092

                                                                         
Query: 182   cctttccgcaacatggcctataacatgaatccgatgtaccccaagggaaacaatggtaat 241
             |||||||||  ||||||||| |||||||||| | ||||||||||||||  |||||| |||
Sbjct: 95091 cctttccgcggcatggcctacaacatgaatcagctgtaccccaagggaggcaatggcaat 95032

                                                    
Query: 242   gtcaattcattcaagatgaatgttggggtcaacaaatat 280
             || || || ||||||||||||||||||||||||||||||
Sbjct: 95031 gttaactcgttcaagatgaatgttggggtcaacaaatat 94993



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                       
Query: 360   ctgttgacaagcgcttcaaaacattgccaacaagcgagatgctaccgaggaatgaagt 417
             |||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 94898 ctgttgacaaacgattcaaaacattgccaacaagtgagatgctaccaaggaatgaagt 94841
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  260 bits (131), Expect = 3e-66
 Identities = 242/279 (86%)
 Strand = Plus / Minus

                                                                            
Query: 2        aaggctgagaggatgaatgactttgagtatgcaaggatgaacactgtccctgatgtgaag 61
                ||||| ||||||| ||||||  |||| |||||  ||||||||||  |||||||||| |||
Sbjct: 24409481 aaggcggagaggacgaatgagcttgactatgcgcggatgaacaccatccctgatgtcaag 24409422

                                                                            
Query: 62       caatgggataagctatcctaccaccaagaagacaacaagatggaccacctcaatcttggc 121
                |||||||||||| |||||||||||||||| || | |||||||||||||||||||||||||
Sbjct: 24409421 caatgggataaggtatcctaccaccaagatgagagcaagatggaccacctcaatcttggc 24409362

                                                                            
Query: 122      ctcatgaacctggatcttaagatgaatgatctcaagatgaatgaggctgccatgaagtac 181
                || ||||| || |||||||||||||| ||  ||| ||||||||| || || |||||| | 
Sbjct: 24409361 cttatgaatctagatcttaagatgaacgacatcaggatgaatgacgcagctatgaagaat 24409302

                                                                            
Query: 182      cctttccgcaacatggcctataacatgaatccgatgtaccccaagggaaacaatggtaat 241
                |||||||||  ||||||||| |||||||||| | ||||||||||||||  |||||| |||
Sbjct: 24409301 cctttccgcggcatggcctacaacatgaatcagctgtaccccaagggaggcaatggcaat 24409242

                                                       
Query: 242      gtcaattcattcaagatgaatgttggggtcaacaaatat 280
                || || || ||||||||||||||||||||||||||||||
Sbjct: 24409241 gttaactcgttcaagatgaatgttggggtcaacaaatat 24409203



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 54/58 (93%)
 Strand = Plus / Minus

                                                                          
Query: 360      ctgttgacaagcgcttcaaaacattgccaacaagcgagatgctaccgaggaatgaagt 417
                |||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 24409108 ctgttgacaaacgattcaaaacattgccaacaagtgagatgctaccaaggaatgaagt 24409051
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>dbj|AK065975.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045D18, full
           insert sequence
          Length = 1546

 Score =  260 bits (131), Expect = 3e-66
 Identities = 242/279 (86%)
 Strand = Plus / Plus

                                                                       
Query: 2   aaggctgagaggatgaatgactttgagtatgcaaggatgaacactgtccctgatgtgaag 61
           ||||| ||||||| ||||||  |||| |||||  ||||||||||  |||||||||| |||
Sbjct: 353 aaggcggagaggacgaatgagcttgactatgcgcggatgaacaccatccctgatgtcaag 412

                                                                       
Query: 62  caatgggataagctatcctaccaccaagaagacaacaagatggaccacctcaatcttggc 121
           |||||||||||| |||||||||||||||| || | |||||||||||||||||||||||||
Sbjct: 413 caatgggataaggtatcctaccaccaagatgagagcaagatggaccacctcaatcttggc 472

                                                                       
Query: 122 ctcatgaacctggatcttaagatgaatgatctcaagatgaatgaggctgccatgaagtac 181
           || ||||| || |||||||||||||| ||  ||| ||||||||| || || |||||| | 
Sbjct: 473 cttatgaatctagatcttaagatgaacgacatcaggatgaatgacgcagctatgaagaat 532

                                                                       
Query: 182 cctttccgcaacatggcctataacatgaatccgatgtaccccaagggaaacaatggtaat 241
           |||||||||  ||||||||| |||||||||| | ||||||||||||||  |||||| |||
Sbjct: 533 cctttccgcggcatggcctacaacatgaatcagctgtaccccaagggaggcaatggcaat 592

                                                  
Query: 242 gtcaattcattcaagatgaatgttggggtcaacaaatat 280
           || || || ||||||||||||||||||||||||||||||
Sbjct: 593 gttaactcgttcaagatgaatgttggggtcaacaaatat 631



 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                     
Query: 360 ctgttgacaagcgcttcaaaacattgccaacaagcgagatgctaccgaggaatgaagt 417
           |||||||||| || |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 726 ctgttgacaaacgattcaaaacattgccaacaagtgagatgctaccaaggaatgaagt 783
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>gb|AY104790.1| Zea mays PCO093811 mRNA sequence
          Length = 1604

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                 
Query: 364 tgacaagcgcttcaaaacattgccaacaagcgagatgctaccgaggaatgaagt 417
           ||||||||||||||| |||||||| || || |||||||||||||||||||||||
Sbjct: 624 tgacaagcgcttcaagacattgccgacgagtgagatgctaccgaggaatgaagt 677



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 239 aatgtcaattcattcaagatgaatgttggggtcaacaa 276
           ||||||||| | ||||||||||||||||| ||||||||
Sbjct: 487 aatgtcaatgcgttcaagatgaatgttggagtcaacaa 524



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 119 ggcctcatgaacctggatcttaagatgaa 147
           |||||||||||||||||||| ||||||||
Sbjct: 373 ggcctcatgaacctggatctcaagatgaa 401
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>gb|BT016764.1| Zea mays clone Contig597 mRNA sequence
          Length = 1573

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 362 gttgacaagcgcttcaaaacattgccaacaagcgagatgctaccgaggaatgaagt 417
           ||||||||||||||||| || ||||| || ||||||||||| |||| ||| |||||
Sbjct: 628 gttgacaagcgcttcaagacgttgccgacgagcgagatgctgccgaagaacgaagt 683



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 140 aagatgaatgatctcaagatgaatgaggc 168
           |||||||| |||||||||||||| |||||
Sbjct: 361 aagatgaacgatctcaagatgaacgaggc 389
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>gb|AY108468.1| Zea mays PCO093809 mRNA sequence
          Length = 1259

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 362 gttgacaagcgcttcaaaacattgccaacaagcgagatgctaccgaggaatgaagt 417
           ||||||||||||||||| || ||||| || ||||||||||| |||| ||| |||||
Sbjct: 258 gttgacaagcgcttcaagacgttgccgacgagcgagatgctgccgaagaacgaagt 313
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>gb|AC131098.3| Homo sapiens BAC clone RP11-1226D22 from 4, complete sequence
          Length = 71827

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 229   aaacaatggtaatgtcaattcattcaa 255
             |||||||||||| ||||||||||||||
Sbjct: 10747 aaacaatggtaaagtcaattcattcaa 10773
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>gb|AC008139.9| Drosophila melanogaster clone BACR28B01, complete sequence
          Length = 170675

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 331    caacaacaatggaggcaacagcaaca 356
              ||||||| ||||||||||||||||||
Sbjct: 166933 caacaactatggaggcaacagcaaca 166958
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>gb|DQ141342.1| HIV-1 isolate LMP0502 from Spain envelope glycoprotein (env) gene,
            complete cds
          Length = 2580

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 321  atggtggtaacaacaacaatgg 342
            ||||||||||||||||||||||
Sbjct: 1364 atggtggtaacaacaacaatgg 1385
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>ref|NM_206470.1| Drosophila melanogaster CG11870-RC, transcript variant C (CG11870),
            mRNA
          Length = 4793

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 331  caacaacaatggaggcaacagcaaca 356
            ||||||| ||||||||||||||||||
Sbjct: 3296 caacaactatggaggcaacagcaaca 3321
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>ref|NM_169337.2| Drosophila melanogaster CG11870-RB, transcript variant B (CG11870),
            mRNA
          Length = 5076

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 331  caacaacaatggaggcaacagcaaca 356
            ||||||| ||||||||||||||||||
Sbjct: 3579 caacaactatggaggcaacagcaaca 3604
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>ref|NM_141734.2| Drosophila melanogaster CG11870-RA, transcript variant A (CG11870),
            mRNA
          Length = 4588

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 331  caacaacaatggaggcaacagcaaca 356
            ||||||| ||||||||||||||||||
Sbjct: 3091 caacaactatggaggcaacagcaaca 3116
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>gb|AC008357.8| Drosophila melanogaster, chromosome 3R, region 86A-86A, BAC clone
             BACR03L12, complete sequence
          Length = 190672

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 331   caacaacaatggaggcaacagcaaca 356
             ||||||| ||||||||||||||||||
Sbjct: 30133 caacaactatggaggcaacagcaaca 30158
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>gb|AE003686.4| Drosophila melanogaster chromosome 3R, section 24 of 118 of the complete
              sequence
          Length = 223505

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 331    caacaacaatggaggcaacagcaaca 356
              ||||||| ||||||||||||||||||
Sbjct: 134469 caacaactatggaggcaacagcaaca 134494
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>gb|DQ087591.1| Thunnus thynnus haplotype Tt119 control region, partial sequence;
           mitochondrial
          Length = 785

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 250 attcaagatgaatgttggggt 270
           |||||||||||||||||||||
Sbjct: 200 attcaagatgaatgttggggt 180
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>gb|AY699929.1| Thunnus thynnus thynnus haplotype 42 control region, complete
           sequence; mitochondrial
          Length = 865

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 250 attcaagatgaatgttggggt 270
           |||||||||||||||||||||
Sbjct: 200 attcaagatgaatgttggggt 180
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>gb|AF390433.1|AF390433 Thunnus thynnus haplotype 79 mitochondrial control region, complete
           sequence
          Length = 861

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 250 attcaagatgaatgttggggt 270
           |||||||||||||||||||||
Sbjct: 196 attcaagatgaatgttggggt 176
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>gb|AY650684.1| Thunnus thynnus voucher USC tthy140 control region, partial
           sequence; mitochondrial
          Length = 332

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 250 attcaagatgaatgttggggt 270
           |||||||||||||||||||||
Sbjct: 169 attcaagatgaatgttggggt 149
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>gb|AY650642.1| Thunnus thynnus voucher UdG tt993 control region, partial sequence;
           mitochondrial
          Length = 368

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 250 attcaagatgaatgttggggt 270
           |||||||||||||||||||||
Sbjct: 196 attcaagatgaatgttggggt 176
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>gb|AY650629.1| Thunnus thynnus voucher UdG tt923 control region, partial sequence;
           mitochondrial
          Length = 368

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 250 attcaagatgaatgttggggt 270
           |||||||||||||||||||||
Sbjct: 196 attcaagatgaatgttggggt 176
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>gb|AY650597.1| Thunnus thynnus voucher UdG tt773 control region, partial sequence;
           mitochondrial
          Length = 368

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 250 attcaagatgaatgttggggt 270
           |||||||||||||||||||||
Sbjct: 196 attcaagatgaatgttggggt 176
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>dbj|AB106301.1| Thunnus thynnus thynnus mitochondrial genes for tRNA-Thr, tRNA-Pro,
           D-loop, tRNA-Phe, 12S rRNA, partial and complete
           sequence, haplotype:Tth Hp23
          Length = 1258

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 250 attcaagatgaatgttggggt 270
           |||||||||||||||||||||
Sbjct: 307 attcaagatgaatgttggggt 287
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>dbj|AB106285.1| Thunnus thynnus thynnus mitochondrial genes for tRNA-Thr, tRNA-Pro,
           D-loop, tRNA-Phe, 12S rRNA, partial and complete
           sequence, haplotype:Tth Hp3
          Length = 1258

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 250 attcaagatgaatgttggggt 270
           |||||||||||||||||||||
Sbjct: 307 attcaagatgaatgttggggt 287
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>gb|AC138388.3| Mus musculus BAC clone RP23-455J6 from 10, complete sequence
          Length = 164600

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 36    ggatgaacactgtccctgatg 56
             |||||||||||||||||||||
Sbjct: 80055 ggatgaacactgtccctgatg 80075
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>emb|Y13759.1|ENY13759 Emericella nidulans abfB gene
          Length = 3141

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 30  atgcaaggatgaacactgtcc 50
           |||||||||||||||||||||
Sbjct: 379 atgcaaggatgaacactgtcc 399
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>ref|XM_471977.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3789

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 322 tggtggtaacaacaacaatggagg 345
           |||||| |||||||||||||||||
Sbjct: 696 tggtggcaacaacaacaatggagg 673
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>ref|XM_359989.1| Magnaporthe grisea 70-15 hypothetical protein (MG05364.4) partial
           mRNA
          Length = 972

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 323 ggtggtaacaacaacaatggaggcaacagcaacaac 358
           |||||||||||||||| ||| || |||| |||||||
Sbjct: 787 ggtggtaacaacaacactggcggtaacaacaacaac 822
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>gb|AC005091.1| Homo sapiens BAC clone CTA-318C11 from 7, complete sequence
          Length = 110535

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   atgaatgaggctgccatgaa 177
             ||||||||||||||||||||
Sbjct: 64327 atgaatgaggctgccatgaa 64308
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>gb|AC116392.12| Mus musculus chromosome 10, clone RP23-93D3, complete sequence
          Length = 275200

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    aacaaatatcccaataatca 291
              ||||||||||||||||||||
Sbjct: 114751 aacaaatatcccaataatca 114770
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>emb|AL137787.11| Human DNA sequence from clone RP5-1070B1 on chromosome Xq22.1-23
             Contains the 3' end of a novel gene, a novel gene
             (KIAA1817) and the 5' end of the PRPS1  for phosphoribosyl
             pyrophosphate synthetase 1 (PRSI) gene, complete sequence
          Length = 89446

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   gaggctgccatgaagtaccc 183
             ||||||||||||||||||||
Sbjct: 13976 gaggctgccatgaagtaccc 13995
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>gb|AC091201.4| Drosophila melanogaster 3L BAC RP98-47H5 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 187000

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 329    aacaacaacaatggaggcaacagc 352
              ||||||||||||||| ||||||||
Sbjct: 129580 aacaacaacaatggaagcaacagc 129603
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>gb|AC080145.8| Homo sapiens chromosome 15, clone CTD-2298D17, complete sequence
          Length = 115632

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    atgtgaagcaatgggataag 73
             ||||||||||||||||||||
Sbjct: 57760 atgtgaagcaatgggataag 57741
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 322      tggtggtaacaacaacaatggagg 345
                |||||| |||||||||||||||||
Sbjct: 16225373 tggtggcaacaacaacaatggagg 16225396
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>emb|AL954673.5| Zebrafish DNA sequence from clone BUSM1-122B7 in linkage group 20,
             complete sequence
          Length = 84303

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    accaagaagacaacaagatg 103
             ||||||||||||||||||||
Sbjct: 33217 accaagaagacaacaagatg 33198
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>gb|AE003566.3| Drosophila melanogaster chromosome 3L, section 19 of 83 of the complete
              sequence
          Length = 251457

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 329    aacaacaacaatggaggcaacagc 352
              ||||||||||||||| ||||||||
Sbjct: 170070 aacaacaacaatggaagcaacagc 170093
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>emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062B06,
             complete sequence
          Length = 187154

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 322   tggtggtaacaacaacaatggagg 345
             |||||| |||||||||||||||||
Sbjct: 70288 tggtggcaacaacaacaatggagg 70311
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>emb|AL604025.15| Mouse DNA sequence from clone RP23-455K6 on chromosome 11, complete
             sequence
          Length = 151207

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 238   taatgtcaattcattcaagatgaa 261
             |||||||| |||||||||||||||
Sbjct: 10943 taatgtcacttcattcaagatgaa 10966


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,845,687
Number of Sequences: 3902068
Number of extensions: 4845687
Number of successful extensions: 83767
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83652
Number of HSP's gapped (non-prelim): 114
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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