ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal40o08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT024079.1| Zea mays clone EL01N0525A10 mRNA sequence Length = 2294 Score = 216 bits (109), Expect = 5e-53 Identities = 192/220 (87%) Strand = Plus / Plus Query: 279 gctcttggaggtactcacggcgtgcccaaggtgcattataaaggccggcagggtgactac 338 ||||||||||| || ||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 402 gctcttggaggcacacacggcgtgcccaaggtgcattataaaggtcgtcagggtgactac 461 Query: 339 tatgtcatgattatggatatgctggggcctagcttgtgggattcctggaatttagcaggg 398 |||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||| Sbjct: 462 tatgtcatgattatggatatgctggggcctagtttgtgggattcatggaattcattaggc 521 Query: 399 cagactatgtcatcagaaatggtagcttgtattgctgcagaggccatctntatcctggaa 458 || | ||| |||| |||||||| ||||| ||||| ||| |||| | ||| ||||| Sbjct: 522 caatccatgccatcggaaatggtggcttgcattgccatggagtccatttccatcttggaa 581 Query: 459 agcatgcattctaaaggatatgtacatggagatgtcaaac 498 ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 582 agcatgcattctaaaggatatgtgcatggagacgtcaaac 621 Score = 129 bits (65), Expect = 9e-27 Identities = 128/149 (85%) Strand = Plus / Plus Query: 3 agcggcggggtcagcgccaacaacgccgccgccggcaacgacgacgaggagggcaacacc 62 |||||||| |||||||| |||||||||| |||| ||||||||||| || |||||| Sbjct: 117 agcggcggaatcagcgccgacaacgccgcggccgctaacgacgacgacgacaccaacacg 176 Query: 63 gcccctttccccgacacggtccagataggagggtctcccgagtacagggtcgagaggaag 122 || ||||||||||||||||||||| | ||||| ||||||||||||| ||||||||||||| Sbjct: 177 gcgcctttccccgacacggtccaggtcggaggatctcccgagtacaaggtcgagaggaag 236 Query: 123 ctcggcaaaggcgggtttggccacgtctt 151 || |||||||| || || ||||| ||||| Sbjct: 237 cttggcaaaggtggcttcggccatgtctt 265
>gb|AY105752.1| Zea mays PCO066784 mRNA sequence Length = 2154 Score = 216 bits (109), Expect = 5e-53 Identities = 192/220 (87%) Strand = Plus / Plus Query: 279 gctcttggaggtactcacggcgtgcccaaggtgcattataaaggccggcagggtgactac 338 ||||||||||| || ||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 307 gctcttggaggcacacacggcgtgcccaaggtgcattataaaggtcgtcagggtgactac 366 Query: 339 tatgtcatgattatggatatgctggggcctagcttgtgggattcctggaatttagcaggg 398 |||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||| Sbjct: 367 tatgtcatgattatggatatgctggggcctagtttgtgggattcatggaattcattaggc 426 Query: 399 cagactatgtcatcagaaatggtagcttgtattgctgcagaggccatctntatcctggaa 458 || | ||| |||| |||||||| ||||| ||||| ||| |||| | ||| ||||| Sbjct: 427 caatccatgccatcggaaatggtggcttgcattgccatggagtccatttccatcttggaa 486 Query: 459 agcatgcattctaaaggatatgtacatggagatgtcaaac 498 ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 487 agcatgcattctaaaggatatgtgcatggagacgtcaaac 526 Score = 129 bits (65), Expect = 9e-27 Identities = 128/149 (85%) Strand = Plus / Plus Query: 3 agcggcggggtcagcgccaacaacgccgccgccggcaacgacgacgaggagggcaacacc 62 |||||||| |||||||| |||||||||| |||| ||||||||||| || |||||| Sbjct: 20 agcggcggaatcagcgccgacaacgccgcggccgctaacgacgacgacgacaccaacacg 79 Query: 63 gcccctttccccgacacggtccagataggagggtctcccgagtacagggtcgagaggaag 122 || ||||||||||||||||||||| | ||||| ||||||||||||| ||||||||||||| Sbjct: 80 gcgcctttccccgacacggtccaggtcggaggatctcccgagtacaaggtcgagaggaag 139 Query: 123 ctcggcaaaggcgggtttggccacgtctt 151 || |||||||| || || ||||| ||||| Sbjct: 140 cttggcaaaggtggcttcggccatgtctt 168
>ref|NM_112214.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT3G13670 mRNA, complete cds Length = 2779 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 318 aaaggccggcagggtgactactatgtcatgattatggatatgctggggcctagcttgtgg 377 |||||| |||| || ||||| ||||||||| ||||||| ||||| ||||||||||| ||| Sbjct: 840 aaaggcaggcaaggagactattatgtcatggttatggacatgcttgggcctagcttatgg 899 Query: 378 gattcctggaatttagcagggcagactatgtcatcagaaatggtagcttgtattgc 433 |||| |||||| ||||||| | ||||| || |||||||||||||| ||||| Sbjct: 900 gatttatggaatacttcagggcaagcaatgtcctcggaaatggtagcttgcattgc 955
>gb|AY117204.1| Arabidopsis thaliana putative casein kinase (At3g13670) mRNA, complete cds Length = 2143 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 318 aaaggccggcagggtgactactatgtcatgattatggatatgctggggcctagcttgtgg 377 |||||| |||| || ||||| ||||||||| ||||||| ||||| ||||||||||| ||| Sbjct: 628 aaaggcaggcaaggagactattatgtcatggttatggacatgcttgggcctagcttatgg 687 Query: 378 gattcctggaatttagcagggcagactatgtcatcagaaatggtagcttgtattgc 433 |||| |||||| ||||||| | ||||| || |||||||||||||| ||||| Sbjct: 688 gatttatggaatacttcagggcaagcaatgtcctcggaaatggtagcttgcattgc 743
>gb|AY080703.1| Arabidopsis thaliana putative casein kinase (At3g13670) mRNA, complete cds Length = 2653 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Plus Query: 318 aaaggccggcagggtgactactatgtcatgattatggatatgctggggcctagcttgtgg 377 |||||| |||| || ||||| ||||||||| ||||||| ||||| ||||||||||| ||| Sbjct: 840 aaaggcaggcaaggagactattatgtcatggttatggacatgcttgggcctagcttatgg 899 Query: 378 gattcctggaatttagcagggcagactatgtcatcagaaatggtagcttgtattgc 433 |||| |||||| ||||||| | ||||| || |||||||||||||| ||||| Sbjct: 900 gatttatggaatacttcagggcaagcaatgtcctcggaaatggtagcttgcattgc 955
>dbj|AK100357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083K12, full insert sequence Length = 2696 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 312 cattataaaggccggcagggtgactactatgtcatgattatggatatgctggggcctagc 371 ||||||||||| ||||||| || |||||| ||||||||||||| ||| |||| || ||| Sbjct: 602 cattataaagggaggcagggggattactatatcatgattatggacatgttgggtccaagc 661 Query: 372 ttgtgggat 380 |||||||| Sbjct: 662 ctgtgggat 670
>dbj|AK072116.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126I12, full insert sequence Length = 2431 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 312 cattataaaggccggcagggtgactactatgtcatgattatggatatgctggggcctagc 371 ||||||||||| ||||||| || |||||| ||||||||||||| ||| |||| || ||| Sbjct: 599 cattataaagggaggcagggggattactatatcatgattatggacatgttgggtccaagc 658 Query: 372 ttgtgggat 380 |||||||| Sbjct: 659 ctgtgggat 667
>gb|AF443205.1|AF443205 Chlamydomonas reinhardtii serine/threonine protein kinase (Mut9) mRNA, complete cds Length = 2100 Score = 50.1 bits (25), Expect = 0.007 Identities = 64/77 (83%) Strand = Plus / Plus Query: 303 cccaaggtgcattataaaggccggcagggtgactactatgtcatgattatggatatgctg 362 ||||||||||| || || |||| ||||| ||||| ||| ||||| | ||||| ||||| Sbjct: 610 cccaaggtgcactacaagggccagcaggatgacttctacatcatggtcatggacctgctg 669 Query: 363 gggcctagcttgtggga 379 || |||||||||||||| Sbjct: 670 ggccctagcttgtggga 686
>dbj|AP006347.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT02G18, TM0334a, complete sequence Length = 77969 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Plus Query: 230 cagcaaggggtgcaactacggccctccgtacgagtggcatgtgta 274 |||||||||||||||||| | ||||| ||||||||||| ||||| Sbjct: 32786 cagcaaggggtgcaactatgcacctccttacgagtggcaagtgta 32830
>ref|XM_472735.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 342 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 23 caacgccgccgccggcaacgacgacga 49 |||||||||||||||| |||||||||| Sbjct: 57 caacgccgccgccggcgacgacgacga 31
>gb|AF082809.1| Baboon herpesvirus 2 strain OU1-76 glycoprotein G (US4) gene, partial cds; glycoprotein gJ (US5) gene, complete cds; and glycoprotein gD (US6) gene, partial cds Length = 1134 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 cagcgccaacaacgccgccgccg 36 ||||||||||||||||||||||| Sbjct: 1037 cagcgccaacaacgccgccgccg 1015
>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence Length = 105353 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 240 tgcaactacggccctccgtacgagtggcatgtgta 274 |||||||| |||||||| ||||||||||| ||||| Sbjct: 12720 tgcaactatggccctccttacgagtggcaagtgta 12686
>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21, complete sequence Length = 138969 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 23 caacgccgccgccggcaacgacgacga 49 |||||||||||||||| |||||||||| Sbjct: 64755 caacgccgccgccggcgacgacgacga 64781
>dbj|AB232134.1| Cercopithecine herpesvirus 16 US6, US7, US8, US8.5, US9 genes for glycoprotein D, glycoprotein I, glycoprotein E, nucleolar phosphoprotein, tegument protein, complete cds, isolate:OU1-76 Length = 5238 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 14 cagcgccaacaacgccgccgccg 36 ||||||||||||||||||||||| Sbjct: 36 cagcgccaacaacgccgccgccg 14
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 23 caacgccgccgccggcaacgacgacga 49 |||||||||||||||| |||||||||| Sbjct: 22855980 caacgccgccgccggcgacgacgacga 22856006 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgagg 51 ||||||||||||| |||||||||||| Sbjct: 33960040 cgccgccgccggcgacgacgacgagg 33960065 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 29 cgccgccggcaacgacgacgaggagg 54 |||||||||| ||||||||||||||| Sbjct: 5126596 cgccgccggcgacgacgacgaggagg 5126621 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 23685786 cgccgccgccgacgacgacgacgaggagg 23685814 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 24541923 cgccgccgccggcgacgacgacga 24541946
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 28 ccgccgccggcaacgacgacgaggagg 54 ||||||||| ||||||||||||||||| Sbjct: 22025507 ccgccgccgccaacgacgacgaggagg 22025481 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cgccaacaacgccgccgccg 36 |||||||||||||||||||| Sbjct: 17438803 cgccaacaacgccgccgccg 17438784 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 10626972 cgccgccgccggcgacgacgacga 10626949 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aacaacgccgccgccggcaa 40 |||||||||||||||||||| Sbjct: 5671183 aacaacgccgccgccggcaa 5671202 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 2900064 cgccgccgccggcgacgacgacga 2900087 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 gccgccggcaacgacgacgaggag 53 ||||||||| |||||||||||||| Sbjct: 1890744 gccgccggcgacgacgacgaggag 1890767
>dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0612G07 Length = 182548 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 28 ccgccgccggcaacgacgacgaggagg 54 ||||||||| ||||||||||||||||| Sbjct: 63380 ccgccgccgccaacgacgacgaggagg 63354
>ref|XM_474640.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1137 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 29 cgccgccggcaacgacgacgaggagg 54 |||||||||| ||||||||||||||| Sbjct: 42 cgccgccggcgacgacgacgaggagg 67
>ref|XM_474243.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1293 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgagg 51 ||||||||||||| |||||||||||| Sbjct: 597 cgccgccgccggcgacgacgacgagg 622
>gb|AE017345.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 5, complete sequence Length = 1507550 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 17 cgccaacaacgccgccgccggcaacg 42 |||||||||||| ||||||||||||| Sbjct: 87038 cgccaacaacgcggccgccggcaacg 87063
>ref|XM_570735.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNE00360) partial mRNA Length = 2223 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 17 cgccaacaacgccgccgccggcaacg 42 |||||||||||| ||||||||||||| Sbjct: 1305 cgccaacaacgcggccgccggcaacg 1330
>gb|BT009329.1| Triticum aestivum clone wlm24.pk0021.h1:fis, full insert mRNA sequence Length = 2668 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 gccgccgccggcaacgacgacg 48 |||||||||||||||||||||| Sbjct: 480 gccgccgccggcaacgacgacg 501
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 331 gtgactactatgtcatgattat 352 |||||||||||||||||||||| Sbjct: 1199988 gtgactactatgtcatgattat 1200009
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 29 cgccgccggcaacgacgacgaggagg 54 |||||||||| ||||||||||||||| Sbjct: 102869 cgccgccggcgacgacgacgaggagg 102894
>emb|AL606646.3|OSJN00091 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087O24, complete sequence Length = 146168 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgagg 51 ||||||||||||| |||||||||||| Sbjct: 10937 cgccgccgccggcgacgacgacgagg 10962
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 16 gcgccaacaacgccgccgccggcaacgacgacga 49 ||||| ||||||||||||||| | |||||||||| Sbjct: 26090250 gcgccgacaacgccgccgccgccgacgacgacga 26090283 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 24394180 cgccgccgccgccgacgacgacgaggagg 24394152 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 23566386 cgccgccgccggcgacgacgacga 23566363
>dbj|AK106290.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-B02, full insert sequence Length = 1760 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 16 gcgccaacaacgccgccgccggcaacgacgacga 49 ||||| ||||||||||||||| | |||||||||| Sbjct: 1474 gcgccgacaacgccgccgccgccgacgacgacga 1507
>dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102F20, full insert sequence Length = 1365 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 29 cgccgccggcaacgacgacgaggagg 54 |||||||||| ||||||||||||||| Sbjct: 55 cgccgccggcgacgacgacgaggagg 80
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Plus Query: 16 gcgccaacaacgccgccgccggcaacgacgacga 49 ||||| ||||||||||||||| | |||||||||| Sbjct: 26018426 gcgccgacaacgccgccgccgccgacgacgacga 26018459 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 24322386 cgccgccgccgccgacgacgacgaggagg 24322358 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 23494577 cgccgccgccggcgacgacgacga 23494554
>emb|AL713940.4|CNS07YPM Oryza sativa chromosome 12, . BAC OJ1327_A12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161806 Score = 44.1 bits (22), Expect = 0.43 Identities = 31/34 (91%) Strand = Plus / Minus Query: 16 gcgccaacaacgccgccgccggcaacgacgacga 49 ||||| ||||||||||||||| | |||||||||| Sbjct: 21421 gcgccgacaacgccgccgccgccgacgacgacga 21388
>gb|M77475.1|BLYSIP1A Hordeum vulgare seed imbitition protein (Sip1) gene, complete cds Length = 4788 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 gccgccgccggcaacgacgacg 48 |||||||||||||||||||||| Sbjct: 1711 gccgccgccggcaacgacgacg 1732
>ref|XM_480002.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3363 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 250 cgccgccgccgacgacgacgacgaggagg 222
>ref|NM_185024.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1293 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 113 cgccgccgccgccgacgacgacgaggagg 85
>ref|NM_197761.1| Oryza sativa (japonica cultivar-group) putative ethylene-responsive element binding protein (OSJNBb0089A17.16), mRNA Length = 822 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 633 cgccgccgccgacgacgacgacgaggagg 605
>gb|AY022727.1| Oryza sativa microsatellite MRG5052 containing (CCG)X10, closest to marker C460, genomic sequence Length = 230 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 117 cgccgccgccgccgacgacgacgaggagg 145
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||||| |||||||||| |||| Sbjct: 39732 cgccgccgccggcgacgacgacgacgagg 39760
>gb|AC133248.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0080I08, complete sequence Length = 197156 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| |||||||||||| |||| Sbjct: 194800 cgccgccgccgccaacgacgacgacgagg 194772
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| |||||||||||| |||| Sbjct: 34155 cgccgccgccgccaacgacgacgacgagg 34127
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 32271986 cgccgccgccgccgacgacgacgaggagg 32272014 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ccgccggcaacgacgacgaggagg 54 |||||| ||||||||||||||||| Sbjct: 31038680 ccgccgccaacgacgacgaggagg 31038703 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 23 caacgccgccgccggcaacgacgacgag 50 |||||||||||||| | ||||||||||| Sbjct: 24100266 caacgccgccgccgccgacgacgacgag 24100293
>gb|AC133340.4| Oryza sativa chromosome 3 BAC clone OSJNBb0024J17, complete sequence Length = 102751 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 5755 cgccgccgccgccgacgacgacgaggagg 5783
>gb|AY341826.1| Oryza sativa (japonica cultivar-group) AP2 domain-containing protein AP28 mRNA, complete cds Length = 1145 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 726 cgccgccgccgacgacgacgacgaggagg 698
>emb|AL731582.2|OSJN00232 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022H21, complete sequence Length = 160155 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 6698 cgccgccgccgacgacgacgacgaggagg 6726
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 128467 cgccgccgccgacgacgacgacgaggagg 128495
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 126165 cgccgccgccgacgacgacgacgaggagg 126137
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 8944 cgccgccgccgacgacgacgacgaggagg 8916
>gb|AC091123.4| Oryza sativa chromosome 3 BAC OSJNBb0093E13 genomic sequence, complete sequence Length = 129778 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 123660 cgccgccgccgccgacgacgacgaggagg 123688
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 21694261 cgccgccgccgacgacgacgacgaggagg 21694233
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 22 acaacgccgccgccggcaacgacgacgaggagg 54 ||||||||||||||| | |||||||||||||| Sbjct: 14626243 acaacgccgccgccgccgccgacgacgaggagg 14626211
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 2148374 cgccgccgccgacgacgacgacgaggagg 2148346
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||||| |||||||||| |||| Sbjct: 24153494 cgccgccgccggcgacgacgacgacgagg 24153522 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 20856972 cgccgccgccggcgacgacgacga 20856995
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 32362498 cgccgccgccgccgacgacgacgaggagg 32362526 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ccgccggcaacgacgacgaggagg 54 |||||| ||||||||||||||||| Sbjct: 31129203 ccgccgccaacgacgacgaggagg 31129226 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 23 caacgccgccgccggcaacgacgacgag 50 |||||||||||||| | ||||||||||| Sbjct: 24016553 caacgccgccgccgccgacgacgacgag 24016580
>dbj|D29694.1|RICYK6 Oryza sativa mRNA, sequence homologous to casein kinase 1-gamma gene Length = 338 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 462 atgcattctaaaggatatgtacatggagatgtcaaac 498 |||||||| ||||||||||| ||||| ||||| |||| Sbjct: 28 atgcattcaaaaggatatgttcatggggatgtgaaac 64
>dbj|AP003876.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_D01 Length = 97862 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 26636 cgccgccgccgacgacgacgacgaggagg 26608
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 gccgccgccggcaacgacgac 47 ||||||||||||||||||||| Sbjct: 3069822 gccgccgccggcaacgacgac 3069842
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0643D11 Length = 137525 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 22 acaacgccgccgccggcaacgacgacgaggagg 54 ||||||||||||||| | |||||||||||||| Sbjct: 47910 acaacgccgccgccgccgccgacgacgaggagg 47878
>dbj|AP001307.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMM17 Length = 80733 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 349 ttatggatatgctggggcctagcttgtgggatt 381 ||||||| ||||| ||||||||||| ||||||| Sbjct: 15365 ttatggacatgcttgggcctagcttatgggatt 15397
>dbj|AK120895.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023030A06, full insert sequence Length = 1464 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 41 cgccgccgccgccgacgacgacgaggagg 69
>dbj|AK120206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038B04, full insert sequence Length = 3363 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 250 cgccgccgccgacgacgacgacgaggagg 222
>dbj|AK102819.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108N21, full insert sequence Length = 2398 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 462 atgcattctaaaggatatgtacatggagatgtcaaac 498 |||||||| ||||||||||| ||||| ||||| |||| Sbjct: 739 atgcattcaaaaggatatgttcatggggatgtgaaac 775
>dbj|AK101921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071K05, full insert sequence Length = 1747 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 160 cgccgccgccgccgacgacgacgaggagg 132
>dbj|AK069925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036B16, full insert sequence Length = 2033 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 22 acaacgccgccgccggcaacgacgacgaggagg 54 ||||||||||||||| | |||||||||||||| Sbjct: 88 acaacgccgccgccgccgccgacgacgaggagg 56
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 21705924 cgccgccgccgacgacgacgacgaggagg 21705896
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| |||||||||||| |||| Sbjct: 19089606 cgccgccgccgccaacgacgacgacgagg 19089578 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 ccgccgccggcaacgacgacgagg 51 ||||||||| |||||||||||||| Sbjct: 20416368 ccgccgccgacaacgacgacgagg 20416345 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 20403602 cgccgccgccgccaacgacgacga 20403579 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gccgccgccggcaacgacgacgag 50 |||||||||| ||||||||||||| Sbjct: 13818503 gccgccgccgacaacgacgacgag 13818526 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 7968035 cgccgccgccgacaacgacgacga 7968012
>emb|AL772423.4|CNS08CA1 Oryza sativa chromosome 12, . BAC OJ1058_H10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103803 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacgaggagg 54 ||||||||||| | ||||||||||||||| Sbjct: 57712 cgccgccgccgccgacgacgacgaggagg 57684
>ref|NM_128136.2| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT2G25760 transcript variant AT2G25760.1 mRNA, complete cds Length = 2604 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 349 ttatggatatgctggggcctagcttgtgggat 380 |||||||||| || ||||||||||| |||||| Sbjct: 844 ttatggatatccttgggcctagcttatgggat 875
>ref|NM_201803.1| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein serine/threonine kinase AT2G25760 transcript variant AT2G25760.2 mRNA, complete cds Length = 2613 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 349 ttatggatatgctggggcctagcttgtgggat 380 |||||||||| || ||||||||||| |||||| Sbjct: 844 ttatggatatccttgggcctagcttatgggat 875
>ref|NM_188604.1| Oryza sativa (japonica cultivar-group), Ozsa8207 predicted mRNA Length = 2448 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 1514 cgccgccgccggcgacgacgacga 1537
>ref|NM_188568.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacg 45 |||||||||||||||||||| Sbjct: 613 cgccgccgccggcaacgacg 594
>ref|XM_468321.1| Oryza sativa (japonica cultivar-group), mRNA Length = 988 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||| |||||||||||||| Sbjct: 598 cgccgccgctggcaacgacgacga 575
>ref|XM_468403.1| Oryza sativa (japonica cultivar-group), mRNA Length = 519 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 |||||||||||||||| ||||||| Sbjct: 332 cgccgccgccggcaacaacgacga 309
>ref|XM_467830.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1893 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 cgtcttcgtcggccgccgcc 165 |||||||||||||||||||| Sbjct: 895 cgtcttcgtcggccgccgcc 876
>ref|XM_464379.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1557 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 810 cgccgccgccgccaacgacgacga 833
>ref|NM_190197.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ccgccggcaacgacgacgaggagg 54 |||||| ||||||||||||||||| Sbjct: 724 ccgccgccaacgacgacgaggagg 747
>ref|NM_190532.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 942 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 437 cgccgccgccggcgacgacgacga 460
>ref|NM_191434.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2097 Score = 40.1 bits (20), Expect = 6.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 213 aaattcgagcacaacaccagcaaggggtgcaactacggccctccgtacgagtggca 268 |||||||||||| || ||| ||||| ||||| || |||||||| || |||||||| Sbjct: 523 aaattcgagcaccgcaacagtaagggttgcaattatggccctccatatgagtggca 578
>ref|NM_190030.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1953 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacg 45 |||||||||||||||||||| Sbjct: 33 cgccgccgccggcaacgacg 52
>ref|XM_468971.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1095 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 23 caacgccgccgccggcaacgacgacgag 50 |||||||||||||| | ||||||||||| Sbjct: 270 caacgccgccgccgccgacgacgacgag 297
>ref|XM_479397.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gccgccgccggcaacgacga 46 |||||||||||||||||||| Sbjct: 628 gccgccgccggcaacgacga 647
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 170196 cgccgccgccggcgacgacgacga 170219
>gb|AC137924.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0095K08, complete sequence Length = 180999 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 100000 cgccgccgccgacaacgacgacga 100023
>gb|AC146947.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057M18 map near E10005S, complete sequence Length = 140920 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gccgccgccggcaacgacgacgag 50 |||||||||| ||||||||||||| Sbjct: 94314 gccgccgccgacaacgacgacgag 94337
>gb|AC120889.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0018K14, complete sequence Length = 152725 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 ccgccgccggcaacgacgacgagg 51 ||||||||| |||||||||||||| Sbjct: 51288 ccgccgccgacaacgacgacgagg 51265 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 38669 cgccgccgccgccaacgacgacga 38646
>gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064E13, complete sequence Length = 150158 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 ccgccgccggcaacgacgacgagg 51 ||||||||| |||||||||||||| Sbjct: 140478 ccgccgccgacaacgacgacgagg 140455 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 127859 cgccgccgccgccaacgacgacga 127836
>ref|XM_369126.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00118.4) partial mRNA Length = 3690 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 gtcagcgccaacaacgccgc 31 |||||||||||||||||||| Sbjct: 777 gtcagcgccaacaacgccgc 796
>gb|AC135429.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636F09, complete sequence Length = 177374 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 112773 cgccgccgccggcgacgacgacga 112796
>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete sequence Length = 140980 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 23 caacgccgccgccggcaacgacgacgag 50 |||||||||||||| | ||||||||||| Sbjct: 123566 caacgccgccgccgccgacgacgacgag 123539
>gb|AY225133.1| Feldmannia irregularis virus a strain FirrV-1 contig A, partial sequence Length = 55981 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 caacgccgccgccggcaacg 42 |||||||||||||||||||| Sbjct: 10608 caacgccgccgccggcaacg 10589
>gb|AF144659.1| Danio rerio homeobox six6 gene, intron 1 Length = 855 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 atgtacatggagatgtcaaa 497 |||||||||||||||||||| Sbjct: 362 atgtacatggagatgtcaaa 381
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 ccgccgccggcaacgacgac 47 |||||||||||||||||||| Sbjct: 896767 ccgccgccggcaacgacgac 896748
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 ccgccggcaacgacgacgaggagg 54 |||||| ||||||||||||||||| Sbjct: 57384 ccgccgccaacgacgacgaggagg 57361
>emb|AL583863.16| Human DNA sequence from clone RP11-118G19 on chromosome 1, complete sequence Length = 113372 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 attctaaaggatatgtacat 485 |||||||||||||||||||| Sbjct: 5759 attctaaaggatatgtacat 5740
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 cagcggcggggtcagcgcca 21 |||||||||||||||||||| Sbjct: 3481060 cagcggcggggtcagcgcca 3481041
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 cagcggcggggtcagcgcca 21 |||||||||||||||||||| Sbjct: 1451369 cagcggcggggtcagcgcca 1451388
>gb|AY070056.1| Arabidopsis thaliana At2g25760 mRNA sequence Length = 2695 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 349 ttatggatatgctggggcctagcttgtgggat 380 |||||||||| || ||||||||||| |||||| Sbjct: 844 ttatggatatccttgggcctagcttatgggat 875
>emb|X61207.1|ABHISHAFE A.brasilense hisB, H, A, F and E genes for imidazole glycerolphosphate dehydratase, glutamine amidotransferase, phosphorybosilformimino-5-amino-phosphorybosil-4- imidazolecarboxamide isomerase, cyclase and phosphorybosil-AMP-cyclohydrolase Length = 4746 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 143 ccacgtcttcgtcggccgccgcct 166 ||||||||||| |||||||||||| Sbjct: 4449 ccacgtcttcgccggccgccgcct 4472
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 13 tcagcgccaacaacgccgccgccg 36 |||||||||||| ||||||||||| Sbjct: 200332 tcagcgccaacagcgccgccgccg 200355
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 cagcggcggggtcagcgcca 21 |||||||||||||||||||| Sbjct: 240618 cagcggcggggtcagcgcca 240599
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 101554 cgccgccgccggcgacgacgacga 101577
>gb|AC159534.11| Medicago truncatula clone mth2-81a23, complete sequence Length = 120504 Score = 40.1 bits (20), Expect = 6.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 213 aaattcgagcacaacaccagcaaggggtgcaactacggccctccgtacgagtggca 268 ||||| ||||| || |||||||| ||||| || || || ||||| ||||||||||| Sbjct: 66850 aaatttgagcataaaaccagcaaagggtgtaattatggacctccttacgagtggca 66905
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacg 45 |||||||||||||||||||| Sbjct: 4582049 cgccgccgccggcaacgacg 4582068
>gb|AC005395.3| Arabidopsis thaliana chromosome 2 clone F17H15 map B68, complete sequence Length = 102004 Score = 40.1 bits (20), Expect = 6.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 349 ttatggatatgctggggcctagcttgtgggat 380 |||||||||| || ||||||||||| |||||| Sbjct: 88343 ttatggatatccttgggcctagcttatgggat 88374
>gb|AC093898.3| Homo sapiens BAC clone RP11-724A24 from 4, complete sequence Length = 183273 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 tggaatttagcagggcagac 403 |||||||||||||||||||| Sbjct: 55554 tggaatttagcagggcagac 55573
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcagcgccaacaacgccgcc 32 |||||||||||||||||||| Sbjct: 1616413 tcagcgccaacaacgccgcc 1616432 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 tcagcgccaacaacgccgcc 32 |||||||||||||||||||| Sbjct: 1532047 tcagcgccaacaacgccgcc 1532066
>gb|S82314.1| PRm 3=chitinase {clone CHEM 5} [Zea mays=maize, cv. INRA 258, mercuric chloride-treated, leaves, mRNA Partial, 945 nt] Length = 945 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 gcaacgacgacgaggagggc 56 |||||||||||||||||||| Sbjct: 90 gcaacgacgacgaggagggc 71
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 28 ccgccgccggcaacgacgacgagg 51 ||||||||| |||||||||||||| Sbjct: 20131269 ccgccgccgacaacgacgacgagg 20131246 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 20118488 cgccgccgccgccaacgacgacga 20118465 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 gccgccgccggcaacgacgacgag 50 |||||||||| ||||||||||||| Sbjct: 13736505 gccgccgccgacaacgacgacgag 13736528 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 7897948 cgccgccgccgacaacgacgacga 7897925
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gccgccgccggcaacgacga 46 |||||||||||||||||||| Sbjct: 27599631 gccgccgccggcaacgacga 27599612 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 20676721 cgccgccgccgtcaacgacgacga 20676744
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 |||||||||||||||| ||||||| Sbjct: 35044903 cgccgccgccggcaacaacgacga 35044880 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||| |||||||||||||| Sbjct: 34603120 cgccgccgctggcaacgacgacga 34603143 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 gccgccggcaacgacgacga 49 |||||||||||||||||||| Sbjct: 31885455 gccgccggcaacgacgacga 31885474 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 cgtcttcgtcggccgccgcc 165 |||||||||||||||||||| Sbjct: 31621434 cgtcttcgtcggccgccgcc 31621415 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 caacgacgacgaggagggca 57 |||||||||||||||||||| Sbjct: 18745633 caacgacgacgaggagggca 18745614 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 4827220 cgccgccgccgccaacgacgacga 4827243
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacg 45 |||||||||||||||||||| Sbjct: 40899665 cgccgccgccggcaacgacg 40899646 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ccgccggcaacgacgacgaggagg 54 |||||| ||||||||||||||||| Sbjct: 38590603 ccgccgccaacgacgacgaggagg 38590626 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 36052390 cgccgccgccggcgacgacgacga 36052367 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 33210552 cgccgccgccgccaacgacgacga 33210529 Score = 40.1 bits (20), Expect = 6.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 213 aaattcgagcacaacaccagcaaggggtgcaactacggccctccgtacgagtggca 268 |||||||||||| || ||| ||||| ||||| || |||||||| || |||||||| Sbjct: 32611486 aaattcgagcaccgcaacagtaagggttgcaattatggccctccatatgagtggca 32611541 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 7181056 cgccgccgccggcgacgacgacga 7181033 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacg 45 |||||||||||||||||||| Sbjct: 7008764 cgccgccgccggcaacgacg 7008745
>gb|AF229199.1|AF229199 Oryza sativa chromosome 1 clone OSJNBa0048I01, complete sequence Length = 193444 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ccgccggcaacgacgacgaggagg 54 |||||| ||||||||||||||||| Sbjct: 183684 ccgccgccaacgacgacgaggagg 183707
>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506E04 Length = 139934 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacg 45 |||||||||||||||||||| Sbjct: 111771 cgccgccgccggcaacgacg 111752
>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0423A12 Length = 178649 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacg 45 |||||||||||||||||||| Sbjct: 28090 cgccgccgccggcaacgacg 28071
>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485D09 Length = 150594 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 75704 cgccgccgccggcgacgacgacga 75681
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 147462 cgccgccgccgccaacgacgacga 147439
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ccgccggcaacgacgacgaggagg 54 |||||| ||||||||||||||||| Sbjct: 111284 ccgccgccaacgacgacgaggagg 111307
>dbj|AP003295.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0695H10 Length = 136883 Score = 40.1 bits (20), Expect = 6.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 213 aaattcgagcacaacaccagcaaggggtgcaactacggccctccgtacgagtggca 268 |||||||||||| || ||| ||||| ||||| || |||||||| || |||||||| Sbjct: 74281 aaattcgagcaccgcaacagtaagggttgcaattatggccctccatatgagtggca 74336
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 65115 cgccgccgccggcgacgacgacga 65092
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 31 ccgccggcaacgacgacgaggagg 54 |||||| ||||||||||||||||| Sbjct: 48576 ccgccgccaacgacgacgaggagg 48599
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacg 45 |||||||||||||||||||| Sbjct: 130582 cgccgccgccggcaacgacg 130563
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 gccgccgccggcaacgacga 46 |||||||||||||||||||| Sbjct: 56624 gccgccgccggcaacgacga 56605
>dbj|AP004000.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_B01 Length = 129329 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 107810 cgccgccgccgccaacgacgacga 107833
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 69379 cgccgccgccgccaacgacgacga 69402
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence Length = 256992 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 49 aggagggcaacaccgcccctttccccga 76 ||||||| ||||||||||| |||||||| Sbjct: 87480 aggaggggaacaccgcccccttccccga 87453
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 gccgccggcaacgacgacgaggag 53 ||||||||| |||||||||||||| Sbjct: 19524 gccgccggcgacgacgacgaggag 19547
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 143545 cgccgccgccggcgacgacgacga 143568
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 gccgccggcaacgacgacgaggag 53 ||||||||| |||||||||||||| Sbjct: 91222 gccgccggcgacgacgacgaggag 91245
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 60210 cgccgccgccggcgacgacgacga 60233
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1066D09 Length = 183999 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 163679 cgccgccgccggcgacgacgacga 163656
>dbj|AP003406.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1070A12 Length = 148449 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 3799 cgccgccgccgccaacgacgacga 3776
>dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0071O21 Length = 158410 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 caacgacgacgaggagggca 57 |||||||||||||||||||| Sbjct: 88275 caacgacgacgaggagggca 88256
>dbj|AP004684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0012H03 Length = 163377 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 cgccaacaacgccgccgccg 36 |||||||||||||||||||| Sbjct: 69844 cgccaacaacgccgccgccg 69825
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aacaacgccgccgccggcaa 40 |||||||||||||||||||| Sbjct: 63330 aacaacgccgccgccggcaa 63349
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 gccgccggcaacgacgacga 49 |||||||||||||||||||| Sbjct: 46456 gccgccggcaacgacgacga 46475
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 29471 cgccgccgccgtcaacgacgacga 29494
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643F09 Length = 161001 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 |||||||||||||||| ||||||| Sbjct: 105244 cgccgccgccggcaacaacgacga 105221
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C12 Length = 103973 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 |||||||||||||||| ||||||| Sbjct: 18066 cgccgccgccggcaacaacgacga 18043
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||| |||||||||||||| Sbjct: 114060 cgccgccgctggcaacgacgacga 114083
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||| |||||||||||||| Sbjct: 69735 cgccgccgctggcaacgacgacga 69758
>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0431B06 Length = 154796 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 cgtcttcgtcggccgccgcc 165 |||||||||||||||||||| Sbjct: 111994 cgtcttcgtcggccgccgcc 111975
>dbj|AP004119.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1288_G09 Length = 109672 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 cgtcttcgtcggccgccgcc 165 |||||||||||||||||||| Sbjct: 1221 cgtcttcgtcggccgccgcc 1202
>dbj|AK120893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029O03, full insert sequence Length = 2788 Score = 40.1 bits (20), Expect = 6.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 213 aaattcgagcacaacaccagcaaggggtgcaactacggccctccgtacgagtggca 268 |||||||||||| || ||| ||||| ||||| || |||||||| || |||||||| Sbjct: 692 aaattcgagcaccgcaacagtaagggttgcaattatggccctccatatgagtggca 747
>ref|XM_321284.2| Anopheles gambiae str. PEST ENSANGP00000018492 (ENSANGG00000016003), partial mRNA Length = 1479 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 cgacgacgaggagggcaaca 60 |||||||||||||||||||| Sbjct: 501 cgacgacgaggagggcaaca 520
>dbj|AK110449.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-E04, full insert sequence Length = 2836 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 619 cgccgccgccggcgacgacgacga 642
>dbj|AK110332.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-E01, full insert sequence Length = 1737 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 aacaacgccgccgccggcaa 40 |||||||||||||||||||| Sbjct: 840 aacaacgccgccgccggcaa 859
>dbj|AK109950.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-A05, full insert sequence Length = 3043 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 cgccaacaacgccgccgccg 36 |||||||||||||||||||| Sbjct: 929 cgccaacaacgccgccgccg 948
>dbj|AK108253.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-A02, full insert sequence Length = 815 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 gccgccgccggcaacgacga 46 |||||||||||||||||||| Sbjct: 628 gccgccgccggcaacgacga 647
>dbj|AK107477.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-B10, full insert sequence Length = 2410 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacg 45 |||||||||||||||||||| Sbjct: 133 cgccgccgccggcaacgacg 152
>dbj|AK103377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127D10, full insert sequence Length = 988 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||| |||||||||||||| Sbjct: 598 cgccgccgctggcaacgacgacga 575
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||| |||||||||||| Sbjct: 792 cgccgccgccgtcaacgacgacga 815
>dbj|AK073044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033001E11, full insert sequence Length = 1097 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 23 caacgccgccgccggcaacgacgacgag 50 |||||||||||||| | ||||||||||| Sbjct: 272 caacgccgccgccgccgacgacgacgag 299
>dbj|AK071003.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023076N19, full insert sequence Length = 1891 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 cgtcttcgtcggccgccgcc 165 |||||||||||||||||||| Sbjct: 893 cgtcttcgtcggccgccgcc 874
>dbj|AK069612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019A22, full insert sequence Length = 2851 Score = 40.1 bits (20), Expect = 6.7 Identities = 47/56 (83%) Strand = Plus / Plus Query: 213 aaattcgagcacaacaccagcaaggggtgcaactacggccctccgtacgagtggca 268 |||||||||||| || ||| ||||| ||||| || |||||||| || |||||||| Sbjct: 766 aaattcgagcaccgcaacagtaagggttgcaattatggccctccatatgagtggca 821
>dbj|AK058855.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-005-B10, full insert sequence Length = 582 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 135 cgccgccgccggcgacgacgacga 112
>gb|AY107125.1| Zea mays PCO125117 mRNA sequence Length = 1252 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 gcaacgacgacgaggagggc 56 |||||||||||||||||||| Sbjct: 145 gcaacgacgacgaggagggc 126
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 gggtcagcgccaacaacgccgccg 33 |||||||||||||| ||||||||| Sbjct: 115204 gggtcagcgccaactacgccgccg 115227
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 34 ccggcaacgacgacgaggag 53 |||||||||||||||||||| Sbjct: 2210561 ccggcaacgacgacgaggag 2210580
>emb|AL772425.7|CNS08CA3 Oryza sativa chromosome 12, . BAC OJ1396_C02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157690 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 cgccgccgccggcaacgacgacga 49 ||||||||||||| |||||||||| Sbjct: 140024 cgccgccgccggcgacgacgacga 140047
>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence Length = 232605 Score = 40.1 bits (20), Expect = 6.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 49 aggagggcaacaccgcccctttccccga 76 ||||||| ||||||||||| |||||||| Sbjct: 49334 aggaggggaacaccgcccccttccccga 49307
>gb|U04732.1|PPU04732 Porphyra purpurea Avonport clone 26d12 sporophyte-specific mRNA, partial sequence Length = 599 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 acgacgacgaggagggcaac 59 |||||||||||||||||||| Sbjct: 109 acgacgacgaggagggcaac 128 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,775,533 Number of Sequences: 3902068 Number of extensions: 3775533 Number of successful extensions: 80554 Number of sequences better than 10.0: 158 Number of HSP's better than 10.0 without gapping: 180 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77250 Number of HSP's gapped (non-prelim): 3290 length of query: 498 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 476 effective length of database: 17,147,199,772 effective search space: 8162067091472 effective search space used: 8162067091472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
