ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal40n11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y2434_MYCBO (P65002) Hypothetical protein Mb2434c 28 8.3
2Y2411_MYCTU (P65001) Hypothetical protein Rv2411c/MT2484 28 8.3

>Y2434_MYCBO (P65002) Hypothetical protein Mb2434c|
          Length = 551

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -1

Query: 234 VDTGVNQVLPASSCTCHDQAITYHVPRD*VTPRPLITSTCHHH 106
           ++ G+ Q + A  C   D      + RD V PR L+TS  H H
Sbjct: 111 LERGITQRVKALECYLDDIYGDQEILRDGVIPRRLVTSCEHFH 153



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>Y2411_MYCTU (P65001) Hypothetical protein Rv2411c/MT2484|
          Length = 551

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -1

Query: 234 VDTGVNQVLPASSCTCHDQAITYHVPRD*VTPRPLITSTCHHH 106
           ++ G+ Q + A  C   D      + RD V PR L+TS  H H
Sbjct: 111 LERGITQRVKALECYLDDIYGDQEILRDGVIPRRLVTSCEHFH 153


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,513,770
Number of Sequences: 219361
Number of extensions: 1071196
Number of successful extensions: 1917
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1911
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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