ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal40n08 |
|---|---|
| Clone Library Name | barley_pub |
>TCTP_HORVU (Q9M5G3) Translationally-controlled tumor protein homolog (TCTP)| (HTP) Length = 168 Score = 50.1 bits (118), Expect = 2e-06 Identities = 23/23 (100%), Positives = 23/23 (100%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAK 20 QPAFDKKQFIAYIKRYIKNLTAK Sbjct: 79 QPAFDKKQFIAYIKRYIKNLTAK 101
>TCTP_TOBAC (Q9XHL7) Translationally-controlled tumor protein homolog (TCTP)| Length = 168 Score = 44.3 bits (103), Expect = 1e-04 Identities = 18/23 (78%), Positives = 22/23 (95%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAK 20 QP+FDKKQF+AY+K+YIKNLT K Sbjct: 79 QPSFDKKQFVAYMKKYIKNLTPK 101
>TCTP_SOLTU (P43349) Translationally-controlled tumor protein homolog (TCTP)| (p23) Length = 168 Score = 44.3 bits (103), Expect = 1e-04 Identities = 19/23 (82%), Positives = 21/23 (91%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAK 20 QPAFDKKQF+ YIKRYIK+LT K Sbjct: 79 QPAFDKKQFVTYIKRYIKSLTPK 101
>TCTP_SOYBN (Q944T2) Translationally-controlled tumor protein homolog (TCTP)| Length = 168 Score = 42.0 bits (97), Expect = 5e-04 Identities = 17/23 (73%), Positives = 21/23 (91%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAK 20 QPAFDKKQF+ ++KR+IKNLT K Sbjct: 79 QPAFDKKQFVTFMKRFIKNLTPK 101
>TCTP_ORYSA (P35681) Translationally-controlled tumor protein homolog (TCTP)| Length = 168 Score = 42.0 bits (97), Expect = 5e-04 Identities = 17/23 (73%), Positives = 21/23 (91%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAK 20 QP FDKKQF+ ++KRYIKNL+AK Sbjct: 79 QPPFDKKQFVTFMKRYIKNLSAK 101
>TCTP_PSEMZ (Q9ZRX0) Translationally-controlled tumor protein homolog (TCTP)| Length = 167 Score = 41.6 bits (96), Expect = 6e-04 Identities = 18/28 (64%), Positives = 21/28 (75%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAKXCKVR 5 QP FDKKQF+ +IKRYIKNL K + R Sbjct: 78 QPPFDKKQFLGFIKRYIKNLATKLSEER 105
>TCTP_MEDSA (P28014) Translationally-controlled tumor protein homolog (TCTP)| Length = 167 Score = 40.4 bits (93), Expect = 0.001 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAK 20 QPAFDKKQF+ ++KRYIK LT K Sbjct: 78 QPAFDKKQFLGFVKRYIKLLTPK 100
>TCTP_HEVBR (Q9ZSW9) Translationally-controlled tumor protein homolog (TCTP)| Length = 168 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAK 20 QPAFDKKQF+ Y+KR+IK LT K Sbjct: 79 QPAFDKKQFVTYMKRFIKLLTPK 101
>TCTP_FRAAN (O03992) Translationally-controlled tumor protein homolog (TCTP)| Length = 170 Score = 38.5 bits (88), Expect = 0.005 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAK 20 QP FDKKQF+ ++KRYIK LT K Sbjct: 81 QPPFDKKQFVTWVKRYIKLLTPK 103
>TCTP_BRAOL (Q944W6) Translationally-controlled tumor protein homolog (TCTP)| Length = 168 Score = 38.1 bits (87), Expect = 0.007 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAK 20 QP +DKK FIAYIK+YIK LT K Sbjct: 79 QPTYDKKGFIAYIKKYIKLLTPK 101
>TCTP_ARATH (P31265) Translationally-controlled tumor protein homolog (TCTP)| Length = 168 Score = 38.1 bits (87), Expect = 0.007 Identities = 17/23 (73%), Positives = 19/23 (82%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAK 20 QP +DKK FIAYIK+YIK LT K Sbjct: 79 QPTYDKKGFIAYIKKYIKLLTPK 101
>TCTP_PEA (P50906) Translationally-controlled tumor protein homolog (TCTP)| (23 kDa callus protein) (p23) (PsRCI22-3) Length = 167 Score = 37.4 bits (85), Expect = 0.012 Identities = 15/23 (65%), Positives = 19/23 (82%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAK 20 QP FDKKQF+ ++K+YIK LT K Sbjct: 78 QPPFDKKQFLGFVKKYIKLLTPK 100
>TCTP_YEAST (P35691) Translationally-controlled tumor protein homolog (TCTP)| Length = 167 Score = 32.3 bits (72), Expect = 0.39 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAK 20 Q AFDKK F+ YIK Y+K + AK Sbjct: 75 QTAFDKKSFLTYIKGYMKAVKAK 97
>TCTP_CUCME (Q9M5I8) Translationally-controlled tumor protein homolog (TCTP)| Length = 168 Score = 31.6 bits (70), Expect = 0.66 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLT 26 QP+ DKK F++ IK+YIK LT Sbjct: 79 QPSMDKKVFLSCIKKYIKKLT 99
>TCTP_LABRO (Q98SJ7) Translationally-controlled tumor protein (TCTP)| Length = 171 Score = 28.5 bits (62), Expect = 5.6 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAKXCKV 8 + ++DKK + AYIK Y+K + AK +V Sbjct: 79 ETSYDKKSYTAYIKDYMKAVKAKLQEV 105
>TCTP_BRARE (Q9DGK4) Translationally-controlled tumor protein (TCTP)| Length = 171 Score = 28.1 bits (61), Expect = 7.3 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = -3 Query: 88 QPAFDKKQFIAYIKRYIKNLTAK 20 + ++DKK + AYIK Y+K + AK Sbjct: 79 ETSYDKKSYTAYIKDYMKAVKAK 101
>TCTP_SCHPO (Q10344) Translationally-controlled tumor protein homolog (TCTP)| (p23fyp) Length = 168 Score = 27.7 bits (60), Expect = 9.6 Identities = 10/21 (47%), Positives = 17/21 (80%) Frame = -3 Query: 82 AFDKKQFIAYIKRYIKNLTAK 20 +FDKK +++YIK Y+K + A+ Sbjct: 78 SFDKKSYMSYIKGYMKAIKAR 98 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,110,748 Number of Sequences: 219361 Number of extensions: 53720 Number of successful extensions: 211 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 211 length of database: 80,573,946 effective HSP length: 5 effective length of database: 79,477,141 effective search space used: 1907451384 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
