Clone Information

BLAST Search Result

Clone Name	baal40m15
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ARI1_DROME (Q94981) Protein ariadne-1 (Ari-1)	55	9e-08
2	ARI1_HUMAN (Q9Y4X5) Protein ariadne-1 homolog (ARI-1) (Ubiquitin...	55	2e-07
3	ARI1_MOUSE (Q9Z1K5) Protein ariadne-1 homolog (ARI-1) (Ubiquitin...	55	2e-07
4	ARI2_MOUSE (Q9Z1K6) Protein ariadne-2 homolog (ARI-2) (Triad1 pr...	54	4e-07
5	ARI2_HUMAN (O95376) Protein ariadne-2 homolog (ARI-2) (Triad1 pr...	54	4e-07
6	YKZ7_YEAST (P36113) RING finger protein YKR017C	46	7e-05
7	ARI2_CAEEL (Q22431) Probable protein ariadne-2 (Ari-2)	44	3e-04
8	PARC_MOUSE (Q80TT8) p53-associated parkin-like cytoplasmic protein	41	0.002
9	ARI2_DROME (O76924) Protein ariadne-2 (Ari-2)	40	0.003
10	RNF14_HUMAN (Q9UBS8) RING finger protein 14 (Androgen receptor-a...	36	0.059
11	CHFR_HUMAN (Q96EP1) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (...	36	0.076
12	RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiat...	35	0.13
13	AKIB1_MOUSE (Q6ZPS6) Ankyrin repeat and IBR domain-containing pr...	35	0.13
14	RNF14_MOUSE (Q9JI90) RING finger protein 14 (Androgen receptor-a...	35	0.13
15	PARC_HUMAN (Q8IWT3) p53-associated parkin-like cytoplasmic prote...	35	0.13
16	AKIB1_HUMAN (Q9P2G1) Ankyrin repeat and IBR domain-containing pr...	35	0.13
17	RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD1...	35	0.17
18	ZFP95_MOUSE (Q9Z1D8) Zinc finger protein 95 (Zfp-95)	34	0.22
19	RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein li...	34	0.22
20	RHP16_SCHPO (P79051) DNA repair protein rhp16 (RAD16 homolog)	34	0.29
21	RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein li...	34	0.29
22	ZN287_HUMAN (Q9HBT7) Zinc finger protein 287	34	0.29
23	TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger pr...	34	0.29
24	TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein	33	0.38
25	TRAF4_HUMAN (Q9BUZ4) TNF receptor-associated factor 4 (Cysteine-...	33	0.50
26	RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD1...	33	0.50
27	Y1303_METJA (Q58699) Hypothetical polyferredoxin-like protein MJ...	33	0.65
28	RAD5_ASHGO (Q753V5) DNA repair protein RAD5 (EC 3.6.1.-)	33	0.65
29	BRE1_KLULA (Q6CWM4) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)	33	0.65
30	PEX10_SCHPO (Q9UUF0) Peroxisome assembly protein 10 (Peroxin-10)...	33	0.65
31	ZNF7_HUMAN (P17097) Zinc finger protein 7 (Zinc finger protein K...	32	0.85
32	ZFP95_HUMAN (Q9Y2L8) Zinc finger protein 95 homolog (Zfp-95)	32	0.85
33	ZFP46_MOUSE (Q03309) Zinc finger protein 46 (Zfp-46) (Zinc finge...	32	1.1
34	DZIP3_MOUSE (Q7TPV2) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-)...	32	1.1
35	COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (...	32	1.4
36	BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (...	32	1.4
37	SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitoc...	32	1.4
38	CHFR_MOUSE (Q810L3) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (...	32	1.4
39	ZN454_HUMAN (Q8N9F8) Zinc finger protein 454	32	1.4
40	BRE1_CANGA (Q6FWF3) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)	32	1.4
41	VT2_MYXVL (P29825) Tumor necrosis factor soluble receptor precur...	31	1.9
42	IE61_VZVD (P09309) Transcriptional repressor IE61 (Immediate-ear...	31	1.9
43	BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)	31	1.9
44	YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in...	31	1.9
45	TRI25_HUMAN (Q14258) Tripartite motif protein 25 (Zinc finger pr...	31	1.9
46	MYH14_MOUSE (Q6URW6) Myosin-14 (Myosin heavy chain, nonmuscle II...	31	2.5
47	RAD18_SCHPO (O74747) Postreplication repair ubiquitin-protein li...	31	2.5
48	FANCL_MOUSE (Q9CR14) Ubiquitin ligase protein FANCL (EC 6.3.2.-)...	31	2.5
49	RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)	31	2.5
50	TRIM3_RAT (O70277) Tripartite motif protein 3 (RING finger prote...	31	2.5
51	TRIM3_MOUSE (Q9R1R2) Tripartite motif protein 3 (RING finger pro...	31	2.5
52	RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein li...	30	3.2
53	RAD18_YEAST (P10862) Postreplication repair ubiquitin-protein li...	30	3.2
54	RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (...	30	3.2
55	Y1226_ARATH (Q9LME2) Hypothetical protein At1g22260	30	3.2
56	YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B...	30	3.2
57	LIN13_CAEEL (Q11107) Zinc finger protein lin-13 (Abnormal cell l...	30	3.2
58	APLP_DROME (Q9V496) Apolipophorins precursor (Retinoid- and fatt...	30	3.2
59	TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic li...	30	4.2
60	CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed w...	30	4.2
61	ZN287_MOUSE (Q9EQB9) Zinc finger protein 287 (Zfp-287) (Zinc fin...	30	4.2
62	FANCL_HUMAN (Q9NW38) Ubiquitin ligase protein FANCL (EC 6.3.2.-)...	30	4.2
63	ZN347_HUMAN (Q96SE7) Zinc finger protein 347 (Zinc finger 1111)	30	4.2
64	VT2_SFVKA (P25943) Tumor necrosis factor soluble receptor precur...	30	4.2
65	LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding pro...	30	4.2
66	COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Co...	30	4.2
67	ETF2_MCV1 (Q98277) Early transcription factor 82 kDa subunit (VE...	30	4.2
68	RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein li...	30	5.5
69	LNX2_HUMAN (Q8N448) Ligand of Numb-protein X 2 (Numb-binding pro...	30	5.5
70	NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)	29	7.2
71	TRI35_MOUSE (Q8C006) Tripartite motif protein 35 (Macrophage-der...	29	7.2
72	ZN436_MOUSE (Q8BPP0) Zinc finger protein 436 (Zinc finger protei...	29	7.2
73	TRAF4_MOUSE (Q61382) TNF receptor-associated factor 4 (Cysteine-...	29	7.2
74	NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)	29	7.2
75	CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24	29	7.2
76	ZN167_HUMAN (Q9P0L1) Zinc finger protein 167 (Zinc finger protei...	29	7.2
77	POLG_PVYN (P18247) Genome polyprotein [Contains: P1 proteinase (...	29	7.2
78	BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)	29	7.2
79	BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)	29	7.2
80	THIC_METJA (Q58432) Probable thiamine biosynthesis protein thiC	29	7.2
81	Z705A_HUMAN (Q6ZN79) Zinc finger protein 705A	29	9.3
82	RN146_PONPY (Q5REL3) RING finger protein 146	29	9.3
83	RN146_MOUSE (Q9CZW6) RING finger protein 146	29	9.3
84	RN146_HUMAN (Q9NTX7) RING finger protein 146 (Dactylidin)	29	9.3
85	NHAA_PSETH (Q7SID2) Cobalt-containing nitrile hydratase subunit ...	29	9.3
86	BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)	29	9.3
87	RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 ...	29	9.3
88	ZN300_HUMAN (Q96RE9) Zinc finger protein 300	29	9.3
89	ZIM10_HUMAN (Q9ULJ6) Retinoic acid-induced protein 17 (PIAS-like...	29	9.3
90	UB7I4_MOUSE (Q925F3) Ubiquitin-conjugating enzyme 7-interacting ...	29	9.3
91	RN146_RAT (Q5XIK5) RING finger protein 146	29	9.3
92	DZIP3_HUMAN (Q86Y13) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-)...	29	9.3
93	RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 ...	29	9.3

>ARI1_DROME (Q94981) Protein ariadne-1 (Ari-1)|
          Length = 503

 Score = 55.5 bits (132), Expect = 9e-08
 Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
 Frame = +3

Query: 165 YCILSEAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEE----RV 332
           Y +L+   I Q Q + I+  + +L +       LL  + W   K+ +++F D      + 
Sbjct: 49  YKVLTTDEIVQHQREIIDEANLLLKLPTPTTRILLNHFKWDKEKLLEKYFDDNTDEFFKC 108

Query: 333 RKVVG--FPEKRIEMPNDRELA--CGICFENCPHASMSAAACGHPFCSVCWRGYISTAI 497
             V+      + I+    R     C ICF   P  SM+   CGH FC  CW  Y+ST I
Sbjct: 109 AHVINPFNATEAIKQKTSRSQCEECEICFSQLPPDSMAGLECGHRFCMPCWHEYLSTKI 167

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>ARI1_HUMAN (Q9Y4X5) Protein ariadne-1 homolog (ARI-1) (Ubiquitin-conjugating|
           enzyme E2-binding protein 1) (UbcH7-binding protein)
           (UbcM4-interacting protein) (HHARI) (H7-AP2) (MOP-6)
          Length = 557

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 13/140 (9%)
 Frame = +3

Query: 153 QQQNYCILSEAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEERV 332
           +   Y +L+   I Q   + I  V+ V+    +    LL  +NW   K+ + +F  +  +
Sbjct: 97  EDYRYEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYF--DGNL 154

Query: 333 RKVVGFPEKRIEMPNDR-------------ELACGICFENCPHASMSAAACGHPFCSVCW 473
            K+  F E  +  P+ +             ++ C IC+ N P++  +   CGH FC  CW
Sbjct: 155 EKL--FAECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLECGHKFCMQCW 212

Query: 474 RGYISTAINDGPGCLMLRCP 533
             Y++T I +      + CP
Sbjct: 213 SEYLTTKIMEEGMGQTISCP 232

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>ARI1_MOUSE (Q9Z1K5) Protein ariadne-1 homolog (ARI-1) (Ubiquitin-conjugating|
           enzyme E2-binding protein 1) (UbcH7-binding protein)
           (UbcM4-interacting protein 77)
          Length = 555

 Score = 54.7 bits (130), Expect = 2e-07
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 13/140 (9%)
 Frame = +3

Query: 153 QQQNYCILSEAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEERV 332
           +   Y +L+   I Q   + I  V+ V+    +    LL  +NW   K+ + +F  +  +
Sbjct: 95  EDYRYEVLTAEQILQHMVECIREVNEVIQNPATITRILLSHFNWDKEKLMERYF--DGNL 152

Query: 333 RKVVGFPEKRIEMPNDR-------------ELACGICFENCPHASMSAAACGHPFCSVCW 473
            K+  F E  +  P+ +             ++ C IC+ N P++  +   CGH FC  CW
Sbjct: 153 EKL--FAECHVINPSKKSRTRQMNTRSSAQDMPCQICYLNYPNSYFTGLECGHKFCMQCW 210

Query: 474 RGYISTAINDGPGCLMLRCP 533
             Y++T I +      + CP
Sbjct: 211 SEYLTTKIMEEGMGQTISCP 230

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>ARI2_MOUSE (Q9Z1K6) Protein ariadne-2 homolog (ARI-2) (Triad1 protein)|
           (UbcM4-interacting protein 48)
          Length = 492

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
 Frame = +3

Query: 207 DDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEERV---RKVVGFPEKRIEMPN 377
           + +  +++VL +S S A  +L +++W VS++ D +  +  ++    +V   P K +   +
Sbjct: 74  EHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYRSNSAQLLVEARVQPNPSKHVPTAH 133

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPG----CLMLRCP 533
                C +C +     ++ + AC H FC  CW  + S  + DG G    C+   CP
Sbjct: 134 PPH-HCAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKDGVGVGISCMAQDCP 188

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>ARI2_HUMAN (O95376) Protein ariadne-2 homolog (ARI-2) (Triad1 protein)|
          Length = 493

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 7/116 (6%)
 Frame = +3

Query: 207 DDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEERV---RKVVGFPEKRIEMPN 377
           + +  +++VL +S S A  +L +++W VS++ D +  +  ++    +V   P K +   +
Sbjct: 75  EHMTSLASVLKVSHSVAKLILVNFHWQVSEILDRYKSNSAQLLVEARVQPNPSKHVPTSH 134

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPG----CLMLRCP 533
                C +C +     ++ + AC H FC  CW  + S  + DG G    C+   CP
Sbjct: 135 PPH-HCAVCMQFVRKENLLSLACQHQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCP 189

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>YKZ7_YEAST (P36113) RING finger protein YKR017C|
          Length = 551

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
 Frame = +3

Query: 162 NYCILSEAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEERVRKV 341
           +Y  L+  GI +R    ++ +  + +I  ++   LL+ Y+W+  ++ + W    + +   
Sbjct: 90  SYECLTTKGIFERMLQRVDHLQPIFAIPSADILILLQHYDWNEERLLEVWTEKMDELLVE 149

Query: 342 VGFPE--------------KRIEMPNDRELACGICFENCPHASMSAAACGHPFCSVCWRG 479
           +G                 + +E  ND    C IC +        A  CGH +C  C+R 
Sbjct: 150 LGLSTTANIKKDNDYNSHFREVEFKND--FTCIICCDK-KDTETFALECGHEYCINCYRH 206

Query: 480 YISTAINDG 506
           YI   +++G
Sbjct: 207 YIKDKLHEG 215

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>ARI2_CAEEL (Q22431) Probable protein ariadne-2 (Ari-2)|
          Length = 482

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 31/131 (23%), Positives = 66/131 (50%), Gaps = 13/131 (9%)
 Frame = +3

Query: 153 QQQNYCILSEAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEER- 329
           ++ +Y  LS   +++   D +N + + +SI++  A  LL++ +W V K+     V  +R 
Sbjct: 42  EEADYECLSVNQVERVFIDGVNSLVSRISINEKFARILLQANHWDVDKIAR--LVRNDRN 99

Query: 330 --VRK--VVGFPEKRIEMPNDRELA----CGIC----FENCPHASMSAAACGHPFCSVCW 473
             +RK  +   PE + ++ + + +     C +C    +   PH +     CGH FC  CW
Sbjct: 100 DFLRKCHIDAKPEPKRKLSSTQSVLAKGYCSVCAMDGYTELPHLT-----CGHCFCEHCW 154

Query: 474 RGYISTAINDG 506
           + ++ + +++G
Sbjct: 155 KSHVESRLSEG 165

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>PARC_MOUSE (Q80TT8) p53-associated parkin-like cytoplasmic protein|
          Length = 1865

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 1/109 (0%)
 Frame = +3

Query: 174  LSEAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEERVRKVVGFP 353
            +S   ++   E  + +V   L++    A  LL   +W   ++   +  D E +    G  
Sbjct: 1336 MSPQEVEGLMEQTVRQVQETLNLEPDVAQHLLAHSHWGTEQLLQSYSDDPEPLLLAAGLR 1395

Query: 354  EKRIEMPNDRELACGICFENC-PHASMSAAACGHPFCSVCWRGYISTAI 497
              + ++   R   C +C     PH    +  C H  C  CW  Y++T I
Sbjct: 1396 VPQAQVVPTRPDQCPVCVTPLGPHDDSPSLCCLHCCCKSCWNEYLTTRI 1444

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>ARI2_DROME (O76924) Protein ariadne-2 (Ari-2)|
          Length = 509

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 33/156 (21%), Positives = 54/156 (34%), Gaps = 34/156 (21%)
 Frame = +3

Query: 165 YCILSEAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEERVRKVV 344
           Y  L+   I++   + + +++T+L I+ S A  LL  + W+   V +++  D   +    
Sbjct: 47  YECLTVEDIEKLLNERVEKLNTILQITPSLAKVLLLEHQWNNVAVVEKYRQDANALLVTA 106

Query: 345 ------------------------------GFPEKRIEMPNDRELACGICFENCPHASMS 434
                                         G+       P  R   C +C  +       
Sbjct: 107 RIKPPSVAVTDTASTSAAAASAQLLRLGSSGYKTTASATPQYRSQMCPVCASSQLGDKFY 166

Query: 435 AAACGHPFCSVCWRGYISTAINDG----PGCLMLRC 530
           + ACGH FC  CW  Y  T I  G     GC+   C
Sbjct: 167 SLACGHSFCKDCWTIYFETQIFQGISTQIGCMAQMC 202

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>RNF14_HUMAN (Q9UBS8) RING finger protein 14 (Androgen receptor-associated|
           protein 54) (Triad2 protein) (HFB30)
          Length = 474

 Score = 36.2 bits (82), Expect = 0.059
 Identities = 27/93 (29%), Positives = 34/93 (36%), Gaps = 12/93 (12%)
 Frame = +3

Query: 291 SKVHDEWFVDEERVRKVVGFPE-----------KRIEMPNDRELACGICF-ENCPHASMS 434
           S V  E  VDE  V+ V                ++I+  N +   C ICF E      M 
Sbjct: 175 SDVDQEEIVDERAVQDVESLSNLIQEILDFDQAQQIKCFNSKLFLCSICFCEKLGSECMY 234

Query: 435 AAACGHPFCSVCWRGYISTAINDGPGCLMLRCP 533
              C H +C  C + Y    I DG     L CP
Sbjct: 235 FLECRHVYCKACLKDYFEIQIRDGQ-VQCLNCP 266

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>CHFR_HUMAN (Q96EP1) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint|
           with forkhead and RING finger domains protein)
          Length = 664

 Score = 35.8 bits (81), Expect = 0.076
 Identities = 23/70 (32%), Positives = 32/70 (45%)
 Frame = +3

Query: 324 ERVRKVVGFPEKRIEMPNDRELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAIND 503
           E VR   G P+K  E      L C IC ++  H  +S   C H FC+ C+ G++  +   
Sbjct: 286 EDVRAAAGKPDKMEET-----LTCIIC-QDLLHDCVSLQPCMHTFCAACYSGWMERS--- 336

Query: 504 GPGCLMLRCP 533
              C   RCP
Sbjct: 337 -SLCPTCRCP 345

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>RAD5_YEAST (P32849) DNA repair protein RAD5 (EC 3.6.1.-) (Radiation sensitivity|
            protein 5) (Revertibility protein 2)
          Length = 1169

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
 Frame = +3

Query: 147  LRQQQNYCILSEAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEE 326
            LR +Q  C     G +   ++D+++ + +++    E  +L+R     VS+  D  F  EE
Sbjct: 836  LRLRQVCCHPGLIGSQDENDEDLSKNNKLVTEQTVELDSLMRV----VSERFDNSFSKEE 891

Query: 327  RVRKVVGFPEKRIEMPNDRELACGICFENCPHASMSA-AACGHPFCSVCWRGYISTAIND 503
                +     K  +  + + L C IC         +    CGH FC  C   YI    + 
Sbjct: 892  LDAMIQRLKVKYPDNKSFQSLECSICTTEPMDLDKALFTECGHSFCEKCLFEYIEFQNSK 951

Query: 504  GPGCLMLRCP 533
              G   L+CP
Sbjct: 952  NLG---LKCP 958

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>AKIB1_MOUSE (Q6ZPS6) Ankyrin repeat and IBR domain-containing protein 1|
           (Fragment)
          Length = 1087

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 38/162 (23%)
 Frame = +3

Query: 135 ELLSLRQQQNYCILSEAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWF 314
           E  +L +++ Y  L    +++ ++  I   + +L      A ALLR+++W   K+ + W 
Sbjct: 218 EYAALDKREPYEGLRPQDLRRLKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWM 277

Query: 315 VDEER-------------------------------VRKVVGFPEKRIEMPNDRELA-CG 398
            + E                                 R  V  P++    P D + + C 
Sbjct: 278 SNPENCCQRSGVQMPTPPPSGYNAWDTLPSPRTPRTTRSSVTSPDEISLSPGDLDTSLCD 337

Query: 399 ICFENCPHASMSA------AACGHPFCSVCWRGYISTAINDG 506
           IC       S+S         CGH FC  CW  +++  I +G
Sbjct: 338 ICM-----CSISVFEDPVDMPCGHDFCRGCWEAFLNLKIQEG 374

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>RNF14_MOUSE (Q9JI90) RING finger protein 14 (Androgen receptor-associated|
           protein 54) (Triad2 protein)
          Length = 485

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 33/133 (24%), Positives = 49/133 (36%), Gaps = 12/133 (9%)
 Frame = +3

Query: 171 ILSEAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEERVRKVVGF 350
           I+S   +K   +  + R +T  + S +E    L     + + V  E  VDE  V+ V   
Sbjct: 140 IVSPFELKMGSQKKVQRRATAQASSSTE----LGVGGAAAADVDQEETVDERAVQDVESL 195

Query: 351 PE-----------KRIEMPNDRELACGICF-ENCPHASMSAAACGHPFCSVCWRGYISTA 494
                        ++ +  N +   C ICF E      M    C H +C  C + Y    
Sbjct: 196 SSLIQEILDFNQARQTKCFNSKLFLCSICFCEKLGSDCMYFLECKHVYCKACLKDYFEIQ 255

Query: 495 INDGPGCLMLRCP 533
           I DG     L CP
Sbjct: 256 IKDGQ-VKCLNCP 267

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>PARC_HUMAN (Q8IWT3) p53-associated parkin-like cytoplasmic protein|
            (UbcH7-associated protein 1)
          Length = 2517

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 2/121 (1%)
 Frame = +3

Query: 174  LSEAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEERVRKVVGFP 353
            +S   ++   +  + +V   L++    A  LL   +W   ++   +  D E +    G  
Sbjct: 1997 MSPQEVEGLMKQTVRQVQETLNLEPDVAQHLLAHSHWGAEQLLQSYSEDPEPLLLAAGLC 2056

Query: 354  EKRIEMPNDRELACGICFE--NCPHASMSAAACGHPFCSVCWRGYISTAINDGPGCLMLR 527
              + +    R   C +C     C    + +  C H  C  CW  Y++T I      L+L 
Sbjct: 2057 VHQAQAVPVRPDHCPVCVSPLGCDD-DLPSLCCMHYCCKSCWNEYLTTRIEQN---LVLN 2112

Query: 528  C 530
            C
Sbjct: 2113 C 2113

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>AKIB1_HUMAN (Q9P2G1) Ankyrin repeat and IBR domain-containing protein 1|
           (Fragment)
          Length = 1214

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 38/162 (23%)
 Frame = +3

Query: 135 ELLSLRQQQNYCILSEAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWF 314
           E  +L +++ Y  L    +++ ++  I   + +L      A ALLR+++W   K+ + W 
Sbjct: 340 EYAALDKREPYEGLRPQDLRRLKDMLIVETADMLQAPLFTAEALLRAHDWDREKLLEAWM 399

Query: 315 VDEER-------------------------------VRKVVGFPEKRIEMPNDRELA-CG 398
            + E                                 R  V  P++    P D + + C 
Sbjct: 400 SNPENCCQRSGVQMPTPPPSGYNAWDTLPSPRTPRTTRSSVTSPDEISLSPGDLDTSLCD 459

Query: 399 ICFENCPHASMSA------AACGHPFCSVCWRGYISTAINDG 506
           IC       S+S         CGH FC  CW  +++  I +G
Sbjct: 460 ICM-----CSISVFEDPVDMPCGHDFCRGCWESFLNLKIQEG 496

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>RAD18_HUMAN (Q9NS91) Postreplication repair protein RAD18 (hRAD18) (hHR18)|
           (RING finger protein 73)
          Length = 495

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVCWRGYIS 488
           D  L CGICFE   + +M    C H +CS+C R ++S
Sbjct: 20  DDLLRCGICFEYF-NIAMIIPQCSHNYCSLCIRKFLS 55

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>ZFP95_MOUSE (Q9Z1D8) Zinc finger protein 95 (Zfp-95)|
          Length = 819

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 26/109 (23%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
 Frame = -3

Query: 483 CNLSSIHYRKDVHMRQHSLMHEGNFQNKFHMPVLCHLAFQCASPENQQPCEHVLHQRTIH 304
           C      Y + VH+ QH  +H G      H   LC  AF+  S        H++  +++H
Sbjct: 570 CEECGKSYNQRVHLIQHHRVHTGEKPYACH---LCGKAFRVRS--------HLVQHQSVH 618

Query: 303 HAPY*HSSYSC-----EEEHMLPTLKLKEQLKPYLCHPLGAALYQLHSI 172
                     C        H+   L+L  + K + CH  G   +Q  S+
Sbjct: 619 SRERPFKCNECGKGFGRRSHLAGHLRLHSRDKSHQCHECGEIFFQYVSL 667

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>RAD18_CANGA (Q6FPI4) Postreplication repair ubiquitin-protein ligase E3 RAD18|
           (EC 6.-.-.-)
          Length = 411

 Score = 34.3 bits (77), Expect = 0.22
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVCWRGYIS 488
           D  L C IC +   +  ++   CGH FCS+C RGY+S
Sbjct: 22  DDLLRCHICKDFLKNPVLTP--CGHTFCSLCIRGYLS 56

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>RHP16_SCHPO (P79051) DNA repair protein rhp16 (RAD16 homolog)|
          Length = 861

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = +3

Query: 339 VVGFPEKRIEMPNDRELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGCL 518
           V+    K +++ N   + C IC E    A  S   C H FC +C   YI+ A  DG    
Sbjct: 591 VLASKRKTVDIENQENIVCKICDEVAQDAIESR--CHHTFCRLCVTEYINAA-GDGEN-- 645

Query: 519 MLRCP 533
            + CP
Sbjct: 646 -VNCP 649

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>RAD18_YARLI (Q6CHI1) Postreplication repair ubiquitin-protein ligase E3 RAD18|
           (EC 6.-.-.-)
          Length = 344

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGCL 518
           D  L C IC E     +     CGH FCS+C + Y++      P C+
Sbjct: 23  DETLRCHICKEF--FTAPMITGCGHTFCSLCIQRYLTNTSQRCPTCM 67

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>ZN287_HUMAN (Q9HBT7) Zinc finger protein 287|
          Length = 754

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 5/105 (4%)
 Frame = -3

Query: 483 CNLSSIHYRKDVHMRQHSLMHEGNFQNKFHMPVLCHLAFQCASPENQQPCEHVLHQRTIH 304
           CN+    YR+  ++ QH  +H G    K +    C  AF  +S  NQ       HQRT H
Sbjct: 643 CNICGKAYRQGANLTQHQRIHTGEKPYKCNE---CGKAFIYSSSLNQ-------HQRT-H 691

Query: 303 HAPY*HSSYSCEEEHMLPTLKLKEQL-----KPYLCHPLGAALYQ 184
                +    C+++    T  ++ Q      KPY C   G    Q
Sbjct: 692 TGERPYKCNECDKDFSQRTCLIQHQRIHTGEKPYACRICGKTFTQ 736

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>TRI40_HUMAN (Q6P9F5) Tripartite motif 40 protein (RING finger protein 35)|
          Length = 258

 Score = 33.9 bits (76), Expect = 0.29
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = +3

Query: 363 IEMPNDRELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGCLMLRC 530
           ++  N  E  C IC E+   A   +  CGH FC VC   ++  A   G  C    C
Sbjct: 4   LQKDNQEEGVCPICQESLKEAV--STNCGHLFCRVCLTQHVEKASASGVFCCCPLC 57

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>TRI40_PANTR (Q1XHT8) Tripartite motif 40 protein|
          Length = 229

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +3

Query: 363 IEMPNDRELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGCLML 524
           ++  N  E  C IC E+   A   +  CGH FC VC   ++  A   G  C  L
Sbjct: 4   LQKDNQEEGVCPICQESLKEAV--STNCGHLFCRVCLTQHVEKASASGVFCCPL 55

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>TRAF4_HUMAN (Q9BUZ4) TNF receptor-associated factor 4 (Cysteine-rich domain|
           associated with RING and Traf domains protein 1)
           (Malignant 62) (RING finger protein 83)
          Length = 470

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +3

Query: 345 GFPEKRIEMPNDRELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAI 497
           GF  K +E P  R L C +C +      +  + CGH FC  C + ++S  +
Sbjct: 3   GFDYKFLEKPK-RRLLCPLCGKPM-REPVQVSTCGHRFCDTCLQEFLSEGV 51

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>RAD18_MOUSE (Q9QXK2) Postreplication repair protein RAD18 (mRAD18Sc)|
          Length = 509

 Score = 33.1 bits (74), Expect = 0.50
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVCWRGYIS 488
           D  L CGICFE   + ++    C H +CS+C R ++S
Sbjct: 20  DDLLRCGICFEYF-NIAVIIPQCSHNYCSLCIRKFLS 55

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>Y1303_METJA (Q58699) Hypothetical polyferredoxin-like protein MJ1303|
          Length = 501

 Score = 32.7 bits (73), Expect = 0.65
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 336 KVVGFPEKRIEMPNDRELACGICFENCPHASMSAAACGHPFCS--VCWR 476
           KV+   E +   P    + CG+C E+CP  ++     GH + S  VCW+
Sbjct: 250 KVIKVKEDKTSQPTSYCINCGLCAEHCPSGALRFEN-GHLYYSPDVCWK 297

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>RAD5_ASHGO (Q753V5) DNA repair protein RAD5 (EC 3.6.1.-)|
          Length = 1085

 Score = 32.7 bits (73), Expect = 0.65
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 2/52 (3%)
 Frame = +3

Query: 381 RELACGICFENC--PHASMSAAACGHPFCSVCWRGYISTAINDGPGCLMLRC 530
           ++L C IC      P  S+    CGHPFC  C   YI      G   +   C
Sbjct: 828 KDLECSICTCEAISPLTSVVFTRCGHPFCESCLLEYIQFQNKKGSETICPNC 879

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>BRE1_KLULA (Q6CWM4) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 663

 Score = 32.7 bits (73), Expect = 0.65
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = +3

Query: 366 EMPNDRELA-CGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGC 515
           E+ N R +  C +C +N  + ++    CGH FC VC +  ++  +   P C
Sbjct: 601 ELENFRTIIYCSLCSKNWKNTALKT--CGHVFCDVCCKERLAARMRKCPTC 649

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>PEX10_SCHPO (Q9UUF0) Peroxisome assembly protein 10 (Peroxin-10) (Peroxisome|
           biogenesis factor 10)
          Length = 306

 Score = 32.7 bits (73), Expect = 0.65
 Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
 Frame = +3

Query: 186 GIKQRQEDDIN-----RVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEERVRKVVGF 350
           G+K    D+IN     +V T+L +  S   A +  ++ S    H    + +ER  +    
Sbjct: 186 GLKYISLDEINPEEKKKVLTLLLLLGSRLIASILQHSNSYFDQHTISSITDERDLE---- 241

Query: 351 PEKRIEMPNDRELACGICFE--NCPHASMSAAACGHPFCSVCWRGYIS 488
            + ++    +    C +C E  +CP    +A  CGH FC  C  G+ S
Sbjct: 242 DKNKLPFIPEGNRKCSLCMEFIHCP----AATECGHIFCWSCINGWTS 285

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>ZNF7_HUMAN (P17097) Zinc finger protein 7 (Zinc finger protein KOX4) (Zinc|
           finger protein HF.16)
          Length = 686

 Score = 32.3 bits (72), Expect = 0.85
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
 Frame = -3

Query: 483 CNLSSIHYRKDVHMRQHSLMHEGNFQNKFHMPVLCHLAFQCASPENQQPCEHVLHQRTIH 304
           C+     +R    + QH L+H G    K +    C  AF C+S         + HQRT  
Sbjct: 415 CDECGKAFRWISRLSQHQLIHTGEKPYKCNK---CTKAFGCSS-------RLIRHQRT-- 462

Query: 303 HAPY*HSSYSCEE--------EHMLPTLKLKEQLKPYLCHPLGAALYQLHSI 172
           H       + C+E         H++   ++    KPY+C+  G A  Q  S+
Sbjct: 463 HTG--EKPFKCDECGKGFVQGSHLIQHQRIHTGEKPYVCNDCGKAFSQSSSL 512

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>ZFP95_HUMAN (Q9Y2L8) Zinc finger protein 95 homolog (Zfp-95)|
          Length = 839

 Score = 32.3 bits (72), Expect = 0.85
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
 Frame = -3

Query: 483 CNLSSIHYRKDVHMRQHSLMHEGNFQNKFHMPVLCHLAFQCASPENQQPCEHVLHQRTIH 304
           C      Y + VH+ QH  +H G    K +   LC  AF+  S        H++  +++H
Sbjct: 579 CEECGKSYNQRVHLTQHQRVHTG---EKPYTCPLCGKAFRVRS--------HLVQHQSVH 627

Query: 303 HAPY*HSSYSC-----EEEHMLPTLKLKEQLKPYLCHPLGAALYQLHSI 172
                     C        H+   L+L  + K + C   G   +Q  S+
Sbjct: 628 SGERPFKCNECGKGFGRRSHLAGHLRLHSREKSHQCRECGEIFFQYVSL 676

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>ZFP46_MOUSE (Q03309) Zinc finger protein 46 (Zfp-46) (Zinc finger protein|
           MLZ-4)
          Length = 393

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 24/116 (20%), Positives = 38/116 (32%), Gaps = 8/116 (6%)
 Frame = -3

Query: 483 CNLSSIHYRKDVHMRQHSLMHEGNFQNKFHMPVLCHLAFQCASPENQQPCEHVLHQRTIH 304
           CN     + +  H+ QH  +H G            H   +CA      P  H++  +  H
Sbjct: 119 CNECGKSFGRSSHLIQHQTIHTGEKP---------HKCTECAKASAASP--HLIQHQRTH 167

Query: 303 HAPY*HSSYSCEE--------EHMLPTLKLKEQLKPYLCHPLGAALYQLHSICSNF 160
                   Y CEE         H+    +     KPY CH  G    +   +  ++
Sbjct: 168 SG---EKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECHECGRGFSERSDLIKHY 220

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>DZIP3_MOUSE (Q7TPV2) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-) (DAZ-interacting|
            protein 3 homolog)
          Length = 1204

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 354  EKRIEMPNDRELACGICFENCPHASMSAAACGHPFCSVCWRGYI 485
            +K ++   + E  C IC EN    ++S   C H F S C R ++
Sbjct: 1131 DKDMDNEEEEEEPCVICHENLSPENLSVLPCAHKFHSQCIRPWL 1174

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>COP1_ARATH (P43254) Ubiquitin-protein ligase COP1 (EC 6.3.2.-) (Constitutive|
           photomorphogenesis protein 1)
          Length = 675

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVC 470
           D++L C IC +    A ++A  CGH FC +C
Sbjct: 47  DKDLLCPICMQIIKDAFLTA--CGHSFCYMC 75

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>BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (Brefeldin|
           A-sensitivity protein 1)
          Length = 700

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 366 EMPNDRELA-CGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGC 515
           E+ N R L  C +C +N  +  M+   CGH FC  C +  ++  +   P C
Sbjct: 638 ELANFRTLVYCSLCSKNWKN--MAIKTCGHVFCENCCKERLAARMRKCPTC 686

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>SYWM_CAEEL (P46579) Probable tryptophanyl-tRNA synthetase, mitochondrial (EC|
           6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS)
          Length = 650

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 10/84 (11%)
 Frame = +3

Query: 312 FVDEERVRKVVGFPEKRIEMPNDREL----------ACGICFENCPHASMSAAACGHPFC 461
           F+++E+    +   +K     +DR L           C IC EN    + SA  CGH FC
Sbjct: 218 FLEQEKFNNKLKKEKKENNGGSDRNLDENSLFHPTFQCSICLEN---KNPSALFCGHLFC 274

Query: 462 SVCWRGYISTAINDGPGCLMLRCP 533
             C + + + A          RCP
Sbjct: 275 WTCIQEH-AVAATSSASTSSARCP 297

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>CHFR_MOUSE (Q810L3) Ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint|
           with forkhead and RING finger domains protein)
          Length = 664

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGCLMLRCP 533
           +  L C IC ++  H  +S   C H FC+ C+ G++  +      C   RCP
Sbjct: 298 EETLTCIIC-QDLLHDCVSLQPCMHTFCAACYSGWMERS----SLCPTCRCP 344

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>ZN454_HUMAN (Q8N9F8) Zinc finger protein 454|
          Length = 522

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
 Frame = -3

Query: 483 CNLSSIHYRKDVHMRQHSLMHEGNFQNKFHMPVLCHLAFQCASPENQQPCEHVLHQRTIH 304
           CNL    + +++H+  H  +H G    K +   +C  AF C +        H+   + IH
Sbjct: 274 CNLCGKAFIRNIHLAHHHRIHTGEKPFKCN---ICEKAFVCRA--------HLTKHQNIH 322

Query: 303 HAPY*HSSYSCEEEHMLPTLKLKEQL-----KPYLCHPLGAA 193
                +    C +     T  L+ Q      KP+ C+  G A
Sbjct: 323 SGEKPYKCNECGKAFNQSTSFLQHQRIHTGEKPFECNECGKA 364

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>BRE1_CANGA (Q6FWF3) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 693

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +3

Query: 366 EMPNDRELA-CGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGC 515
           E+ N R L  C +C +N  +  M+   CGH FC  C +  ++  +   P C
Sbjct: 631 ELENFRTLVYCSLCSKNWKN--MAIRTCGHVFCEDCCKERLAARMRKCPTC 679

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>VT2_MYXVL (P29825) Tumor necrosis factor soluble receptor precursor (Protein|
           T2)
          Length = 326

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +3

Query: 396 GICFENCPHASMSAAACG---HPFCSVCWRGYISTAINDGPGCLMLR 527
           G+C  +CP  S ++  CG      CS C     + + N  P C+  R
Sbjct: 37  GLCCTSCPPGSYASRLCGPGSDTVCSPCKNETFTASTNHAPACVSCR 83

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>IE61_VZVD (P09309) Transcriptional repressor IE61 (Immediate-early protein|
           61) (IE61)
          Length = 467

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = +3

Query: 393 CGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGCLMLRCP 533
           C IC         +   C H FC VC R + ST++     C + RCP
Sbjct: 19  CTICMSTVSDLGKTMP-CLHDFCFVCIRAWTSTSVQ----CPLCRCP 60

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>BRE1_CANAL (Q5A4X0) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 681

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 393 CGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGC 515
           C +C +N    +++   CGH FCS C +  ++  +   P C
Sbjct: 629 CSVCSKNWKDTAITV--CGHVFCSKCTQERLAARLRRCPSC 667

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>YB1B_SCHPO (P87176) Hypothetical RING finger protein C3D6.11c in chromosome II|
          Length = 269

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +3

Query: 351 PEKRIEMPNDRELA---CGICFENCPHASMSAAACGHPFCSVC 470
           P K+  +P+ + LA   C IC ++    ++S   CGH FC+ C
Sbjct: 189 PSKKQVVPSSQRLADYKCVICLDS--PENLSCTPCGHIFCNFC 229

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>TRI25_HUMAN (Q14258) Tripartite motif protein 25 (Zinc finger protein 147)|
           (Estrogen-responsive finger protein) (Efp) (RING finger
           protein 147)
          Length = 630

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +3

Query: 372 PNDRELACGICFENCPHASMSAAACGHPFCSVC 470
           P   EL+C IC E  P        CGH FC  C
Sbjct: 6   PLAEELSCSICLE--PFKEPVTTPCGHNFCGSC 36

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>MYH14_MOUSE (Q6URW6) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle|
            myosin heavy chain IIc) (NMHC II-C)
          Length = 2000

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
 Frame = +3

Query: 177  SEAGIK-QRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHD--EWFVDEERVRKVVG 347
            SEA  K QR + ++  VST LS ++S+A  L +  + + S++HD  E   +E R +  +G
Sbjct: 1297 SEAAEKLQRAQAELESVSTALSEAESKAIRLGKELSSAESQLHDTQELLQEETRAKLALG 1356

Query: 348  FPEKRIE 368
               + +E
Sbjct: 1357 SRVRALE 1363

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>RAD18_SCHPO (O74747) Postreplication repair ubiquitin-protein ligase E3 rad18|
           (EC 6.-.-.-) (RAD18 homolog)
          Length = 387

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGCLMLRCP 533
           D  L C IC E     +    +C H FCS C R Y    + + P C   R P
Sbjct: 24  DSSLRCLICHEY--FRAPLITSCSHTFCSFCIRDY----LREHPMCPACRAP 69

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>FANCL_MOUSE (Q9CR14) Ubiquitin ligase protein FANCL (EC 6.3.2.-) (Fanconi|
           anemia group L protein homolog) (Proliferation of germ
           cells protein)
          Length = 375

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 8/59 (13%)
 Frame = +3

Query: 342 VGFPEKRIEMPNDRELACGICFEN-----CPHASMSAAACGHPFCSVC---WRGYISTA 494
           + FP + I   +D  + CGIC+        P    +   CG PF  +C   W   +ST+
Sbjct: 290 IDFPARSILEESDFSMDCGICYARHLNGAIPDQVCNNPQCGQPFHEICLYEWLRGLSTS 348

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>RAD5_KLULA (Q6CJM4) DNA repair protein RAD5 (EC 3.6.1.-)|
          Length = 1114

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
 Frame = +3

Query: 393 CGICFENC--PHASMSAAACGHPFCSVCWRGYISTAINDGPGCLMLRCP 533
           C IC   C  P +++S   C H FC  C   YI    N     L + CP
Sbjct: 858 CAICTTECIEPLSAVSITECLHTFCEPCLAEYIEFQQNKK---LSINCP 903

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>TRIM3_RAT (O70277) Tripartite motif protein 3 (RING finger protein 22)|
           (Brain-expressed RING finger protein)
          Length = 744

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
 Frame = +3

Query: 372 PNDRE-LACGICFEN--CPHASMSAAACGHPFCSVCWRGYISTAINDGPGCLMLRCP 533
           P D++ L C IC +   CP        C H FC  C + YI       P  L L CP
Sbjct: 14  PMDKQFLVCSICLDRYRCP----KVLPCLHTFCERCLQNYIP------PQSLTLSCP 60

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>TRIM3_MOUSE (Q9R1R2) Tripartite motif protein 3 (RING finger protein 22) (RING|
           finger protein HAC1)
          Length = 744

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
 Frame = +3

Query: 372 PNDRE-LACGICFEN--CPHASMSAAACGHPFCSVCWRGYISTAINDGPGCLMLRCP 533
           P D++ L C IC +   CP        C H FC  C + YI       P  L L CP
Sbjct: 14  PMDKQFLVCSICLDRYRCP----KVLPCLHTFCERCLQNYIP------PQSLTLSCP 60

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>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18|
           (EC 6.-.-.-)
          Length = 427

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVCWRGYI 485
           D  L C IC +    + ++   CGH FCS+C R Y+
Sbjct: 27  DSLLRCHICKDFLKASVLTP--CGHSFCSICIRKYL 60

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>RAD18_YEAST (P10862) Postreplication repair ubiquitin-protein ligase E3 RAD18|
           (EC 6.-.-.-) (Radiation sensitivity protein 18)
          Length = 487

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGC 515
           D  L C IC +      ++   CGH FCS+C    I T +N+ P C
Sbjct: 23  DTLLRCHICKDFLKVPVLTP--CGHTFCSLC----IRTHLNNQPNC 62

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>RNF8_MOUSE (Q8VC56) Ubiquitin ligase protein RNF8 (EC 6.3.2.-) (RING finger|
           protein 8) (AIP37) (ActA-interacting protein 37)
           (LaXp180)
          Length = 488

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 27/111 (24%), Positives = 47/111 (42%)
 Frame = +3

Query: 138 LLSLRQQQNYCILSEAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFV 317
           L  L ++Q  C L +  ++  QE     +   L+ SK +   ++++ N  + +  +E   
Sbjct: 327 LQGLEKEQGECDLKQQLVQALQEHQA--LMEELNCSKKDFEKIIQAKNKELEQTKEEKDK 384

Query: 318 DEERVRKVVGFPEKRIEMPNDRELACGICFENCPHASMSAAACGHPFCSVC 470
            + +  +V+      +E     EL C IC E    A      C H FCS C
Sbjct: 385 VQAQKEEVLSHMNDLLE----NELQCIICSEYFIEAV--TLNCAHSFCSFC 429

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>Y1226_ARATH (Q9LME2) Hypothetical protein At1g22260|
          Length = 871

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +3

Query: 222 VSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEERVRKVVGFPEKRIEMPNDRELACGI 401
           V T L  S +E    + + N  + KVH E    E+ V+ +V   EK  +     +L+   
Sbjct: 212 VITKLEASAAERKLNIENLNSQLEKVHLELTTKEDEVKDLVSIQEKLEKEKTSVQLSADN 271

Query: 402 CFE 410
           CFE
Sbjct: 272 CFE 274

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>YEU6_YEAST (P40072) Hypothetical 30.8 kDa protein in SPR6-RPL23B intergenic|
           region
          Length = 274

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
 Frame = +3

Query: 348 FPEKRIEMPND----RELACGICFENCPHASMSAAACGHPFCSVC 470
           F E+  E P +    ++  C ICFE  P  +     CGH FC  C
Sbjct: 187 FQEETKEAPKEYGAAKDYRCPICFE--PPETALMTLCGHVFCCPC 229

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>LIN13_CAEEL (Q11107) Zinc finger protein lin-13 (Abnormal cell lineage protein|
            13)
          Length = 2248

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
 Frame = -3

Query: 468  IHYRKDVHMRQHSLMHEGNF--QNKFHMPVLCHLAFQCASPENQQPCEHVLHQRTIHHAP 295
            +HY + VH++     H+ N    N FH+   C +   C SPE Q P     H RT H A 
Sbjct: 1973 LHYIQ-VHLKPAYDKHQSNSFKSNVFHLK--CPIR-SCTSPEFQSPKAFEKHMRTAHAAE 2028

Query: 294  Y*HSSYSCEEEHMLPTLKLK 235
                +  C+       L +K
Sbjct: 2029 LPFEASCCDARFASKALCVK 2048

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>APLP_DROME (Q9V496) Apolipophorins precursor (Retinoid- and fatty acid-binding|
            glycoprotein) [Contains: Apolipophorin-2 (Apolipophorin
            II) (ApoL2); Apolipophorin-1 (Apolipophorin I) (ApoL1)]
          Length = 3351

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +1

Query: 247  SRKHVLFFAAITGVLVRCMMNGSLMKNVFARLLVFRRSALKCQMTENWHVEFVLKI 414
            S  HV+ F +  G L     + +++ ++    L FR S L C + ENW V F  K+
Sbjct: 2723 SSDHVIDFQSWIGSLTHSFDSLAVLPSI----LSFRSSILNCLLNENWDVVFNKKL 2774

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>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch|
           protein 5)
          Length = 493

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = +3

Query: 384 ELACGICFENCPHASMSAAACGHPFC----SVCWRGYIS 488
           EL C +C++  P        CGH FC    S CW   +S
Sbjct: 18  ELLCAVCYD--PFRDAVTLRCGHNFCRGCVSRCWEVQVS 54

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>CWC24_SCHPO (Q9P6R8) Pre-mRNA-splicing factor cwc24 (Complexed with cdc5|
           protein 24) (Cell cycle control protein cwf24)
          Length = 533

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
 Frame = +3

Query: 306 EWFVDEERVRKVVGFPEKRI--EMPNDRELACGICFENCPHASMSAAACGHPFCSVC 470
           EW   +E+ +K     E  +  E   D    C IC ++  + S  A  CGH FC  C
Sbjct: 223 EWDSVQEKYKKGAKLEEGMVKNEKKEDIPFVCLICKKD--YRSPIATTCGHHFCEQC 277

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>ZN287_MOUSE (Q9EQB9) Zinc finger protein 287 (Zfp-287) (Zinc finger protein|
           SKAT-2)
          Length = 759

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
 Frame = -3

Query: 483 CNLSSIHYRKDVHMRQHSLMHEGNFQNKFHMPVLCHLAFQCASPENQQPCEHVLHQRTIH 304
           CN     YR+  ++ QH  +H G    K H    C  AF  +S  NQ       H+RT H
Sbjct: 648 CNTCGKAYRQGANLTQHQRVHTGERPYKCHH---CGKAFIYSSSLNQ-------HRRT-H 696

Query: 303 HAPY*HSSYSCEEEHMLPTLKLKEQL-----KPYLC 211
                +    C ++    T  ++ Q      KPY C
Sbjct: 697 TGERPYKCSHCNKDFSQRTCLIQHQRIHTGEKPYGC 732

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>FANCL_HUMAN (Q9NW38) Ubiquitin ligase protein FANCL (EC 6.3.2.-) (Fanconi|
           anemia group L protein) (Fanconi anemia-associated
           polypeptide of 43 kDa) (FAAP43)
          Length = 375

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
 Frame = +3

Query: 342 VGFPEKRIEMPNDRELACGICFE-----NCPHASMSAAACGHPFCSVC 470
           + FP + I   +D  + CGIC+        P      + CG PF  +C
Sbjct: 290 IDFPARAILEKSDFTMDCGICYAYQLDGTIPDQVCDNSQCGQPFHQIC 337

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>ZN347_HUMAN (Q96SE7) Zinc finger protein 347 (Zinc finger 1111)|
          Length = 839

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
 Frame = -3

Query: 462 YRKDVHMRQHSLMHEGNFQNKFHMPVLCHLAFQCASPENQQPCEHVLHQRTIHHAPY*HS 283
           +R++ H+ +H L+H G    K +    C  AF+  S        ++   + IH     + 
Sbjct: 466 FRRNSHLARHQLIHTGEKPYKCNE---CGKAFRAHS--------NLTTHQVIHTGEKPYK 514

Query: 282 SYSC-----EEEHMLPTLKLKEQLKPYLCHPLGAALYQLHSICSN 163
              C     +  H+    ++   +KPY+C+  G A     S+ ++
Sbjct: 515 CNECGKVFTQNSHLANHQRIHTGVKPYMCNECGKAFSVYSSLTTH 559

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>VT2_SFVKA (P25943) Tumor necrosis factor soluble receptor precursor (Protein|
           T2)
          Length = 325

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
 Frame = +3

Query: 396 GICFENCPHASMSAAACG---HPFCSVCWRGYISTAINDGPGCLMLRCP 533
           G+C  +C     ++  CG   +  CS C  G  + + N  P C+  R P
Sbjct: 37  GLCCASCHPGFYASRLCGPGSNTVCSPCEDGTFTASTNHAPACVSCRGP 85

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>LNX2_MOUSE (Q91XL2) Ligand of Numb-protein X 2 (Numb-binding protein 2)|
          Length = 687

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVCWRGYI 485
           D +L C IC +  P        CGH FC  C R ++
Sbjct: 46  DDDLVCHICLQ--PLLQPLDTPCGHTFCHKCLRNFL 79

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>COP1_PEA (P93471) Ubiquitin ligase protein COP1 (EC 6.3.2.-) (Constitutive|
           photomorphogenesis protein 1)
          Length = 672

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVC 470
           D++  C IC +    A ++A  CGH FC +C
Sbjct: 42  DKDFLCPICMQIIKDAFLTA--CGHSFCYMC 70

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>ETF2_MCV1 (Q98277) Early transcription factor 82 kDa subunit (VETF large|
           subunit)
          Length = 707

 Score = 30.0 bits (66), Expect = 4.2
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -3

Query: 270 EEEHMLPTLKLKEQLKPYLCHPLG 199
           E  H+L TLK+  QLK YLCH LG
Sbjct: 52  ERRHILLTLKIS-QLKGYLCHLLG 74

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>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18|
           (EC 6.-.-.-)
          Length = 443

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVCWRGYIS 488
           D  L C IC +      ++   CGH FCS+C R Y++
Sbjct: 27  DSLLRCHICKDMLQTPVLTQ--CGHTFCSLCIREYLN 61

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>LNX2_HUMAN (Q8N448) Ligand of Numb-protein X 2 (Numb-binding protein 2) (PDZ|
           domain-containing RING finger protein 1)
          Length = 690

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAACGHPFCSVCWRGYI 485
           D +L C IC +  P        CGH FC  C R ++
Sbjct: 45  DDDLVCHICLQ--PLLQPLDTPCGHTFCYKCLRNFL 78

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>NF7O_XENLA (Q91431) Nuclear factor 7, ovary (xNF7-O)|
          Length = 610

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
 Frame = +3

Query: 384 ELACGICFENCPHASMSAAACGHPFCSVC----WRGYISTA 494
           EL C +C E      M   ACGH FC  C    W G  S A
Sbjct: 143 ELTCPLCVELFKDPVM--VACGHNFCRSCIDKVWEGQSSFA 181

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>TRI35_MOUSE (Q8C006) Tripartite motif protein 35 (Macrophage-derived|
           apoptosis-inducing RBCC protein) (MAIR protein) (Nc8
           protein) (Hemopoeitic lineage switch protein 5)
          Length = 501

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 384 ELACGICFENCPHASMSAAACGHPFCSVCWRG 479
           EL C +C++  P        CGH FC  C  G
Sbjct: 18  ELLCAVCYD--PFRDAVTLRCGHNFCRRCVSG 47

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>ZN436_MOUSE (Q8BPP0) Zinc finger protein 436 (Zinc finger protein 46)|
          Length = 452

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 25/116 (21%), Positives = 39/116 (33%), Gaps = 8/116 (6%)
 Frame = -3

Query: 483 CNLSSIHYRKDVHMRQHSLMHEGNFQNKFHMPVLCHLAFQCASPENQQPCEHVLHQRTIH 304
           CN     + +  H+ QH  +H G    K H    C  +F   S        H++  +  H
Sbjct: 178 CNECGKSFGRSSHLIQHQTIHTG---EKPHKCTECGKSFCRLS--------HLIQHQRTH 226

Query: 303 HAPY*HSSYSCEE--------EHMLPTLKLKEQLKPYLCHPLGAALYQLHSICSNF 160
                   Y CEE         H+    +     KPY CH  G    +   +  ++
Sbjct: 227 SG---EKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECHECGRGFSERSDLIKHY 279

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>TRAF4_MOUSE (Q61382) TNF receptor-associated factor 4 (Cysteine-rich motif|
           associated to RING and Traf domains protein 1)
          Length = 470

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 348 FPEKRIEMPNDRELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAI 497
           FPEK       R L C +C +     S+  + CGH +C  C + ++S  +
Sbjct: 8   FPEKP-----KRRLLCPLCGKPM-RDSVEVSTCGHRYCDNCLQEFLSEGV 51

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>NF7B_XENLA (Q92021) Nuclear factor 7, brain (xNF7) (xNF7-B)|
          Length = 609

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
 Frame = +3

Query: 384 ELACGICFENCPHASMSAAACGHPFCSVC----WRGYISTA 494
           EL C +C E      M   ACGH FC  C    W G  S A
Sbjct: 142 ELTCPLCVELFKDPVM--VACGHNFCRSCIDKAWEGQSSFA 180

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>CWC24_KLULA (Q6CSS6) Pre-mRNA-splicing factor CWC24|
          Length = 229

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 19/69 (27%), Positives = 33/69 (47%)
 Frame = +3

Query: 294 KVHDEWFVDEERVRKVVGFPEKRIEMPNDRELACGICFENCPHASMSAAACGHPFCSVCW 473
           K++ +W VDE + ++V+   E   E+P      C +C +   + S     C H FCS C+
Sbjct: 145 KLNTDWKVDETQEKEVLKELE---EIP----FRCFLCKKE--YTSPVVTKCNHYFCSSCF 195

Query: 474 RGYISTAIN 500
              +  + N
Sbjct: 196 MKQMKVSTN 204

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>ZN167_HUMAN (Q9P0L1) Zinc finger protein 167 (Zinc finger protein 448) (ZFP)|
          Length = 754

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 30/112 (26%), Positives = 41/112 (36%), Gaps = 5/112 (4%)
 Frame = -3

Query: 483 CNLSSIHYRKDVHMRQHSLMHEGNFQNKFHMPVLCHLAFQCASPENQQPCEHVLHQRTIH 304
           C+     YR   H+ QH  +H G        P  C+   +CA    Q     + HQRT H
Sbjct: 441 CSECGKAYRHSSHLIQHQRLHNG------EKPYKCN---ECAKAFTQS-SRLIDHQRT-H 489

Query: 303 HAPY*HSSYSCEEEHMLPTLKLKEQL-----KPYLCHPLGAALYQLHSICSN 163
                +    C E  +      + Q+     KPY C+  G A       CSN
Sbjct: 490 TGEKPYECNECGEAFIRSKSLARHQVLHTGKKPYKCNECGRA------FCSN 535

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>POLG_PVYN (P18247) Genome polyprotein [Contains: P1 proteinase (N-terminal|
           protein); Helper component proteinase (EC 3.4.22.45)
           (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
           inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
           (6K2); Viral gen
          Length = 3063

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = -3

Query: 396 HMPVLCHLAFQCASPENQQPCEHVLHQRTI 307
           +M  +C  +F+C  P +   CEH++ +R +
Sbjct: 4   YMSTICFGSFECKLPYSPASCEHIVKEREV 33

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>BRE1_GIBZE (Q4I7N9) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 703

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 393 CGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGC 515
           C IC  N  + ++    CGH FC+ C    IS  +   P C
Sbjct: 651 CTICRNNFKNTALKT--CGHLFCNQCVDDRISNRMRKCPTC 689

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>BRE1_NEUCR (Q7S304) Ubiquitin-protein ligase bre-1 (EC 6.3.2.-)|
          Length = 707

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 8/114 (7%)
 Frame = +3

Query: 198 RQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFV--------DEERVRKVVGFP 353
           + +D   R     +I K +    L+     VS   D+W          +EE +R +V   
Sbjct: 597 KSKDTAGRELKEKAIDKEQEAEKLKVRLDKVSSERDKWKTKCQSNSTEEEEMLRNLV--- 653

Query: 354 EKRIEMPNDRELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGC 515
                        C +C  N  +  +    CGH FC+ C    ++  +   P C
Sbjct: 654 ------------LCSVCRSNFKNTILKG--CGHVFCNECVDNRLANRMRKCPSC 693

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>THIC_METJA (Q58432) Probable thiamine biosynthesis protein thiC|
          Length = 426

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 18/72 (25%), Positives = 36/72 (50%)
 Frame = +3

Query: 201 QEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEERVRKVVGFPEKRIEMPND 380
           Q  D+ + + +    ++E     ++++W   +   E  +D+E+ RK+      R E+P+ 
Sbjct: 353 QAADVAKGNKLAWEKETEMAYARKNHDW---EKQFELAIDKEKARKM------REEIPSK 403

Query: 381 RELACGICFENC 416
            E AC IC + C
Sbjct: 404 EEKACSICGDYC 415

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>Z705A_HUMAN (Q6ZN79) Zinc finger protein 705A|
          Length = 300

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 24/100 (24%), Positives = 29/100 (29%)
 Frame = -3

Query: 483 CNLSSIHYRKDVHMRQHSLMHEGNFQNKFHMPVLCHLAFQCASPENQQPCEHVLHQRTIH 304
           CNL    Y     +R+H + H G        P  CHL   C     Q  C H+      H
Sbjct: 174 CNLCEKAYTNCFRLRRHKMTHTGE------RPYACHL---CGKAFTQ--CSHLRRHEKTH 222

Query: 303 HAPY*HSSYSCEEEHMLPTLKLKEQLKPYLCHPLGAALYQ 184
                                     +PY CH  G A  Q
Sbjct: 223 TGE-----------------------RPYKCHQCGKAFIQ 239

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>RN146_PONPY (Q5REL3) RING finger protein 146|
          Length = 358

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 393 CGICFENCPHASMSAAACGHPFCSVCWRG 479
           C IC + C H    +  C H FC +C +G
Sbjct: 36  CAICLQTCVHPV--SLPCKHVFCYLCVKG 62

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>RN146_MOUSE (Q9CZW6) RING finger protein 146|
          Length = 359

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 393 CGICFENCPHASMSAAACGHPFCSVCWRG 479
           C IC + C H    +  C H FC +C +G
Sbjct: 38  CAICLQTCVHPV--SLPCKHVFCYLCVKG 64

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>RN146_HUMAN (Q9NTX7) RING finger protein 146 (Dactylidin)|
          Length = 359

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 393 CGICFENCPHASMSAAACGHPFCSVCWRG 479
           C IC + C H    +  C H FC +C +G
Sbjct: 37  CAICLQTCVHPV--SLPCKHVFCYLCVKG 63

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>NHAA_PSETH (Q7SID2) Cobalt-containing nitrile hydratase subunit alpha (EC|
           4.2.1.84) (L-nitrilase) (L-NHase)
          Length = 203

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 6/76 (7%)
 Frame = +3

Query: 180 EAGIKQRQEDDINRVSTVLSISKSEACALLRSYNWSVSKVHDEWFVDEERVRKVVGFPEK 359
           E GI   Q +D+  V     +     C L   Y W V  +   WF + +   +VV  P +
Sbjct: 81  ELGIGGLQGEDMMWVENTDEVHHVVVCTLCSCYPWPVLGLPPNWFKEPQYRSRVVREPRQ 140

Query: 360 RI------EMPNDREL 389
            +      E+P  +E+
Sbjct: 141 LLKEEFGFEVPPSKEI 156

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>BRE1_YARLI (Q6CF78) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 700

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +3

Query: 393 CGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGC 515
           C +C +N    ++    CGH FC  C +  +   +   P C
Sbjct: 648 CSLCSKNWKDTALKV--CGHVFCHQCAQDRLDARLRKCPNC 686

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>RFWD2_HUMAN (Q8NHY2) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)|
           (Ubiquitin-protein ligase COP1) (Constitutive
           photomorphogenesis protein 1 homolog) (hCOP1)
          Length = 731

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 384 ELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGC 515
           +  C ICF+    A M+   CGH FC  C    I  ++ D   C
Sbjct: 133 DFVCPICFDMIEEAYMTK--CGHSFCYKC----IHQSLEDNNRC 170

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>ZN300_HUMAN (Q96RE9) Zinc finger protein 300|
          Length = 604

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 4/97 (4%)
 Frame = -3

Query: 462 YRKDVHMRQHSLMHEGNFQNKFHMPVLCHLAFQCASPENQQPCEHVLHQRT-IHHAPY*H 286
           + +   +  H L+H G        P  C    +  S ++Q     ++HQRT     PY  
Sbjct: 446 FSRKTELITHQLVHTGE------KPYECTECGKTFSRKSQL----IIHQRTHTGEKPYKC 495

Query: 285 SSYS---CEEEHMLPTLKLKEQLKPYLCHPLGAALYQ 184
           S      C++ H++   ++    KPY+C   G A  Q
Sbjct: 496 SECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQ 532

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>ZIM10_HUMAN (Q9ULJ6) Retinoic acid-induced protein 17 (PIAS-like protein Zimp10)|
          Length = 1067

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
 Frame = -2

Query: 532  GHLNIRHPG--PSFIAVLM*PLQHTLQKGCPHAAALIDA*GQFSK--QIPHASSLSFGIS 365
            G   + HP   P+ +A L  PL H +Q+  PHA +         +   +PH SS S G  
Sbjct: 917  GPPQLSHPPDMPNNMAALEKPLSHPMQETMPHAGSSDQPHPSIQQGLHVPHPSSQS-GPP 975

Query: 364  MRFSGKP 344
            +  SG P
Sbjct: 976  LHHSGAP 982

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>UB7I4_MOUSE (Q925F3) Ubiquitin-conjugating enzyme 7-interacting protein 4|
           (UbcM4-interacting protein 4) (RING finger protein 144)
          Length = 292

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 378 DRELACGICFENCPHASMSAAA-CGHPFCSVCWRGYISTAINDG 506
           D  ++C +C    P   M+  A C   FC++C + Y+   I +G
Sbjct: 15  DPLVSCKLCLGEYPAEQMTTIAQCQCIFCTLCLKQYVELLIKEG 58

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>RN146_RAT (Q5XIK5) RING finger protein 146|
          Length = 352

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 393 CGICFENCPHASMSAAACGHPFCSVCWRG 479
           C IC + C H    +  C H FC +C +G
Sbjct: 36  CAICLQTCVHPV--SLPCKHVFCYLCVKG 62

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>DZIP3_HUMAN (Q86Y13) Ubiquitin ligase protein DZIP3 (EC 6.3.2.-) (DAZ-interacting|
            protein 3) (RNA-binding ubiquitin ligase of 138 kDa)
            (hRUL138)
          Length = 1208

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 378  DRELACGICFENCPHASMSAAACGHPFCSVCWRGYI 485
            + E  C IC EN    ++S   C H F + C R ++
Sbjct: 1143 EEEEPCVICHENLSPENLSVLPCAHKFHAQCIRPWL 1178

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>RFWD2_MOUSE (Q9R1A8) Ring finger and WD repeat domain protein 2 (EC 6.3.2.-)|
           (Ubiquitin-protein ligase COP1) (Constitutive
           photomorphogenesis protein 1 homolog) (mCOP1)
          Length = 733

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3

Query: 384 ELACGICFENCPHASMSAAACGHPFCSVCWRGYISTAINDGPGC 515
           +  C ICF+    A M+   CGH FC  C    I  ++ D   C
Sbjct: 135 DFVCPICFDMIEEAYMTK--CGHSFCYKC----IHQSLEDNNRC 172


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,908,015
Number of Sequences: 219361
Number of extensions: 1195785
Number of successful extensions: 3867
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 3645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3857
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result