ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal40m06 |
|---|---|
| Clone Library Name | barley_pub |
>ATP4A_RAT (P09626) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1032 Score = 28.5 bits (62), Expect = 8.2 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = -2 Query: 103 WGLLLRESDQMHKAGIRCCP 44 +GLL+ D++ K G+RCCP Sbjct: 1003 FGLLIFVYDEIRKLGVRCCP 1022
>ATP4A_MOUSE (Q64436) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1032 Score = 28.5 bits (62), Expect = 8.2 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = -2 Query: 103 WGLLLRESDQMHKAGIRCCP 44 +GLL+ D++ K G+RCCP Sbjct: 1003 FGLLIFVYDEIRKLGVRCCP 1022
>ATP4A_PIG (P19156) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1033 Score = 28.5 bits (62), Expect = 8.2 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = -2 Query: 103 WGLLLRESDQMHKAGIRCCP 44 +GLL+ D++ K G+RCCP Sbjct: 1004 FGLLIFVYDEIRKLGVRCCP 1023
>ATP4A_CANFA (P50996) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1033 Score = 28.5 bits (62), Expect = 8.2 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = -2 Query: 103 WGLLLRESDQMHKAGIRCCP 44 +GLL+ D++ K G+RCCP Sbjct: 1004 FGLLIFVYDEIRKLGVRCCP 1023
>ATP4A_RABIT (P27112) Potassium-transporting ATPase alpha chain 1 (EC 3.6.3.10)| (Proton pump) (Gastric H+/K+ ATPase alpha subunit) Length = 1034 Score = 28.5 bits (62), Expect = 8.2 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = -2 Query: 103 WGLLLRESDQMHKAGIRCCP 44 +GLL+ D++ K G+RCCP Sbjct: 1005 FGLLIFVYDEIRKLGVRCCP 1024 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,429,243 Number of Sequences: 219361 Number of extensions: 623282 Number of successful extensions: 1330 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1318 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1330 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
