| Clone Name | baal40m06 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_482990.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1299 Score = 79.8 bits (40), Expect = 7e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 220 tcaccgaggaatcagatgtgcaggagcagttgaacaagttgcaggaggagctggtaaagg 279 ||||||||| |||||| |||||||| | ||||||||| ||||||| |||||| || | Sbjct: 65 tcaccgaggcatcagagatgcaggagaaattgaacaagctgcaggaagagctgaagaatg 124 Query: 280 agaaagaggagaaggtacgtgcgctggatgagatagaggagctcaagaagaa 331 ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| Sbjct: 125 agaaaaaggagaaggcgcgtgctctggatgagatagcagggctcaagaagaa 176
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 79.8 bits (40), Expect = 7e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 220 tcaccgaggaatcagatgtgcaggagcagttgaacaagttgcaggaggagctggtaaagg 279 ||||||||| |||||| |||||||| | ||||||||| ||||||| |||||| || | Sbjct: 23749464 tcaccgaggcatcagagatgcaggagaaattgaacaagctgcaggaagagctgaagaatg 23749523 Query: 280 agaaagaggagaaggtacgtgcgctggatgagatagaggagctcaagaagaa 331 ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| Sbjct: 23749524 agaaaaaggagaaggcgcgtgctctggatgagatagcagggctcaagaagaa 23749575
>dbj|AP005391.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0092C08 Length = 131049 Score = 79.8 bits (40), Expect = 7e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 220 tcaccgaggaatcagatgtgcaggagcagttgaacaagttgcaggaggagctggtaaagg 279 ||||||||| |||||| |||||||| | ||||||||| ||||||| |||||| || | Sbjct: 38664 tcaccgaggcatcagagatgcaggagaaattgaacaagctgcaggaagagctgaagaatg 38723 Query: 280 agaaagaggagaaggtacgtgcgctggatgagatagaggagctcaagaagaa 331 ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| Sbjct: 38724 agaaaaaggagaaggcgcgtgctctggatgagatagcagggctcaagaagaa 38775
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 79.8 bits (40), Expect = 7e-12 Identities = 94/112 (83%) Strand = Plus / Plus Query: 220 tcaccgaggaatcagatgtgcaggagcagttgaacaagttgcaggaggagctggtaaagg 279 ||||||||| |||||| |||||||| | ||||||||| ||||||| |||||| || | Sbjct: 157060 tcaccgaggcatcagagatgcaggagaaattgaacaagctgcaggaagagctgaagaatg 157119 Query: 280 agaaagaggagaaggtacgtgcgctggatgagatagaggagctcaagaagaa 331 ||||| ||||||||| ||||| ||||||||||||| | |||||||||||| Sbjct: 157120 agaaaaaggagaaggcgcgtgctctggatgagatagcagggctcaagaagaa 157171
>ref|XM_991659.1| PREDICTED: Mus musculus hypothetical LOC434366 (LOC434366), mRNA Length = 361 Score = 46.1 bits (23), Expect = 0.099 Identities = 26/27 (96%) Strand = Plus / Plus Query: 324 aagaagaagagcagtaagaagaagaag 350 ||||||||||| ||||||||||||||| Sbjct: 175 aagaagaagagaagtaagaagaagaag 201
>ref|XM_955055.1| Neurospora crassa OR74A hypothetical protein (NCU07059.1) partial mRNA Length = 2898 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 305 ggatgagatagaggagctcaagaaga 330 ||||||||| |||||||||||||||| Sbjct: 864 ggatgagatggaggagctcaagaaga 889
>ref|XM_327344.1| Neurospora crassa OR74A hypothetical protein (NCU07059.1) partial mRNA Length = 2898 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 305 ggatgagatagaggagctcaagaaga 330 ||||||||| |||||||||||||||| Sbjct: 864 ggatgagatggaggagctcaagaaga 889
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 319 agctcaagaagaagagcagtaagaagaaga 348 |||||||||||||||| || |||||||||| Sbjct: 35260680 agctcaagaagaagaggaggaagaagaaga 35260651
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 319 agctcaagaagaagagcagtaagaagaaga 348 |||||||||||||||| || |||||||||| Sbjct: 11014 agctcaagaagaagaggaggaagaagaaga 10985
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Minus Query: 319 agctcaagaagaagagcagtaagaagaaga 348 |||||||||||||||| || |||||||||| Sbjct: 72730 agctcaagaagaagaggaggaagaagaaga 72701
>gb|AC101931.8| Mus musculus chromosome 1, clone RP24-63O23, complete sequence Length = 209705 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 275 aaaggagaaagaggagaaggta 296 |||||||||||||||||||||| Sbjct: 157103 aaaggagaaagaggagaaggta 157082
>ref|XM_451299.1| Kluyveromyces lactis NRRL Y-1140, KLLA0A06710g predicted mRNA Length = 1272 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 326 gaagaagagcagtaagaagaagaag 350 |||||||||||| |||||||||||| Sbjct: 331 gaagaagagcaggaagaagaagaag 355
>gb|BT013647.1| Lycopersicon esculentum clone 132453R, mRNA sequence Length = 1992 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 327 aagaagagcagtaagaagaag 347 ||||||||||||||||||||| Sbjct: 262 aagaagagcagtaagaagaag 242
>ref|XM_750048.1| Aspergillus fumigatus Af293 involucrin repeat protein (Afu2g08060) partial mRNA Length = 16617 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 aagaagagcagtaagaagaag 347 ||||||||||||||||||||| Sbjct: 2323 aagaagagcagtaagaagaag 2343
>emb|AL354762.7| Human DNA sequence from clone RP11-342E2 on chromosome 13 Contains the 5' end of a novel gene, complete sequence Length = 104999 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 agaagaagaagctaaaaggaa 360 ||||||||||||||||||||| Sbjct: 4652 agaagaagaagctaaaaggaa 4672
>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1062590 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 326 gaagaagagcagtaagaagaagaag 350 |||||||||||| |||||||||||| Sbjct: 608433 gaagaagagcaggaagaagaagaag 608457
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 312 atagaggagctcaagaagaag 332 ||||||||||||||||||||| Sbjct: 1355657 atagaggagctcaagaagaag 1355677
>emb|BX679675.28| Zebrafish DNA sequence from clone CH211-37L23 in linkage group 17, complete sequence Length = 119154 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 aagttgcaggaggagctggta 275 ||||||||||||||||||||| Sbjct: 17916 aagttgcaggaggagctggta 17936
>dbj|AP006667.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT31L14, TM0366, complete sequence Length = 100936 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 326 gaagaagagcagtaagaagaagaag 350 |||||||||||| |||||||||||| Sbjct: 14739 gaagaagagcaggaagaagaagaag 14763
>ref|NM_178953.1| Arabidopsis thaliana unknown protein AT4G01897 mRNA, complete cds Length = 917 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 323 caagaagaagagcagtaagaagaagaag 350 |||||||||||| || |||||||||||| Sbjct: 626 caagaagaagagaagcaagaagaagaag 599
>ref|NM_116420.2| Arabidopsis thaliana unknown protein AT4G01895 mRNA, complete cds Length = 423 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 caagaagaagagcagtaagaagaagaag 350 |||||||||||| || |||||||||||| Sbjct: 292 caagaagaagagaagcaagaagaagaag 319
>gb|AC152944.2| Mus musculus 10 BAC RP23-427I4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 179149 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 323 caagaagaagagcagtaagaagaagaag 350 |||||||||||||| |||||||||||| Sbjct: 144639 caagaagaagagcaagaagaagaagaag 144612
>gb|AC007138.1| Arabidopsis thaliana BAC T7B11 from chromosome IV near 10 cM, complete sequence Length = 120185 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 caagaagaagagcagtaagaagaagaag 350 |||||||||||| || |||||||||||| Sbjct: 63764 caagaagaagagaagcaagaagaagaag 63791
>gb|BC029624.1| Mus musculus RIKEN cDNA 4931414P19 gene, mRNA (cDNA clone MGC:25751 IMAGE:3992239), complete cds Length = 2600 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 taaaggagaaagaggagaag 293 |||||||||||||||||||| Sbjct: 1498 taaaggagaaagaggagaag 1517
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 198 aaccaactttccacgccgcgcttcaccg 225 |||| |||||||||||||||| |||||| Sbjct: 5254470 aacccactttccacgccgcgcatcaccg 5254443
>gb|AC140383.2| Mus musculus BAC clone RP24-212K17 from chromosome 9, complete sequence Length = 183315 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 171186 aaaggagaaagaggagaagg 171205
>gb|AC166072.2| Mus musculus BAC clone RP23-226J22 from chromosome 3, complete sequence Length = 221724 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 150585 aaaggagaaagaggagaagg 150604
>gb|AC156985.12| Mus musculus chromosome 7, clone RP23-417L14, complete sequence Length = 179492 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 98911 aaaggagaaagaggagaagg 98930
>gb|AC125101.3| Mus musculus BAC clone RP24-207F9 from chromosome 19, complete sequence Length = 162162 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 caagaagaagagcagtaagaagaagaag 350 |||||||||||| || |||||||||||| Sbjct: 85737 caagaagaagaggaggaagaagaagaag 85764
>gb|AC122499.4| Mus musculus BAC clone RP24-407O20 from chromosome 9, complete sequence Length = 186516 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 caagaagaagagcagtaagaagaagaag 350 |||||||||||||| |||||||||||| Sbjct: 11596 caagaagaagagcaagaagaagaagaag 11623
>emb|CT025529.7| Mouse DNA sequence from clone RP23-153E24 on chromosome 16, complete sequence Length = 187241 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 55339 aaaggagaaagaggagaagg 55358
>gb|AC118020.11| Mus musculus, clone RP23-459B19, complete sequence Length = 191669 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 caagaagaagagcagtaagaagaagaag 350 |||||||||||||| |||||||||||| Sbjct: 160377 caagaagaagagcaagaagaagaagaag 160404
>gb|AC125039.4| Mus musculus BAC clone RP23-335C3 from chromosome 6, complete sequence Length = 222535 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 24322 aaaggagaaagaggagaagg 24341
>gb|AC124582.4| Mus musculus BAC clone RP23-120A15 from 6, complete sequence Length = 183555 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 55598 aaaggagaaagaggagaagg 55617
>gb|AC159100.2| Mus musculus BAC clone RP24-248F9 from chromosome 9, complete sequence Length = 161485 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 323 caagaagaagagcagtaagaagaagaag 350 |||||||||||||| |||||||||||| Sbjct: 33909 caagaagaagagcaagaagaagaagaag 33882
>gb|DQ453126.1| Cyprinus carpio proteasome activator PA28 subunit mRNA, complete cds Length = 1097 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 agaggagctcaagaagaaga 333 |||||||||||||||||||| Sbjct: 366 agaggagctcaagaagaaga 385
>emb|AL928921.21| Human DNA sequence from clone RP13-392I16 on chromosome 1, complete sequence Length = 142916 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 gcaggaggagctggtaaagg 279 |||||||||||||||||||| Sbjct: 22221 gcaggaggagctggtaaagg 22240
>emb|AL157897.8| Human DNA sequence from clone RP11-8D22 on chromosome 10, complete sequence Length = 173310 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 aaggagaaagaggagaaggt 295 |||||||||||||||||||| Sbjct: 85416 aaggagaaagaggagaaggt 85397
>emb|AL117377.18|HSJ1037B9 Human DNA sequence from clone RP5-1037B9 on chromosome 20p12.1-13 Contains STSs, GSSs and a putative CpG island, complete sequence Length = 82183 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ccagcctcaagtcatcttcc 191 |||||||||||||||||||| Sbjct: 52217 ccagcctcaagtcatcttcc 52236
>emb|AL117338.15|HSA490O24 Human DNA sequence from clone RP11-490O24 on chromosome 10 Contains a 60S ribosomal protein L23 (RPL23) pseudogene and a novel gene, complete sequence Length = 168778 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ccagcctcaagtcatcttcc 191 |||||||||||||||||||| Sbjct: 85733 ccagcctcaagtcatcttcc 85714
>emb|AL031287.3|HS703H14 Human DNA sequence from clone RP4-703H14 on chromosome 1q23.2-24.3 Contains part of a novel gene, complete sequence Length = 74729 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 61361 aaaggagaaagaggagaagg 61342
>emb|Z11902.1|RNCYP17G R.norvegicus CYP17 gene, 5' upstream region Length = 3926 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 aggaggagctggtaaaggag 281 |||||||||||||||||||| Sbjct: 3143 aggaggagctggtaaaggag 3124
>emb|X69816.1|RNP450AA R.norvegicus CYP17 gene Length = 7556 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 aggaggagctggtaaaggag 281 |||||||||||||||||||| Sbjct: 1349 aggaggagctggtaaaggag 1330
>emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 5 Length = 198220 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 caagaagaagagcagtaagaagaagaag 350 |||||||||||| || |||||||||||| Sbjct: 49117 caagaagaagagaagcaagaagaagaag 49144
>gb|AC161826.5| Mus musculus 6 BAC RP23-411G8 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 183238 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 taaaggagaaagaggagaag 293 |||||||||||||||||||| Sbjct: 79936 taaaggagaaagaggagaag 79955
>gb|AC159255.3| Mus musculus BAC clone RP24-89C11 from chromosome 3, complete sequence Length = 216011 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 40275 aaaggagaaagaggagaagg 40294
>gb|AC010041.7| Drosophila melanogaster 3L BAC RP98-13D12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174712 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 aagaagagcagtaagaagaagaag 350 ||||||||||| |||||||||||| Sbjct: 58999 aagaagagcaggaagaagaagaag 58976
>gb|AC117383.4| Homo sapiens 3 BAC RP11-789L4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194991 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 324 aagaagaagagcagtaagaa 343 |||||||||||||||||||| Sbjct: 105314 aagaagaagagcagtaagaa 105333
>gb|AC021915.11| Homo sapiens chromosome 8, clone RP11-26M5, complete sequence Length = 183101 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 cagtggcaaccaactttcca 210 |||||||||||||||||||| Sbjct: 180967 cagtggcaaccaactttcca 180986
>gb|AC079603.11| Homo sapiens 12 BAC RP11-798I13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164837 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 aagaagagcagtaagaagaa 346 |||||||||||||||||||| Sbjct: 130259 aagaagagcagtaagaagaa 130278
>gb|AC079319.19| Homo sapiens 12q BAC RP11-118A3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152449 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 327 aagaagagcagtaagaagaa 346 |||||||||||||||||||| Sbjct: 876 aagaagagcagtaagaagaa 895
>ref|NM_028890.1| Mus musculus RIKEN cDNA 4931414P19 gene (4931414P19Rik), mRNA Length = 2600 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 taaaggagaaagaggagaag 293 |||||||||||||||||||| Sbjct: 1498 taaaggagaaagaggagaag 1517
>emb|CR524291.1| Gallus gallus finished cDNA, clone ChEST104p20 Length = 917 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 caagaagaagagcagtaagaagaagaag 350 ||||||||||||| | |||||||||||| Sbjct: 595 caagaagaagagcgggaagaagaagaag 622
>dbj|AK016457.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4931414P19 product:CDNA FLJ12154 FIS, CLONE MAMMA1000468 homolog [Homo sapiens], full insert sequence Length = 2059 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 taaaggagaaagaggagaag 293 |||||||||||||||||||| Sbjct: 971 taaaggagaaagaggagaag 990
>ref|NM_001029564.2| Caenorhabditis elegans H13N06.4a (H13N06.4) mRNA, complete cds Length = 1761 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tagaggagctcaagaagaag 332 |||||||||||||||||||| Sbjct: 717 tagaggagctcaagaagaag 736
>gb|AF162137.2|AF162137 Mus musculus WNT-2 gene, partial cds; putative ankyrin-related protein and cystic fibrosis transmembrane conductance regulator (CFTR) genes, complete cds; and unknown gene Length = 357856 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 taaaggagaaagaggagaag 293 |||||||||||||||||||| Sbjct: 137643 taaaggagaaagaggagaag 137662
>gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188768 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 141225 aaaggagaaagaggagaagg 141244
>gb|AC103831.4| Homo sapiens chromosome 8, clone RP11-1023P17, complete sequence Length = 206357 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 cagtggcaaccaactttcca 210 |||||||||||||||||||| Sbjct: 159156 cagtggcaaccaactttcca 159137
>gb|AC008750.9| Homo sapiens chromosome 19 clone CTD-2616J11, complete sequence Length = 143045 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 31969 aaaggagaaagaggagaagg 31988
>gb|AC022215.4|AC022215 Homo sapiens BAC clone RP11-764I5 from 3, complete sequence Length = 180068 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 aagaagaagagcagtaagaa 343 |||||||||||||||||||| Sbjct: 23401 aagaagaagagcagtaagaa 23382
>ref|XM_235691.3| PREDICTED: Rattus norvegicus extra spindle poles like 1 (S. cerevisiae) (predicted) (Espl1_predicted), mRNA Length = 4989 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 160 tctccttcaagtccagcctc 179 |||||||||||||||||||| Sbjct: 3610 tctccttcaagtccagcctc 3591
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 cacgccgcgcttcaccgagg 228 |||||||||||||||||||| Sbjct: 636178 cacgccgcgcttcaccgagg 636159
>gb|AF107259.1|AF107259 Homo sapiens chromosome 21q22.1 cosmid clone ICRFcA0552D2, complete sequence, containing part of the glutamate receptor gene GLUR5 Length = 42440 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 42211 aaaggagaaagaggagaagg 42230
>dbj|BS000174.1| Pan troglodytes chromosome 22 clone:PTB-137B16, map 22, complete sequences Length = 193756 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 105560 aaaggagaaagaggagaagg 105579
>gb|AY826401.1| Ophioglossum petiolatum maturase K-like protein (matK) gene, complete cds; chloroplast Length = 2322 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tgattctcgtaagagtaacc 99 |||||||||||||||||||| Sbjct: 704 tgattctcgtaagagtaacc 685
>emb|AJ252204.1|ATH252204 Arabidopsis thaliana mRNA for NIMIN-1b protein (nimin-1b gene) Length = 423 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 caagaagaagagcagtaagaagaagaag 350 |||||||||||| || |||||||||||| Sbjct: 292 caagaagaagagaagcaagaagaagaag 319
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 325 agaagaagagcagtaagaagaaga 348 ||||||||||||| |||||||||| Sbjct: 1926114 agaagaagagcagaaagaagaaga 1926091
>gb|AE003555.3| Drosophila melanogaster chromosome 3L, section 30 of 83 of the complete sequence Length = 283781 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 327 aagaagagcagtaagaagaagaag 350 ||||||||||| |||||||||||| Sbjct: 88017 aagaagagcaggaagaagaagaag 87994
>dbj|AP001705.1| Homo sapiens genomic DNA, chromosome 21q, section 49/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 312969 aaaggagaaagaggagaagg 312988
>dbj|AP000238.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-313P22, complete sequence Length = 62873 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 9002 aaaggagaaagaggagaagg 9021
>gb|AC174646.2| Mus musculus BAC clone RP23-9P6 from chromosome 9, complete sequence Length = 199765 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 159268 aaaggagaaagaggagaagg 159287
>gb|AY722916.1| Drosophila ogumai odysseus mRNA, partial cds Length = 984 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ctccttcaagtccagcctca 180 |||||||||||||||||||| Sbjct: 393 ctccttcaagtccagcctca 374
>gb|AY700776.1| Drosophila ogumai odysseus gene, exons 2 through 4 and partial cds Length = 2256 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ctccttcaagtccagcctca 180 |||||||||||||||||||| Sbjct: 120 ctccttcaagtccagcctca 101
>gb|AY700775.1| Drosophila ohnishii odysseus gene, exons 2 through 4 and partial cds Length = 2143 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ctccttcaagtccagcctca 180 |||||||||||||||||||| Sbjct: 120 ctccttcaagtccagcctca 101
>gb|AY700774.1| Drosophila lini odysseus gene, exons 2 through 4 and partial cds Length = 2130 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 ctccttcaagtccagcctca 180 |||||||||||||||||||| Sbjct: 120 ctccttcaagtccagcctca 101
>gb|AC120846.16| Mus musculus chromosome 7, clone RP24-317L6, complete sequence Length = 192429 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 152332 aaaggagaaagaggagaagg 152351
>gb|BC034212.1| Mus musculus cDNA clone IMAGE:4989238, containing frame-shift errors Length = 2620 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 taaaggagaaagaggagaag 293 |||||||||||||||||||| Sbjct: 1499 taaaggagaaagaggagaag 1518
>emb|CT009512.6| Mouse DNA sequence from clone RP23-94B13 on chromosome 14, complete sequence Length = 232468 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 taaaggagaaagaggagaag 293 |||||||||||||||||||| Sbjct: 196586 taaaggagaaagaggagaag 196605
>gb|U32177.1|MMU32177 Mus musculus type VII collagen gene, complete cds Length = 31771 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 6225 aaaggagaaagaggagaagg 6206
>emb|Z99942.1|CEH13N06 Caenorhabditis elegans Fosmid H13N06, complete sequence Length = 29355 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 tagaggagctcaagaagaag 332 |||||||||||||||||||| Sbjct: 18191 tagaggagctcaagaagaag 18210
>gb|L04873.1|MUSCFTRAA Mus musculus cystic fibrosis transmembrane regulator (CFTR) gene, exon 1, and upstream region Length = 2589 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 taaaggagaaagaggagaag 293 |||||||||||||||||||| Sbjct: 670 taaaggagaaagaggagaag 689
>dbj|AP000198.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B355D16-T1073, segment 4/8, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 65024 aaaggagaaagaggagaagg 65005
>dbj|AP000094.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, B335D16-P10G11 region, segment 4/7 Length = 100000 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 aaaggagaaagaggagaagg 294 |||||||||||||||||||| Sbjct: 65024 aaaggagaaagaggagaagg 65005 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,797,186 Number of Sequences: 3902068 Number of extensions: 4797186 Number of successful extensions: 113121 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 83 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112815 Number of HSP's gapped (non-prelim): 306 length of query: 452 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 430 effective length of database: 17,147,199,772 effective search space: 7373295901960 effective search space used: 7373295901960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)