>ref|XM_471232.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1065

 Score =  107 bits (54), Expect = 2e-20
 Identities = 102/118 (86%)
 Strand = Plus / Plus

                                                                       
Query: 150 ctgatgctccttcaagccctgtttatcataatgtttatgtacgacgaaaggtggaaactg 209
           |||||||||||||||| ||||  ||||||||||||||||||||| |||| ||||||| ||
Sbjct: 167 ctgatgctccttcaagtcctgggtatcataatgtttatgtacgaagaaaagtggaaaatg 226

                                                                     
Query: 210 agcataataaagtgagctcgtctcaggagatgaaggttcatgggaaggacaaaacaaa 267
           | |||| ||||||||| || ||||||||| |||||| | |||| |  |||||||||||
Sbjct: 227 accatagtaaagtgagttcttctcaggaggtgaagggtaatggaagagacaaaacaaa 284



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 24  catcacgtgagctgctaaacaaaggtaccaacatcataagtatgtctcaaggcacttctc 83
           |||| |||||||||| ||| |||||| |  ||||  ||| ||||||||| |||||||| |
Sbjct: 47  catcgcgtgagctgccaaagaaaggtgcagacattgtaaatatgtctcagggcacttcac 106

                                    
Query: 84  tgccgccaaaggataaaggtcctgc 108
            || |||||||||||||||| ||||
Sbjct: 107 cgctgccaaaggataaaggtactgc 131

>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20,
             complete sequence
          Length = 138572

 Score =  107 bits (54), Expect = 2e-20
 Identities = 102/118 (86%)
 Strand = Plus / Plus

                                                                         
Query: 150   ctgatgctccttcaagccctgtttatcataatgtttatgtacgacgaaaggtggaaactg 209
             |||||||||||||||| ||||  ||||||||||||||||||||| |||| ||||||| ||
Sbjct: 48813 ctgatgctccttcaagtcctgggtatcataatgtttatgtacgaagaaaagtggaaaatg 48872

                                                                       
Query: 210   agcataataaagtgagctcgtctcaggagatgaaggttcatgggaaggacaaaacaaa 267
             | |||| ||||||||| || ||||||||| |||||| | |||| |  |||||||||||
Sbjct: 48873 accatagtaaagtgagttcttctcaggaggtgaagggtaatggaagagacaaaacaaa 48930



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                         
Query: 24    catcacgtgagctgctaaacaaaggtaccaacatcataagtatgtctcaaggcacttctc 83
             |||| |||||||||| ||| |||||| |  ||||  ||| ||||||||| |||||||| |
Sbjct: 48693 catcgcgtgagctgccaaagaaaggtgcagacattgtaaatatgtctcagggcacttcac 48752

                                      
Query: 84    tgccgccaaaggataaaggtcctgc 108
              || |||||||||||||||| ||||
Sbjct: 48753 cgctgccaaaggataaaggtactgc 48777

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  107 bits (54), Expect = 2e-20
 Identities = 102/118 (86%)
 Strand = Plus / Plus

                                                                           
Query: 150     ctgatgctccttcaagccctgtttatcataatgtttatgtacgacgaaaggtggaaactg 209
               |||||||||||||||| ||||  ||||||||||||||||||||| |||| ||||||| ||
Sbjct: 2432911 ctgatgctccttcaagtcctgggtatcataatgtttatgtacgaagaaaagtggaaaatg 2432970

                                                                         
Query: 210     agcataataaagtgagctcgtctcaggagatgaaggttcatgggaaggacaaaacaaa 267
               | |||| ||||||||| || ||||||||| |||||| | |||| |  |||||||||||
Sbjct: 2432971 accatagtaaagtgagttcttctcaggaggtgaagggtaatggaagagacaaaacaaa 2433028



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                           
Query: 24      catcacgtgagctgctaaacaaaggtaccaacatcataagtatgtctcaaggcacttctc 83
               |||| |||||||||| ||| |||||| |  ||||  ||| ||||||||| |||||||| |
Sbjct: 2432791 catcgcgtgagctgccaaagaaaggtgcagacattgtaaatatgtctcagggcacttcac 2432850

                                        
Query: 84      tgccgccaaaggataaaggtcctgc 108
                || |||||||||||||||| ||||
Sbjct: 2432851 cgctgccaaaggataaaggtactgc 2432875

>dbj|AK067888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126H20, full
           insert sequence
          Length = 1606

 Score =  107 bits (54), Expect = 2e-20
 Identities = 102/118 (86%)
 Strand = Plus / Plus

                                                                       
Query: 150 ctgatgctccttcaagccctgtttatcataatgtttatgtacgacgaaaggtggaaactg 209
           |||||||||||||||| ||||  ||||||||||||||||||||| |||| ||||||| ||
Sbjct: 442 ctgatgctccttcaagtcctgggtatcataatgtttatgtacgaagaaaagtggaaaatg 501

                                                                     
Query: 210 agcataataaagtgagctcgtctcaggagatgaaggttcatgggaaggacaaaacaaa 267
           | |||| ||||||||| || ||||||||| |||||| | |||| |  |||||||||||
Sbjct: 502 accatagtaaagtgagttcttctcaggaggtgaagggtaatggaagagacaaaacaaa 559



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 71/85 (83%)
 Strand = Plus / Plus

                                                                       
Query: 24  catcacgtgagctgctaaacaaaggtaccaacatcataagtatgtctcaaggcacttctc 83
           |||| |||||||||| ||| |||||| |  ||||  ||| ||||||||| |||||||| |
Sbjct: 322 catcgcgtgagctgccaaagaaaggtgcagacattgtaaatatgtctcagggcacttcac 381

                                    
Query: 84  tgccgccaaaggataaaggtcctgc 108
            || |||||||||||||||| ||||
Sbjct: 382 cgctgccaaaggataaaggtactgc 406

>gb|AF484510.1| HIV-1 isolate 98UG57139 from Uganda, partial genome
          Length = 8833

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 53   aacatcataagtatgtctcaagg 75
            |||||||||||||||||||||||
Sbjct: 4322 aacatcataagtatgtctcaagg 4344

>gb|AC118545.20| Mus musculus strain C57BL/6J clone rp23-324o14 map 17, complete sequence
          Length = 236365

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 195    gaaaggtggaaactgagcata 215
              |||||||||||||||||||||
Sbjct: 166658 gaaaggtggaaactgagcata 166678

>gb|AC007335.7| Homo sapiens chromosome 16 clone RP11-165M2, complete sequence
          Length = 134482

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 30    gtgagctgctaaacaaaggtaccaa 54
             |||||| ||||||||||||||||||
Sbjct: 23133 gtgagcagctaaacaaaggtaccaa 23109

>emb|AL672281.18| Mouse DNA sequence from clone DN-322E23 on chromosome 3 Contains the 5'
             end of the Ptgfrn gene for prostaglandin F2 receptor
             negative regulator and a CpG island, complete sequence
          Length = 73520

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 147   atactgatgctccttcaagcc 167
             |||||||||||||||||||||
Sbjct: 22486 atactgatgctccttcaagcc 22466

>gb|AC020766.10| Homo sapiens chromosome 16 clone RP11-70N16, complete sequence
          Length = 173595

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 30     gtgagctgctaaacaaaggtaccaa 54
              |||||| ||||||||||||||||||
Sbjct: 169330 gtgagcagctaaacaaaggtaccaa 169354

>emb|CR594153.1| full-length cDNA clone CS0DI007YB01 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1267

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 80  tctctgccgccaaaggataaaggtc 104
           ||||||| |||||||||||||||||
Sbjct: 826 tctctgctgccaaaggataaaggtc 850

>gb|AY586546.1| HIV-1 isolate Cu100 from Cuba, complete genome
          Length = 9008

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 53   aacatcataagtatgtctcaa 73
            |||||||||||||||||||||
Sbjct: 4592 aacatcataagtatgtctcaa 4612

>gb|AC040168.8| Homo sapiens chromosome 16 clone RP11-461O7, complete sequence
          Length = 170154

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 30   gtgagctgctaaacaaaggtaccaa 54
            |||||| ||||||||||||||||||
Sbjct: 3065 gtgagcagctaaacaaaggtaccaa 3089

>gb|AC073149.5| Homo sapiens BAC clone RP11-803F15 from 2, complete sequence
          Length = 99685

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 80    tctctgccgccaaaggataaaggtc 104
             ||||||| |||||||||||||||||
Sbjct: 68375 tctctgctgccaaaggataaaggtc 68399

>gb|AC091484.8| Mus musculus strain C57BL/6J chromosome 17 clone rp23-386a1, complete
             sequence
          Length = 205343

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 195   gaaaggtggaaactgagcata 215
             |||||||||||||||||||||
Sbjct: 60670 gaaaggtggaaactgagcata 60690

>emb|AL645930.15| Mouse DNA sequence from clone RP23-434L7 on chromosome 3, complete
             sequence
          Length = 227993

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 147   atactgatgctccttcaagcc 167
             |||||||||||||||||||||
Sbjct: 40575 atactgatgctccttcaagcc 40555

>emb|AL832364.1|HSM803672 Homo sapiens mRNA; cDNA DKFZp451O246 (from clone DKFZp451O246)
          Length = 4726

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 80   tctctgccgccaaaggataaaggtc 104
            ||||||| |||||||||||||||||
Sbjct: 4233 tctctgctgccaaaggataaaggtc 4257

>gb|AC186559.1| Gasterosteus aculeatus clone VMRC26-231K03, complete sequence
          Length = 150088

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 135   caaaacggctgcatactgat 154
             ||||||||||||||||||||
Sbjct: 54507 caaaacggctgcatactgat 54526

>gb|AC113095.14| Mus musculus chromosome 9, clone RP23-311A1, complete sequence
          Length = 205429

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    gccaaaggataaaggtcctg 107
             ||||||||||||||||||||
Sbjct: 46385 gccaaaggataaaggtcctg 46366

>emb|AL136535.1|SPBP23A10 S.pombe chromosome II p1 p23A10
          Length = 39999

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     gagggaaaacagcagcatca 28
             ||||||||||||||||||||
Sbjct: 38541 gagggaaaacagcagcatca 38522

>emb|AL928725.18| Zebrafish DNA sequence from clone CH211-13O20 in linkage group 23,
             complete sequence
          Length = 199910

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 169   tgtttatcataatgtttatg 188
             ||||||||||||||||||||
Sbjct: 30211 tgtttatcataatgtttatg 30230

>gb|AC008519.5| Homo sapiens chromosome 5 clone CTC-460G13, complete sequence
          Length = 195979

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tctcaaggcacttctctgcc 87
              ||||||||||||||||||||
Sbjct: 100427 tctcaaggcacttctctgcc 100408

>ref|NM_001021732.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPBP23A10.16), partial mRNA
          Length = 561

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 9   gagggaaaacagcagcatca 28
           ||||||||||||||||||||
Sbjct: 232 gagggaaaacagcagcatca 213

>gb|AC118475.44| Mus musculus chromosome 13, clone RP23-359G8, complete sequence
          Length = 190284

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    tttatcataatgtttatgta 190
              ||||||||||||||||||||
Sbjct: 130430 tttatcataatgtttatgta 130449


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,528,376
Number of Sequences: 3902068
Number of extensions: 2528376
Number of successful extensions: 51003
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50955
Number of HSP's gapped (non-prelim): 48
length of query: 273
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 251
effective length of database: 17,147,199,772
effective search space: 4303947142772
effective search space used: 4303947142772
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)