Clone Information

BLAST Search Result

Clone Name	baal41a20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	UL61_HCMVA (P16818) Hypothetical protein UL61	36	0.093
2	PTC1_HUMAN (Q13635) Protein patched homolog 1 (PTC1) (PTC)	35	0.16
3	IF2_DESVH (Q72ER1) Translation initiation factor IF-2	35	0.21
4	Y24K_STRGR (P12752) Hypothetical 24.7 kDa protein in photolyase ...	35	0.27
5	RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine syntha...	34	0.35
6	SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD...	28	0.40
7	BFR2_NEUCR (Q7S6P8) Protein bfr-2	34	0.46
8	CJ047_HUMAN (Q86WR7) Protein C10orf47	33	0.60
9	IF2_CORDI (Q6NGN2) Translation initiation factor IF-2	33	0.60
10	SRPK1_HUMAN (Q96SB4) Serine/threonine-protein kinase SRPK1 (EC 2...	33	0.79
11	IF2_DESDG (Q30WJ0) Translation initiation factor IF-2	33	1.0
12	IF2_STRAW (Q82K53) Translation initiation factor IF-2	32	1.3
13	SPEG_RAT (Q63638) Striated muscle-specific serine/threonine prot...	32	1.3
14	IF2_RHOPA (Q6NCN5) Translation initiation factor IF-2	32	1.3
15	PRP2_RAT (P10164) Acidic proline-rich protein PRP25 precursor (F...	32	1.8
16	WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)	32	1.8
17	SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (C...	27	1.8
18	NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 p...	32	2.3
19	PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regula...	31	3.0
20	TONB_PSEAE (Q51368) Protein tonB	31	3.0
21	PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regu...	31	3.0
22	PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (P...	31	3.0
23	MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-...	31	3.0
24	RTN1_RAT (Q64548) Reticulon-1 (Neuroendocrine-specific protein) ...	31	3.0
25	RLUB_XANCP (Q8P8M6) Ribosomal large subunit pseudouridine syntha...	31	3.0
26	SLAP_BACCI (P35824) S-layer-related protein precursor	31	3.9
27	COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibr...	31	3.9
28	IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2	31	3.9
29	NET1_YEAST (P47035) Nucleolar protein NET1	31	3.9
30	TPA_BOVIN (Q28198) Tissue-type plasminogen activator precursor (...	31	3.9
31	PKHA4_RAT (P60669) Pleckstrin homology domain-containing family ...	31	3.9
32	SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)	31	3.9
33	IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2	31	3.9
34	LIMD1_MOUSE (Q9QXD8) LIM domains-containing protein 1	31	3.9
35	TRIB1_HUMAN (Q96RU8) Tribbles homolog 1 (TRB-1) (SKIP1) (G-prote...	31	3.9
36	SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine pr...	30	5.1
37	RSMB_RAT (P17136) Small nuclear ribonucleoprotein-associated pro...	30	5.1
38	IF2_CORGL (Q8NP40) Translation initiation factor IF-2	30	5.1
39	GPC2_HUMAN (Q8N158) Glypican-2 precursor	30	5.1
40	ATX1_HUMAN (P54253) Ataxin-1 (Spinocerebellar ataxia type 1 prot...	30	5.1
41	PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regula...	30	5.1
42	CO2A1_CHICK (P02460) Collagen alpha-1(II) chain precursor (Fragm...	30	5.1
43	RSMB_HUMAN (P14678) Small nuclear ribonucleoprotein-associated p...	30	5.1
44	RSMB_ERIEU (Q9TU67) Small nuclear ribonucleoprotein-associated p...	30	5.1
45	PRP2_MOUSE (P05142) Proline-rich protein MP-2 precursor	30	5.1
46	PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regu...	30	5.1
47	PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regu...	30	5.1
48	PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regu...	30	5.1
49	TOP3_CAEEL (O61660) DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoi...	30	6.7
50	IF2_THEFY (Q47RV1) Translation initiation factor IF-2	30	6.7
51	CSP_PLABA (P23093) Circumsporozoite protein precursor (CS)	30	6.7
52	REXO4_NEUCR (Q7S9B7) RNA exonuclease 4 (EC 3.1.-.-)	30	6.7
53	PSIP1_RAT (Q812D1) PC4 and SFRS1-interacting protein (Lens epith...	30	6.7
54	PKHA4_MOUSE (Q8VC98) Pleckstrin homology domain-containing famil...	30	6.7
55	MUTL_CHLTE (Q8KAX3) DNA mismatch repair protein mutL	30	6.7
56	ANDR_PIG (Q9GKL7) Androgen receptor (Dihydrotestosterone receptor)	30	6.7
57	COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor	30	6.7
58	CSP_PLABE (P06915) Circumsporozoite protein precursor (CS)	30	6.7
59	ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 prot...	30	6.7
60	MBD2_MOUSE (Q9Z2E1) Methyl-CpG-binding domain protein 2 (Methyl-...	30	6.7
61	GLR35_ARATH (Q9SW97) Glutamate receptor 3.5 precursor (Ligand-ga...	30	6.7
62	RSMB_MOUSE (P27048) Small nuclear ribonucleoprotein-associated p...	30	8.7
63	CTPI_MYCTU (Q10900) Probable cation-transporting ATPase I (EC 3....	30	8.7
64	SMR1_MOUSE (Q61900) Submaxillary gland androgen-regulated protei...	30	8.7
65	ATX1_RAT (Q63540) Ataxin-1 (Spinocerebellar ataxia type 1 protei...	30	8.7
66	PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment)	30	8.7
67	CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Frag...	30	8.7
68	CI040_MOUSE (Q8VCE4) Protein C9orf40 homolog	30	8.7
69	URE11_STRCO (Q9FCD3) Urease alpha subunit 1 (EC 3.5.1.5) (Urea a...	30	8.7
70	HES1_RAT (Q04666) Transcription factor HES-1 (Hairy and enhancer...	30	8.7
71	KDC2_DROME (P16912) Protein kinase DC2 (EC 2.7.11.1)	30	8.7
72	PRB3_HUMAN (Q04118) Basic salivary proline-rich protein 3 precur...	30	8.7
73	CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel al...	30	8.7

>UL61_HCMVA (P16818) Hypothetical protein UL61|
          Length = 431

 Score = 36.2 bits (82), Expect = 0.093
 Identities = 47/162 (29%), Positives = 58/162 (35%), Gaps = 3/162 (1%)
 Frame = +3

Query: 153 PSDEPVLCKVYRSPR---AGPVVEPKAAAGRKRNSKRRLDTSGAGTPVLTLGHALGTRNX 323
           PS  P     YR  R   A P  + KA  G K +   R    G G+PV   G +LGT   
Sbjct: 164 PSPPPSTRPTYRRRRPTAATPSRKKKARRGPKASKAGREGELGGGSPVAHRGTSLGT--- 220

Query: 324 XXXXXXXXXXXXXXGRKKRKTDSRNPGPVLRPARGVLKLTRPATPGRKKKDLCVRCGVEP 503
                         GR +    +R PGPV   A G    +R  +PG  +       G EP
Sbjct: 221 -----GVRDPAPRGGRGR----ARTPGPVHSAAGG--PGSRRRSPGAARDP-----GPEP 264

Query: 504 AESHSGTAEEEDGSETDLVEDDSMTGESAAIHGNEAGESSGG 629
            E   G  +   GS      +        A  G   G SSGG
Sbjct: 265 GEERGGGGKPPLGSPRATDGNRDPGAGVPARPGRRMGGSSGG 306

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>PTC1_HUMAN (Q13635) Protein patched homolog 1 (PTC1) (PTC)|
          Length = 1447

 Score = 35.4 bits (80), Expect = 0.16
 Identities = 23/77 (29%), Positives = 37/77 (48%)
 Frame = +3

Query: 399  PGPVLRPARGVLKLTRPATPGRKKKDLCVRCGVEPAESHSGTAEEEDGSETDLVEDDSMT 578
            P P + PA G   L R  TP  +     VR  + P  +HSG+    D S+++     +++
Sbjct: 1180 PYPEVSPANG---LNRLPTPSPEPPPSVVRFAMPPGHTHSGS----DSSDSEYSSQTTVS 1232

Query: 579  GESAAIHGNEAGESSGG 629
            G S  +   EA + +GG
Sbjct: 1233 GLSEELRHYEAQQGAGG 1249

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>IF2_DESVH (Q72ER1) Translation initiation factor IF-2|
          Length = 1079

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +2

Query: 65  EQGGRPAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQP-ARRPGGGTQSGG 229
           E G RPAG   P+G   G  RP       P G  RP  G P+P  +R GG   +GG
Sbjct: 359 EGGYRPAGGPRPEGQREGGYRP---GAPRPEGGYRPAGGAPRPEGQREGGYRPAGG 411



 Score = 31.2 bits (69), Expect = 3.0
 Identities = 22/59 (37%), Positives = 25/59 (42%)
 Frame = +2

Query: 65  EQGGRPAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPGGGTQSGGWTQA 241
           E G RP GP    G   G   PRP     P G  RP +G  +   RPG     GG+  A
Sbjct: 337 EGGYRPGGPRPEGGYRPG--APRPEGGYRPAGGPRP-EGQREGGYRPGAPRPEGGYRPA 392



 Score = 31.2 bits (69), Expect = 3.0
 Identities = 22/65 (33%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
 Frame = +2

Query: 71  GGRPAGPEHPDGMDHG*DRP--------RPWPTRGPLGRARPVQGVPQPARRPGGGTQSG 226
           G RP G   P+G   G  RP        RP     P G  RP    P+   RPG     G
Sbjct: 301 GQRPEGGYRPEGQREGGYRPEGQREGGYRPGGAPRPEGGYRPGGPRPEGGYRPGAPRPEG 360

Query: 227 GWTQA 241
           G+  A
Sbjct: 361 GYRPA 365

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>Y24K_STRGR (P12752) Hypothetical 24.7 kDa protein in photolyase 5'region|
          Length = 238

 Score = 34.7 bits (78), Expect = 0.27
 Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
 Frame = -2

Query: 261 PAAALSSACVQPPLWVPPPG---RRAGCGTPCTGRARP-----RGPLVGHG 133
           PA     +C  PP     P    RRA C T C GR+RP     R P  GHG
Sbjct: 23  PAPRRCGSCRPPPPGSASPSPRPRRASCATGCCGRSRPYARRLRRPADGHG 73

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>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC|
           5.4.99.-) (rRNA-uridine isomerase B) (rRNA
           pseudouridylate synthase B)
          Length = 550

 Score = 34.3 bits (77), Expect = 0.35
 Identities = 23/53 (43%), Positives = 27/53 (50%)
 Frame = +2

Query: 71  GGRPAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPGGGTQSGG 229
           G R AGP  P     G  + RP+  +GP G ARP  G P  AR  G G  +GG
Sbjct: 399 GHRNAGPSGP-----GTGQARPYAKKGP-GGARPGTGGPVGARSGGPGRGAGG 445

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>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding|
           SR-like protein RA4) (Fragment)
          Length = 1048

 Score = 28.5 bits (62), Expect(2) = 0.40
 Identities = 21/61 (34%), Positives = 23/61 (37%)
 Frame = -2

Query: 252 ALSSACVQPPLWVPPPGRRAGCGTPCTGRARPRGPLVGHGRGRSQP*SIPSGCSGPAGLP 73
           AL      PPL +PPPG   G   P      P  P  G G     P  +P G   P   P
Sbjct: 608 ALQPPAFTPPLGIPPPGFGPGVPPP----PPPPPPFWGPG---FNPMHLPPGFLPPGPPP 660

Query: 72  P 70
           P
Sbjct: 661 P 661



 Score = 24.3 bits (51), Expect(2) = 0.40
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = -3

Query: 398 VPAVGLPLLAPXXXXXXXXXXXXXXRIPGPERVPQGQHGRPCARSVQPPL*VP 240
           VP   LP+ AP               +P P+ VP  Q G P   ++QPP   P
Sbjct: 578 VPVPALPVPAPIT-------------VPPPQ-VPPHQPGPPVVGALQPPAFTP 616

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>BFR2_NEUCR (Q7S6P8) Protein bfr-2|
          Length = 636

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
 Frame = +3

Query: 441 TRPATPGR--KKKDLCVRCGVEP--AESHSGTA--EEEDGSETDLVED-----DSMTGES 587
           ++P TP +  KK DL VR    P  A+  SG+   EEE+  E DL ED     DS  GE 
Sbjct: 164 SKPKTPAKTSKKDDLAVRIKKRPTAADFMSGSEDDEEEEDDEEDLEEDEEDEEDSEEGEQ 223

Query: 588 AAIHGNEAGES 620
             +   EA E+
Sbjct: 224 NGLFDMEAEET 234

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>CJ047_HUMAN (Q86WR7) Protein C10orf47|
          Length = 435

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 27/91 (29%), Positives = 40/91 (43%)
 Frame = -1

Query: 310 PSACPRVSTGVPAPEVSSRRFEFRLRPAAALGSTTGPARGLRYTLHRTGSSEGPSCWPWS 131
           P   PR+   VP P V +++   R+    AL S T P R  R    RT ++ GP      
Sbjct: 181 PVEHPRLLRSVPTPLVMAQKISERMAGNEAL-SPTSPFREGRPGEWRTPAARGPRS---G 236

Query: 130 RPISTMIHPVRMLRTRWPSSLLMKEKNCRHP 38
            P     HP +    R+PS++++     R P
Sbjct: 237 DPGPGPSHPAQPKAPRFPSNIIVTNGAAREP 267

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>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2|
          Length = 953

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = +2

Query: 125 RPRPWPTRGPLGRA-----RPVQGVPQPARRPGGGTQSG 226
           RP+  P   P GRA      P    P+PA RPGGG +SG
Sbjct: 159 RPQAKPAPKPGGRAPRVANNPFSSGPRPAPRPGGGNRSG 197

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>SRPK1_HUMAN (Q96SB4) Serine/threonine-protein kinase SRPK1 (EC 2.7.11.1)|
           (Serine/arginine-rich protein-specific kinase 1)
           (SR-protein-specific kinase 1) (SFRS protein kinase 1)
          Length = 826

 Score = 33.1 bits (74), Expect = 0.79
 Identities = 26/82 (31%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
 Frame = -1

Query: 244 FRLRPAAALGSTTGPARGLRYTLHRTGSSEGPSCWPWSRPISTMIHPVR-MLRTRWPSSL 68
           F  RPA ALG   GPA G        G    P   P +RP +   HP R +L   W +S 
Sbjct: 77  FPARPARALGPLQGPALG--------GRRRPPPARPLTRPETPPAHPARALLCAPWAASP 128

Query: 67  LMKEKNCRHPXGWSPSRTGLTP 2
                    P      + GL P
Sbjct: 129 TPAASPSPQPPPRQAPQPGLAP 150

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>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2|
          Length = 984

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 23/48 (47%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
 Frame = +2

Query: 71  GGRPAGPEHPDGMDHG*DRP---RPWPTRGPL--GRARPVQGVPQPAR 199
           G RPAGP  P G   G  RP   RP P  G    G ARP  G  QPA+
Sbjct: 287 GARPAGPR-PGGPRQGDSRPGDGRPAPRSGAPRPGGARPAAGFGQPAQ 333

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>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 20/53 (37%), Positives = 23/53 (43%)
 Frame = +2

Query: 71  GGRPAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPGGGTQSGG 229
           G RPAGP   +          P+ + G  G ARP    P  A RPGG    GG
Sbjct: 206 GARPAGPRPGNN---------PFTSGGSTGMARPQAPRPGGAPRPGGAGAPGG 249

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>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase|
           (EC 2.7.11.1) (Aortic preferentially expressed protein
           1) (APEG-1)
          Length = 3259

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = -2

Query: 261 PAAALSSACVQPPLWVPPPGRRAGCGTPCTGRARPRGPLVGHGRGRSQP 115
           P+   +S  V P    PPP   AG     TGR R RGP+     GR++P
Sbjct: 544 PSIPKTSRAVSPAATQPPPPSGAGKSGDETGRPRSRGPV-----GRTEP 587

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>IF2_RHOPA (Q6NCN5) Translation initiation factor IF-2|
          Length = 883

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 20/52 (38%), Positives = 22/52 (42%)
 Frame = +2

Query: 80  PAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPGGGTQSGGWT 235
           PAG       + G D   P   R P G ARP     QPA +PG   Q G  T
Sbjct: 208 PAGRPPAVAAEAGDDDEAPRMIRRPGGPARPAPPPKQPAAKPGASKQRGRLT 259

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>PRP2_RAT (P10164) Acidic proline-rich protein PRP25 precursor (Fragment)|
          Length = 172

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = +2

Query: 68  QGGRPAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPGGGTQSGG 229
           Q G+P GP  P G       P+P   +GP     P +  PQP  +P G T  GG
Sbjct: 83  QPGKPQGPPPPGGPQK--KPPQPGKPQGPPPPGGPQKKPPQPG-KPQGPTPPGG 133

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>WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)|
          Length = 501

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -2

Query: 231 QPPLWVPPPGRRAGCGTPCTGRARPRGPLVGHGRGRSQP-*SIPSGCSGPAGLP 73
           Q PL  PPP  R G          PR P+VG  +GRS P   +P G + P   P
Sbjct: 309 QEPLPPPPPPSRGG-------NQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTP 355

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>SFR15_HUMAN (O95104) Splicing factor, arginine/serine-rich 15 (CTD-binding|
           SR-like protein RA4)
          Length = 1147

 Score = 26.9 bits (58), Expect(2) = 1.8
 Identities = 20/61 (32%), Positives = 23/61 (37%)
 Frame = -2

Query: 252 ALSSACVQPPLWVPPPGRRAGCGTPCTGRARPRGPLVGHGRGRSQP*SIPSGCSGPAGLP 73
           AL      PPL +PPPG   G   P      P  P +  G     P  +P G   P   P
Sbjct: 694 ALQPPAFTPPLGIPPPGFGPGVPPP-----PPPPPFLRPG---FNPMHLPPGFLPPGPPP 745

Query: 72  P 70
           P
Sbjct: 746 P 746



 Score = 23.5 bits (49), Expect(2) = 1.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 311 PERVPQGQHGRPCARSVQPPL*VP 240
           P +VP  Q G P   ++QPP   P
Sbjct: 679 PPQVPPHQPGPPVVGALQPPAFTP 702

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>NMDE4_RAT (Q62645) Glutamate [NMDA] receptor subunit epsilon 4 precursor|
            (N-methyl D-aspartate receptor subtype 2D) (NR2D)
            (NMDAR2D)
          Length = 1323

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = -2

Query: 228  PPLWV--PPPGRRAGCGTPCTGRARPRGPLVGHGRGRSQP 115
            PP W   PPP RRA CG P   R  P  P   H    + P
Sbjct: 1199 PPPWAAGPPPRRRARCGCP---RPHPHRPRASHRAPAAAP 1235

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>PP1RA_RAT (O55000) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (PNUTS
           protein) (MHC class I region proline-rich protein CAT53)
          Length = 872

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +2

Query: 71  GGRPAGPEHPDGMDH---G*DRPRPWPTRGPLGRARP-VQGVPQPAR 199
           G  P GP  P GM H   G   P P P  GP G   P + G P P+R
Sbjct: 628 GFPPGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPSR 674

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>TONB_PSEAE (Q51368) Protein tonB|
          Length = 342

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = -2

Query: 213 PPPGRRAGCGTPCTGRARPRGPLVGHGRGRSQP*SIPSGCSGPAGLP 73
           P P   A      +  A P  P VG     +Q  + PSG  GPAGLP
Sbjct: 201 PEPSTEASSQPSPSSAAPPPAPTVGQSTPGAQ--TAPSGSQGPAGLP 245

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>PP1RA_MOUSE (Q80W00) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 888

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +2

Query: 71  GGRPAGPEHPDGMDH---G*DRPRPWPTRGPLGRARP-VQGVPQPAR 199
           G  P GP  P GM H   G   P P P  GP G   P + G P P+R
Sbjct: 628 GFPPGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPSR 674

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>PRP3_RAT (P04474) Acidic proline-rich protein PRP33 precursor (Proline-rich|
           proteoglycan 1)
          Length = 206

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 20/53 (37%), Positives = 24/53 (45%)
 Frame = +2

Query: 68  QGGRPAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPGGGTQSG 226
           Q G P GP  P G   G   P+P   +GP  +  P Q  PQP +  G   Q G
Sbjct: 109 QPGNPQGPP-PQGGPQG--PPQPGNPQGPPPQGGPQQRPPQPGKPQGPPPQGG 158

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>MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding|
           protein MBD2) (Demethylase) (DMTase)
          Length = 411

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 19/42 (45%), Positives = 20/42 (47%)
 Frame = -2

Query: 204 GRRAGCGTPCTGRARPRGPLVGHGRGRSQP*SIPSGCSGPAG 79
           GR  G      GR R RG   G GRGR +P S  SG  G  G
Sbjct: 68  GRGGGVCGRGRGRGRGRGRGRGRGRGRGRPPSGGSGLGGDGG 109

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>RTN1_RAT (Q64548) Reticulon-1 (Neuroendocrine-specific protein) (S-rex)|
          Length = 777

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 583 SPPPSMETKQVNLQAVPERSTNSSSPALLVG 675
           SPP +MET    + AVP+   +SSSP L  G
Sbjct: 68  SPPVAMETASTGVAAVPDALDHSSSPTLKDG 98

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>RLUB_XANCP (Q8P8M6) Ribosomal large subunit pseudouridine synthase B (EC|
           5.4.99.-) (rRNA-uridine isomerase B) (rRNA
           pseudouridylate synthase B)
          Length = 492

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 23/62 (37%), Positives = 29/62 (46%)
 Frame = +2

Query: 80  PAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPGGGTQSGGWTQAELKAAA 259
           P+G  +      G  +PRP+  +GP G ARP  G  Q     GG  QS G  Q + K   
Sbjct: 397 PSGHRNAGPGGAGTGQPRPYAKKGP-GGARPGAG-GQGRGAAGGQGQSQGQGQGQRKHPY 454

Query: 260 GH 265
           GH
Sbjct: 455 GH 456

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>SLAP_BACCI (P35824) S-layer-related protein precursor|
          Length = 1616

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
 Frame = -1

Query: 310  PSACPRVSTGVPAPEVS------SRRFEFRLRPAAAL--GSTT--GPARGLRYTLHRTGS 161
            P   PR  +    PE S      S R   R RP +A   G  T   P R    TLH TG 
Sbjct: 1394 PLTAPRRWSWTRPPECSASCPPASNRPGARRRPLSATEAGGPTRWSPPRSASPTLHPTGR 1453

Query: 160  SEGPSCWPWS 131
            +   SCWP S
Sbjct: 1454 ARMSSCWPRS 1463

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>COCA1_CHICK (P13944) Collagen alpha-1(XII) chain precursor (Fibrochimerin)|
          Length = 3124

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
 Frame = -2

Query: 267  KCPAAALSSACVQPPLWVP-PPGRRAGCGTP-------CTGRARPRGPLVGHGRGRSQP* 112
            KCPA   +  C Q  +  P PPG   G G          TG + P GP     RG + P 
Sbjct: 2735 KCPALPNACTCTQDSVGPPGPPGPPGGPGAKGPRGERGLTGSSGPPGP-----RGETGPP 2789

Query: 111  SIPSGCSGPAG 79
              P G  GP G
Sbjct: 2790 G-PQGPPGPQG 2799

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>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
 Frame = +2

Query: 77  RPAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPG-------GGTQSGG 229
           RPA    P G       PRP P +G   R  P QG P+P   PG       GG + GG
Sbjct: 193 RPAARPGPGG-------PRPGPAQGG-PRPGPGQGAPRPGATPGPRPAAAQGGPRPGG 242

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>NET1_YEAST (P47035) Nucleolar protein NET1|
          Length = 1189

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 21/75 (28%), Positives = 31/75 (41%)
 Frame = +3

Query: 381 KTDSRNPGPVLRPARGVLKLTRPATPGRKKKDLCVRCGVEPAESHSGTAEEEDGSETDLV 560
           K D RN  P   P R   K       G KK ++  +   + + + S   E E G ETD  
Sbjct: 665 KPDPRNILPQRTP-RSAAKRAAQLLAGAKKNEVPQKSTEDSSSAASTDDESESGIETDFS 723

Query: 561 EDDSMTGESAAIHGN 605
            DD    ++ ++  N
Sbjct: 724 SDDDFKRKNMSVPNN 738

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>TPA_BOVIN (Q28198) Tissue-type plasminogen activator precursor (EC 3.4.21.68)|
           (tPA) (t-PA) (t-plasminogen activator) [Contains:
           Tissue-type plasminogen activator chain A; Tissue-type
           plasminogen activator chain B]
          Length = 566

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
 Frame = -1

Query: 193 GLRYTLHRTGSSEGPSCWPWSRPISTMIHPVRMLRTRWPSSL----LMKEKNCRHPXG 32
           GL Y   R+ +  G SC PW+    T       + T W S+     L K  +CR+P G
Sbjct: 224 GLAYRGTRSHTKSGASCLPWNSVFLT-----SKIYTAWKSNAPALGLGKHNHCRNPDG 276

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>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 779

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
 Frame = -2

Query: 261 PAAALSSACVQPPL-WVP-------PPGRRAGCGTPCTGRARPRGPLVGHGRGRSQP*SI 106
           P   LS   V+PPL W P       PP  R G  +   G   PR P +     R+Q   +
Sbjct: 269 PHTPLSRIDVRPPLDWGPQRQTLSRPPIPRRGPFSEAGGGRPPRSPQLRTPEHRTQSTQV 328

Query: 105 PSGCSGPAGLPPCS*RRRTAAILXGG 28
            SG S    LPP     + + IL  G
Sbjct: 329 SSGSSTYLQLPPRPPGTQASMILLPG 354

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>SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)|
          Length = 415

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 20/68 (29%), Positives = 27/68 (39%)
 Frame = +2

Query: 2   RRQTCSRRRPPXRMAAVLLLHEQGGRPAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQG 181
           R+ + S + PP    A     ++ G P  P  P G      +  P P  GP    +P   
Sbjct: 293 RQTSVSGQAPPKASGAPPSGQQRQGPPQKPPGPAGPTRQASQAGPMPRTGPPTTQQPRPS 352

Query: 182 VPQPARRP 205
            P PA RP
Sbjct: 353 GPGPAGRP 360

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>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 24/78 (30%), Positives = 27/78 (34%), Gaps = 25/78 (32%)
 Frame = +2

Query: 71  GGRPAGPEHPDGMDHG*DRP-----------------------RPWPTRGPLGRARPVQG 181
           G RP+GP    G   G  RP                        P+ + G  G ARP   
Sbjct: 178 GARPSGPGQDRGQQGGQGRPGGQRPGAPAQRPGGRPGGPRPGNNPFTSGGNAGMARPSAP 237

Query: 182 VPQPARRPG--GGTQSGG 229
            PQ   RPG  GG   GG
Sbjct: 238 RPQGGPRPGGPGGAPGGG 255

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>LIMD1_MOUSE (Q9QXD8) LIM domains-containing protein 1|
          Length = 668

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
 Frame = -1

Query: 313 VPSACPRVSTGVPAPEVSSRRFEFRLRPAA--------ALGSTTGPARGLRYTLH-RTGS 161
           VP+  P ++T   A + S    E R+RP+A          GS  GP    R  LH  + S
Sbjct: 103 VPTVAPGLATTTAAAQPSYPSQEQRIRPSAHGARPGSQNCGSREGPVSSQRPALHGLSPS 162

Query: 160 SEGPSC 143
            E PSC
Sbjct: 163 CEDPSC 168

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>TRIB1_HUMAN (Q96RU8) Tribbles homolog 1 (TRB-1) (SKIP1) (G-protein-coupled|
           receptor induced protein 2) (GIG-2)
          Length = 372

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -2

Query: 267 KCPAAALSSACVQPPLWVPPPGRRAGCGTPCTGRARPRGPLVGHGRG 127
           KCP     S C  PP ++ PPG      +PC+ +  P  P  G G G
Sbjct: 46  KCPRL---SECSSPPDYLSPPG------SPCSPQPPPAAPGAGGGSG 83

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>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase|
           (EC 2.7.11.1) (Aortic preferentially expressed protein
           1) (APEG-1)
          Length = 3262

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = -2

Query: 261 PAAALSSACVQPPLWVPPPGRRAGCGTPCTGRARPRGPLVGHGRGRSQP 115
           P+   +S  V P    PPP   AG      GR R RGP+     GR++P
Sbjct: 544 PSTPKTSRAVSPAATQPPPPSGAGKSGDEPGRPRSRGPV-----GRTEP 587

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>RSMB_RAT (P17136) Small nuclear ribonucleoprotein-associated protein B|
           (snRNP-B) (Sm protein B) (Sm-B) (SmB) (SM11) (Fragment)
          Length = 214

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
 Frame = -2

Query: 258 AAALSSACVQPPLWVPPPGRRAGCGTPCTGRARP----RGPLVGHGRGRSQP*SIPSGCS 91
           AAA ++A +       PPGR  G   P  GR  P     GP  G       P  IP G  
Sbjct: 136 AAAAATASIAGAPTQYPPGR--GGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRG 193

Query: 90  GPAGLPP 70
            P G+PP
Sbjct: 194 TPMGMPP 200

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>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
 Frame = +2

Query: 65  EQGGRP-AGPEHPDGMDHG*DRPRPWP-TRGPLGRARPVQ--GVPQPARRPGGGTQSGG 229
           E   +P A    P GM     +P P P  R P     P    G  +PA RPGGG + GG
Sbjct: 171 EPAAKPGAEAPRPGGMPRPMGKPAPKPGARAPRVANNPFSTGGGERPAPRPGGGPRPGG 229

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>GPC2_HUMAN (Q8N158) Glypican-2 precursor|
          Length = 579

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 24/76 (31%), Positives = 29/76 (38%)
 Frame = +2

Query: 2   RRQTCSRRRPPXRMAAVLLLHEQGGRPAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQG 181
           RR+    R    RM    L H+  G+ A  E   G   G      W        ARP + 
Sbjct: 468 RRRRLQLRAATARMKTAALGHDLDGQDAD-EDASGSGGGQQYADDWMAGAVAPPARPPRP 526

Query: 182 VPQPARRPGGGTQSGG 229
            P P RR G G + GG
Sbjct: 527 -PYPPRRDGSGGKGGG 541

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>ATX1_HUMAN (P54253) Ataxin-1 (Spinocerebellar ataxia type 1 protein)|
          Length = 816

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 13/55 (23%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
 Frame = +1

Query: 502 QRSRTAERPRRKTDRRRILSRTT--L*PASPPPSMETKQVNLQAVPERSTNSSSP 660
           Q  +  ++ +++  +++ LSR    + P SPPP+ + + V++ + P+ +  ++SP
Sbjct: 210 QHQQQQQQQQQQQQQQQHLSRAPGLITPGSPPPAQQNQYVHISSSPQNTGRTASP 264

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>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 925

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 21/50 (42%), Positives = 21/50 (42%), Gaps = 7/50 (14%)
 Frame = +2

Query: 71  GGRPAGPEHPDGMDH---G*DRPRPWPTRGPLGRARPV----QGVPQPAR 199
           G  P GP  P GM H   G   P P P  GP G   PV     G P P R
Sbjct: 628 GFPPGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPGGPVGPRLLGPPPPPR 677

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>CO2A1_CHICK (P02460) Collagen alpha-1(II) chain precursor (Fragment)|
          Length = 369

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 4/65 (6%)
 Frame = +2

Query: 80  PAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPGG----GTQSGGWTQAEL 247
           P GP  P G D     P P    GP GR+    G P PA  PG     G      T  ++
Sbjct: 47  PPGPVGPSGKDGSNGMPGPIGPPGPRGRS----GEPGPAGPPGNPGPPGPPGPPGTGIDM 102

Query: 248 KAAAG 262
            A AG
Sbjct: 103 SAFAG 107

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>RSMB_HUMAN (P14678) Small nuclear ribonucleoprotein-associated proteins B and|
           B' (snRNP-B) (Sm protein B/B') (Sm-B/Sm-B') (SmB/SmB')
          Length = 240

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
 Frame = -2

Query: 258 AAALSSACVQPPLWVPPPGRRAGCGTPCTGRARP----RGPLVGHGRGRSQP*SIPSGCS 91
           AAA ++A +       PPGR  G   P  GR  P     GP  G       P  IP G  
Sbjct: 153 AAAAATASIAGAPTQYPPGR--GGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRG 210

Query: 90  GPAGLPP 70
            P G+PP
Sbjct: 211 TPMGMPP 217

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>RSMB_ERIEU (Q9TU67) Small nuclear ribonucleoprotein-associated protein B'|
           (snRNP-B') (Sm protein B') (Sm-B') (SmB') (snRPB')
          Length = 240

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
 Frame = -2

Query: 258 AAALSSACVQPPLWVPPPGRRAGCGTPCTGRARP----RGPLVGHGRGRSQP*SIPSGCS 91
           AAA ++A +       PPGR  G   P  GR  P     GP  G       P  IP G  
Sbjct: 153 AAAAATASIAGAPTQYPPGR--GGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRG 210

Query: 90  GPAGLPP 70
            P G+PP
Sbjct: 211 TPMGMPP 217

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>PRP2_MOUSE (P05142) Proline-rich protein MP-2 precursor|
          Length = 261

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = +2

Query: 80  PAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPGG 211
           PAGP+           P+P PT+GP     P Q  PQ    PGG
Sbjct: 167 PAGPQPRPPQGPPTTGPQPRPTQGPPPTGGPQQQPPQGPPPPGG 210

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>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 940

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = +2

Query: 71  GGRPAGPEHPDGMDH---G*DRPRPWPTRGPLGRARP-VQGVPQPAR 199
           G  P GP  P GM H   G   P P P  GP G   P + G P P R
Sbjct: 628 GFPPGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPR 674

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>PP1RA_MACMU (Q5TM61) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
          Length = 940

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = +2

Query: 71  GGRPAGPEHPDGMDH---G*DRPRPWPTRGPLGRARP-VQGVPQPAR 199
           G  P GP  P GM H   G   P P P  GP G   P + G P P R
Sbjct: 628 GFPPGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPR 674

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>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (MHC class
           I region proline-rich protein CAT53) (FB19 protein)
           (PP1-binding protein of 114 kDa) (p99)
          Length = 940

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = +2

Query: 71  GGRPAGPEHPDGMDH---G*DRPRPWPTRGPLGRARP-VQGVPQPAR 199
           G  P GP  P GM H   G   P P P  GP G   P + G P P R
Sbjct: 628 GFPPGGPGGPKGMQHFPPGPGGPMPGPHGGPGGPVGPRLLGPPPPPR 674

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>TOP3_CAEEL (O61660) DNA topoisomerase 3 (EC 5.99.1.2) (DNA topoisomerase III)|
          Length = 759

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 17/41 (41%), Positives = 20/41 (48%)
 Frame = -2

Query: 192 GCGTPCTGRARPRGPLVGHGRGRSQP*SIPSGCSGPAGLPP 70
           G G P  G   PRGP  G G G + P + P   + P G PP
Sbjct: 617 GPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPP 657

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>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 77  RPAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPGG 211
           RPA P+   G+  G   PRP P  GP    RP  G  +  ++P G
Sbjct: 94  RPAVPKPGPGLKPG---PRPVPKPGPRPGPRPEGGAGKAGQQPSG 135



 Score = 29.6 bits (65), Expect = 8.7
 Identities = 22/58 (37%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
 Frame = +2

Query: 71  GGRPA----GPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGV-PQPARRPGGGTQSGG 229
           GGRP     GP  P         PRP P   P  R  P  G  P  + R GGG   GG
Sbjct: 228 GGRPGSSAGGPPRPVPRPG----PRPSPMNMPASRPTPPGGARPSTSSRSGGGRGRGG 281

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>CSP_PLABA (P23093) Circumsporozoite protein precursor (CS)|
          Length = 347

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = +2

Query: 80  PAGPEHPDGMDHG*DRPRPWPTRGPLGRARP---VQGVPQPARRPGGGTQS 223
           P  P  P G ++   +PRP P   P  + +P    Q  PQP  +PGG   +
Sbjct: 202 PNDPAPPQGNNNPQPQPRPQPQPQPQPQPQPQPQPQPRPQPQPQPGGNNNN 252

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>REXO4_NEUCR (Q7S9B7) RNA exonuclease 4 (EC 3.1.-.-)|
          Length = 406

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
 Frame = +1

Query: 499 SQRSRTAERPRRKTDRRRILSRTTL*PASPPPSMETKQVNLQAVPERST--NSSSPAL 666
           SQ+ + A  P +K  R++  S+T   P+S  P+ E    N+Q+ P  S+  NS+ P+L
Sbjct: 54  SQQQQQASNPSKKPKRQK--SQTQSQPSSQKPTEEKMGGNVQSKPTTSSSPNSTLPSL 109

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>PSIP1_RAT (Q812D1) PC4 and SFRS1-interacting protein (Lens epithelium-derived|
           growth factor)
          Length = 528

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
 Frame = +3

Query: 132 DHGQQEGPSDEPVLCKVYRSPRAGPVVEPKAAA-GRKRNSKRRLDTSGAG 278
           D  Q+E  S+E V        +A  +  PKAA  GRKR +++++DT  AG
Sbjct: 121 DTDQEEKASNEDVT-------KAADITTPKAARRGRKRKAEKQVDTEEAG 163

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>PKHA4_MOUSE (Q8VC98) Pleckstrin homology domain-containing family A member 4|
           (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1)
          Length = 588

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 28/86 (32%), Positives = 33/86 (38%), Gaps = 8/86 (9%)
 Frame = -2

Query: 261 PAAALSSACVQPPL-WVP-------PPGRRAGCGTPCTGRARPRGPLVGHGRGRSQP*SI 106
           P   LS   V+PPL W P       PP  R G  +   G   PR P       R+Q    
Sbjct: 269 PHTPLSRIDVRPPLDWGPQRQTLSRPPIPRRGPSSEAGGERPPRSPQPRTPEQRTQSTQA 328

Query: 105 PSGCSGPAGLPPCS*RRRTAAILXGG 28
            SG S    LPP     + + IL  G
Sbjct: 329 TSGSSTYLQLPPRPPGTQASMILLPG 354

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>MUTL_CHLTE (Q8KAX3) DNA mismatch repair protein mutL|
          Length = 624

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 24/58 (41%), Positives = 28/58 (48%)
 Frame = -1

Query: 319 FLVPSACPRVSTGVPAPEVSSRRFEFRLRPAAALGSTTGPARGLRYTLHRTGSSEGPS 146
           F  PSA P VS  V  PEVSSR+  +      A  STTG      Y  +R G+   PS
Sbjct: 336 FAAPSA-PTVSGEVDLPEVSSRKLSYSSFSGKA--STTGDL----YRNYRAGAFSAPS 386

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>ANDR_PIG (Q9GKL7) Androgen receptor (Dihydrotestosterone receptor)|
          Length = 896

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = -2

Query: 261 PAAALSSACVQPPLWVPPPGRRAGCGTPCTGRARPRGPLVGHGRGRS 121
           P   L   C+  PL   PP  R    TPC   A  +G L+  G G+S
Sbjct: 249 PGEQLRGDCMYAPLLTGPPSVRP---TPCAPLAECKGSLLDDGPGKS 292

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>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 19/49 (38%), Positives = 20/49 (40%)
 Frame = +2

Query: 80   PAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPGGGTQSG 226
            P G   P G   G   P P   RGP G   PV G P P   PG   + G
Sbjct: 894  PTGKPGPKGTSGGDGPPGPPGERGPQGPQGPV-GFPGPKGPPGPAGKDG 941

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>CSP_PLABE (P06915) Circumsporozoite protein precursor (CS)|
          Length = 339

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = +2

Query: 80  PAGPEHPDGMDHG*DRPRPWPTRGPLGRARP---VQGVPQPARRPGGGTQS 223
           P  P  P G ++   +PRP P   P  + +P    Q  PQP  +PGG   +
Sbjct: 194 PNDPAPPQGNNNPQPQPRPQPQPQPQPQPQPQPQPQPRPQPQPQPGGNNNN 244

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>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)|
           (Trinucleotide repeat-containing gene 13 protein)
          Length = 1312

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
 Frame = +2

Query: 29  PPXRMAAVLL-LHEQGGRPAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRP 205
           PP     VLL L   G  PA P     +       R  P R  +  ARP  G P+PA  P
Sbjct: 100 PPRPFVVVLLPLASPGAPPAAPTRASPLG-----ARASPPRSGVSLARPAPGCPRPACEP 154

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>MBD2_MOUSE (Q9Z2E1) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding|
           protein MBD2)
          Length = 414

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = -2

Query: 171 GRARPRGPLVGHGRGRSQP*SIPSGCSGPAG 79
           GR R RG   G GRGR +P S  SG  G  G
Sbjct: 79  GRGRGRGRGRGRGRGRGRPQSGGSGLGGDGG 109

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>GLR35_ARATH (Q9SW97) Glutamate receptor 3.5 precursor (Ligand-gated ion channel|
           3.5) (Ionotropic glutamate receptor GLR6)
          Length = 953

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 18/68 (26%), Positives = 30/68 (44%)
 Frame = -1

Query: 211 TTGPARGLRYTLHRTGSSEGPSCWPWSRPISTMIHPVRMLRTRWPSSLLMKEKNCRHPXG 32
           +TGP R + Y  + TG S  P    +S+P +T     R+    WP  ++   +    P  
Sbjct: 425 STGPLR-VGYWSNHTGFSVAPPETLYSKPSNTSAKDQRLNEIIWPGEVIKPPRGWVFPEN 483

Query: 31  WSPSRTGL 8
             P + G+
Sbjct: 484 GKPLKIGV 491

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>RSMB_MOUSE (P27048) Small nuclear ribonucleoprotein-associated protein B|
           (snRNP-B) (Sm protein B) (Sm-B) (SmB)
          Length = 231

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
 Frame = -2

Query: 258 AAALSSACVQPPLWVPPPGRRAGCGTPCTGRARP----RGPLVGHGRGRSQP*SIPSGCS 91
           AAA ++A +       PPGR  G   P  GR  P     GP  G       P  +P G  
Sbjct: 153 AAAAATASIAGAPTQYPPGR--GGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGLPPGRG 210

Query: 90  GPAGLPP 70
            P G+PP
Sbjct: 211 TPMGMPP 217

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>CTPI_MYCTU (Q10900) Probable cation-transporting ATPase I (EC 3.6.3.-)|
          Length = 1625

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -3

Query: 206 RAGARAAVHLAQDGLVRGALLLAMVEADLNHDPS 105
           RA + +AVHLAQ G     LLL   E D   +P+
Sbjct: 635 RAASESAVHLAQGGTTLAGLLLVTGEQDKTTNPA 668

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>SMR1_MOUSE (Q61900) Submaxillary gland androgen-regulated protein 1 precursor|
           (Salivary protein MSG1)
          Length = 147

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 19/53 (35%), Positives = 19/53 (35%)
 Frame = -2

Query: 225 PLWVPPPGRRAGCGTPCTGRARPRGPLVGHGRGRSQP*SIPSGCSGPAGLPPC 67
           P   PPP    G G       RP  P  G G GR  P     G   P   PPC
Sbjct: 34  PFPPPPPPHGPGIG-------RPHPPPFGPGIGRPPPPPFGPGIGRPPPPPPC 79

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>ATX1_RAT (Q63540) Ataxin-1 (Spinocerebellar ataxia type 1 protein homolog)|
          Length = 789

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +1

Query: 577 PASPPPSMETKQVNLQAVPERSTNSSSPALLV 672
           P SPPP+ + + +++ + P+ S  ++SP + V
Sbjct: 211 PGSPPPTQQNQYIHISSSPQSSGRATSPPIPV 242

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>PMP3_MOUSE (P05143) Proline-rich protein MP-3 (Fragment)|
          Length = 296

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 18/47 (38%), Positives = 20/47 (42%)
 Frame = +2

Query: 80  PAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPGGGTQ 220
           P GP  P G       P+P P +GP     P Q  PQ    PGG  Q
Sbjct: 84  PQGPPPPGG-------PQPRPPQGPPPPGGPQQRPPQGPPPPGGPQQ 123

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>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)|
          Length = 1262

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 20/49 (40%), Positives = 23/49 (46%)
 Frame = +2

Query: 80  PAGPEHPDGMDHG*DRPRPWPTRGPLGRARPVQGVPQPARRPGGGTQSG 226
           PAGP    G       P P  +RG  G  R  QG+P PA  PG   Q+G
Sbjct: 771 PAGPPGDKGETGPAGAPGPAGSRGGPGE-RGEQGLPGPAGFPGAPGQNG 818

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>CI040_MOUSE (Q8VCE4) Protein C9orf40 homolog|
          Length = 163

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
 Frame = -2

Query: 249 LSSACVQPPLWVPPPG------RRAGCGTPCTGRARPRGPLVGHGRGRSQP*SIPSGCSG 88
           LS    +PPLWVPP G      R+   G      + PR       RG         GCS 
Sbjct: 21  LSDFPEEPPLWVPPSGTARPLKRQGDAGIMAEPASAPR-----KRRGGGDDRQELQGCSR 75

Query: 87  PAGLPP 70
             G PP
Sbjct: 76  EPGEPP 81

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>URE11_STRCO (Q9FCD3) Urease alpha subunit 1 (EC 3.5.1.5) (Urea amidohydrolase|
           alpha subunit 1)
          Length = 573

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 21/70 (30%), Positives = 32/70 (45%)
 Frame = +3

Query: 459 GRKKKDLCVRCGVEPAESHSGTAEEEDGSETDLVEDDSMTGESAAIHGNEAGESSGGART 638
           G  K D+ +R G       +G  +  DG   DLV    +  E+  + GN    ++GG  T
Sbjct: 85  GIVKADIGIRDGRITGIGKAGNPDTMDGVHPDLV----IGPETEIVAGNGKIVTAGGIDT 140

Query: 639 FYQFV*PGAL 668
              F+ PGA+
Sbjct: 141 HVHFIAPGAV 150

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>HES1_RAT (Q04666) Transcription factor HES-1 (Hairy and enhancer of split 1)|
           (Hairy-like) (RHL)
          Length = 281

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 19/54 (35%), Positives = 21/54 (38%)
 Frame = -2

Query: 228 PPLWVPPPGRRAGCGTPCTGRARPRGPLVGHGRGRSQP*SIPSGCSGPAGLPPC 67
           P L  PPP   +G G P      P  PLV           IP G + P G  PC
Sbjct: 161 PALQAPPPPPPSGPGGPQHAPFAPPPPLV----------PIPGGAAPPPGSAPC 204

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>KDC2_DROME (P16912) Protein kinase DC2 (EC 2.7.11.1)|
          Length = 583

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +3

Query: 516 SGTAEEEDGSETDLVEDDSMTGESAAI 596
           S + EE+DG+ETD  EDD  + ES+++
Sbjct: 234 SESIEEDDGNETDDEEDDDESEESSSV 260

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>PRB3_HUMAN (Q04118) Basic salivary proline-rich protein 3 precursor (Parotid|
           salivary glycoprotein G1) (Proline-rich protein G1)
          Length = 309

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 6/73 (8%)
 Frame = +2

Query: 62  HEQGGRPAGPEHPDGM-DHG*DRPR-----PWPTRGPLGRARPVQGVPQPARRPGGGTQS 223
           ++  G P  P  P+G    G ++PR     P   +GP  +       P P RRP G    
Sbjct: 213 NQSQGPPPRPGKPEGSPSQGGNKPRGPPPHPGKPQGPPPQEGNKPQRPPPPRRPQGPPPP 272

Query: 224 GGWTQAELKAAAG 262
           GG  Q  L   AG
Sbjct: 273 GGNPQQPLPPPAG 285

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>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 18/49 (36%), Positives = 20/49 (40%)
 Frame = +3

Query: 138  GQQEGPSDEPVLCKVYRSPRAGPVVEPKAAAGRKRNSKRRLDTSGAGTP 284
            G +E P  +P L     SP AG    P        N    L TSGA TP
Sbjct: 2134 GGREPPKPKPSLSSHPTSPTAGQEPGPHPQGSGSVNGSPLLSTSGASTP 2182


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,146,816
Number of Sequences: 219361
Number of extensions: 2198541
Number of successful extensions: 9320
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 7954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9263
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6598423128
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result