ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal41a14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100759.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 2e-50
2dbj|AK058211.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 2e-50
3gb|AY105032.1| Zea mays PCO143982 mRNA sequence 200 4e-48
4gb|BT017717.1| Zea mays clone EL01N0447A02.c mRNA sequence 192 9e-46
5gb|BT017618.1| Zea mays clone EL01N0434H04.c mRNA sequence 155 2e-34
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
7dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
8dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic D... 119 1e-23
9dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.034
10dbj|AP004678.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.034
11gb|AE006198.1| Pasteurella multocida subsp. multocida str. Pm70 ... 46 0.14
12emb|AL356983.33| Human DNA sequence from clone RP3-441G21 on chr... 44 0.54
13gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic... 42 2.1
14emb|AL121985.13|HSA404F10 Human DNA sequence from clone RP11-404... 42 2.1
15emb|AL049757.14|HSDJ47A17 Human DNA sequence from clone RP1-47A1... 42 2.1
16emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encodi... 42 2.1
17ref|NM_017436.4| Homo sapiens alpha 1,4-galactosyltransferase (g... 42 2.1
18dbj|AK130208.1| Homo sapiens cDNA FLJ26698 fis, clone PCD00988 42 2.1
19gb|AY893878.1| Synthetic construct Homo sapiens clone FLH127889.... 42 2.1
20gb|AY893430.1| Synthetic construct Homo sapiens clone FLH127799.... 42 2.1
21gb|AC004228.2|AC004228 Homo sapiens Chromosome 11q12.2 PAC clone... 42 2.1
22dbj|AP002380.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.1
23gb|AC004770.1|AC004770 Homo sapiens chromosome 11, BAC CIT-HSP-3... 42 2.1
24gb|U73629.1|HSU73629 Human chromosome 11 114g8 cosmid, complete ... 42 2.1
25gb|AY644454.1| Fibropapilloma-associated turtle herpesvirus uniq... 40 8.4
26gb|AY646915.1| Fibropapilloma-associated turtle herpesvirus stra... 40 8.4
27gb|AY646914.1| Fibropapilloma-associated turtle herpesvirus stra... 40 8.4
28gb|AY646913.1| Fibropapilloma-associated turtle herpesvirus stra... 40 8.4
29gb|AY646912.1| Fibropapilloma-associated turtle herpesvirus stra... 40 8.4
30gb|AY646910.1| Fibropapilloma-associated turtle herpesvirus stra... 40 8.4
31gb|AY646909.1| Fibropapilloma-associated turtle herpesvirus stra... 40 8.4
32ref|XM_369574.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 8.4
33gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.4
34dbj|AK202064.1| Mus musculus cDNA, clone:Y1G0140E10, strand:plus... 40 8.4
35dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 8.4
36gb|AY941797.1| Homo sapiens alpha 1,4-galactosyltransferase (A4G... 40 8.4
37dbj|AP004371.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.4 
>dbj|AK100759.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119B10, full
           insert sequence
          Length = 1847

 Score =  208 bits (105), Expect = 2e-50
 Identities = 177/201 (88%)
 Strand = Plus / Plus

                                                                       
Query: 81  gaggaaggggaagtcgtgcaagggctgcctgtactactcgtcggtgctcaaatcccgggg 140
           ||||| |||||| || |||||||||||||| |||||||||||  |||||| |||||| ||
Sbjct: 110 gaggagggggaaatcctgcaagggctgcctctactactcgtccatgctcagatcccgcgg 169

                                                                       
Query: 141 atacaaccccatctgcgtggggatccctcgctccatcccccaagtcccgggcttcgtggt 200
           || ||||||| |||||||||||||||| ||||||||||||||||||||  ||| ||||||
Sbjct: 170 attcaaccccgtctgcgtggggatcccgcgctccatcccccaagtcccaagctacgtggt 229

                                                                       
Query: 201 ggaagagcctagggaggaggtcgcggcgcaggggcatgatctgagacagttcaaatacgc 260
           ||| ||||| || || ||||  |||||||||||||||||| |||| |||||||| |||||
Sbjct: 230 ggacgagcccagagaagaggcggcggcgcaggggcatgatttgaggcagttcaagtacgc 289

                                
Query: 261 ctgcgccggttactccatgtt 281
           |||||| ||||||||||||||
Sbjct: 290 ctgcgctggttactccatgtt 310
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>dbj|AK058211.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-C06, full
           insert sequence
          Length = 930

 Score =  208 bits (105), Expect = 2e-50
 Identities = 177/201 (88%)
 Strand = Plus / Plus

                                                                       
Query: 81  gaggaaggggaagtcgtgcaagggctgcctgtactactcgtcggtgctcaaatcccgggg 140
           ||||| |||||| || |||||||||||||| |||||||||||  |||||| |||||| ||
Sbjct: 100 gaggagggggaaatcctgcaagggctgcctctactactcgtccatgctcagatcccgcgg 159

                                                                       
Query: 141 atacaaccccatctgcgtggggatccctcgctccatcccccaagtcccgggcttcgtggt 200
           || ||||||| |||||||||||||||| ||||||||||||||||||||  ||| ||||||
Sbjct: 160 attcaaccccgtctgcgtggggatcccgcgctccatcccccaagtcccaagctacgtggt 219

                                                                       
Query: 201 ggaagagcctagggaggaggtcgcggcgcaggggcatgatctgagacagttcaaatacgc 260
           ||| ||||| || || ||||  |||||||||||||||||| |||| |||||||| |||||
Sbjct: 220 ggacgagcccagagaagaggcggcggcgcaggggcatgatttgaggcagttcaagtacgc 279

                                
Query: 261 ctgcgccggttactccatgtt 281
           |||||| ||||||||||||||
Sbjct: 280 ctgcgctggttactccatgtt 300
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>gb|AY105032.1| Zea mays PCO143982 mRNA sequence
          Length = 1025

 Score =  200 bits (101), Expect = 4e-48
 Identities = 233/277 (84%)
 Strand = Plus / Plus

                                                                       
Query: 13  gagatgggggaggcatcgccggagtccagcggcgcggcggccggagggccgtctatcccg 72
           ||||||| ||||||||||||||||||| ||| ||||||| |||||||  | ||||   ||
Sbjct: 77  gagatggtggaggcatcgccggagtccggcgccgcggcgaccggaggtgcctctagtacg 136

                                                                       
Query: 73  gggccgctgaggaaggggaagtcgtgcaagggctgcctgtactactcgtcggtgctcaaa 132
           | | || || ||||||||||||| |||||||||||||| ||||||||||| |||||||| 
Sbjct: 137 gcggcggtgcggaaggggaagtcatgcaagggctgcctctactactcgtcagtgctcaag 196

                                                                       
Query: 133 tcccggggatacaaccccatctgcgtggggatccctcgctccatcccccaagtcccgggc 192
           ||||| || |||||||| |||||||| |||||||| ||||||||||||||||| ||   |
Sbjct: 197 tcccgcggttacaacccaatctgcgttgggatcccccgctccatcccccaagttcctaac 256

                                                                       
Query: 193 ttcgtggtggaagagcctagggaggaggtcgcggcgcaggggcatgatctgagacagttc 252
           | ||||||||| || |||| ||||||||   |||||||||||||||| || || | ||||
Sbjct: 257 tacgtggtggatgaacctaaggaggaggcgacggcgcaggggcatgacctcaggcggttc 316

                                                
Query: 253 aaatacgcctgcgccggttactccatgttcgtcgaca 289
           |  ||||  ||||| ||||||||||||||||| ||||
Sbjct: 317 aggtacgggtgcgcgggttactccatgttcgtggaca 353
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>gb|BT017717.1| Zea mays clone EL01N0447A02.c mRNA sequence
          Length = 895

 Score =  192 bits (97), Expect = 9e-46
 Identities = 232/277 (83%)
 Strand = Plus / Plus

                                                                       
Query: 13  gagatgggggaggcatcgccggagtccagcggcgcggcggccggagggccgtctatcccg 72
           ||||||| ||||||||||||||||||| ||| ||||||| |||||||  | ||||   ||
Sbjct: 47  gagatggtggaggcatcgccggagtccggcgccgcggcgaccggaggtgcctctagtacg 106

                                                                       
Query: 73  gggccgctgaggaaggggaagtcgtgcaagggctgcctgtactactcgtcggtgctcaaa 132
           | | || || ||||||||||||| |||||||||||||| ||||||||||| |||||||| 
Sbjct: 107 gcggcggtgcggaaggggaagtcatgcaagggctgcctctactactcgtcagtgctcaat 166

                                                                       
Query: 133 tcccggggatacaaccccatctgcgtggggatccctcgctccatcccccaagtcccgggc 192
           ||||| ||  ||||||| |||||||| |||||||| ||||||||||||||||| ||   |
Sbjct: 167 tcccgcggtgacaacccaatctgcgttgggatcccccgctccatcccccaagttcctaac 226

                                                                       
Query: 193 ttcgtggtggaagagcctagggaggaggtcgcggcgcaggggcatgatctgagacagttc 252
           | ||||||||| || |||| ||||||||   |||||||||||||||| || || | ||||
Sbjct: 227 tacgtggtggatgaacctaaggaggaggcgacggcgcaggggcatgacctcaggcggttc 286

                                                
Query: 253 aaatacgcctgcgccggttactccatgttcgtcgaca 289
           |  ||||  ||||| ||||||||||||||||| ||||
Sbjct: 287 aggtacgggtgcgcgggttactccatgttcgtggaca 323
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>gb|BT017618.1| Zea mays clone EL01N0434H04.c mRNA sequence
          Length = 995

 Score =  155 bits (78), Expect = 2e-34
 Identities = 171/202 (84%)
 Strand = Plus / Plus

                                                                       
Query: 83  ggaaggggaagtcgtgcaagggctgcctgtactactcgtcggtgctcaaatcccggggat 142
           |||||||||||||||||||||||||||| || |||||||| |||||||| ||||| || |
Sbjct: 140 ggaaggggaagtcgtgcaagggctgcctttagtactcgtcagtgctcaagtcccgcggct 199

                                                                       
Query: 143 acaaccccatctgcgtggggatccctcgctccatcccccaagtcccgggcttcgtggtgg 202
           ||||||| |||||||| |||||||| || |||||||||||||| ||   || ||||||||
Sbjct: 200 acaacccaatctgcgttgggatcccccgttccatcccccaagttcctaactacgtggtgg 259

                                                                       
Query: 203 aagagcctagggaggaggtcgcggcgcaggggcatgatctgagacagttcaaatacgcct 262
           | ||||||| |||||| |   | ||||||||||||||||| || | |||||  ||||  |
Sbjct: 260 atgagcctaaggaggacgcgacagcgcaggggcatgatctcaggcggttcaggtacgggt 319

                                 
Query: 263 gcgccggttactccatgttcgt 284
           |||| ||||||||||| |||||
Sbjct: 320 gcgcgggttactccatattcgt 341
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                            
Query: 81       gaggaaggggaagtcgtgcaagggctgcctgtactactcgtcggtgctcaaatcccgggg 140
                ||||| |||||| || |||||||||||||| |||||||||||  |||||| |||||| ||
Sbjct: 20486255 gaggagggggaaatcctgcaagggctgcctctactactcgtccatgctcagatcccgcgg 20486314

                                                            
Query: 141      atacaaccccatctgcgtggggatccctcgctccatcccccaag 184
                || ||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 20486315 attcaaccccgtctgcgtggggatcccgcgctccatcccccaag 20486358



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Plus

                                                                            
Query: 195      cgtggtggaagagcctagggaggaggtcgcggcgcaggggcatgatctgagacagttcaa 254
                ||||||||| ||||| || || ||||  |||||||||||||||||| |||| ||||||||
Sbjct: 20486555 cgtggtggacgagcccagagaagaggcggcggcgcaggggcatgatttgaggcagttcaa 20486614

                                           
Query: 255      atacgcctgcgccggttactccatgtt 281
                 ||||||||||| ||||||||||||||
Sbjct: 20486615 gtacgcctgcgctggttactccatgtt 20486641
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>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OJ1254_E07
          Length = 124028

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                        
Query: 81   gaggaaggggaagtcgtgcaagggctgcctgtactactcgtcggtgctcaaatcccgggg 140
            ||||| |||||| || |||||||||||||| |||||||||||  |||||| |||||| ||
Sbjct: 3902 gaggagggggaaatcctgcaagggctgcctctactactcgtccatgctcagatcccgcgg 3961

                                                        
Query: 141  atacaaccccatctgcgtggggatccctcgctccatcccccaag 184
            || ||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 3962 attcaaccccgtctgcgtggggatcccgcgctccatcccccaag 4005



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Plus

                                                                        
Query: 195  cgtggtggaagagcctagggaggaggtcgcggcgcaggggcatgatctgagacagttcaa 254
            ||||||||| ||||| || || ||||  |||||||||||||||||| |||| ||||||||
Sbjct: 4202 cgtggtggacgagcccagagaagaggcggcggcgcaggggcatgatttgaggcagttcaa 4261

                                       
Query: 255  atacgcctgcgccggttactccatgtt 281
             ||||||||||| ||||||||||||||
Sbjct: 4262 gtacgcctgcgctggttactccatgtt 4288
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>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1531_B07
          Length = 115245

 Score =  119 bits (60), Expect = 1e-23
 Identities = 93/104 (89%)
 Strand = Plus / Plus

                                                                          
Query: 81     gaggaaggggaagtcgtgcaagggctgcctgtactactcgtcggtgctcaaatcccgggg 140
              ||||| |||||| || |||||||||||||| |||||||||||  |||||| |||||| ||
Sbjct: 114394 gaggagggggaaatcctgcaagggctgcctctactactcgtccatgctcagatcccgcgg 114453

                                                          
Query: 141    atacaaccccatctgcgtggggatccctcgctccatcccccaag 184
              || ||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 114454 attcaaccccgtctgcgtggggatcccgcgctccatcccccaag 114497



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Plus

                                                                          
Query: 195    cgtggtggaagagcctagggaggaggtcgcggcgcaggggcatgatctgagacagttcaa 254
              ||||||||| ||||| || || ||||  |||||||||||||||||| |||| ||||||||
Sbjct: 114694 cgtggtggacgagcccagagaagaggcggcggcgcaggggcatgatttgaggcagttcaa 114753

                                         
Query: 255    atacgcctgcgccggttactccatgtt 281
               ||||||||||| ||||||||||||||
Sbjct: 114754 gtacgcctgcgctggttactccatgtt 114780
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                        
Query: 84       gaaggggaagtcgtgcaagggctgcctgtactactcgtcg 123
                |||||||||||| |||||||||| ||| | ||||||||||
Sbjct: 29756676 gaaggggaagtcctgcaagggctacctcttctactcgtcg 29756637
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>dbj|AP004678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1136_F03
          Length = 110783

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 84    gaaggggaagtcgtgcaagggctgcctgtactactcgtcg 123
             |||||||||||| |||||||||| ||| | ||||||||||
Sbjct: 54806 gaaggggaagtcctgcaagggctacctcttctactcgtcg 54767
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>gb|AE006198.1| Pasteurella multocida subsp. multocida str. Pm70 section 165 of 204
            of the complete genome
          Length = 12956

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 248  agttcaaatacgcctgcgccggt 270
            |||||||||||||||||||||||
Sbjct: 9613 agttcaaatacgcctgcgccggt 9635
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>emb|AL356983.33| Human DNA sequence from clone RP3-441G21 on chromosome 6 Contains the
             ribosomal protein L12  (RPL12) pseudogene, complete
             sequence
          Length = 51923

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 499   ggctcctacatcaagcaaaacgtgga 524
             ||||||||||||||||||||| ||||
Sbjct: 33088 ggctcctacatcaagcaaaacttgga 33113
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>gb|AF040570.3| Amycolatopsis mediterranei rifamycin biosynthetic gene cluster
          Length = 109528

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 452   gcgccgggctggtcgcgtccg 472
             |||||||||||||||||||||
Sbjct: 58742 gcgccgggctggtcgcgtccg 58762
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>emb|AL121985.13|HSA404F10 Human DNA sequence from clone RP11-404F10 on chromosome 1q23.1-24.1
             Contains the 5' end of the SLAMF1 gene for signaling
             lymphocytic activation molecule family member 1, a SET
             translocation (myeloid leukemia-associated) (SET)
             pseudogene, a novel gene, the CD48 gene for CD48 antigen
             (B-cell membrane protein), the SLAMF7 gene for SLAM family
             member 7 and the 5' end of the LY9 gene for lymphocyte
             antigen 9, complete sequence
          Length = 195976

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 6     cacgagggagatgggggaggc 26
             |||||||||||||||||||||
Sbjct: 65350 cacgagggagatgggggaggc 65370
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>emb|AL049757.14|HSDJ47A17 Human DNA sequence from clone RP1-47A17 on chromosome 22q13.2-13.33,
             complete sequence
          Length = 105104

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 41    gcggcgcggcggccggagggc 61
             |||||||||||||||||||||
Sbjct: 22749 gcggcgcggcggccggagggc 22769
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>emb|AJ223012.1|AMM223012 Amycolatopsis mediterranei genes encoding rifamycin polyketide
             synthases, ORFs 1 to 5
          Length = 53784

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 452   gcgccgggctggtcgcgtccg 472
             |||||||||||||||||||||
Sbjct: 42337 gcgccgggctggtcgcgtccg 42357
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>ref|NM_017436.4| Homo sapiens alpha 1,4-galactosyltransferase
          (globotriaosylceramide synthase) (A4GALT), mRNA
          Length = 2106

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 41 gcggcgcggcggccggagggc 61
          |||||||||||||||||||||
Sbjct: 24 gcggcgcggcggccggagggc 4
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>dbj|AK130208.1| Homo sapiens cDNA FLJ26698 fis, clone PCD00988
          Length = 1380

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 41 gcggcgcggcggccggagggc 61
          |||||||||||||||||||||
Sbjct: 24 gcggcgcggcggccggagggc 4
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>gb|AY893878.1| Synthetic construct Homo sapiens clone FLH127889.01L flap
            structure-specific endonuclease 1 (FEN1) mRNA, complete
            cds
          Length = 1449

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 383  cccagcctcaggagcaaggac 403
            |||||||||||||||||||||
Sbjct: 1289 cccagcctcaggagcaaggac 1309
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>gb|AY893430.1| Synthetic construct Homo sapiens clone FLH127799.01X flap
            structure-specific endonuclease 1 (FEN1) mRNA, complete
            cds
          Length = 1449

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 383  cccagcctcaggagcaaggac 403
            |||||||||||||||||||||
Sbjct: 1289 cccagcctcaggagcaaggac 1309
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>gb|AC004228.2|AC004228 Homo sapiens Chromosome 11q12.2 PAC clone pDJ519o13 containing human
            gene for ferritin heavy chain (FTH), complete sequence
          Length = 196080

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 383  cccagcctcaggagcaaggac 403
            |||||||||||||||||||||
Sbjct: 9329 cccagcctcaggagcaaggac 9349
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>dbj|AP002380.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-467L20, complete
              sequence
          Length = 188788

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 383    cccagcctcaggagcaaggac 403
              |||||||||||||||||||||
Sbjct: 101131 cccagcctcaggagcaaggac 101151
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>gb|AC004770.1|AC004770 Homo sapiens chromosome 11, BAC CIT-HSP-311e8 (BC269730) containing the
              hFEN1 gene, complete sequence
          Length = 185035

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 383    cccagcctcaggagcaaggac 403
              |||||||||||||||||||||
Sbjct: 100192 cccagcctcaggagcaaggac 100172
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>gb|U73629.1|HSU73629 Human chromosome 11 114g8 cosmid, complete sequence
          Length = 39563

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 383   cccagcctcaggagcaaggac 403
             |||||||||||||||||||||
Sbjct: 19858 cccagcctcaggagcaaggac 19878
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>gb|AY644454.1| Fibropapilloma-associated turtle herpesvirus unique long region
             containing UL9-UL30 genes, genomic sequence
          Length = 43843

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 583   gctgtccatttccgagccgg 602
             ||||||||||||||||||||
Sbjct: 27833 gctgtccatttccgagccgg 27814
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>gb|AY646915.1| Fibropapilloma-associated turtle herpesvirus strain FL var C capsid
           protein (UL18) gene, partial cds
          Length = 1213

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 583 gctgtccatttccgagccgg 602
           ||||||||||||||||||||
Sbjct: 325 gctgtccatttccgagccgg 306
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>gb|AY646914.1| Fibropapilloma-associated turtle herpesvirus strain HA_variant
           capsid protein (UL18) gene, partial cds
          Length = 1213

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 583 gctgtccatttccgagccgg 602
           ||||||||||||||||||||
Sbjct: 325 gctgtccatttccgagccgg 306
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>gb|AY646913.1| Fibropapilloma-associated turtle herpesvirus strain FL_var_B capsid
           protein (UL18) gene, partial cds
          Length = 1213

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 583 gctgtccatttccgagccgg 602
           ||||||||||||||||||||
Sbjct: 325 gctgtccatttccgagccgg 306
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>gb|AY646912.1| Fibropapilloma-associated turtle herpesvirus strain FL_var_A capsid
           protein (UL18) gene, partial cds
          Length = 1213

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 583 gctgtccatttccgagccgg 602
           ||||||||||||||||||||
Sbjct: 325 gctgtccatttccgagccgg 306
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>gb|AY646910.1| Fibropapilloma-associated turtle herpesvirus strain FL_var_C capsid
           protein (UL18) gene, partial cds
          Length = 1213

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 583 gctgtccatttccgagccgg 602
           ||||||||||||||||||||
Sbjct: 325 gctgtccatttccgagccgg 306
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>gb|AY646909.1| Fibropapilloma-associated turtle herpesvirus strain FL_var_A capsid
           protein (UL18) gene, partial cds
          Length = 1213

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 583 gctgtccatttccgagccgg 602
           ||||||||||||||||||||
Sbjct: 325 gctgtccatttccgagccgg 306
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>ref|XM_369574.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
            (MG05890.4) partial mRNA
          Length = 3141

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 213  ggaggaggtcgcggcgcagg 232
            ||||||||||||||||||||
Sbjct: 1072 ggaggaggtcgcggcgcagg 1053
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 37      tccagcggcgcggcggccgg 56
               ||||||||||||||||||||
Sbjct: 3643262 tccagcggcgcggcggccgg 3643243
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>dbj|AK202064.1| Mus musculus cDNA, clone:Y1G0140E10, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000053811, based on BLAT search
          Length = 399

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 384 ccagcctcaggagcaaggacagcgacca 411
           |||||||||||||  |||||||||||||
Sbjct: 10  ccagcctcaggagttaggacagcgacca 37
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 35      agtccagcggcgcggcggcc 54
               ||||||||||||||||||||
Sbjct: 1889592 agtccagcggcgcggcggcc 1889611
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>gb|AY941797.1| Homo sapiens alpha 1,4-galactosyltransferase (A4GALT) gene, complete
            cds
          Length = 32595

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 42   cggcgcggcggccggagggc 61
            ||||||||||||||||||||
Sbjct: 1875 cggcgcggcggccggagggc 1856
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>dbj|AP004371.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-535N6, complete
              sequence
          Length = 180721

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 197    tggtggaagagcctagggaggagg 220
              ||||||||||||||||| ||||||
Sbjct: 153238 tggtggaagagcctaggaaggagg 153215


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,962,553
Number of Sequences: 3902068
Number of extensions: 3962553
Number of successful extensions: 105211
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104718
Number of HSP's gapped (non-prelim): 492
length of query: 616
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 593
effective length of database: 17,143,297,704
effective search space: 10165975538472
effective search space used: 10165975538472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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