ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal40l09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY758238.1| Hordeum vulgare cultivar Dairokkaku BM5a mRNA, complete cds Length = 1153 Score = 315 bits (159), Expect = 2e-83 Identities = 159/159 (100%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 81 Query: 61 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagg 141 Query: 121 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||||||||||| Sbjct: 142 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 180
>gb|AY785824.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai MADS-box protein HvBM5A (BM5A) gene, promoter region and partial cds Length = 2187 Score = 307 bits (155), Expect = 5e-81 Identities = 158/159 (99%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1995 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 2054 Query: 61 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2055 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgg 2114 Query: 121 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2115 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 2153
>gb|AY785823.1| Hordeum vulgare subsp. vulgare cultivar Strider MADS-box protein HvBM5A (BM5A) gene, promoter region and partial cds Length = 2207 Score = 307 bits (155), Expect = 5e-81 Identities = 158/159 (99%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2015 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 2074 Query: 61 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2075 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgg 2134 Query: 121 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2135 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 2173
>gb|AY785822.1| Hordeum vulgare subsp. vulgare cultivar Igri MADS-box protein HvBM5A (BM5A) gene, promoter region and partial cds Length = 2197 Score = 307 bits (155), Expect = 5e-81 Identities = 158/159 (99%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2005 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 2064 Query: 61 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2065 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgg 2124 Query: 121 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2125 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 2163
>gb|AY785821.1| Hordeum vulgare subsp. vulgare cultivar Nure MADS-box protein HvBM5A (BM5A) gene, promoter region and partial cds Length = 2197 Score = 307 bits (155), Expect = 5e-81 Identities = 158/159 (99%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2005 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 2064 Query: 61 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2065 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgg 2124 Query: 121 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2125 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 2163
>gb|AY785819.1| Hordeum vulgare subsp. vulgare cultivar Tremois MADS-box protein HvBM5A (BM5A) gene, promoter region and partial cds Length = 2189 Score = 307 bits (155), Expect = 5e-81 Identities = 158/159 (99%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1997 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 2056 Query: 61 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2057 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgg 2116 Query: 121 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2117 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 2155
>gb|AY785818.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 MADS-box protein HvBM5A (BM5A) gene, promoter region and partial cds Length = 2207 Score = 307 bits (155), Expect = 5e-81 Identities = 158/159 (99%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2015 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 2074 Query: 61 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2075 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgg 2134 Query: 121 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2135 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 2173
>gb|AY785817.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo MADS-box protein HvBM5A (BM5A) gene, promoter region and partial cds Length = 2207 Score = 307 bits (155), Expect = 5e-81 Identities = 158/159 (99%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2015 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 2074 Query: 61 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2075 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgg 2134 Query: 121 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2135 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 2173
>gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri BM5a mRNA, complete cds Length = 1153 Score = 307 bits (155), Expect = 5e-81 Identities = 158/159 (99%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 81 Query: 61 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 82 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgg 141 Query: 121 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||||||||||| Sbjct: 142 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 180
>gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, complete cds; and transposon MITE-like and retrotransposon Lolaog, complete sequence Length = 17220 Score = 307 bits (155), Expect = 5e-81 Identities = 158/159 (99%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2030 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 2089 Query: 61 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagg 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2090 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgg 2149 Query: 121 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2150 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 2188
>gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 283 bits (143), Expect = 8e-74 Identities = 146/147 (99%) Strand = Plus / Plus Query: 13 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 60 Query: 73 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagggaaggtgcagct 132 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgggaaggtgcagct 120 Query: 133 gaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||| Sbjct: 121 gaagcggatcgagaacaagatcaaccg 147
>gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 283 bits (143), Expect = 8e-74 Identities = 146/147 (99%) Strand = Plus / Plus Query: 13 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 60 Query: 73 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagggaaggtgcagct 132 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgggaaggtgcagct 120 Query: 133 gaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||| Sbjct: 121 gaagcggatcgagaacaagatcaaccg 147
>gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 283 bits (143), Expect = 8e-74 Identities = 146/147 (99%) Strand = Plus / Plus Query: 13 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 60 Query: 73 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagggaaggtgcagct 132 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgggaaggtgcagct 120 Query: 133 gaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||| Sbjct: 121 gaagcggatcgagaacaagatcaaccg 147
>gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Tremois MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 283 bits (143), Expect = 8e-74 Identities = 146/147 (99%) Strand = Plus / Plus Query: 13 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 60 Query: 73 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagggaaggtgcagct 132 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgggaaggtgcagct 120 Query: 133 gaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||| Sbjct: 121 gaagcggatcgagaacaagatcaaccg 147
>gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Strider MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 283 bits (143), Expect = 8e-74 Identities = 146/147 (99%) Strand = Plus / Plus Query: 13 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 60 Query: 73 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagggaaggtgcagct 132 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgggaaggtgcagct 120 Query: 133 gaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||| Sbjct: 121 gaagcggatcgagaacaagatcaaccg 147
>gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 283 bits (143), Expect = 8e-74 Identities = 146/147 (99%) Strand = Plus / Plus Query: 13 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 60 Query: 73 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagggaaggtgcagct 132 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgggaaggtgcagct 120 Query: 133 gaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||| Sbjct: 121 gaagcggatcgagaacaagatcaaccg 147
>gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1113 Score = 283 bits (143), Expect = 8e-74 Identities = 146/147 (99%) Strand = Plus / Plus Query: 13 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 60 Query: 73 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagggaaggtgcagct 132 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 61 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgggaaggtgcagct 120 Query: 133 gaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||| Sbjct: 121 gaagcggatcgagaacaagatcaaccg 147
>gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1151 Score = 274 bits (138), Expect = 7e-71 Identities = 157/163 (96%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 22 ctgacagccatggctccgccacctcgcctccgcccgcgcctctgggagtagccgtcgcgg 81 Query: 61 tcgctcgctcg----ctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 116 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82 tcgctcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 141 Query: 117 gagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 gcgggaaggtgcagctgaagcggatcgagaacaagatcaaccg 184
>gb|AY785820.1| Hordeum vulgare subsp. spontaneum cultivar OSU11 Caesarea 26-24 MADS-box protein HvBM5A (BM5A) gene, promoter region and partial cds Length = 2210 Score = 274 bits (138), Expect = 7e-71 Identities = 157/163 (96%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2014 ctgacagccatggctccgccacctcgcctccgcccgcgcctctgggagtagccgtcgcgg 2073 Query: 61 tcgctcgctcg----ctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 116 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2074 tcgctcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 2133 Query: 117 gagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2134 gcgggaaggtgcagctgaagcggatcgagaacaagatcaaccg 2176
>gb|AY785816.1| Hordeum vulgare subsp. vulgare cultivar Harrington MADS-box protein HvBM5A (BM5A) gene, promoter region and partial cds Length = 2210 Score = 274 bits (138), Expect = 7e-71 Identities = 157/163 (96%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2014 ctgacagccatggctccgccacctcgcctccgcccgcgcctctgggagtagccgtcgcgg 2073 Query: 61 tcgctcgctcg----ctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 116 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2074 tcgctcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 2133 Query: 117 gagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2134 gcgggaaggtgcagctgaagcggatcgagaacaagatcaaccg 2176
>gb|AY785815.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) gene, promoter region and partial cds Length = 2208 Score = 274 bits (138), Expect = 7e-71 Identities = 157/163 (96%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2012 ctgacagccatggctccgccacctcgcctccgcccgcgcctctgggagtagccgtcgcgg 2071 Query: 61 tcgctcgct----cgctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 116 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2072 tcgctcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 2131 Query: 117 gagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2132 gcgggaaggtgcagctgaagcggatcgagaacaagatcaaccg 2174
>gb|AY758237.1| Hordeum vulgare cultivar Golden Promise BM5a mRNA, complete cds Length = 1157 Score = 274 bits (138), Expect = 7e-71 Identities = 157/163 (96%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 22 ctgacagccatggctccgccacctcgcctccgcccgcgcctctgggagtagccgtcgcgg 81 Query: 61 tcgctcgctcg----ctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 116 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82 tcgctcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 141 Query: 117 gagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 gcgggaaggtgcagctgaagcggatcgagaacaagatcaaccg 184
>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds Length = 12080 Score = 274 bits (138), Expect = 7e-71 Identities = 157/163 (96%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1258 ctgacagccatggctccgccacctcgcctccgcccgcgcctctgggagtagccgtcgcgg 1317 Query: 61 tcgctcgctcg----ctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 116 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1318 tcgctcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 1377 Query: 117 gagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1378 gcgggaaggtgcagctgaagcggatcgagaacaagatcaaccg 1420
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 274 bits (138), Expect = 7e-71 Identities = 157/163 (96%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 52978 ctgacagccatggctccgccacctcgcctccgcccgcgcctctgggagtagccgtcgcgg 53037 Query: 61 tcgctcgctcg----ctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 116 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53038 tcgctcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 53097 Query: 117 gagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 53098 gcgggaaggtgcagctgaagcggatcgagaacaagatcaaccg 53140
>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete cds Length = 12360 Score = 274 bits (138), Expect = 7e-71 Identities = 157/163 (96%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2027 ctgacagccatggctccgccacctcgcctccgcccgcgcctctgggagtagccgtcgcgg 2086 Query: 61 tcgctcgctc----gctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 116 |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2087 tcgctcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 2146 Query: 117 gagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2147 gcgggaaggtgcagctgaagcggatcgagaacaagatcaaccg 2189
>emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box protein 5 (m5 gene) Length = 1196 Score = 258 bits (130), Expect = 4e-66 Identities = 155/163 (95%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 28 ctgacagccatggctccgccacctcgcctccgcccgcgcctctgagagtagccgtcgcgg 87 Query: 61 tcgctcgct----cgctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 116 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88 tcgctcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggc 147 Query: 117 gagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 148 gcaggaaggtgcagctgaagcggatcgagaacaagatcaaccg 190
>gb|AY785832.1| Hordeum vulgare subsp. spontaneum cultivar OSU11 Caesarea 26-24 MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 250 bits (126), Expect = 1e-63 Identities = 145/151 (96%), Gaps = 4/151 (2%) Strand = Plus / Plus Query: 13 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgc---- 68 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctccgccacctcgcctccgcccgcgcctctgggagtagccgtcgcggtcgctcgctcgc 60 Query: 69 tcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagggaaggtgc 128 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 61 tcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgggaaggtgc 120 Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||| Sbjct: 121 agctgaagcggatcgagaacaagatcaaccg 151
>gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harrington MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 250 bits (126), Expect = 1e-63 Identities = 145/151 (96%), Gaps = 4/151 (2%) Strand = Plus / Plus Query: 13 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgc---- 68 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctccgccacctcgcctccgcccgcgcctctgggagtagccgtcgcggtcgctcgctcgc 60 Query: 69 tcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagggaaggtgc 128 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 61 tcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgggaaggtgc 120 Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||| Sbjct: 121 agctgaagcggatcgagaacaagatcaaccg 151
>gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 250 bits (126), Expect = 1e-63 Identities = 145/151 (96%), Gaps = 4/151 (2%) Strand = Plus / Plus Query: 13 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgc---- 68 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctccgccacctcgcctccgcccgcgcctctgggagtagccgtcgcggtcgctcgctcgc 60 Query: 69 tcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagggaaggtgc 128 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 61 tcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgggaaggtgc 120 Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||| Sbjct: 121 agctgaagcggatcgagaacaagatcaaccg 151
>gb|AY866485.1| Hordeum vulgare subsp. vulgare cultivar Triumph MADS-box protein HvBM5A gene, promoter region and partial cds Length = 2195 Score = 250 bits (126), Expect = 1e-63 Identities = 150/159 (94%), Gaps = 8/159 (5%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2011 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 2070 Query: 61 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagg 120 |||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2071 tcgc--------tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgg 2122 Query: 121 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||||||||||| Sbjct: 2123 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 2161
>gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triumph BM5a mRNA, complete cds Length = 1145 Score = 250 bits (126), Expect = 1e-63 Identities = 150/159 (94%), Gaps = 8/159 (5%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 81 Query: 61 tcgctcgctcgctcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagg 120 |||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 82 tcgc--------tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgg 133 Query: 121 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||||||||||| Sbjct: 134 gaaggtgcagctgaagcggatcgagaacaagatcaaccg 172
>gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triumph MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1105 Score = 226 bits (114), Expect = 2e-56 Identities = 138/147 (93%), Gaps = 8/147 (5%) Strand = Plus / Plus Query: 13 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgctcgctcgc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcggtcgc-------- 52 Query: 73 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgagggaaggtgcagct 132 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 53 tcgctgctgccggtgttggcccggtcctcgagcggagatggggcgcgggaaggtgcagct 112 Query: 133 gaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||| Sbjct: 113 gaagcggatcgagaacaagatcaaccg 139
>gb|AY616459.1| Triticum aestivum cultivar Triple Dirk TDD line VRN-A1a gene, promoter and partial cds Length = 853 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 582 gttggcccggttctcgagcggagatggggcgggggaaggtgcagctgaagcggatcgaga 641 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 642 acaagatcaaccg 654 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 492 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 551 Query: 61 tc 62 || Sbjct: 552 tc 553
>gb|AY616458.1| Triticum aestivum cultivar Triple Dirk TDD line VRN-A1a gene, promoter and partial cds Length = 944 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 673 gttggcccggttctcgagcggagatggggcgggggaaggtgcagctgaagcggatcgaga 732 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 733 acaagatcaaccg 745 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 583 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 642 Query: 61 tc 62 || Sbjct: 643 tc 644
>gb|AY616454.1| Aegilops tauschii BAC 22J2 VRN-D1 gene, promoter and partial cds Length = 1227 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 957 gttggcccggttctcgagcggagatggggcgcgggaaggtgcagctgaagcggatcgaga 1016 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 1017 acaagatcaaccg 1029 Score = 99.6 bits (50), Expect = 2e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| Sbjct: 867 ctgacagccatggctccgccccctcgcctccgcctgcgcctgtcggagtagccgtcgcgg 926 Query: 61 tc 62 || Sbjct: 927 tc 928
>gb|AY616452.1| Triticum aestivum cultivar Langdon BAC 1256C17 VRN-A1 gene, promoter and partial cds Length = 1248 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 977 gttggcccggttctcgagcggagatggggcgggggaaggtgcagctgaagcggatcgaga 1036 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 1037 acaagatcaaccg 1049 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 887 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 946 Query: 61 tc 62 || Sbjct: 947 tc 948
>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds Length = 16224 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2325 gttggcccggttctcgagcggagatggggcgcgggaaggtgcagctgaagcggatcgaga 2384 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 2385 acaagatcaaccg 2397 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 2235 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 2294 Query: 61 tc 62 || Sbjct: 2295 tc 2296
>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds Length = 15688 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2292 gttggcccggttctcgagcggagatggggcgcgggaaggtgcagctgaagcggatcgaga 2351 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 2352 acaagatcaaccg 2364 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 2202 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 2261 Query: 61 tc 62 || Sbjct: 2262 tc 2263
>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds Length = 16209 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2317 gttggcccggttctcgagcggagatggggcgcgggaaggtgcagctgaagcggatcgaga 2376 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 2377 acaagatcaaccg 2389 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 2227 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 2286 Query: 61 tc 62 || Sbjct: 2287 tc 2288
>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence Length = 133625 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 69364 gttggcccggttctcgagcggagatggggcgcgggaaggtgcagctgaagcggatcgaga 69423 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 69424 acaagatcaaccg 69436 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 69274 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 69333 Query: 61 tc 62 || Sbjct: 69334 tc 69335
>gb|AY747606.1| Triticum aestivum cultivar Triple Dirk C line VRN-D1 (VRN-D1) gene, complete cds Length = 12335 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 467 gttggcccggttctcgagcggagatggggcgcgggaaggtgcagctgaagcggatcgaga 526 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 527 acaagatcaaccg 539 Score = 99.6 bits (50), Expect = 2e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| Sbjct: 377 ctgacagccatggctccgccccctcgcctccgcctgcgcctgtcggagtagccgtcgcgg 436 Query: 61 tc 62 || Sbjct: 437 tc 438
>gb|AY747605.1| Aegilops tauschii BAC 22J2 VRN-D1 (VRN-D1) gene, complete cds Length = 12224 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 467 gttggcccggttctcgagcggagatggggcgcgggaaggtgcagctgaagcggatcgaga 526 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 527 acaagatcaaccg 539 Score = 99.6 bits (50), Expect = 2e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| Sbjct: 377 ctgacagccatggctccgccccctcgcctccgcctgcgcctgtcggagtagccgtcgcgg 436 Query: 61 tc 62 || Sbjct: 437 tc 438
>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12464 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 716 gttggcccggttctcgagcggagatggggcgggggaaggtgcagctgaagcggatcgaga 775 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 776 acaagatcaaccg 788 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 626 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 685 Query: 61 tc 62 || Sbjct: 686 tc 687
>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence Length = 12233 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 485 gttggcccggttctcgagcggagatggggcgggggaaggtgcagctgaagcggatcgaga 544 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 545 acaagatcaaccg 557 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 395 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 454 Query: 61 tc 62 || Sbjct: 455 tc 456
>gb|AY747599.1| Triticum aestivum cultivar IL369 line VRN-A1 (VRN-A1) gene, complete cds; and gypsy retrotransposon Sukkula, complete sequence Length = 6730 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 484 gttggcccggttctcgagcggagatggggcgggggaaggtgcagctgaagcggatcgaga 543 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 544 acaagatcaaccg 556 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 394 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 453 Query: 61 tc 62 || Sbjct: 454 tc 455
>gb|AY747598.1| Triticum turgidum cultivar Langdon clone BAC 1256C17 VRN-A1 (VRN-A1) gene, complete cds Length = 5065 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 485 gttggcccggttctcgagcggagatggggcgggggaaggtgcagctgaagcggatcgaga 544 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 545 acaagatcaaccg 557 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 395 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 454 Query: 61 tc 62 || Sbjct: 455 tc 456
>gb|AY747597.1| Triticum aestivum cultivar Triple Dirk E line VRN-D1 (VRN-D1) gene, complete cds Length = 8100 Score = 129 bits (65), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 467 gttggcccggttctcgagcggagatggggcgcgggaaggtgcagctgaagcggatcgaga 526 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 527 acaagatcaaccg 539 Score = 99.6 bits (50), Expect = 2e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| Sbjct: 377 ctgacagccatggctccgccccctcgcctccgcctgcgcctgtcggagtagccgtcgcgg 436 Query: 61 tc 62 || Sbjct: 437 tc 438
>gb|AY616453.1| Triticum aestivum cultivar Langdon BAC 1225D16 VRN-B1 gene, promoter and partial cds Length = 1267 Score = 113 bits (57), Expect = 2e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 |||||||| || ||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 997 gttggccccgttctccagcggagatggggcgcgggaaggtgcagctgaagcggatcgaga 1056 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 1057 acaagatcaaccg 1069 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||| || |||| ||||| |||||| |||||||||||||||||| Sbjct: 907 ctgacagccatggctccgcccccccgcccccgcctgcgcctgtcggagtagccgtcgcgg 966 Query: 61 tc 62 || Sbjct: 967 tc 968
>gb|AY280870.1| Triticum aestivum MADS-box protein TaVRT-1 mRNA, complete cds Length = 1210 Score = 113 bits (57), Expect = 2e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 |||||||| || ||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 127 gttggccccgttctccagcggagatggggcgcgggaaggtgcagctgaagcggatcgaga 186 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 187 acaagatcaaccg 199 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||| || |||| ||||| |||||| |||||||||||||||||| Sbjct: 37 ctgacagccatggctccgcccccccgcccccgcctgcgcctgtcggagtagccgtcgcgg 96 Query: 61 tc 62 || Sbjct: 97 tc 98
>gb|AY747604.1| Triticum aestivum cultivar Triple Dirk C line VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 113 bits (57), Expect = 2e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 |||||||| || ||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 482 gttggccccgttctccagcggagatggggcgcgggaaggtgcagctgaagcggatcgaga 541 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 542 acaagatcaaccg 554 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||| || |||| ||||| |||||| |||||||||||||||||| Sbjct: 392 ctgacagccatggctccgcccccccgcccccgcctgcgcctgtcggagtagccgtcgcgg 451 Query: 61 tc 62 || Sbjct: 452 tc 453
>gb|AY747603.1| Triticum aestivum cultivar Triple Dirk B line VRN-B1 (VRN-B1) gene, complete cds Length = 6297 Score = 113 bits (57), Expect = 2e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 |||||||| || ||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 482 gttggccccgttctccagcggagatggggcgcgggaaggtgcagctgaagcggatcgaga 541 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 542 acaagatcaaccg 554 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||| || |||| ||||| |||||| |||||||||||||||||| Sbjct: 392 ctgacagccatggctccgcccccccgcccccgcctgcgcctgtcggagtagccgtcgcgg 451 Query: 61 tc 62 || Sbjct: 452 tc 453
>gb|AY747602.1| Triticum turgidum cultivar Langdon clone BAC 1225D16 VRN-B1 (VRN-B1) gene, complete cds Length = 13141 Score = 113 bits (57), Expect = 2e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgcagctgaagcggatcgaga 146 |||||||| || ||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 482 gttggccccgttctccagcggagatggggcgcgggaaggtgcagctgaagcggatcgaga 541 Query: 147 acaagatcaaccg 159 ||||||||||||| Sbjct: 542 acaagatcaaccg 554 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||| || |||| ||||| |||||| |||||||||||||||||| Sbjct: 392 ctgacagccatggctccgcccccccgcccccgcctgcgcctgtcggagtagccgtcgcgg 451 Query: 61 tc 62 || Sbjct: 452 tc 453
>dbj|AB007504.1| Triticum aestivum TaMADS#11 mRNA for MADS box transcription factor, complete cds Length = 1161 Score = 109 bits (55), Expect = 3e-21 Identities = 58/59 (98%) Strand = Plus / Plus Query: 101 cgagcggagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 66 cgagcggagatggggcgcgggaaggtgcagctgaagcggatcgagaacaagatcaaccg 124
>gb|AY616457.1| Triticum aestivum cultivar Triple Dirk TDC line VRN-D1 gene, promoter and partial cds Length = 606 Score = 99.6 bits (50), Expect = 2e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||| Sbjct: 474 ctgacagccatggctccgccccctcgcctccgcctgcgcctgtcggagtagccgtcgcgg 533 Query: 61 tc 62 || Sbjct: 534 tc 535 Score = 69.9 bits (35), Expect = 2e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgca 129 ||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 564 gttggcccggttctcgagcggagatggggcgcgggaaggtgca 606
>emb|AJ430641.1|ZMA430641 Zea mays mRNA for putative MADS-domain transcription factor (m4 gene) Length = 1280 Score = 95.6 bits (48), Expect = 4e-17 Identities = 54/56 (96%) Strand = Plus / Plus Query: 104 gcggagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 295 gcggcgatggggcgcgggaaggtgcagctgaagcggatcgagaacaagatcaaccg 350
>emb|AJ430632.1|ZMA430632 Zea mays mRNA for putative MADS-domain transcription factor (m15 gene) Length = 1216 Score = 95.6 bits (48), Expect = 4e-17 Identities = 54/56 (96%) Strand = Plus / Plus Query: 104 gcggagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 291 gcggcgatggggcgcgggaaggtgcagctgaagcggatcgagaacaagatcaaccg 346
>gb|AY395715.1| Dendrocalamus latiflorus MADS-box protein (Mads2) mRNA, complete cds Length = 735 Score = 91.7 bits (46), Expect = 6e-16 Identities = 49/50 (98%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggggcgcgggaaggtgcagctgaagcggatcgagaacaagatcaaccg 50
>gb|AY395714.1| Dendrocalamus latiflorus MADS-box protein (Mads1) mRNA, complete cds Length = 735 Score = 91.7 bits (46), Expect = 6e-16 Identities = 49/50 (98%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggggcgcgggaaggtgcagctgaagcggatcgagaacaagatcaaccg 50
>gb|DQ108934.1| Festuca pratensis MADS-box transcription factor (VRN1) gene, partial cds Length = 278 Score = 89.7 bits (45), Expect = 2e-15 Identities = 51/53 (96%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 115 gagatggggcgcgggaaggtgcagctcaagcggatcgagaacaagatcaaccg 167
>ref|XM_469789.1| Oryza sativa (japonica cultivar-group), mRNA Length = 813 Score = 87.7 bits (44), Expect = 9e-15 Identities = 50/52 (96%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 22 agatggggcggggcaaggtgcagctgaagcggatcgagaacaagatcaaccg 73
>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone OSJNBa0032E21, complete sequence Length = 137580 Score = 87.7 bits (44), Expect = 9e-15 Identities = 50/52 (96%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 54983 agatggggcggggcaaggtgcagctgaagcggatcgagaacaagatcaaccg 55034 Score = 58.0 bits (29), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 41509 gagatggggcgaggcaaggtggtgcttcagcggatcgagaacaagatca 41557
>gb|AY023456.1| Oryza sativa microsatellite MRG5781 containing (TCC)X10, genomic sequence Length = 230 Score = 87.7 bits (44), Expect = 9e-15 Identities = 50/52 (96%) Strand = Plus / Minus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 88 agatggggcggggcaaggtgcagctgaagcggatcgagaacaagatcaaccg 37
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 87.7 bits (44), Expect = 9e-15 Identities = 50/52 (96%) Strand = Plus / Minus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 30748800 agatggggcggggcaaggtgcagctgaagcggatcgagaacaagatcaaccg 30748749 Score = 71.9 bits (36), Expect = 5e-10 Identities = 45/48 (93%) Strand = Plus / Minus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||| | ||||||||| ||||||||||||||||||||||||||| Sbjct: 6029557 agatggggagggggaaggtggagctgaagcggatcgagaacaagatca 6029510 Score = 58.0 bits (29), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 30762274 gagatggggcgaggcaaggtggtgcttcagcggatcgagaacaagatca 30762226 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 cggtcgctcgctcgctcgc 76 ||||||||||||||||||| Sbjct: 24614991 cggtcgctcgctcgctcgc 24614973
>gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS211 mRNA, complete cds Length = 1109 Score = 87.7 bits (44), Expect = 9e-15 Identities = 50/52 (96%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 100 agatggggcggggcaaggtgcagctgaagcggatcgagaacaagatcaaccg 151
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 87.7 bits (44), Expect = 9e-15 Identities = 50/52 (96%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 13591 agatggggcggggcaaggtgcagctgaagcggatcgagaacaagatcaaccg 13642 Score = 58.0 bits (29), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 117 gagatggggcgaggcaaggtggtgcttcagcggatcgagaacaagatca 165
>gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL10) mRNA, complete cds Length = 964 Score = 87.7 bits (44), Expect = 9e-15 Identities = 50/52 (96%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 87 agatggggcggggcaaggtgcagctgaagcggatcgagaacaagatcaaccg 138
>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete sequence Length = 128294 Score = 87.7 bits (44), Expect = 9e-15 Identities = 50/52 (96%) Strand = Plus / Minus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 57501 agatggggcggggcaaggtgcagctgaagcggatcgagaacaagatcaaccg 57450 Score = 58.0 bits (29), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 70975 gagatggggcgaggcaaggtggtgcttcagcggatcgagaacaagatca 70927
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 87.7 bits (44), Expect = 9e-15 Identities = 50/52 (96%) Strand = Plus / Minus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 30840223 agatggggcggggcaaggtgcagctgaagcggatcgagaacaagatcaaccg 30840172 Score = 71.9 bits (36), Expect = 5e-10 Identities = 45/48 (93%) Strand = Plus / Minus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||| | ||||||||| ||||||||||||||||||||||||||| Sbjct: 6028770 agatggggagggggaaggtggagctgaagcggatcgagaacaagatca 6028723 Score = 58.0 bits (29), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Minus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 30853697 gagatggggcgaggcaaggtggtgcttcagcggatcgagaacaagatca 30853649 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 58 cggtcgctcgctcgctcgc 76 ||||||||||||||||||| Sbjct: 24532460 cggtcgctcgctcgctcgc 24532442
>dbj|AK121171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081C04, full insert sequence Length = 1784 Score = 87.7 bits (44), Expect = 9e-15 Identities = 50/52 (96%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 303 agatggggcggggcaaggtgcagctgaagcggatcgagaacaagatcaaccg 354
>gb|AF058697.1|AF058697 Oryza sativa MADS14 protein mRNA, complete cds Length = 1373 Score = 87.7 bits (44), Expect = 9e-15 Identities = 50/52 (96%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 286 agatggggcggggcaaggtgcagctgaagcggatcgagaacaagatcaaccg 337
>dbj|AK069331.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019N01, full insert sequence Length = 1284 Score = 87.7 bits (44), Expect = 9e-15 Identities = 50/52 (96%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 306 agatggggcggggcaaggtgcagctgaagcggatcgagaacaagatcaaccg 357
>dbj|AB041020.1| Oryza sativa RAP1B mRNA for AP1-like MADS box protein, complete cds Length = 1124 Score = 87.7 bits (44), Expect = 9e-15 Identities = 50/52 (96%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 4 agatggggcggggcaaggtgcagctgaagcggatcgagaacaagatcaaccg 55
>gb|AY616463.1| Triticum turgidum subsp. dicoccum ST27 VRN-A1e gene, promoter and partial cds Length = 430 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 298 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 357 Query: 61 tc 62 || Sbjct: 358 tc 359 Score = 69.9 bits (35), Expect = 2e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgca 129 ||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 388 gttggcccggttctcgagcggagatggggcgggggaaggtgca 430
>gb|AY616462.1| Triticum turgidum subsp. dicoccoides VRN-A1d gene, promoter and partial cds Length = 452 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 320 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 379 Query: 61 tc 62 || Sbjct: 380 tc 381 Score = 69.9 bits (35), Expect = 2e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgca 129 ||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 410 gttggcccggttctcgagcggagatggggcgggggaaggtgca 452
>gb|AY616461.1| Triticum aestivum cultivar Spring Marquis VRN-A1b gene, promoter and partial cds Length = 462 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 330 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 389 Query: 61 tc 62 || Sbjct: 390 tc 391 Score = 69.9 bits (35), Expect = 2e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgca 129 ||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 420 gttggcccggttctcgagcggagatggggcgggggaaggtgca 462
>gb|AY616460.1| Triticum aestivum cultivar Spring Anza VRN-A1a gene, promoter and partial cds Length = 536 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 404 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 463 Query: 61 tc 62 || Sbjct: 464 tc 465 Score = 69.9 bits (35), Expect = 2e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgca 129 ||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 494 gttggcccggttctcgagcggagatggggcgggggaaggtgca 536
>gb|AY616456.1| Triticum aestivum cultivar Triple Dirk TDC line VRN-B1 gene, promoter and partial cds Length = 620 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||||||||||||||||||| || |||| ||||| |||||| |||||||||||||||||| Sbjct: 488 ctgacagccatggctccgcccccccgcccccgcctgcgcctgtcggagtagccgtcgcgg 547 Query: 61 tc 62 || Sbjct: 548 tc 549 Score = 54.0 bits (27), Expect = 1e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgca 129 |||||||| || ||| ||||||||||||||| ||||||||||| Sbjct: 578 gttggccccgttctccagcggagatggggcgcgggaaggtgca 620
>gb|AY616455.1| Triticum aestivum cultivar Triple Dirk TDC line VRN-A1 gene, promoter and partial cds Length = 484 Score = 83.8 bits (42), Expect = 1e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 1 ctgacagccatggctccgccacctcgcctccgcccgcgcctctcggagtagccgtcgcgg 60 |||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||| Sbjct: 352 ctgatagccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtcgcgg 411 Query: 61 tc 62 || Sbjct: 412 tc 413 Score = 69.9 bits (35), Expect = 2e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 87 gttggcccggtcctcgagcggagatggggcgagggaaggtgca 129 ||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 442 gttggcccggttctcgagcggagatggggcgggggaaggtgca 484
>gb|AY551920.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS215 mRNA, complete cds Length = 1136 Score = 81.8 bits (41), Expect = 6e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 167 gatggggcgggggaaggtgcagctgaagcggatagagaacaagatcaac 215
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 81.8 bits (41), Expect = 6e-13 Identities = 47/49 (95%) Strand = Plus / Minus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 476475 gatggggcgggggaaggtgcagctgaagcggatagagaacaagatcaac 476427 Score = 61.9 bits (31), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 119 gggaaggtgcagctgaagcggatcgagaacaagatcaac 157 |||| |||| ||||||||||||||||||||||||||||| Sbjct: 21379664 gggagggtggagctgaagcggatcgagaacaagatcaac 21379626 Score = 50.1 bits (25), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||| ||||| |||||||||| |||||||||||||||||| Sbjct: 24734984 gatggggagagggccggtgcagctgcggcggatcgagaacaagat 24735028 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 tcgctcgctcgctcgctgc 79 ||||||||||||||||||| Sbjct: 21538939 tcgctcgctcgctcgctgc 21538957
>gb|AY198326.1| Lolium perenne MADS1 mRNA, complete cds Length = 1284 Score = 81.8 bits (41), Expect = 6e-13 Identities = 50/53 (94%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||| || ||||||||||| |||||||||||||||||||||||||| Sbjct: 161 gagatggggcgcggcaaggtgcagctcaagcggatcgagaacaagatcaaccg 213
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 81.8 bits (41), Expect = 6e-13 Identities = 47/49 (95%) Strand = Plus / Minus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 78639 gatggggcgggggaaggtgcagctgaagcggatagagaacaagatcaac 78591
>gb|AF058698.1|AF058698 Oryza sativa MADS15 protein mRNA, complete cds Length = 1285 Score = 81.8 bits (41), Expect = 6e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 118 gatggggcgggggaaggtgcagctgaagcggatagagaacaagatcaac 166
>dbj|AK072683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023140K24, full insert sequence Length = 2563 Score = 81.8 bits (41), Expect = 6e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 182 gatggggcgggggaaggtgcagctgaagcggatagagaacaagatcaac 230
>dbj|AP003759.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1567_G09 Length = 121388 Score = 81.8 bits (41), Expect = 6e-13 Identities = 47/49 (95%) Strand = Plus / Minus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 30387 gatggggcgggggaaggtgcagctgaagcggatagagaacaagatcaac 30339
>gb|AF035378.1|AF035378 Lolium temulentum MADS-box protein 1 (MADS1) mRNA, complete cds Length = 1207 Score = 81.8 bits (41), Expect = 6e-13 Identities = 50/53 (94%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||| || ||||||||||| |||||||||||||||||||||||||| Sbjct: 137 gagatggggcgcggcaaggtgcagctcaagcggatcgagaacaagatcaaccg 189
>dbj|AB003325.1| Oryza sativa (japonica cultivar-group) mRNA for MADS box-like protein, complete cds, clone:E31864 Length = 1289 Score = 81.8 bits (41), Expect = 6e-13 Identities = 47/49 (95%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 124 gatggggcgggggaaggtgcagctgaagcggatagagaacaagatcaac 172
>ref|XM_476392.1| Oryza sativa (japonica cultivar-group), mRNA Length = 807 Score = 79.8 bits (40), Expect = 2e-12 Identities = 46/48 (95%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 |||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 atggggcgggggaaggtgcagctgaagcggatagagaacaagatcaac 48
>gb|AF139664.2|AF139664 Oryza sativa FDRMADS6 mRNA, complete cds Length = 1101 Score = 79.8 bits (40), Expect = 2e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||||||||||| ||||||||| Sbjct: 14 agatggggcggggcaaggtgcagctgaagcggatcgagaacacgatcaaccg 65
>gb|AY599759.1| Dendrocalamus latiflorus MADS6 protein (MADS6) mRNA, complete cds Length = 741 Score = 73.8 bits (37), Expect = 1e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 119 gggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10 gggaaggtggagctgaagcggatcgagaacaagatcaaccg 50
>gb|AY599757.1| Dendrocalamus latiflorus MADS4 protein (MADS4) mRNA, complete cds Length = 741 Score = 73.8 bits (37), Expect = 1e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 119 gggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10 gggaaggtggagctgaagcggatcgagaacaagatcaaccg 50
>gb|AY599756.1| Dendrocalamus latiflorus MADS3 protein (MADS3) mRNA, complete cds Length = 741 Score = 73.8 bits (37), Expect = 1e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 119 gggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 10 gggaaggtggagctgaagcggatcgagaacaagatcaaccg 50
>gb|AF204063.1| Oryza sativa MADS box protein MADS1 gene, promoter and complete cds Length = 11851 Score = 71.9 bits (36), Expect = 5e-10 Identities = 45/48 (93%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||| | ||||||||| ||||||||||||||||||||||||||| Sbjct: 1980 agatggggagggggaaggtggagctgaagcggatcgagaacaagatca 2027
>gb|AY895163.1| Oryza sativa (indica cultivar-group) MADS box protein (MADS1) gene, promoter region and partial cds Length = 4288 Score = 71.9 bits (36), Expect = 5e-10 Identities = 45/48 (93%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||| | ||||||||| ||||||||||||||||||||||||||| Sbjct: 3876 agatggggagggggaaggtggagctgaagcggatcgagaacaagatca 3923
>gb|DQ104328.1| Phalaenopsis amabilis AP1-related protein (ORAP11) mRNA, complete cds Length = 1090 Score = 71.9 bits (36), Expect = 5e-10 Identities = 42/44 (95%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 1 atgggtcgggggaaggtgcagctgaagcggatcgagaacaagat 44
>gb|AF112150.1|AF112150 Zea mays MADS box protein 3 (mads3) mRNA, complete cds Length = 1250 Score = 71.9 bits (36), Expect = 5e-10 Identities = 48/52 (92%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||| || |||||||||||||||||||| ||||||||||| ||||| Sbjct: 68 agatggggcgcggcaaggtgcagctgaagcggatagagaacaagataaaccg 119
>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08, complete sequence Length = 111961 Score = 71.9 bits (36), Expect = 5e-10 Identities = 45/48 (93%) Strand = Plus / Minus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||| | ||||||||| ||||||||||||||||||||||||||| Sbjct: 88092 agatggggagggggaaggtggagctgaagcggatcgagaacaagatca 88045
>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090D11, complete sequence Length = 174865 Score = 71.9 bits (36), Expect = 5e-10 Identities = 45/48 (93%) Strand = Plus / Minus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||| | ||||||||| ||||||||||||||||||||||||||| Sbjct: 23033 agatggggagggggaaggtggagctgaagcggatcgagaacaagatca 22986
>dbj|AK070981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023073O08, full insert sequence Length = 1188 Score = 71.9 bits (36), Expect = 5e-10 Identities = 45/48 (93%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||| | ||||||||| ||||||||||||||||||||||||||| Sbjct: 87 agatggggagggggaaggtggagctgaagcggatcgagaacaagatca 134
>dbj|AK069728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029M13, full insert sequence Length = 1152 Score = 71.9 bits (36), Expect = 5e-10 Identities = 45/48 (93%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||| | ||||||||| ||||||||||||||||||||||||||| Sbjct: 91 agatggggagggggaaggtggagctgaagcggatcgagaacaagatca 138
>gb|L34271.1|RICMADS1TF Oryza sativa box protein (MADS1) mRNA, complete cds Length = 1144 Score = 71.9 bits (36), Expect = 5e-10 Identities = 45/48 (93%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||| | ||||||||| ||||||||||||||||||||||||||| Sbjct: 66 agatggggagggggaaggtggagctgaagcggatcgagaacaagatca 113
>gb|AF411840.1| Elaeis guineensis MADS box transcription factor (SQUA1) mRNA, complete cds Length = 1282 Score = 69.9 bits (35), Expect = 2e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||| |||||| ||||||||||| |||||||||||||||||| ||||| Sbjct: 146 gatggggagagggagggtgcagctgaggcggatcgagaacaagataaaccg 196
>gb|AY599758.1| Dendrocalamus latiflorus MADS5 protein (MADS5) mRNA, complete cds Length = 741 Score = 67.9 bits (34), Expect = 9e-09 Identities = 37/38 (97%) Strand = Plus / Plus Query: 122 aaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||| ||||||||||||||||||||||||||||||| Sbjct: 13 aaggtggagctgaagcggatcgagaacaagatcaaccg 50
>emb|AJ249147.1|HVU249147 Hordeum vulgare mRNA for MADS-box protein 9 (m9 gene) Length = 1140 Score = 67.9 bits (34), Expect = 9e-09 Identities = 46/50 (92%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||| | |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 158 atggggagggggagggtggagctgaagcggatcgagaacaagatcaaccg 207
>gb|AY541068.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE9-like protein mRNA, complete cds Length = 1099 Score = 67.9 bits (34), Expect = 9e-09 Identities = 46/50 (92%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||| | |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 62 atggggagggggagggtggagctgaagcggatcgagaacaagatcaaccg 111
>gb|AF543316.1| Triticum aestivum MADS box protein (MADS) mRNA, complete cds Length = 961 Score = 67.9 bits (34), Expect = 9e-09 Identities = 46/50 (92%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||| |||||| |||| |||| |||||||||||||||||||||||||| Sbjct: 1 atggggagagggagggtggagctcaagcggatcgagaacaagatcaaccg 50
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 65.9 bits (33), Expect = 3e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||| |||||| |||| |||||||| |||||||||||||||||||| Sbjct: 77728 gatggggagagggagggtggagctgaagaggatcgagaacaagatcaac 77776
>ref|NM_185637.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1022 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 137 gatggggcgagggaaagtagagctgaagcggatcgagaacaagat 181
>gb|AY599760.1| Dendrocalamus latiflorus MADS7 protein (MADS7) mRNA, complete cds Length = 741 Score = 65.9 bits (33), Expect = 3e-08 Identities = 36/37 (97%) Strand = Plus / Plus Query: 123 aggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||| ||||||||||||||||||||||||||||||| Sbjct: 14 aggtggagctgaagcggatcgagaacaagatcaaccg 50
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 65.9 bits (33), Expect = 3e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||| |||||| |||| |||||||| |||||||||||||||||||| Sbjct: 19358502 gatggggagagggagggtggagctgaagaggatcgagaacaagatcaac 19358550
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 3168188 gatggggcgagggaaagtagagctgaagcggatcgagaacaagat 3168144 Score = 42.1 bits (21), Expect = 0.49 Identities = 24/25 (96%) Strand = Plus / Plus Query: 51 gccgtcgcggtcgctcgctcgctcg 75 ||||||||| ||||||||||||||| Sbjct: 5215523 gccgtcgcgatcgctcgctcgctcg 5215547 Score = 38.2 bits (19), Expect = 7.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 53 cgtcgcggtcgctcgctcgctcg 75 ||||||||||||| ||||||||| Sbjct: 6715691 cgtcgcggtcgctggctcgctcg 6715713
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 122373 gatggggcgagggaaagtagagctgaagcggatcgagaacaagat 122329
>dbj|AK072867.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143P16, full insert sequence Length = 1203 Score = 65.9 bits (33), Expect = 3e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||| |||||| |||| |||||||| |||||||||||||||||||| Sbjct: 110 gatggggagagggagggtggagctgaagaggatcgagaacaagatcaac 158
>dbj|AK064184.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-B10, full insert sequence Length = 1022 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 137 gatggggcgagggaaagtagagctgaagcggatcgagaacaagat 181
>gb|U78892.1|OSU78892 Oryza sativa MADS box protein (OsMADS8) mRNA, complete cds Length = 1179 Score = 65.9 bits (33), Expect = 3e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||| |||||| |||| |||||||| |||||||||||||||||||| Sbjct: 108 gatggggagagggagggtggagctgaagaggatcgagaacaagatcaac 156
>gb|U78890.1|OSU78890 Oryza sativa MADS box protein (OsMADS5) mRNA, complete cds Length = 1027 Score = 65.9 bits (33), Expect = 3e-08 Identities = 42/45 (93%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 124 gatggggcgagggaaagtagagctgaagcggatcgagaacaagat 168
>gb|BT017740.1| Zea mays clone EL01N0449B10.c mRNA sequence Length = 962 Score = 63.9 bits (32), Expect = 1e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 ||||||| || || |||||| ||||||||||||||||||||||||||| Sbjct: 54 agatgggtcgcggcaaggtggagctgaagcggatcgagaacaagatca 101
>gb|AY599764.1| Dendrocalamus latiflorus MADS11 protein (MADS11) mRNA, complete cds Length = 741 Score = 63.9 bits (32), Expect = 1e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 |||||| | ||||||||| ||||||||||||||||||||||||| Sbjct: 1 atggggagggggaaggtggagctgaagcggatcgagaacaagat 44
>emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box protein 3 (m3 gene) Length = 1540 Score = 63.9 bits (32), Expect = 1e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 104 gcggagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||||||| ||| |||||||||| |||||||||||||||||| ||||| Sbjct: 308 gcggagatggggcgcgggccggtgcagctgcggcggatcgagaacaagataaaccg 363
>emb|AJ430695.1|ZMA430695 Zea mays mRNA for putative MADS-domain transcription factor (m28 gene) Length = 1224 Score = 63.9 bits (32), Expect = 1e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 104 gcggagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||||||| ||| |||||||||| ||||||||||||||||||||||| Sbjct: 83 gcggagatggggcgggggccggtgcagctgcgccggatcgagaacaagatcaaccg 138
>gb|AF345911.1|AF345911 Oryza sativa MADS-box protein FDRMADS3 mRNA, complete cds Length = 1347 Score = 63.9 bits (32), Expect = 1e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaac 148 ||||||||| ||||||||||||||||||||||| |||||| Sbjct: 124 gatggggcgggggaaggtgcagctgaagcggatagagaac 163
>gb|AY198328.1| Lolium perenne MADS3 mRNA, complete cds Length = 1255 Score = 63.9 bits (32), Expect = 1e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 104 gcggagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||||||| ||| |||||||||| |||||||||||||||||| ||||| Sbjct: 83 gcggagatggggcgcgggccggtgcagctgcggcggatcgagaacaagataaaccg 138
>gb|AY198327.1| Lolium perenne MADS2 mRNA, complete cds Length = 1083 Score = 63.9 bits (32), Expect = 1e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||| || || |||||||||||||||||||| ||||||||||| ||||| Sbjct: 81 agatgggtcgcggcaaggtgcagctgaagcggatagagaacaagataaaccg 132
>gb|AY104374.1| Zea mays PCO099099 mRNA sequence Length = 1210 Score = 63.9 bits (32), Expect = 1e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 ||||||| || || |||||| ||||||||||||||||||||||||||| Sbjct: 237 agatgggtcgcggcaaggtggagctgaagcggatcgagaacaagatca 284
>gb|AY104958.1| Zea mays PCO115876 mRNA sequence Length = 1282 Score = 63.9 bits (32), Expect = 1e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 104 gcggagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||||||||| ||| |||||||||| ||||||||||||||||||||||| Sbjct: 119 gcggagatggggcgggggccggtgcagctgcgccggatcgagaacaagatcaaccg 174
>gb|AF035379.1|AF035379 Lolium temulentum MADS-box protein 2 (MADS2) mRNA, alternatively spliced product, complete cds Length = 1062 Score = 63.9 bits (32), Expect = 1e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||| || || |||||||||||||||||||| ||||||||||| ||||| Sbjct: 80 agatgggtcgcggcaaggtgcagctgaagcggatagagaacaagataaaccg 131
>gb|DQ248945.1| Taihangia rupestris TrFUL MADS-box protein mRNA, complete cds Length = 1064 Score = 61.9 bits (31), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 117 gagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||| ||||| |||||||||||||||||||||||||||| Sbjct: 101 gaggcaaggttcagctgaagcggatcgagaacaagatca 139
>gb|AY198329.1| Lolium perenne MADS4 mRNA, complete cds Length = 1119 Score = 61.9 bits (31), Expect = 5e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||| Sbjct: 125 agctgaagcggatcgagaacaagatcaaccg 155
>gb|DQ333324.1| Elaeis guineensis FUL-like MADS-box transcription factor mRNA, complete cds Length = 1047 Score = 61.9 bits (31), Expect = 5e-07 Identities = 46/51 (90%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||| |||| | ||||||||||| |||||||||||||||||| ||||| Sbjct: 8 gatggggagaggtagggtgcagctgaggcggatcgagaacaagataaaccg 58
>dbj|AP005156.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1729_E01 Length = 155527 Score = 61.9 bits (31), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 119 gggaaggtgcagctgaagcggatcgagaacaagatcaac 157 |||| |||| ||||||||||||||||||||||||||||| Sbjct: 23720 gggagggtggagctgaagcggatcgagaacaagatcaac 23682
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1008_E09 Length = 101964 Score = 61.9 bits (31), Expect = 5e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 119 gggaaggtgcagctgaagcggatcgagaacaagatcaac 157 |||| |||| ||||||||||||||||||||||||||||| Sbjct: 99832 gggagggtggagctgaagcggatcgagaacaagatcaac 99794
>gb|AY109845.1| Zea mays CL2300_1 mRNA sequence Length = 1488 Score = 61.9 bits (31), Expect = 5e-07 Identities = 46/51 (90%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||| || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 148 gatggggcgcggcaaggtacagctgaagcggatagagaacaagataaaccg 198
>gb|AF411841.1| Elaeis guineensis MADS box transcription factor (SQUA2) mRNA, complete cds Length = 712 Score = 61.9 bits (31), Expect = 5e-07 Identities = 46/51 (90%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||| |||| | ||||||||||||| |||||||||||||||| ||||| Sbjct: 52 gatggggagaggtagggtgcagctgaagaggatcgagaacaagataaaccg 102
>gb|U49734.1|SBU49734 Sorghum bicolor MADS box transcription factor SbMADS1 mRNA, complete cds Length = 1055 Score = 61.9 bits (31), Expect = 5e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||| Sbjct: 65 agctgaagcggatcgagaacaagatcaaccg 95
>gb|L46400.1|MZEMADSD Zea mays MADS-box protein (ZAP1) mRNA, complete cds Length = 1345 Score = 61.9 bits (31), Expect = 5e-07 Identities = 46/51 (90%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||| || ||||| |||||||||||||| ||||||||||| ||||| Sbjct: 148 gatggggcgcggcaaggtacagctgaagcggatagagaacaagataaaccg 198
>gb|L46398.1|MZEMADSB Zea mays MADS-box protein (ZAG5) mRNA, complete cds Length = 1262 Score = 61.9 bits (31), Expect = 5e-07 Identities = 31/31 (100%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||||||||||| Sbjct: 221 agctgaagcggatcgagaacaagatcaaccg 251
>gb|AY599754.1| Dendrocalamus latiflorus MADS17 protein (MADS17) mRNA, complete cds Length = 750 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||| | |||||||| |||||||||| |||||||||||||||||||| Sbjct: 1 atggggagggggaaggtcgagctgaagcgcatcgagaacaagatcaaccg 50
>emb|Y15008.1|OSY15008 Oryza sativa mRNA for M79 protein Length = 1003 Score = 60.0 bits (30), Expect = 2e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 122 aaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||| |||||||| |||||||||||||||||||||| Sbjct: 15 aaggtggagctgaagaggatcgagaacaagatcaaccg 52
>emb|AJ430638.1|ZMA430638 Zea mays mRNA for putative MADS-domain transcription factor (m24 gene) Length = 1299 Score = 60.0 bits (30), Expect = 2e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 308 atggggcgcgggaaggtggtgctgcagcggatcgagaacaagatca 353
>gb|AY198330.1| Lolium perenne MADS5 mRNA, complete cds Length = 1071 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||| || | |||| |||| |||||||||||||||||||||||||| Sbjct: 87 atggggcggggcagggtggagctcaagcggatcgagaacaagatcaaccg 136
>gb|AY103835.1| Zea mays PCO154775 mRNA sequence Length = 1079 Score = 60.0 bits (30), Expect = 2e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 69 atggggcgcgggaaggtggtgctgcagcggatcgagaacaagatca 114
>gb|AF029975.1| Eucalyptus grandis MADS box protein (EGM1) mRNA, complete cds Length = 1032 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 |||||||| |||| | |||| |||||||| |||||||||||||||||||| Sbjct: 20 agatggggagaggaagggtggagctgaagaggatcgagaacaagatcaac 69
>dbj|AB013106.1| Ipomoea nil PnSAH2 gene for SQUA-AP1 homolog, partial cds Length = 1138 Score = 60.0 bits (30), Expect = 2e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||||| |||| |||||| |||||| |||| ||||||||||||||||| Sbjct: 1 atggggcgggggagggtgcaactgaagaggatagagaacaagatcaaccg 50
>ref|XM_469790.1| Oryza sativa (japonica cultivar-group), mRNA Length = 839 Score = 58.0 bits (29), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 117 gagatggggcgaggcaaggtggtgcttcagcggatcgagaacaagatca 165
>gb|AY599755.1| Dendrocalamus latiflorus MADS18 protein (MADS18) mRNA, complete cds Length = 750 Score = 58.0 bits (29), Expect = 8e-06 Identities = 38/41 (92%) Strand = Plus / Plus Query: 119 gggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||| ||| |||||||||| |||||||||||||||||||| Sbjct: 10 gggaacgtggagctgaagcgcatcgagaacaagatcaaccg 50
>emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box protein 8 (m8 gene) Length = 1203 Score = 58.0 bits (29), Expect = 8e-06 Identities = 41/45 (91%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 |||||| || || |||||||||||||||||||| ||||||||||| Sbjct: 42 gatgggtcgcggtaaggtgcagctgaagcggatagagaacaagat 86
>gb|AY551926.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS221 mRNA, complete cds Length = 1070 Score = 58.0 bits (29), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 149 gagatggggcgaggcaaggtggtgcttcagcggatcgagaacaagatca 197
>gb|AY551922.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS217 mRNA, complete cds Length = 1028 Score = 58.0 bits (29), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 117 gagatggggcgaggcaaggtggtgcttcagcggatcgagaacaagatca 165
>emb|AJ320188.1|MDO320188 Malus domestica mRNA for MADS box protein (MADS12A gene) Length = 1096 Score = 58.0 bits (29), Expect = 8e-06 Identities = 35/37 (94%) Strand = Plus / Plus Query: 117 gagggaaggtgcagctgaagcggatcgagaacaagat 153 |||| ||||||||| |||||||||||||||||||||| Sbjct: 215 gaggtaaggtgcagatgaagcggatcgagaacaagat 251
>emb|AJ320187.1|MDO320187 Malus domestica mRNA for MADS box protein (MADS12 gene) Length = 1176 Score = 58.0 bits (29), Expect = 8e-06 Identities = 35/37 (94%) Strand = Plus / Plus Query: 117 gagggaaggtgcagctgaagcggatcgagaacaagat 153 |||| ||||||||| |||||||||||||||||||||| Sbjct: 215 gaggtaaggtgcagatgaagcggatcgagaacaagat 251
>gb|DQ119842.1| Dendrobium crumenatum MADS box protein SEP1 (SEP1) mRNA, complete cds Length = 1045 Score = 58.0 bits (29), Expect = 8e-06 Identities = 47/53 (88%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||| |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 56 gagatggggagagggagagtggagctgaagcggattgagaacaagattaaccg 108
>dbj|AK100227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048E14, full insert sequence Length = 1284 Score = 58.0 bits (29), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 282 gagatggggcgaggcaaggtggtgcttcagcggatcgagaacaagatca 330
>dbj|AB003324.1| Oryza sativa (japonica cultivar-group) mRNA for MADS box-like protein, complete cds, clone:E31254 Length = 1175 Score = 58.0 bits (29), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 257 gagatggggcgaggcaaggtggtgcttcagcggatcgagaacaagatca 305
>gb|AF411845.1| Elaeis guineensis MADS box transcription factor (AGL2-3) mRNA, complete cds Length = 1012 Score = 58.0 bits (29), Expect = 8e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaa 156 |||||||| |||| | |||| |||||||| ||||||||||||||||||| Sbjct: 78 agatggggagaggaagggtggagctgaagaggatcgagaacaagatcaa 126
>gb|AF411842.1| Elaeis guineensis MADS box transcription factor (SQUA3) mRNA, complete cds Length = 1268 Score = 58.0 bits (29), Expect = 8e-06 Identities = 41/45 (91%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||| |||||| ||||||||||||| ||||||||||| |||| Sbjct: 145 gatggggagagggagggtgcagctgaagaggatcgagaacgagat 189
>ref|XM_483487.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1056 Score = 56.0 bits (28), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||| |||||||| |||||||||||||||||||||| Sbjct: 82 ggtggagctgaagaggatcgagaacaagatcaaccg 117
>gb|AY337928.1| Crocus sativus putative Apetala1-like MADS-box transcription factor (Kcap1a) mRNA, complete cds Length = 1281 Score = 56.0 bits (28), Expect = 3e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 128 cagctgaagcggatcgagaacaagatcaaccg 159 |||||||||||||||||||||| ||||||||| Sbjct: 187 cagctgaagcggatcgagaacacgatcaaccg 218
>gb|AY599765.1| Dendrocalamus latiflorus MADS12 protein (MADS12) mRNA, complete cds Length = 735 Score = 56.0 bits (28), Expect = 3e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 |||||| | ||||||||| | ||||||||||||||||||||||| Sbjct: 1 atggggagggggaaggtggacctgaagcggatcgagaacaagat 44
>gb|AY599761.1| Dendrocalamus latiflorus MADS8 protein (MADS8) mRNA, complete cds Length = 735 Score = 56.0 bits (28), Expect = 3e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 122 aaggtgcagctgaagcggatcgagaacaagat 153 |||||| ||||||||||||||||||||||||| Sbjct: 13 aaggtggagctgaagcggatcgagaacaagat 44
>gb|AY599751.1| Dendrocalamus latiflorus MADS14 protein (MADS14) mRNA, complete cds Length = 735 Score = 56.0 bits (28), Expect = 3e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 122 aaggtgcagctgaagcggatcgagaacaagat 153 |||||| ||||||||||||||||||||||||| Sbjct: 13 aaggtggagctgaagcggatcgagaacaagat 44
>gb|AY599750.1| Dendrocalamus latiflorus MADS13 protein (MADS13) mRNA, complete cds Length = 735 Score = 56.0 bits (28), Expect = 3e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 122 aaggtgcagctgaagcggatcgagaacaagat 153 |||||| ||||||||||||||||||||||||| Sbjct: 13 aaggtggagctgaagcggatcgagaacaagat 44
>gb|AY551921.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS216 mRNA, complete cds Length = 1265 Score = 56.0 bits (28), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||| |||||||| |||||||||||||||||||||| Sbjct: 248 ggtggagctgaagaggatcgagaacaagatcaaccg 283
>gb|AY332477.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL6) mRNA, complete cds Length = 1025 Score = 56.0 bits (28), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||| |||||||| |||||||||||||||||||||| Sbjct: 63 ggtggagctgaagaggatcgagaacaagatcaaccg 98
>gb|U78891.2|OSU78891 Oryza sativa MADS box protein (MADS7) mRNA, complete cds Length = 1078 Score = 56.0 bits (28), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||| |||||||| |||||||||||||||||||||| Sbjct: 113 ggtggagctgaagaggatcgagaacaagatcaaccg 148
>emb|AJ430694.1|ZMA430694 Zea mays mRNA for putative MADS-domain transcription factor (m27 gene) Length = 935 Score = 56.0 bits (28), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||| |||| |||||||||||||||||||||||||| Sbjct: 43 ggtggagctcaagcggatcgagaacaagatcaaccg 78
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 56.0 bits (28), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||| |||||||| |||||||||||||||||||||| Sbjct: 26500763 ggtggagctgaagaggatcgagaacaagatcaaccg 26500798 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 tcgctcgctcgctcgctgc 79 ||||||||||||||||||| Sbjct: 28263156 tcgctcgctcgctcgctgc 28263174
>dbj|AP005529.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702E04 Length = 190948 Score = 56.0 bits (28), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||| |||||||| |||||||||||||||||||||| Sbjct: 49630 ggtggagctgaagaggatcgagaacaagatcaaccg 49665
>dbj|AK100263.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063L04, full insert sequence Length = 1055 Score = 56.0 bits (28), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||| |||||||| |||||||||||||||||||||| Sbjct: 81 ggtggagctgaagaggatcgagaacaagatcaaccg 116
>gb|AY936234.1| Amborella trichopoda AGL6 (AGL6) mRNA, complete cds Length = 1039 Score = 56.0 bits (28), Expect = 3e-05 Identities = 43/48 (89%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 |||||| |||| | |||| |||||||||| |||||||||||||||||| Sbjct: 1 atggggagaggaagggtggagctgaagcgaatcgagaacaagatcaac 48
>gb|U31994.1|OSU31994 Oryza sativa MADS box protein OsMADS45 mRNA, complete cds Length = 1024 Score = 56.0 bits (28), Expect = 3e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||| |||||||| |||||||||||||||||||||| Sbjct: 64 ggtggagctgaagaggatcgagaacaagatcaaccg 99
>ref|XM_473638.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 750 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||||||||| |||||||||||||||||||| Sbjct: 20 agctgaagcgcatcgagaacaagatcaaccg 50
>gb|AY337929.1| Crocus sativus putative Apetala1-like MADS-box transcription factor (Kcap1b) mRNA, complete cds Length = 1175 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||||| ||||||||| Sbjct: 126 agctgaagcggatcgagaacacgatcaaccg 156
>gb|AY599763.1| Dendrocalamus latiflorus MADS10 protein (MADS10) mRNA, complete cds Length = 735 Score = 54.0 bits (27), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 119 gggaaggtgcagctgaagcggatcgagaacaagat 153 |||||||| ||||||||||||||||||||||||| Sbjct: 10 gggaaggtcgagctgaagcggatcgagaacaagat 44
>gb|AY551918.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS213 mRNA, complete cds Length = 1134 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||||||||| |||||||||||||||||||| Sbjct: 157 agctgaagcgcatcgagaacaagatcaaccg 187
>gb|AY551917.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS212 mRNA, complete cds Length = 1095 Score = 54.0 bits (27), Expect = 1e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||||||| |||||| ||| ||||||||||||||||||||| Sbjct: 101 gatggggcgaggcaaggtggtgcttcagcggatcgagaacaagatca 147
>emb|X80492.1|SLSLM5 S.latifolia SLM5 mRNA Length = 970 Score = 54.0 bits (27), Expect = 1e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaa 156 ||||||||||| | ||| || |||||| ||||||||||||||||||| Sbjct: 22 atggggcgaggtagggttcaactgaagaggatcgagaacaagatcaa 68
>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23, complete sequence Length = 149892 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||||||||| |||||||||||||||||||| Sbjct: 84637 agctgaagcgcatcgagaacaagatcaaccg 84667
>emb|AJ577375.1|TAE577375 Triticum aestivum partial mRNA for putative MADS-box transcription factor (mads#12 gene) Length = 540 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||||||||| |||||||||||||||||||| Sbjct: 136 agctgaagcgcatcgagaacaagatcaaccg 166
>emb|AJ430692.1|ZMA430692 Zea mays mRNA for putative MADS-domain transcription factor (m6 gene) Length = 1043 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||| |||||||||||||||||||||||||| Sbjct: 155 agctcaagcggatcgagaacaagatcaaccg 185
>gb|AY244507.1| Triticum monococcum cultivar G2528 MADS-box transcriptional factor (AGLG1) gene, complete cds Length = 6312 Score = 54.0 bits (27), Expect = 1e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 105 cggagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||||| || || |||||| |||| ||||||||||||||||||||| Sbjct: 361 cggagatgggtcgcggcaaggtggtgctgcagcggatcgagaacaagatca 411
>gb|AF372840.1|AF372840 Poa annua mads1 mRNA, complete cds Length = 1159 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||||||||| |||||||||||||||||||| Sbjct: 192 agctgaagcgcatcgagaacaagatcaaccg 222
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||||||||| |||||||||||||||||||| Sbjct: 29281591 agctgaagcgcatcgagaacaagatcaaccg 29281621 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 tcgctcgctcgctcgctgctg 81 ||||||||||||||||||||| Sbjct: 24976989 tcgctcgctcgctcgctgctg 24977009 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 59 ggtcgctcgctcgctcgct 77 ||||||||||||||||||| Sbjct: 25473895 ggtcgctcgctcgctcgct 25473877 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 60 gtcgctcgctcgctcgctg 78 ||||||||||||||||||| Sbjct: 24436425 gtcgctcgctcgctcgctg 24436443 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 cctccgcccgcgcctctcg 45 ||||||||||||||||||| Sbjct: 21289007 cctccgcccgcgcctctcg 21289025
>gb|AY198332.1| Lolium perenne MADS7 mRNA, complete cds Length = 1298 Score = 54.0 bits (27), Expect = 1e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 105 cggagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||||| || || |||||| |||| ||||||||||||||||||||| Sbjct: 255 cggagatgggtcgcggcaaggtggtgctgcagcggatcgagaacaagatca 305
>gb|AF305076.1|AF305076 Eucalyptus globulus MADS-box protein EAP1 mRNA, complete cds Length = 1085 Score = 54.0 bits (27), Expect = 1e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||| | |||| | ||||||||||| |||| ||||||||||||||||| Sbjct: 106 gatggggagggggaggctgcagctgaagaggatagagaacaagatcaaccg 156
>dbj|AB007505.1| Triticum aestivum TaMADS#12 mRNA for MADS box transcription factor, complete cds Length = 1176 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||||||||| |||||||||||||||||||| Sbjct: 155 agctgaagcgtatcgagaacaagatcaaccg 185
>dbj|AB089159.1| Houttuynia cordata HcSEP3 mRNA for MADS-box transcription factor, complete cds Length = 944 Score = 54.0 bits (27), Expect = 1e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||||| |||||| |||| |||||||| |||| ||||||||||| Sbjct: 41 gagatggggagagggagggtggagctgaagaggattgagaacaagat 87
>gb|AF109153.1|AF109153 Oryza sativa MADS box transcription factor MADS17 (MADS17) mRNA, complete cds Length = 1083 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||||||||| |||||||||||||||||||| Sbjct: 150 agctgaagcgcatcgagaacaagatcaaccg 180
>dbj|AK070540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023057B01, full insert sequence Length = 963 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||||||||| |||||||||||||||||||| Sbjct: 51 agctgaagcgcatcgagaacaagatcaaccg 81
>gb|AY104331.1| Zea mays PCO155219 mRNA sequence Length = 1056 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||| |||||||||||||||||||||||||| Sbjct: 162 agctcaagcggatcgagaacaagatcaaccg 192
>gb|L46397.1|MZEMADSA Zea mays MADS-box protein (ZAG3) mRNA, complete cds Length = 1262 Score = 54.0 bits (27), Expect = 1e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||| |||||||||||||||||||||||||| Sbjct: 191 agctcaagcggatcgagaacaagatcaaccg 221
>gb|AY538747.1| Vitis vinifera FUL-like protein mRNA, complete cds Length = 1029 Score = 52.0 bits (26), Expect = 5e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||| |||| | ||| ||| |||||||||||||||||||||||| Sbjct: 84 atggggagaggaagggttcagttgaagcggatcgagaacaagatca 129
>gb|AY599753.1| Dendrocalamus latiflorus MADS16 protein (MADS16) mRNA, complete cds Length = 687 Score = 52.0 bits (26), Expect = 5e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||| | |||||||| ||||||| ||||||||||||||||||| Sbjct: 1 atggggagggggaaggtcgagctgaaacggatcgagaacaagatca 46
>gb|AY599752.1| Dendrocalamus latiflorus MADS15 protein (MADS15) mRNA, complete cds Length = 687 Score = 52.0 bits (26), Expect = 5e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||| | |||||||| ||||||| ||||||||||||||||||| Sbjct: 1 atggggagggggaaggttgagctgaaacggatcgagaacaagatca 46
>emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box protein 7 (m7 gene) Length = 984 Score = 52.0 bits (26), Expect = 5e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||| || ||||||||| || ||| |||||||||||||||||| Sbjct: 66 agatgggtcgtgggaaggtggagatgaggcggatcgagaacaagat 111
>emb|X99654.1|BPMADS4GN Betula pendula mRNA for MADS box protein (MADS4 gene) Length = 998 Score = 52.0 bits (26), Expect = 5e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 ||||||||||| | ||| ||||| ||||| |||||||||||||||| Sbjct: 83 atggggcgaggtagggttcagcttaagcgaatcgagaacaagatca 128
>emb|AJ430640.1|ZMA430640 Zea mays mRNA for putative MADS-domain transcription factor (m31 gene) Length = 1303 Score = 52.0 bits (26), Expect = 5e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||||| || |||||| |||| ||||||||||||||||||||| Sbjct: 290 atggggcgcggcaaggtggtgctgcagcggatcgagaacaagatca 335
>emb|AJ419690.2|SCH419690 Saururus chinensis mRNA for putative MADS-box protein (mads669 gene) Length = 1175 Score = 52.0 bits (26), Expect = 5e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 |||||||| | |||| ||||||||||||| |||| ||||||||||| Sbjct: 168 agatggggagggggagggtgcagctgaagaggatagagaacaagat 213
>gb|AY275713.1| Vitis vinifera MADS-box protein 6 mRNA, complete cds Length = 995 Score = 52.0 bits (26), Expect = 5e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 |||||| |||| | ||| ||| |||||||||||||||||||||||| Sbjct: 55 atggggagaggaagggttcagttgaagcggatcgagaacaagatca 100
>gb|DQ205651.1| Malus x domestica MdMads2.2 protein gene, complete cds Length = 6167 Score = 52.0 bits (26), Expect = 5e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||||||||| |||| ||||||||||||||| Sbjct: 1781 ggtgcagctgaagaggattgagaacaagatcaac 1814
>gb|AY188330.1| Sorghum bicolor phytochelatin synthetase-like protein 1, phytochelatin synthetase-like protein 2, and cytochrome b5 (Cyb5) genes, complete cds; and MADS box protein AGLG1 (Aglg1) gene, partial cds Length = 23102 Score = 52.0 bits (26), Expect = 5e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatca 155 ||||| || ||||||||| |||| ||||||||||||||||||||| Sbjct: 21607 atgggccgcgggaaggtggtgctgcagcggatcgagaacaagatca 21652
>gb|AY850185.1| Persea americana AGL9.1 mRNA, complete cds Length = 971 Score = 52.0 bits (26), Expect = 5e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 132 tgaagcggatcgagaacaagatcaac 157 |||||||||||||||||||||||||| Sbjct: 86 tgaagcggatcgagaacaagatcaac 111
>gb|AY198334.1| Lolium perenne MADS9 mRNA, complete cds Length = 1121 Score = 52.0 bits (26), Expect = 5e-04 Identities = 41/46 (89%) Strand = Plus / Plus Query: 108 agatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||| || ||||||||| || ||| |||||||||||||||||| Sbjct: 56 agatgggtcgcgggaaggtggagatgaggcggatcgagaacaagat 101
>gb|DQ333323.1| Elaeis guineensis AGL6-like MADS-box transcription factor mRNA, complete cds Length = 848 Score = 52.0 bits (26), Expect = 5e-04 Identities = 44/50 (88%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 |||||| | ||||| ||| |||||||| |||| ||||||||||||||||| Sbjct: 7 atggggagggggaaagtggagctgaagaggattgagaacaagatcaaccg 56
>dbj|AB013107.1| Perilla frutescens PfSAH1 gene for SQUA-AP1 homolog, partial cds Length = 171 Score = 52.0 bits (26), Expect = 5e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||||||||| |||| ||||||||||||||| Sbjct: 15 ggtgcagctgaagaggatagagaacaagatcaac 48
>gb|U32110.1|SBU32110 Sorghum bicolor putative MADS box protein (SbMADS2) mRNA, partial cds Length = 1186 Score = 52.0 bits (26), Expect = 5e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 122 aaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||||| |||||||| ||||||||||| ||||| Sbjct: 3 aaggtgcagctcaagcggatagagaacaagataaaccg 40
>ref|XM_479092.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1088 Score = 50.1 bits (25), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||| ||||| |||||||||| |||||||||||||||||| Sbjct: 89 gatggggagagggccggtgcagctgcggcggatcgagaacaagat 133
>gb|AY599762.1| Dendrocalamus latiflorus MADS9 protein (MADS9) mRNA, complete cds Length = 735 Score = 50.1 bits (25), Expect = 0.002 Identities = 25/25 (100%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagat 153 ||||||||||||||||||||||||| Sbjct: 20 agctgaagcggatcgagaacaagat 44
>gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6-like protein mRNA, complete cds Length = 1464 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 131 ctgaagcggatcgagaacaagatcaaccg 159 |||||||| |||||||||||||||||||| Sbjct: 408 ctgaagcgcatcgagaacaagatcaaccg 436
>gb|AY383560.1| Asparagus officinalis MADS box protein (AOM4) mRNA, complete cds Length = 1104 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaac 157 |||||||| |||||||||||||||||||| Sbjct: 51 agctgaagaggatcgagaacaagatcaac 79
>gb|AY382400.1| Asparagus officinalis MADS box protein (AOM1) mRNA, complete cds Length = 1016 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaac 157 |||||||| |||||||||||||||||||| Sbjct: 65 agctgaagaggatcgagaacaagatcaac 93
>emb|AJ011675.1|OSA011675 Oryza sativa mRNA for MADS-box protein Length = 974 Score = 50.1 bits (25), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||| ||||| |||||||||| |||||||||||||||||| Sbjct: 76 gatggggagagggccggtgcagctgcggcggatcgagaacaagat 120
>emb|X99653.1|BPMADS3GN Betula pendula mRNA for MADS box protein (MADS3 gene) Length = 1160 Score = 50.1 bits (25), Expect = 0.002 Identities = 46/53 (86%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaaccg 159 ||||||||| | || | ||| |||||||||||||| ||||| ||||||||||| Sbjct: 148 gagatggggaggggtagggttcagctgaagcggatagagaataagatcaaccg 200
>emb|AJ252070.1|BPE252070 Betula pendula mRNA for MADS box protein (mads1 gene) Length = 969 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaac 157 |||||||| |||||||||||||||||||| Sbjct: 60 agctgaagaggatcgagaacaagatcaac 88
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaac 157 |||||||||| |||||||||||||||||| Sbjct: 27894623 agctgaagcgcatcgagaacaagatcaac 27894651 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 acctcgcctccgcccgcgcc 40 |||||||||||||||||||| Sbjct: 35694257 acctcgcctccgcccgcgcc 35694238 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 agcggagatggggcgaggg 121 ||||||||||||||||||| Sbjct: 34758325 agcggagatggggcgaggg 34758343 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 tcgctcgctcgctcgctgc 79 ||||||||||||||||||| Sbjct: 30453224 tcgctcgctcgctcgctgc 30453206 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 ccgccacctcgcctccgcc 34 ||||||||||||||||||| Sbjct: 28894582 ccgccacctcgcctccgcc 28894600
>dbj|AP004178.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_G04 Length = 124666 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaac 157 |||||||||| |||||||||||||||||| Sbjct: 22075 agctgaagcgcatcgagaacaagatcaac 22103
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 50.1 bits (25), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||| ||||| |||||||||| |||||||||||||||||| Sbjct: 90921 gatggggagagggccggtgcagctgcggcggatcgagaacaagat 90965
>gb|AF091458.1|AF091458 Oryza sativa MADS box transcription factor MADS18 (MADS18) mRNA, complete cds Length = 1031 Score = 50.1 bits (25), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||| ||||| |||||||||| |||||||||||||||||| Sbjct: 62 gatggggagagggccggtgcagctgcggcggatcgagaacaagat 106
>dbj|AK069103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023006N09, full insert sequence Length = 1134 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaac 157 |||||||||| |||||||||||||||||| Sbjct: 153 agctgaagcgcatcgagaacaagatcaac 181
>dbj|AK064704.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A02, full insert sequence Length = 1088 Score = 50.1 bits (25), Expect = 0.002 Identities = 40/45 (88%) Strand = Plus / Plus Query: 109 gatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||| ||||| |||||||||| |||||||||||||||||| Sbjct: 89 gatggggagagggccggtgcagctgcggcggatcgagaacaagat 133
>gb|AY821777.1| Magnolia grandiflora AP1-like protein (AP1) mRNA, partial cds Length = 939 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 128 cagctgaagcggatcgagaacaagatcaa 156 |||||||| |||||||||||||||||||| Sbjct: 1 cagctgaaacggatcgagaacaagatcaa 29
>gb|U78782.1|OSU78782 Oryza sativa MADS box protein (OsMADS6) mRNA, complete cds Length = 1043 Score = 50.1 bits (25), Expect = 0.002 Identities = 28/29 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaac 157 |||||||||| |||||||||||||||||| Sbjct: 53 agctgaagcgcatcgagaacaagatcaac 81
>dbj|AB022665.1| Gnetum parvifolium GpMADS3 mRNA, complete cds Length = 1180 Score = 50.1 bits (25), Expect = 0.002 Identities = 31/33 (93%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaa 156 ||||||||||| ||| ||||||||||||||||| Sbjct: 115 ggtgcagctgaggcgaatcgagaacaagatcaa 147
>emb|AJ132215.1|GGN132215 Gnetum gnemon mRNA for putative MADS domain transcription factor GGM9 Length = 1223 Score = 48.1 bits (24), Expect = 0.008 Identities = 30/32 (93%) Strand = Plus / Plus Query: 125 gtgcagctgaagcggatcgagaacaagatcaa 156 |||||||||| ||| ||||||||||||||||| Sbjct: 160 gtgcagctgaggcgaatcgagaacaagatcaa 191
>gb|DQ100376.1| Castanea mollissima MADS1 mRNA, complete cds Length = 925 Score = 48.1 bits (24), Expect = 0.008 Identities = 39/44 (88%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 |||||||| |||| |||| || |||||||||| ||||||||||| Sbjct: 18 atggggcgggggagggtggaggtgaagcggatagagaacaagat 61
>gb|AY040247.1| Antirrhinum majus MADS-box transcription factor DEFH28 mRNA, complete cds Length = 909 Score = 48.1 bits (24), Expect = 0.008 Identities = 39/44 (88%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 |||||| |||| | ||| |||||||| ||||||||||||||||| Sbjct: 1 atggggagaggtagggttcagctgaaacggatcgagaacaagat 44
>gb|AY850186.1| Persea americana AGL9.2 mRNA, complete cds Length = 971 Score = 48.1 bits (24), Expect = 0.008 Identities = 42/48 (87%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 |||||| |||| | |||| |||||||| |||| ||||||||||||||| Sbjct: 73 atggggagaggaagggtggagctgaagaggattgagaacaagatcaac 120
>gb|AY591333.1| Hyacinthus orientalis MADS-box protein (SEP1) mRNA, complete cds Length = 913 Score = 48.1 bits (24), Expect = 0.008 Identities = 42/48 (87%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaac 157 |||||| |||||| ||| |||||||| |||| ||||||||||||||| Sbjct: 25 atggggagagggagagtggagctgaagaggatagagaacaagatcaac 72
>dbj|AB029470.1| Ginkgo biloba mRNA for MADS-box transcription factor GbMADS8, complete cds Length = 1244 Score = 48.1 bits (24), Expect = 0.008 Identities = 27/28 (96%) Strand = Plus / Plus Query: 132 tgaagcggatcgagaacaagatcaaccg 159 |||||||||||||||||||||| ||||| Sbjct: 159 tgaagcggatcgagaacaagataaaccg 186
>gb|AF306349.1|AF306349 Eucalyptus globulus MADS box protein AP2L mRNA, complete cds Length = 1070 Score = 48.1 bits (24), Expect = 0.008 Identities = 39/44 (88%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 |||||| | |||| ||||||||||||| |||| ||||||||||| Sbjct: 184 atggggagggggagggtgcagctgaagaggatagagaacaagat 227
>gb|AF305696.1|AF305696 Eucalyptus globulus MADS-box protein EAP2S mRNA, complete cds, alternatively spliced Length = 1032 Score = 48.1 bits (24), Expect = 0.008 Identities = 39/44 (88%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 |||||| | |||| ||||||||||||| |||| ||||||||||| Sbjct: 184 atggggagggggagggtgcagctgaagaggatagagaacaagat 227
>gb|AY827472.1| Chasmanthium latifolium MADS box transcription factor mRNA, partial cds Length = 816 Score = 46.1 bits (23), Expect = 0.031 Identities = 26/27 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatca 155 |||||| |||||||||||||||||||| Sbjct: 2 agctgaggcggatcgagaacaagatca 28
>emb|X63701.1|AMSQUAMOS A.majus squamosa gene Length = 6420 Score = 46.1 bits (23), Expect = 0.031 Identities = 41/47 (87%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaa 156 |||||| ||||||| || || |||||| |||| |||||||||||||| Sbjct: 361 atggggagagggaaagtacaactgaagaggatagagaacaagatcaa 407
>emb|Y09611.1|PRMADS1 P.resinosa mRNA for MADS-box protein Length = 1073 Score = 46.1 bits (23), Expect = 0.031 Identities = 29/31 (93%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||| ||||| ||||| Sbjct: 95 agctgaagcggatcgagaataagattaaccg 125
>gb|AF373602.1| Vitis vinifera MADS-box protein 3 (MADS3) mRNA, complete cds Length = 1008 Score = 46.1 bits (23), Expect = 0.031 Identities = 29/31 (93%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||||||| |||| ||||||||||||||||| Sbjct: 118 agctgaagaggatagagaacaagatcaaccg 148
>gb|AF515007.1| Ginkgo biloba MADS box-like protein GBM10 gene, partial cds Length = 90 Score = 46.1 bits (23), Expect = 0.031 Identities = 23/23 (100%) Strand = Plus / Plus Query: 134 aagcggatcgagaacaagatcaa 156 ||||||||||||||||||||||| Sbjct: 1 aagcggatcgagaacaagatcaa 23
>gb|AF332885.1|AF332885 Secale cereale MADS-box transcription factor (MADS3) gene, partial sequence Length = 438 Score = 46.1 bits (23), Expect = 0.031 Identities = 29/31 (93%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 |||| ||||| |||||||||||||||||||| Sbjct: 2 agctcaagcgcatcgagaacaagatcaaccg 32
>gb|AY850182.1| Liriodendron tulipifera AGL9 mRNA, complete cds Length = 1221 Score = 46.1 bits (23), Expect = 0.031 Identities = 26/27 (96%) Strand = Plus / Plus Query: 131 ctgaagcggatcgagaacaagatcaac 157 |||||||||||||||||||| |||||| Sbjct: 125 ctgaagcggatcgagaacaaaatcaac 151
>gb|AY941800.1| Musa acuminata putative MADS box protein (MADS3) mRNA, partial cds Length = 844 Score = 46.1 bits (23), Expect = 0.031 Identities = 23/23 (100%) Strand = Plus / Plus Query: 137 cggatcgagaacaagatcaaccg 159 ||||||||||||||||||||||| Sbjct: 1 cggatcgagaacaagatcaaccg 23
>gb|AY198331.1| Lolium perenne MADS6 mRNA, complete cds Length = 969 Score = 46.1 bits (23), Expect = 0.031 Identities = 26/27 (96%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatca 155 |||||||||||||||| |||||||||| Sbjct: 116 agctgaagcggatcgacaacaagatca 142
>gb|U42400.1|PRU42400 Pinus radiata putative MADS-box family transcription factor (PrMADS2) mRNA, complete cds Length = 1064 Score = 46.1 bits (23), Expect = 0.031 Identities = 29/31 (93%) Strand = Plus / Plus Query: 129 agctgaagcggatcgagaacaagatcaaccg 159 ||||||||||||||||||| ||||| ||||| Sbjct: 114 agctgaagcggatcgagaataagattaaccg 144
>dbj|AB079261.1| Agapanthus praecox ApMADS3 mRNA for MADS-box transcription factor SEP1, complete cds Length = 1014 Score = 46.1 bits (23), Expect = 0.031 Identities = 41/47 (87%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaa 156 ||||||||||||| || |||||||| |||| |||||||||||||| Sbjct: 108 atggggcgagggagagttgagctgaagaggattgagaacaagatcaa 154
>gb|AF411848.1| Elaeis guineensis MADS box transcription factor (GLO2) mRNA, complete cds Length = 897 Score = 46.1 bits (23), Expect = 0.031 Identities = 38/43 (88%) Strand = Plus / Plus Query: 106 ggagatggggcgagggaaggtgcagctgaagcggatcgagaac 148 ||||||||||||||||||| | || | ||||||||||||||| Sbjct: 84 ggagatggggcgagggaagattgagatcaagcggatcgagaac 126
>gb|AF411846.1| Elaeis guineensis MADS box transcription factor (AGL2-4) mRNA, complete cds Length = 1121 Score = 46.1 bits (23), Expect = 0.031 Identities = 41/47 (87%) Strand = Plus / Plus Query: 107 gagatggggcgagggaaggtgcagctgaagcggatcgagaacaagat 153 ||||||||| | || | |||| |||||||| |||||||||||||||| Sbjct: 40 gagatggggaggggaagggtggagctgaagaggatcgagaacaagat 86
>emb|AM162213.1| Misopates orontium mRNA for squamosa protein (squa gene) Length = 2037 Score = 46.1 bits (23), Expect = 0.031 Identities = 41/47 (87%) Strand = Plus / Plus Query: 110 atggggcgagggaaggtgcagctgaagcggatcgagaacaagatcaa 156 |||||| ||||||| || || |||||| |||| |||||||||||||| Sbjct: 599 atggggagagggaaagtacaactgaagaggatagagaacaagatcaa 645
>ref|XM_463515.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 183 Score = 44.1 bits (22), Expect = 0.12 Identities = 22/22 (100%) Strand = Plus / Plus Query: 61 tcgctcgctcgctcgctgctgc 82 |||||||||||||||||||||| Sbjct: 13 tcgctcgctcgctcgctgctgc 34
>gb|AY947463.1| Prunus dulcis MADS-box transcription factor (MADS2) mRNA, complete cds Length = 1009 Score = 44.1 bits (22), Expect = 0.12 Identities = 31/34 (91%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||||||||| |||| || |||||||||||| Sbjct: 165 ggtgcagctgaagaggattgaaaacaagatcaac 198
>gb|AF273055.1| Homo sapiens CTCL tumor antigen HD-CL-02 mRNA, complete cds Length = 1465 Score = 44.1 bits (22), Expect = 0.12 Identities = 25/26 (96%) Strand = Plus / Minus Query: 55 tcgcggtcgctcgctcgctcgctgct 80 ||||| |||||||||||||||||||| Sbjct: 89 tcgcgctcgctcgctcgctcgctgct 64
>gb|AY071921.1| Malus x domestica AP1-like protein mRNA, complete cds Length = 831 Score = 44.1 bits (22), Expect = 0.12 Identities = 28/30 (93%) Strand = Plus / Plus Query: 128 cagctgaagcggatcgagaacaagatcaac 157 ||||||||||| || ||||||||||||||| Sbjct: 117 cagctgaagcgcatagagaacaagatcaac 146
>emb|AM076976.1| Prunus persica mRNA for putative MADS box protein Length = 1112 Score = 44.1 bits (22), Expect = 0.12 Identities = 31/34 (91%) Strand = Plus / Plus Query: 124 ggtgcagctgaagcggatcgagaacaagatcaac 157 ||||||||||||| |||| || |||||||||||| Sbjct: 343 ggtgcagctgaagaggattgaaaacaagatcaac 376
>emb|AL451069.34| Human DNA sequence from clone RP11-432J24 on chromosome 10 Contains the 3' end of gene LOC170394, four novel genes, gene LOC170393, the 5' end of the INPP5A gene for inositol polyphosphate-5-phosphatase 40kDa and five CpG islands, complete sequence Length = 149579 Score = 44.1 bits (22), Expect = 0.12 Identities = 25/26 (96%) Strand = Plus / Minus Query: 55 tcgcggtcgctcgctcgctcgctgct 80 ||||| |||||||||||||||||||| Sbjct: 120606 tcgcgctcgctcgctcgctcgctgct 120581 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 925,310 Number of Sequences: 3902068 Number of extensions: 925310 Number of successful extensions: 87625 Number of sequences better than 10.0: 436 Number of HSP's better than 10.0 without gapping: 447 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84099 Number of HSP's gapped (non-prelim): 3348 length of query: 159 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 137 effective length of database: 17,147,199,772 effective search space: 2349166368764 effective search space used: 2349166368764 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
