ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal41a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK112133.1| Ciona intestinalis cDNA, clone:cicl016b17, full ... 379 e-102
2ref|XM_392412.2| PREDICTED: Apis mellifera similar to GA18006-PA... 50 0.005
3gb|BC100044.1| Danio rerio wu:fb22a03, mRNA (cDNA clone IMAGE:72... 48 0.019
4gb|BC055257.1| Danio rerio wu:fb22a03, mRNA (cDNA clone IMAGE:38... 48 0.019
5ref|XM_682547.1| PREDICTED: Danio rerio wu:fb22a03 (wu:fb22a03),... 48 0.019
6emb|BX901966.21| Zebrafish DNA sequence from clone DKEY-119B16 i... 48 0.019
7ref|XM_420591.1| PREDICTED: Gallus gallus similar to septin 11 (... 46 0.077
8emb|BX930915.2| Gallus gallus finished cDNA, clone ChEST964e9 46 0.077
9gb|BC081662.1| Danio rerio wu:fb22a03, mRNA (cDNA clone IMAGE:70... 44 0.30
10ref|XM_968433.1| PREDICTED: Tribolium castaneum similar to CG966... 44 0.30
11gb|BC073250.1| Xenopus laevis hypothetical protein LOC443634, mR... 42 1.2
12gb|AY425123.1| Ochna sp. Davis 31-01 PHYC (PHYC) gene, partial cds 42 1.2
13gb|AY425122.1| Ochna multiflora PHYC (PHYC) gene, partial cds 42 1.2
14gb|AC121853.3| Mus musculus BAC clone RP24-96P15 from chromosome... 42 1.2
15gb|AC121869.2| Mus musculus BAC clone RP24-121C10 from 17, compl... 42 1.2
16gb|BC097541.1| Xenopus laevis hypothetical protein LOC443634, mR... 42 1.2
17ref|XM_682088.1| PREDICTED: Danio rerio similar to Wu:fb22a03 pr... 42 1.2
18emb|AL954767.11| Zebrafish DNA sequence from clone CH211-225B14 ... 42 1.2
19gb|AC165951.3| Mus musculus BAC clone RP24-137B13 from chromosom... 42 1.2
20gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.7
21gb|AC122941.3| Mus musculus BAC clone RP23-1E3 from chromosome 8... 40 4.7
22gb|AY814469.1| Schistosoma japonicum SJCHGC01523 protein mRNA, c... 40 4.7
23gb|AC135362.3| Mus musculus BAC clone RP23-286J13 from chromosom... 40 4.7
24gb|AC133009.2| Homo sapiens chromosome 3 clone RP11-20P3, comple... 40 4.7
25ref|XM_785860.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 4.7
26gb|AC025822.7| Homo sapiens chromosome 10 clone RP11-433J20, com... 40 4.7
27ref|NM_165578.1| Drosophila melanogaster Sep5 CG2916-RA, transcr... 40 4.7
28ref|NM_143704.1| Drosophila melanogaster Sep5 CG2916-RB, transcr... 40 4.7
29gb|AC020616.7| Mus musculus strain C57BL/6J clone RP23-3A24, com... 40 4.7
30gb|AY051754.1| Drosophila melanogaster LD28935 full length cDNA 40 4.7
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.7
32gb|AC007084.7|AC007084 Drosophila melanogaster, chromosome 2R, r... 40 4.7
33gb|AC103719.12| Homo sapiens chromosome 8, clone RP11-421P23, co... 40 4.7
34gb|AC153884.1| Mus musculus 6 BAC RP23-476E22 (Roswell Park Can... 40 4.7
35gb|AY811389.1| Schistosoma japonicum clone SJCHGC01524 unknown mRNA 40 4.7
36gb|AF167578.1|AF167578 Drosophila melanogaster Sep5 (sep5) mRNA,... 40 4.7
37gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11... 40 4.7
38gb|AC005448.1|AC005448 Drosophila melanogaster, chromosome 2R, r... 40 4.7
39gb|AC113317.8| Mus musculus chromosome 5, clone RP23-442G8, comp... 40 4.7
40emb|AL929421.7| Mouse DNA sequence from clone RP23-284N23 on chr... 40 4.7
41emb|AJ239078.1|TPY239078 Tetrahymena pyriformis partial mRNA for... 40 4.7

>dbj|AK112133.1| Ciona intestinalis cDNA, clone:cicl016b17, full insert sequence
          Length = 2274

 Score =  379 bits (191), Expect = e-102
 Identities = 215/221 (97%), Gaps = 2/221 (0%)
 Strand = Plus / Plus

                                                                       
Query: 137 cttaagcttactatagtagattctgngggctttggtgatcaaattaacaaagaagaaagt 196
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 15  cttaagcttactatagtagattctgtgggctttggtgatcaaattaacaaagaagaaagt 74

                                                                       
Query: 197 ttcaagcctgttgttgagtatatcaaccagcaatttgaaaantacctacaggaagagcta 256
           |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 75  ttcaagcctgttgttgagtatatcaaccagcagtttgaaaattacctacaggaagagcta 134

                                                                       
Query: 257 aaaatttgcaggtcactgttcagttatcatgacacaagaattcatgctttgtctctattt 316
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 135 aaaatttgcaggtcactgttcagttatcatgacacaagaattcatgc-ttgtctctattt 193

                                                    
Query: 317 catttcaccaactggacatgggccccaaatctttggatctc 357
           ||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 194 catttcaccaactggacat-ggcctcaaatctttggatctc 233



to top

>ref|XM_392412.2| PREDICTED: Apis mellifera similar to GA18006-PA (LOC408882), mRNA
          Length = 2140

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 173 gatcaaattaacaaagaagaaagtttcaagcctgttgttga 213
           |||||||||||||||||||| ||||| ||  ||||||||||
Sbjct: 326 gatcaaattaacaaagaagatagttttaaagctgttgttga 366



to top

>gb|BC100044.1| Danio rerio wu:fb22a03, mRNA (cDNA clone IMAGE:7282994), partial
           cds
          Length = 1985

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 80/99 (80%)
 Strand = Plus / Plus

                                                                       
Query: 163 gggctttggtgatcaaattaacaaagaagaaagtttcaagcctgttgttgagtatatcaa 222
           ||||||||| || ||||| |||||||||||||| |  || ||  |||| || |||||| |
Sbjct: 377 gggctttggggaccaaatcaacaaagaagaaagctataaacccattgtggactatatcga 436

                                                  
Query: 223 ccagcaatttgaaaantacctacaggaagagctaaaaat 261
           |   || |||||||| ||||| ||||||||||| |||||
Sbjct: 437 cacacagtttgaaaactacctgcaggaagagctgaaaat 475



to top

>gb|BC055257.1| Danio rerio wu:fb22a03, mRNA (cDNA clone IMAGE:3816536), partial
           cds
          Length = 2062

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 80/99 (80%)
 Strand = Plus / Plus

                                                                       
Query: 163 gggctttggtgatcaaattaacaaagaagaaagtttcaagcctgttgttgagtatatcaa 222
           ||||||||| || ||||| |||||||||||||| |  || ||  |||| || |||||| |
Sbjct: 411 gggctttggggaccaaatcaacaaagaagaaagctataaacccattgtggactatatcga 470

                                                  
Query: 223 ccagcaatttgaaaantacctacaggaagagctaaaaat 261
           |   || |||||||| ||||| ||||||||||| |||||
Sbjct: 471 cacacagtttgaaaactacctgcaggaagagctgaaaat 509



to top

>ref|XM_682547.1| PREDICTED: Danio rerio wu:fb22a03 (wu:fb22a03), mRNA
          Length = 1599

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 80/99 (80%)
 Strand = Plus / Plus

                                                                       
Query: 163 gggctttggtgatcaaattaacaaagaagaaagtttcaagcctgttgttgagtatatcaa 222
           ||||||||| || ||||| |||||||||||||| |  || ||  |||| || |||||| |
Sbjct: 483 gggctttggggaccaaatcaacaaagaagaaagctataaacccattgtggactatatcga 542

                                                  
Query: 223 ccagcaatttgaaaantacctacaggaagagctaaaaat 261
           |   || |||||||| ||||| ||||||||||| |||||
Sbjct: 543 cacacagtttgaaaactacctgcaggaagagctgaaaat 581



to top

>emb|BX901966.21| Zebrafish DNA sequence from clone DKEY-119B16 in linkage group 14,
             complete sequence
          Length = 145325

 Score = 48.1 bits (24), Expect = 0.019
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                             
Query: 167   tttggtgatcaaattaacaaagaagaaagttt 198
             |||||||| ||||| |||||||||||||||||
Sbjct: 56368 tttggtgaacaaatcaacaaagaagaaagttt 56399



to top

>ref|XM_420591.1| PREDICTED: Gallus gallus similar to septin 11 (LOC422635), mRNA
          Length = 2500

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                        
Query: 272  ctgttcagttatcatgacacaagaattcatgctttgtctctatttcatttcaccaactgg 331
            ||||||| ||| || ||||| ||||||||||| | | || ||||||||| ||||||||||
Sbjct: 1021 ctgttcaattaccacgacaccagaattcatgcct-gcctgtatttcattgcaccaactgg 1079

               
Query: 332  aca 334
            |||
Sbjct: 1080 aca 1082



to top

>emb|BX930915.2| Gallus gallus finished cDNA, clone ChEST964e9
          Length = 823

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 54/63 (85%), Gaps = 1/63 (1%)
 Strand = Plus / Plus

                                                                       
Query: 272 ctgttcagttatcatgacacaagaattcatgctttgtctctatttcatttcaccaactgg 331
           ||||||| ||| || ||||| ||||||||||| | | || ||||||||| ||||||||||
Sbjct: 314 ctgttcaattaccacgacaccagaattcatgcct-gcctgtatttcattgcaccaactgg 372

              
Query: 332 aca 334
           |||
Sbjct: 373 aca 375



to top

>gb|BC081662.1| Danio rerio wu:fb22a03, mRNA (cDNA clone IMAGE:7047588), partial
           cds
          Length = 2004

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 75/93 (80%)
 Strand = Plus / Plus

                                                                       
Query: 163 gggctttggtgatcaaattaacaaagaagaaagtttcaagcctgttgttgagtatatcaa 222
           ||||||||| || ||||| |||||||||||||| |  || ||  |||| || |||||| |
Sbjct: 382 gggctttggggaccaaatcaacaaagaagaaagctataaacccattgtggactatatcga 441

                                            
Query: 223 ccagcaatttgaaaantacctacaggaagagct 255
           |   || |||||||| ||||| |||||||||||
Sbjct: 442 cacacagtttgaaaactacctgcaggaagagct 474



to top

>ref|XM_968433.1| PREDICTED: Tribolium castaneum similar to CG9663-PA (LOC662332),
           mRNA
          Length = 1968

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 13  ggtaaatcaacccttatgaata 34
           ||||||||||||||||||||||
Sbjct: 271 ggtaaatcaacccttatgaata 292



to top

>gb|BC073250.1| Xenopus laevis hypothetical protein LOC443634, mRNA (cDNA clone
           IMAGE:5505926), partial cds
          Length = 1185

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 179 attaacaaagaagaaagtttcaagcctgttgttgagt 215
           |||||||||||||| |||| ||| ||| |||||||||
Sbjct: 518 attaacaaagaagacagttacaaacctattgttgagt 554



to top

>gb|AY425123.1| Ochna sp. Davis 31-01 PHYC (PHYC) gene, partial cds
          Length = 1177

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 167 tttggtgatcaaattaacaaagaag 191
           ||||||| |||||||||||||||||
Sbjct: 628 tttggtgttcaaattaacaaagaag 652



to top

>gb|AY425122.1| Ochna multiflora PHYC (PHYC) gene, partial cds
          Length = 1177

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 167 tttggtgatcaaattaacaaagaag 191
           ||||||| |||||||||||||||||
Sbjct: 628 tttggtgttcaaattaacaaagaag 652



to top

>gb|AC121853.3| Mus musculus BAC clone RP24-96P15 from chromosome 17, complete sequence
          Length = 144510

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 89    ttaaactaaaggcaaatacat 109
             |||||||||||||||||||||
Sbjct: 70591 ttaaactaaaggcaaatacat 70571



to top

>gb|AC121869.2| Mus musculus BAC clone RP24-121C10 from 17, complete sequence
          Length = 182237

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 89     ttaaactaaaggcaaatacat 109
              |||||||||||||||||||||
Sbjct: 147210 ttaaactaaaggcaaatacat 147230



to top

>gb|BC097541.1| Xenopus laevis hypothetical protein LOC443634, mRNA (cDNA clone
           MGC:114670 IMAGE:5515183), complete cds
          Length = 1809

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                
Query: 179 attaacaaagaagaaagtttcaagcctgttgttgagt 215
           |||||||||||||| |||| ||| ||| |||||||||
Sbjct: 330 attaacaaagaagacagttacaaacctattgttgagt 366



to top

>ref|XM_682088.1| PREDICTED: Danio rerio similar to Wu:fb22a03 protein (LOC558821),
           mRNA
          Length = 839

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 163 gggctttggtgatcaaattaacaaagaagaaag 195
           ||||||||| || ||||| ||||||||||||||
Sbjct: 423 gggctttggggaccaaatcaacaaagaagaaag 455



to top

>emb|AL954767.11| Zebrafish DNA sequence from clone CH211-225B14 in linkage group 21,
             complete sequence
          Length = 182923

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 163   gggctttggtgatcaaattaacaaagaagaaag 195
             ||||||||| || ||||| ||||||||||||||
Sbjct: 85942 gggctttggggaccaaatcaacaaagaagaaag 85910



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 230   tttgaaaantacctacaggaagagctaaaaat 261
             |||||||| ||||| ||||||||||| |||||
Sbjct: 82993 tttgaaaactacctgcaggaagagctgaaaat 82962



to top

>gb|AC165951.3| Mus musculus BAC clone RP24-137B13 from chromosome 17, complete sequence
          Length = 209191

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 78     catgccaggtgttaaactaaaggcaaata 106
              ||||||||||| |||| ||||||||||||
Sbjct: 145024 catgccaggtggtaaattaaaggcaaata 144996



to top

>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03,
             complete sequence
          Length = 121466

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 177   aaattaacaaagaagaaagtttca 200
             ||||||||||| ||||||||||||
Sbjct: 35109 aaattaacaaaaaagaaagtttca 35086



to top

>gb|AC122941.3| Mus musculus BAC clone RP23-1E3 from chromosome 8, complete sequence
          Length = 244220

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   tgctttgtctctatttcatt 320
             ||||||||||||||||||||
Sbjct: 87379 tgctttgtctctatttcatt 87398



to top

>gb|AY814469.1| Schistosoma japonicum SJCHGC01523 protein mRNA, complete cds
          Length = 1509

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 45/52 (86%), Gaps = 1/52 (1%)
 Strand = Plus / Plus

                                                               
Query: 283 tcatgacacaagaattcatgctttgtctctatttcatttcaccaactggaca 334
           ||||||||||||| ||||||| ||| || ||||||||| |||| || |||||
Sbjct: 436 tcatgacacaagagttcatgc-ttgcctttatttcattgcacccaccggaca 486



to top

>gb|AC135362.3| Mus musculus BAC clone RP23-286J13 from chromosome 8, complete sequence
          Length = 173357

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    tgctttgtctctatttcatt 320
              ||||||||||||||||||||
Sbjct: 166201 tgctttgtctctatttcatt 166182



to top

>gb|AC133009.2| Homo sapiens chromosome 3 clone RP11-20P3, complete sequence
          Length = 23373

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 167   tttggtgatcaaattaacaaagaagaaa 194
             |||||| |||| ||||||||||||||||
Sbjct: 15015 tttggttatcatattaacaaagaagaaa 15042



to top

>ref|XM_785860.1| PREDICTED: Strongylocentrotus purpuratus similar to septin 6
           (LOC586062), mRNA
          Length = 1377

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 92  aactaaaggcaaatacatatgagctgca 119
           |||| ||||| |||||||||||||||||
Sbjct: 306 aactcaaggctaatacatatgagctgca 333



to top

>gb|AC025822.7| Homo sapiens chromosome 10 clone RP11-433J20, complete sequence
          Length = 220031

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 304    tttgtctctatttcatttca 323
              ||||||||||||||||||||
Sbjct: 199498 tttgtctctatttcatttca 199517



to top

>ref|NM_165578.1| Drosophila melanogaster Sep5 CG2916-RA, transcript variant A
           (Sep5), mRNA
          Length = 1750

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                               
Query: 97  aaggcaaatacatatgagctgcaaggaaagcaacgt 132
           |||||||||||||| ||||||| |||| ||||||||
Sbjct: 480 aaggcaaatacatacgagctgc-aggagagcaacgt 514



to top

>ref|NM_143704.1| Drosophila melanogaster Sep5 CG2916-RB, transcript variant B
           (Sep5), mRNA
          Length = 1739

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                               
Query: 97  aaggcaaatacatatgagctgcaaggaaagcaacgt 132
           |||||||||||||| ||||||| |||| ||||||||
Sbjct: 469 aaggcaaatacatacgagctgc-aggagagcaacgt 503



to top

>gb|AC020616.7| Mus musculus strain C57BL/6J clone RP23-3A24, complete sequence
          Length = 191243

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   atcaaattaacaaagaagaa 193
             ||||||||||||||||||||
Sbjct: 37155 atcaaattaacaaagaagaa 37174



to top

>gb|AY051754.1| Drosophila melanogaster LD28935 full length cDNA
          Length = 1698

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                               
Query: 97  aaggcaaatacatatgagctgcaaggaaagcaacgt 132
           |||||||||||||| ||||||| |||| ||||||||
Sbjct: 476 aaggcaaatacatacgagctgc-aggagagcaacgt 510



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 177      aaattaacaaagaagaaagtttca 200
                ||||||||||| ||||||||||||
Sbjct: 24148871 aaattaacaaaaaagaaagtttca 24148848



to top

>gb|AC007084.7|AC007084 Drosophila melanogaster, chromosome 2R, region 43F-44A, BAC clone
             BACR26A16, complete sequence
          Length = 139410

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                                 
Query: 97    aaggcaaatacatatgagctgcaaggaaagcaacgt 132
             |||||||||||||| ||||||| |||| ||||||||
Sbjct: 19243 aaggcaaatacatacgagctgc-aggagagcaacgt 19277



to top

>gb|AC103719.12| Homo sapiens chromosome 8, clone RP11-421P23, complete sequence
          Length = 167878

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    aaaaatttgcaggtcactgt 275
              ||||||||||||||||||||
Sbjct: 105047 aaaaatttgcaggtcactgt 105066



to top

>gb|AC153884.1| Mus musculus  6 BAC RP23-476E22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 195597

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    acatatgagctgcaaggaaa 125
              ||||||||||||||||||||
Sbjct: 119188 acatatgagctgcaaggaaa 119207



to top

>gb|AY811389.1| Schistosoma japonicum clone SJCHGC01524 unknown mRNA
          Length = 746

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 45/52 (86%), Gaps = 1/52 (1%)
 Strand = Plus / Plus

                                                               
Query: 283 tcatgacacaagaattcatgctttgtctctatttcatttcaccaactggaca 334
           ||||||||||||| ||||||| ||| || ||||||||| |||| || |||||
Sbjct: 478 tcatgacacaagagttcatgc-ttgcctttatttcattgcacccaccggaca 528



to top

>gb|AF167578.1|AF167578 Drosophila melanogaster Sep5 (sep5) mRNA, complete cds
          Length = 1706

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Plus

                                               
Query: 97  aaggcaaatacatatgagctgcaaggaaagcaacgt 132
           |||||||||||||| ||||||| |||| ||||||||
Sbjct: 426 aaggcaaatacatacgagctgc-aggagagcaacgt 460



to top

>gb|AE003839.4| Drosophila melanogaster chromosome 2R, section 11 of 73 of the complete
              sequence
          Length = 254177

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                  
Query: 97     aaggcaaatacatatgagctgcaaggaaagcaacgt 132
              |||||||||||||| ||||||| |||| ||||||||
Sbjct: 172945 aaggcaaatacatacgagctgc-aggagagcaacgt 172911



to top

>gb|AC005448.1|AC005448 Drosophila melanogaster, chromosome 2R, region 44A2-44A3, P1 clone
             DS06886, complete sequence
          Length = 86889

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 33/36 (91%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                                 
Query: 97    aaggcaaatacatatgagctgcaaggaaagcaacgt 132
             |||||||||||||| ||||||| |||| ||||||||
Sbjct: 36119 aaggcaaatacatacgagctgc-aggagagcaacgt 36085



to top

>gb|AC113317.8| Mus musculus chromosome 5, clone RP23-442G8, complete sequence
          Length = 193961

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    aacaaagaagaaagtttcaa 201
              ||||||||||||||||||||
Sbjct: 157829 aacaaagaagaaagtttcaa 157848



to top

>emb|AL929421.7| Mouse DNA sequence from clone RP23-284N23 on chromosome 2, complete
             sequence
          Length = 102530

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   atcaaattaacaaagaagaa 193
             ||||||||||||||||||||
Sbjct: 67735 atcaaattaacaaagaagaa 67754



to top

>emb|AJ239078.1|TPY239078 Tetrahymena pyriformis partial mRNA for guanylyl cyclase, isoform 3
           (gc3 gene)
          Length = 198

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 43  aataccaattttgagaatga 62
           ||||||||||||||||||||
Sbjct: 138 aataccaattttgagaatga 119


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,626,421
Number of Sequences: 3902068
Number of extensions: 3626421
Number of successful extensions: 69450
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 69368
Number of HSP's gapped (non-prelim): 89
length of query: 357
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 335
effective length of database: 17,147,199,772
effective search space: 5744311923620
effective search space used: 5744311923620
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top