>ref|XM_550208.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 869

 Score =  135 bits (68), Expect = 1e-28
 Identities = 142/167 (85%)
 Strand = Plus / Plus

                                                                       
Query: 193 ctggaagatcaggtcaccgncgggatcttcttggccgggaaaacaaagaagtactgggtg 252
           |||||||||||| ||  |  ||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 226 ctggaagatcagatctacaccggcatcttcttggcagggaaaacaaagaagtactgggtg 285

                                                                       
Query: 253 gacgagaggaccaggcacaactgcttcatgttgttccctagaggcctggccatcacctgg 312
           || ||||| || ||| |||||||||||||| |||| || |||||| || | ||||| |||
Sbjct: 286 gatgagagaactaggaacaactgcttcatgctgtttcccagaggcttgtctatcacttgg 345

                                                          
Query: 313 agcgaagaccccaagtactggacttggcaccccctgaaagaaggaag 359
           || ||||||||||  | |||||||||| | || ||||||||||||||
Sbjct: 346 agtgaagaccccagattctggacttggaaacctctgaaagaaggaag 392

>dbj|AK102322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090J07, full
           insert sequence
          Length = 944

 Score =  135 bits (68), Expect = 1e-28
 Identities = 142/167 (85%)
 Strand = Plus / Plus

                                                                       
Query: 193 ctggaagatcaggtcaccgncgggatcttcttggccgggaaaacaaagaagtactgggtg 252
           |||||||||||| ||  |  ||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 301 ctggaagatcagatctacaccggcatcttcttggcagggaaaacaaagaagtactgggtg 360

                                                                       
Query: 253 gacgagaggaccaggcacaactgcttcatgttgttccctagaggcctggccatcacctgg 312
           || ||||| || ||| |||||||||||||| |||| || |||||| || | ||||| |||
Sbjct: 361 gatgagagaactaggaacaactgcttcatgctgtttcccagaggcttgtctatcacttgg 420

                                                          
Query: 313 agcgaagaccccaagtactggacttggcaccccctgaaagaaggaag 359
           || ||||||||||  | |||||||||| | || ||||||||||||||
Sbjct: 421 agtgaagaccccagattctggacttggaaacctctgaaagaaggaag 467

>dbj|AK063812.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G12, full
           insert sequence
          Length = 869

 Score =  135 bits (68), Expect = 1e-28
 Identities = 142/167 (85%)
 Strand = Plus / Plus

                                                                       
Query: 193 ctggaagatcaggtcaccgncgggatcttcttggccgggaaaacaaagaagtactgggtg 252
           |||||||||||| ||  |  ||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 226 ctggaagatcagatctacaccggcatcttcttggcagggaaaacaaagaagtactgggtg 285

                                                                       
Query: 253 gacgagaggaccaggcacaactgcttcatgttgttccctagaggcctggccatcacctgg 312
           || ||||| || ||| |||||||||||||| |||| || |||||| || | ||||| |||
Sbjct: 286 gatgagagaactaggaacaactgcttcatgctgtttcccagaggcttgtctatcacttgg 345

                                                          
Query: 313 agcgaagaccccaagtactggacttggcaccccctgaaagaaggaag 359
           || ||||||||||  | |||||||||| | || ||||||||||||||
Sbjct: 346 agtgaagaccccagattctggacttggaaacctctgaaagaaggaag 392

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                           
Query: 239     agaagtactgggtggacgagaggaccaggcacaactgcttcatgttgttccctagaggcc 298
               |||||||||||||||| ||||| || ||| |||||||||||||| |||| || |||||| 
Sbjct: 3058272 agaagtactgggtggatgagagaactaggaacaactgcttcatgctgtttcccagaggct 3058213

                                                                           
Query: 299     tggccatcacctggagcgaagaccccaagtactggacttggcaccccctgaaagaaggaa 358
               || | ||||| ||||| ||||||||||  | |||||||||| | || |||||||||||||
Sbjct: 3058212 tgtctatcacttggagtgaagaccccagattctggacttggaaacctctgaaagaaggaa 3058153

                 
Query: 359     gg 360
               ||
Sbjct: 3058152 gg 3058151



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                               
Query: 193     ctggaagatcaggtcaccgncgggatcttcttggccgggaaaacaaag 240
               |||||||||||| ||  |  ||| ||||||||||| ||||||||||||
Sbjct: 3058418 ctggaagatcagatctacaccggcatcttcttggcagggaaaacaaag 3058371

>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0041E11
          Length = 146335

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                        
Query: 239  agaagtactgggtggacgagaggaccaggcacaactgcttcatgttgttccctagaggcc 298
            |||||||||||||||| ||||| || ||| |||||||||||||| |||| || |||||| 
Sbjct: 2060 agaagtactgggtggatgagagaactaggaacaactgcttcatgctgtttcccagaggct 2001

                                                                        
Query: 299  tggccatcacctggagcgaagaccccaagtactggacttggcaccccctgaaagaaggaa 358
            || | ||||| ||||| ||||||||||  | |||||||||| | || |||||||||||||
Sbjct: 2000 tgtctatcacttggagtgaagaccccagattctggacttggaaacctctgaaagaaggaa 1941

              
Query: 359  gg 360
            ||
Sbjct: 1940 gg 1939



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 193  ctggaagatcaggtcaccgncgggatcttcttggccgggaaaacaaag 240
            |||||||||||| ||  |  ||| ||||||||||| ||||||||||||
Sbjct: 2206 ctggaagatcagatctacaccggcatcttcttggcagggaaaacaaag 2159

>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0433F09
          Length = 150150

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                         
Query: 239   agaagtactgggtggacgagaggaccaggcacaactgcttcatgttgttccctagaggcc 298
             |||||||||||||||| ||||| || ||| |||||||||||||| |||| || |||||| 
Sbjct: 26312 agaagtactgggtggatgagagaactaggaacaactgcttcatgctgtttcccagaggct 26253

                                                                         
Query: 299   tggccatcacctggagcgaagaccccaagtactggacttggcaccccctgaaagaaggaa 358
             || | ||||| ||||| ||||||||||  | |||||||||| | || |||||||||||||
Sbjct: 26252 tgtctatcacttggagtgaagaccccagattctggacttggaaacctctgaaagaaggaa 26193

               
Query: 359   gg 360
             ||
Sbjct: 26192 gg 26191



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 193   ctggaagatcaggtcaccgncgggatcttcttggccgggaaaacaaag 240
             |||||||||||| ||  |  ||| ||||||||||| ||||||||||||
Sbjct: 26458 ctggaagatcagatctacaccggcatcttcttggcagggaaaacaaag 26411

>gb|AC009522.11| Homo sapiens 12 BAC RP11-591N1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128666

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 229   gggaaaacaaagaagtactgggtgg 253
             ||||||||||||||| |||||||||
Sbjct: 25330 gggaaaacaaagaagaactgggtgg 25354

>gb|DQ058416.1| Rhizobium etli strain 8C-3 plasmid clone REB02, partial sequence
          Length = 190912

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    gtcgtgccgacggcgctcag 83
             ||||||||||||||||||||
Sbjct: 22280 gtcgtgccgacggcgctcag 22299

>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01,
              complete sequence
          Length = 173074

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 32     cctccgcctcctcacccaccgcgg 55
              ||||||||||||| ||||||||||
Sbjct: 155220 cctccgcctcctcccccaccgcgg 155243

>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0092E21, complete sequence
          Length = 132649

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 32    cctccgcctcctcacccaccgcgg 55
             ||||||||||||| ||||||||||
Sbjct: 26954 cctccgcctcctcccccaccgcgg 26977

>gb|AE008935.1| Agrobacterium tumefaciens str. C58 AT plasmid section 10 of 49 of the
            complete sequence
          Length = 13029

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   gtcgtgccgacggcgctcag 83
            ||||||||||||||||||||
Sbjct: 6829 gtcgtgccgacggcgctcag 6810

>gb|AE007883.1| Agrobacterium tumefaciens str. C58 plasmid AT, section 11 of 50 of
            the complete sequence
          Length = 12612

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   gtcgtgccgacggcgctcag 83
            ||||||||||||||||||||
Sbjct: 6412 gtcgtgccgacggcgctcag 6393

>ref|XM_806090.1| Trypanosoma cruzi strain CL Brener Unc104-like kinesin
           (Tc00.1047053510687.100) partial mRNA
          Length = 2196

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 312 gagcgaagaccccaagtact 331
           ||||||||||||||||||||
Sbjct: 753 gagcgaagaccccaagtact 734

>ref|XM_764361.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_177_679_2166)
            partial mRNA
          Length = 1488

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 146  tgctccgggagatcgtcgcc 165
            ||||||||||||||||||||
Sbjct: 1454 tgctccgggagatcgtcgcc 1473

>dbj|AB187566.1| Murine leukemia virus Graffi GV-1.4 DNA, complete genome
          Length = 8259

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 232  aaaacaaagaagtactgggt 251
            ||||||||||||||||||||
Sbjct: 4686 aaaacaaagaagtactgggt 4705

>dbj|AB187565.1| Murine leukemia virus Graffi GV-1.2 DNA, complete genome
          Length = 8319

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 232  aaaacaaagaagtactgggt 251
            ||||||||||||||||||||
Sbjct: 4687 aaaacaaagaagtactgggt 4706

>gb|AC016994.8| Homo sapiens BAC clone RP11-19J8 from 2, complete sequence
          Length = 48827

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   gttccctagaggcctggcca 304
             ||||||||||||||||||||
Sbjct: 33620 gttccctagaggcctggcca 33601

>gb|AF141932.2|AF141932 Rhizobium leguminosarum bv. trifolii bacteriocin gene cluster,
            complete sequence
          Length = 18282

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 189  cgcgctggaagatcaggtca 208
            ||||||||||||||||||||
Sbjct: 6634 cgcgctggaagatcaggtca 6615

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 32       cctccgcctcctcacccaccgcgg 55
                ||||||||||||| ||||||||||
Sbjct: 20483475 cctccgcctcctcccccaccgcgg 20483498

>gb|AF019230.1|AF019230 Murine leukemia virus strain SRS 19-6 complete genome
          Length = 8256

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 232  aaaacaaagaagtactgggt 251
            ||||||||||||||||||||
Sbjct: 4689 aaaacaaagaagtactgggt 4708

>gb|AE004446.1| Pseudomonas aeruginosa PAO1, section 7 of 529 of the complete genome
          Length = 19762

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 173  atgtcaccgacgtagccgcgctgg 196
            |||||||||||| |||||||||||
Sbjct: 4050 atgtcaccgacgaagccgcgctgg 4073

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 5       gggcggcgccgtcgcgaccg 24
               ||||||||||||||||||||
Sbjct: 3213569 gggcggcgccgtcgcgaccg 3213588



 Score = 40.1 bits (20), Expect = 5.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 147     gctccgggagatcgtcgccg 166
               ||||||||||||||||||||
Sbjct: 2699045 gctccgggagatcgtcgccg 2699026

>dbj|AK070104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045K24, full
            insert sequence
          Length = 3603

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   cctccgcctcctcacccaccgcgg 55
            ||||||||||||| ||||||||||
Sbjct: 3174 cctccgcctcctcccccaccgcgg 3197

>gb|AY104612.1| Zea mays PCO113007 mRNA sequence
          Length = 1164

 Score = 40.1 bits (20), Expect = 5.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 25  gaggcgtcctccgcctcctcaccc 48
           |||||||||||| |||||||||||
Sbjct: 258 gaggcgtcctcctcctcctcaccc 235


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,913,852
Number of Sequences: 3902068
Number of extensions: 2913852
Number of successful extensions: 52728
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52529
Number of HSP's gapped (non-prelim): 199
length of query: 373
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 351
effective length of database: 17,147,199,772
effective search space: 6018667119972
effective search space used: 6018667119972
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)