ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal40k08 |
|---|---|
| Clone Library Name | barley_pub |
>SNX4_MAGGR (Q522W5) Sorting nexin-4 (Autophagy-related protein 24)| Length = 495 Score = 39.3 bits (90), Expect = 0.005 Identities = 20/47 (42%), Positives = 27/47 (57%) Frame = +3 Query: 3 HDFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLTEPGAIAAFQGEA 143 +DF S+R +L+R+L R A HPV+ S L TFL P A + A Sbjct: 144 NDFTSRRAYSLRRFLARCALHPVLRRSAILHTFLESPDWNATMRSRA 190
>SNX2_MOUSE (Q9CWK8) Sorting nexin-2| Length = 519 Score = 39.3 bits (90), Expect = 0.005 Identities = 17/33 (51%), Positives = 22/33 (66%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFL 104 +FV +R AL+RYL+R HP + PDLR FL Sbjct: 230 EFVEKRRAALERYLQRTVKHPTLLQDPDLRQFL 262
>SNX2_HUMAN (O60749) Sorting nexin-2| Length = 519 Score = 39.3 bits (90), Expect = 0.005 Identities = 17/33 (51%), Positives = 22/33 (66%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFL 104 +FV +R AL+RYL+R HP + PDLR FL Sbjct: 230 EFVEKRRAALERYLQRTVKHPTLLQDPDLRQFL 262
>SNX4_ASHGO (Q75C43) Sorting nexin-4 (Autophagy-related protein 24)| Length = 410 Score = 38.5 bits (88), Expect = 0.008 Identities = 17/32 (53%), Positives = 23/32 (71%) Frame = +3 Query: 9 FVSQRCTALQRYLRRLAAHPVVAASPDLRTFL 104 F +RC +LQ +L+RLA HPV++ S L TFL Sbjct: 97 FTQKRCHSLQNFLQRLAQHPVLSQSKILHTFL 128
>SNX4_ASPFU (Q4WQI6) Sorting nexin-4 (Autophagy-related protein 24)| Length = 497 Score = 38.1 bits (87), Expect = 0.011 Identities = 37/149 (24%), Positives = 57/149 (38%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLTEPGAIAAFQGEAPQHWTTTVNAAIPQ 185 +F S+R +L R+L+RL HPV+ +P L FL P A + + + T+T N+ Sbjct: 155 EFTSRRAWSLHRFLKRLTLHPVLRRAPLLAIFLESPDWNAHMRLHSTR--TSTGNS---- 208 Query: 186 VPAKAGRDLFGMFKDLKQTVVNGLVATKPPPVEEETDTEFLSHKSRLEDXXXXXXXXXXX 365 +G +F F D T VN P D F+ K + + Sbjct: 209 --DGSGTGIFDNFTD---TFVNAFTKVHKP------DRRFIEVKEKADKLDEDLNHVEKI 257 Query: 366 AESLVKAQDDLRTTTXHLGMTLIKLXXXE 452 + + + DL L KL E Sbjct: 258 VARVARRESDLEADYNDLATQFRKLVPLE 286
>SNX1_RAT (Q99N27) Sorting nexin-1| Length = 522 Score = 37.7 bits (86), Expect = 0.014 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFL 104 +F+ +R AL+RYL+R+ HP + PD+R FL Sbjct: 233 EFLEKRRAALERYLQRIVNHPTMLQDPDVREFL 265
>SNX1_MOUSE (Q9WV80) Sorting nexin-1| Length = 522 Score = 37.7 bits (86), Expect = 0.014 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFL 104 +F+ +R AL+RYL+R+ HP + PD+R FL Sbjct: 233 EFLEKRRAALERYLQRIVNHPTMLQDPDVREFL 265
>SNX1_HUMAN (Q13596) Sorting nexin-1| Length = 522 Score = 37.7 bits (86), Expect = 0.014 Identities = 15/33 (45%), Positives = 23/33 (69%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFL 104 +F+ +R AL+RYL+R+ HP + PD+R FL Sbjct: 233 EFLEKRRAALERYLQRIVNHPTMLQDPDVREFL 265
>SNX4_KLULA (Q6CTQ0) Sorting nexin-4 (Autophagy-related protein 24)| Length = 400 Score = 37.4 bits (85), Expect = 0.018 Identities = 16/35 (45%), Positives = 23/35 (65%) Frame = +3 Query: 3 HDFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLT 107 H F +RC +LQ ++RRL +H ++ S L TFLT Sbjct: 94 HSFTQKRCRSLQTFMRRLLSHSELSKSRILETFLT 128
>SNX4_NEUCR (Q7SGV1) Sorting nexin-4 (Autophagy-related protein 24)| Length = 493 Score = 37.0 bits (84), Expect = 0.024 Identities = 16/36 (44%), Positives = 23/36 (63%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLTEP 113 DF ++R +LQR+L RLA HP++ + L FL P Sbjct: 151 DFTARRAYSLQRFLARLALHPILRKADILHAFLESP 186
>SNX4_EMENI (Q5B797) Sorting nexin-4 (Autophagy-related protein 24)| Length = 487 Score = 36.2 bits (82), Expect = 0.040 Identities = 35/149 (23%), Positives = 52/149 (34%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLTEPGAIAAFQGEAPQHWTTTVNAAIPQ 185 +F ++R +L R+L+RL HPV+ +P L FL P A H + A Sbjct: 153 EFTTRRAWSLHRFLKRLTLHPVLRRAPLLAIFLESPDWNA--------HMRLRGSRASTS 204 Query: 186 VPAKAGRDLFGMFKDLKQTVVNGLVATKPPPVEEETDTEFLSHKSRLEDXXXXXXXXXXX 365 G +F F D T VN P D F+ + + + Sbjct: 205 GSDGGGTGIFDNFTD---TFVNAFTKVHKP------DRRFIEVREKADKLDEDLTHVEKI 255 Query: 366 AESLVKAQDDLRTTTXHLGMTLIKLXXXE 452 + + + DL T L KL E Sbjct: 256 VARVARREADLETDYNDLATQFRKLVPLE 284
>SNX4_CANGA (Q6FPT9) Sorting nexin-4 (Autophagy-related protein 24)| Length = 430 Score = 35.4 bits (80), Expect = 0.069 Identities = 14/32 (43%), Positives = 22/32 (68%) Frame = +3 Query: 9 FVSQRCTALQRYLRRLAAHPVVAASPDLRTFL 104 F +RC +LQ +LRR++ HP+++ S L FL Sbjct: 124 FTQRRCHSLQNFLRRVSQHPILSTSKVLEIFL 155
>SNX4_SCHPO (O14243) Sorting nexin-4 (Autophagy-related protein 24)| Length = 401 Score = 35.0 bits (79), Expect = 0.090 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLTEP 113 +F+++R L RY+ R A HPV+ SP FL P Sbjct: 100 NFINRRAKLLNRYITRCALHPVLHQSPHFIAFLENP 135
>SNX7_MOUSE (Q9CY18) Sorting nexin-7| Length = 387 Score = 35.0 bits (79), Expect = 0.090 Identities = 15/48 (31%), Positives = 29/48 (60%), Gaps = 1/48 (2%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLT-EPGAIAAFQGEAP 146 DF+ R AL ++L R+A HP + + D + FLT + +++++ + P Sbjct: 112 DFIETRRKALHKFLNRIADHPTLTFNEDFKVFLTAQAEELSSYKKQGP 159
>SNX4_YEAST (P47057) Sorting nexin-4 (Autophagy-related protein 24) (Cytoplasm| to vacuole targeting protein 13) Length = 423 Score = 34.3 bits (77), Expect = 0.15 Identities = 14/32 (43%), Positives = 22/32 (68%) Frame = +3 Query: 9 FVSQRCTALQRYLRRLAAHPVVAASPDLRTFL 104 F +RC +LQ +LRR++ HP ++ S +TFL Sbjct: 119 FTQKRCHSLQNFLRRVSLHPDLSQSKVFKTFL 150
>SNX4_HUMAN (O95219) Sorting nexin-4| Length = 450 Score = 34.3 bits (77), Expect = 0.15 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLTEPGAIAAFQGEAPQHWTTTVN 170 DFV +R L+ +L R+A+HP++ FLT+ G +W TVN Sbjct: 149 DFVERRRIGLENFLLRIASHPILCRDKIFYLFLTQEG-----------NWKETVN 192
>SNX7_MACFA (Q4R5U9) Sorting nexin-7| Length = 387 Score = 34.3 bits (77), Expect = 0.15 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLT 107 DF+ R AL ++L R+A HP + + D + FLT Sbjct: 112 DFIETRRKALHKFLNRIADHPTLTFNEDFKIFLT 145
>SNX7_HUMAN (Q9UNH6) Sorting nexin-7| Length = 387 Score = 34.3 bits (77), Expect = 0.15 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLT 107 DF+ R AL ++L R+A HP + + D + FLT Sbjct: 112 DFIETRRKALHKFLNRIADHPTLTFNEDFKIFLT 145
>SNX4_PONPY (Q5R4C2) Sorting nexin-4| Length = 450 Score = 33.5 bits (75), Expect = 0.26 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLTEPGAIAAFQGEAPQHWTTTVN 170 DFV +R L+ +L R+A+HP++ FLT+ G +W TVN Sbjct: 149 DFVERRRIGLENFLLRIASHPLLCRDKIFYLFLTQEG-----------NWKETVN 192
>PUR7_COREF (Q8FML6) Phosphoribosylaminoimidazole-succinocarboxamide synthase| (EC 6.3.2.6) (SAICAR synthetase) Length = 304 Score = 31.6 bits (70), Expect = 0.99 Identities = 16/34 (47%), Positives = 20/34 (58%) Frame = -3 Query: 113 RLGKERAEVRAGGNDGVRGEAAEVALERGAALAD 12 RLG+ RA + + AAE+ALERG LAD Sbjct: 170 RLGEARANQLRDASIAIYSRAAEIALERGVILAD 203
>SNX14_HUMAN (Q9Y5W7) Sorting nexin-14| Length = 886 Score = 31.2 bits (69), Expect = 1.3 Identities = 22/96 (22%), Positives = 38/96 (39%) Frame = +3 Query: 3 HDFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLTEPGAIAAFQGEAPQHWTTTVNAAIP 182 ++F+ + Q YL++L HP ++ S L FL+ G F + + I Sbjct: 590 YEFLKSKREEFQEYLQKLLQHPELSNSQLLADFLSPNGGETQFLDKILP--DVNLGKIIK 647 Query: 183 QVPAKAGRDLFGMFKDLKQTVVNGLVATKPPPVEEE 290 VP K ++ + +N + KP P E Sbjct: 648 SVPGKLMKEKGQHLEPFIMNFINSCESPKPKPSRPE 683
>PAX1_MOUSE (P09084) Paired box protein Pax-1| Length = 361 Score = 31.2 bits (69), Expect = 1.3 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Frame = +3 Query: 90 LRTFLTEPGAIAAFQGEA----PQHWTTTVNAAIPQVPAKAGRDLFGMFKDLKQT 242 +RTF+ + GA+A +G A + W AA P PA G + + D+K T Sbjct: 204 IRTFMEQTGALAGSEGAAYSPKMEDWAGVNRAAFPTSPAVNGLEKPALEADIKYT 258
>SGK3_MOUSE (Q9ERE3) Serine/threonine-protein kinase Sgk3 (EC 2.7.11.1)| (Serum/glucocorticoid-regulated kinase 3) (Serum/glucocorticoid-regulated kinase-like) (Cytokine independent survival kinase) Length = 496 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLTEPGAIAAFQGEAPQH 152 DF+ QR L +++ L +P + PD+R FL Q ++P+H Sbjct: 85 DFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFL---------QMDSPRH 124
>SGK3_HUMAN (Q96BR1) Serine/threonine-protein kinase Sgk3 (EC 2.7.11.1)| (Serum/glucocorticoid-regulated kinase 3) (Serum/glucocorticoid-regulated kinase-like) Length = 496 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLTEPGAIAAFQGEAPQH 152 DF+ QR L +++ L +P + PD+R FL Q ++P+H Sbjct: 85 DFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFL---------QMDSPKH 124
>EXOC3_HUMAN (O60645) Exocyst complex component 3 (Exocyst complex component| Sec6) Length = 756 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/60 (30%), Positives = 30/60 (50%) Frame = +3 Query: 54 LAAHPVVAASPDLRTFLTEPGAIAAFQGEAPQHWTTTVNAAIPQVPAKAGRDLFGMFKDL 233 L +V+ PD+R GA+ A +G+A + T+ + Q PA+A +FKD+ Sbjct: 687 LEVSTLVSKYPDIRD--DHIGALLAVRGDASRDMKQTIMETLEQGPAQASPSYVPLFKDI 744
>PAX1_HUMAN (P15863) Paired box protein Pax-1 (HUP48)| Length = 440 Score = 30.4 bits (67), Expect = 2.2 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = +3 Query: 90 LRTFLTEPGAIAAFQGEA----PQHWTTTVNAAIPQVPAKAGRDLFGMFKDLKQT 242 +RTF+ + GA+A +G A + W A P PA G + + D+K T Sbjct: 204 IRTFMEQTGALAGSEGTAYSPKMEDWAGVNRTAFPATPAVNGLEKPALEADIKYT 258
>VPS5_SCHPO (Q9C0U7) Vacuolar protein sorting-associated protein vps5| Length = 576 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFL 104 +F+ QR AL+ LR+++AHPV+ + FL Sbjct: 279 EFIEQRRAALEVMLRKISAHPVLRDDYSFKLFL 311
>PUR4_XYLFT (Q87DN2) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)| (FGAM synthase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase) Length = 1322 Score = 30.4 bits (67), Expect = 2.2 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Frame = -3 Query: 305 EFCISLLLHRRWLSCDQPVHYSLFQILEHPKQVSPSFRRD--LRNRGVHRGSPVLR 144 E C + + W D+ YSLFQ+++H Q +P + N V G P R Sbjct: 207 EHCRHKIFNATWTIDDKEQPYSLFQMIKHTHQHTPQYTLSAYADNAAVIEGHPTTR 262
>SNX18_MOUSE (Q91ZR2) Sorting nexin-18 (Sorting nexin-associated Golgi protein| 1) Length = 614 Score = 30.0 bits (66), Expect = 2.9 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLTEPGA 119 DF+S+R L ++ +A+HPV+A + FLT P + Sbjct: 337 DFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCPSS 374
>SNX18_HUMAN (Q96RF0) Sorting nexin-18 (Sorting nexin associated Golgi protein| 1) Length = 628 Score = 30.0 bits (66), Expect = 2.9 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLTEPGA 119 DF+S+R L ++ +A+HPV+A + FLT P + Sbjct: 347 DFISKRRKGLIWWMNHMASHPVLAQCDVFQHFLTCPSS 384
>SNX4_CRYNE (Q5KJJ8) Sorting nexin-4 (Autophagy-related protein 24)| Length = 493 Score = 29.6 bits (65), Expect = 3.8 Identities = 26/108 (24%), Positives = 39/108 (36%) Frame = +3 Query: 6 DFVSQRCTALQRYLRRLAAHPVVAASPDLRTFLTEPGAIAAFQGEAPQHWTTTVNAAIPQ 185 +FV +R LQR+ R+A HPV+ S + FL W+ + I Sbjct: 172 EFVERRRLDLQRFADRIARHPVLQRSQLVNDFLQS------------TEWSVAKHHHISH 219 Query: 186 VPAKAGRDLFGMFKDLKQTVVNGLVATKPPPVEEETDTEFLSHKSRLE 329 P ++ L D T +N + P D F+ LE Sbjct: 220 PPPESHASLIDSLSD---TFINAFSRVRKP------DARFVEMTEELE 258
>LEU1_MYCBO (Q7TVV6) 2-isopropylmalate synthase (EC 2.3.3.13)| (Alpha-isopropylmalate synthase) (Alpha-IPM synthetase) Length = 701 Score = 29.3 bits (64), Expect = 4.9 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 6/58 (10%) Frame = +3 Query: 51 RLAAHPVVAASP----DLRTFLTEPGAIA--AFQGEAPQHWTTTVNAAIPQVPAKAGR 206 R A+ PV ASP + ++P IA A GEA +H + V A P P +AGR Sbjct: 607 RHASDPVTIASPAQPGEAGRHASDPVTIASPAQPGEAGRHASDPVTIASPAQPGEAGR 664
>PUR4_XYLFA (Q9PDF6) Phosphoribosylformylglycinamidine synthase (EC 6.3.5.3)| (FGAM synthase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase) Length = 1322 Score = 29.3 bits (64), Expect = 4.9 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Frame = -3 Query: 305 EFCISLLLHRRWLSCDQPVHYSLFQILEHPKQVSPSFRRD--LRNRGVHRGSPVLR 144 E C + + W D+ +SLFQ+++H Q +P + N V G P R Sbjct: 207 EHCRHKIFNATWTINDKEQQHSLFQMIKHTHQHTPQYTLSAYADNAAVIEGHPTAR 262
>MEGF8_MOUSE (P60882) Multiple epidermal growth factor-like domains 8 (EGF-like| domain-containing protein 4) (Multiple EGF-like domain protein 4) Length = 2330 Score = 29.3 bits (64), Expect = 4.9 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +2 Query: 128 LSGRGAA-ALDYHGERRDSAGPGESWERLVWDVQG 229 L GRG A++ G+ SAGPG S L+WD G Sbjct: 335 LPGRGNKYAVEIRGQLNGSAGPGHSELTLLWDRTG 369
>SNX41_SCHPO (O60107) Sorting nexin-41| Length = 586 Score = 29.3 bits (64), Expect = 4.9 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 12 VSQRCTALQRYLRRLAAHPVVAASPDLRTFLT 107 + +R LQ +LRR+A HP++ S R FL+ Sbjct: 149 LEERKRLLQLFLRRVAQHPILGLSEVFRKFLS 180
>ORK1_DROME (Q94526) Open rectifier potassium channel protein 1 (Two pore| domain potassium channel Ork1) Length = 1001 Score = 28.5 bits (62), Expect = 8.4 Identities = 12/21 (57%), Positives = 13/21 (61%) Frame = +3 Query: 228 DLKQTVVNGLVATKPPPVEEE 290 DL VVN L KPPP E+E Sbjct: 397 DLLAKVVNALATVKPPPAEQE 417 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,022,733 Number of Sequences: 219361 Number of extensions: 1030161 Number of successful extensions: 3263 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3188 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3261 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
