ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal40k08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome... 155 2e-34
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
3ref|NM_190415.1| Oryza sativa (japonica cultivar-group), predic... 80 7e-12
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
5dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
6dbj|AK120476.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
7dbj|AK073922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 7e-12
8gb|AC025445.5| Homo sapiens chromosome 5 clone CTD-2049O17, comp... 42 1.6
9emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 42 1.6
10gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 geno... 40 6.2
11ref|XM_590327.2| PREDICTED: Bos taurus hypothetical LOC512753 (L... 40 6.2
12gb|AC156605.13| Mus musculus chromosome 7, clone RP23-305G5, com... 40 6.2
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.2
14emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 6.2
15emb|CR388071.10| Zebrafish DNA sequence from clone DKEY-25M22 in... 40 6.2
16emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete ... 40 6.2
17emb|AL731673.8| Mouse DNA sequence from clone RP23-452E21 on chr... 40 6.2
18gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 6.2
19dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
20dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
21gb|AF323753.1|AF323753 Streptomyces nogalater nogalamycin biosyn... 40 6.2
22dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
23dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
24ref|NM_210602.1| Eremothecium gossypii AER393Cp (AER393C), mRNA 40 6.2
25emb|CR932040.2| Medicago truncatula chromosome 5 clone mth2-55h1... 40 6.2
26emb|Z50795.1|CER166 Caenorhabditis elegans Cosmid R166, complete... 40 6.2
27emb|AL805982.10| Mouse DNA sequence from clone RP23-119K17 on ch... 40 6.2
28emb|CR354605.8| Zebrafish DNA sequence from clone DKEY-5I9 in li... 40 6.2 
>gb|AC135924.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0486C01,
             complete sequence
          Length = 146432

 Score =  155 bits (78), Expect = 2e-34
 Identities = 153/178 (85%)
 Strand = Plus / Plus

                                                                         
Query: 189   ccggcgaaagctgggagagacttgtttgggatgttcaaggatttgaaacagactgtagtg 248
             ||||| ||||||||||||||||||||||||||||| |||| | |||||||||| || |||
Sbjct: 75313 ccggcaaaagctgggagagacttgtttgggatgtttaagggtctgaaacagacggtggtg 75372

                                                                         
Query: 249   aacgggttggtcgcaactaagccaccgcctgtggaggaggagactgatacagaattcctg 308
             |||||| |||| ||||| ||||| || || ||||||||||||||||| || |||||||| 
Sbjct: 75373 aacgggatggttgcaacaaagcccccaccggtggaggaggagactgacactgaattccta 75432

                                                                       
Query: 309   tcgcacaagtccaggctcgaggatttgcagcagcagctcaccacgacatctcagcagg 366
              | |||||| | ||| |  ||||||| ||||||||||||||||| |||||||| ||||
Sbjct: 75433 gcacacaaggctaggtttcaggatttacagcagcagctcaccacaacatctcaacagg 75490



 Score =  151 bits (76), Expect = 2e-33
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                         
Query: 1     gccacgacttcgtcagccagcgctgcaccgcgctccagcgctacctccgccgcctcgccg 60
             ||||||||||||| | |||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 75125 gccacgacttcgtgaaccagcggtgcagcgcgctccagcgctacctccgccgcctcgccg 75184

                                                                         
Query: 61    cgcaccccgtcgttgccgccagccctgacctccgcacgttccttaccgagccgggtgcca 120
             ||||||||||||| | |  |||||| || |||||||||||||| |||||||| || ||||
Sbjct: 75185 cgcaccccgtcgtcggccacagccccgatctccgcacgttcctcaccgagcctggcgcca 75244

                                 
Query: 121   tcgccgcctttcagggcgag 140
             || | |||||| ||||||||
Sbjct: 75245 tccctgcctttgagggcgag 75264



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                         
Query: 364   aggcggaatcacttgttaaagctcaggatgatcttcgaacaactacagntcatttgggaa 423
             |||||||| || | |||||||||| |||||||||| |||||||||||| |||||||||||
Sbjct: 76430 aggcggaagcattagttaaagctcgggatgatcttagaacaactacagctcatttgggaa 76489

                          
Query: 424   tgacattgattaa 436
             ||||||| |||||
Sbjct: 76490 tgacattaattaa 76502
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  155 bits (78), Expect = 2e-34
 Identities = 153/178 (85%)
 Strand = Plus / Plus

                                                                            
Query: 189      ccggcgaaagctgggagagacttgtttgggatgttcaaggatttgaaacagactgtagtg 248
                ||||| ||||||||||||||||||||||||||||| |||| | |||||||||| || |||
Sbjct: 23143538 ccggcaaaagctgggagagacttgtttgggatgtttaagggtctgaaacagacggtggtg 23143597

                                                                            
Query: 249      aacgggttggtcgcaactaagccaccgcctgtggaggaggagactgatacagaattcctg 308
                |||||| |||| ||||| ||||| || || ||||||||||||||||| || |||||||| 
Sbjct: 23143598 aacgggatggttgcaacaaagcccccaccggtggaggaggagactgacactgaattccta 23143657

                                                                          
Query: 309      tcgcacaagtccaggctcgaggatttgcagcagcagctcaccacgacatctcagcagg 366
                 | |||||| | ||| |  ||||||| ||||||||||||||||| |||||||| ||||
Sbjct: 23143658 gcacacaaggctaggtttcaggatttacagcagcagctcaccacaacatctcaacagg 23143715



 Score =  151 bits (76), Expect = 2e-33
 Identities = 124/140 (88%)
 Strand = Plus / Plus

                                                                            
Query: 1        gccacgacttcgtcagccagcgctgcaccgcgctccagcgctacctccgccgcctcgccg 60
                ||||||||||||| | |||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 23143350 gccacgacttcgtgaaccagcggtgcagcgcgctccagcgctacctccgccgcctcgccg 23143409

                                                                            
Query: 61       cgcaccccgtcgttgccgccagccctgacctccgcacgttccttaccgagccgggtgcca 120
                ||||||||||||| | |  |||||| || |||||||||||||| |||||||| || ||||
Sbjct: 23143410 cgcaccccgtcgtcggccacagccccgatctccgcacgttcctcaccgagcctggcgcca 23143469

                                    
Query: 121      tcgccgcctttcagggcgag 140
                || | |||||| ||||||||
Sbjct: 23143470 tccctgcctttgagggcgag 23143489



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                            
Query: 364      aggcggaatcacttgttaaagctcaggatgatcttcgaacaactacagntcatttgggaa 423
                |||||||| || | |||||||||| |||||||||| |||||||||||| |||||||||||
Sbjct: 23144655 aggcggaagcattagttaaagctcgggatgatcttagaacaactacagctcatttgggaa 23144714

                             
Query: 424      tgacattgattaa 436
                ||||||| |||||
Sbjct: 23144715 tgacattaattaa 23144727
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>ref|NM_190415.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1734

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                               
Query: 17  ccagcgctgcaccgcgctccagcgctacctccgccgcctcgccgcgcacccc 68
           |||||||||| |||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 729 ccagcgctgcgccgcgctccagcgctacctcggccgccttgccgcgcacccc 780



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 88/108 (81%)
 Strand = Plus / Plus

                                                                        
Query: 337  agcagcagctcaccacgacatctcagcaggcggaatcacttgttaaagctcaggatgatc 396
            ||||||| ||||| ||| ||||||||||||  ||  | ||| |||||||| | |||||||
Sbjct: 1067 agcagcatctcacgacggcatctcagcaggtagaggctcttcttaaagcttatgatgatc 1126

                                                            
Query: 397  ttcgaacaactacagntcatttgggaatgacattgattaaactgncaa 444
            ||  | ||||||||| |||  ||||||||||||| ||||| ||| |||
Sbjct: 1127 ttaaagcaactacaggtcaactgggaatgacattcattaagctggcaa 1174
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                    
Query: 17       ccagcgctgcaccgcgctccagcgctacctccgccgcctcgccgcgcacccc 68
                |||||||||| |||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 35392779 ccagcgctgcgccgcgctccagcgctacctcggccgccttgccgcgcacccc 35392728



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                            
Query: 379      ttaaagctcaggatgatcttcgaacaactacagntcatttgggaatgacattgattaaac 438
                |||||||| | |||||||||  | ||||||||| |||  ||||||||||||| ||||| |
Sbjct: 35392153 ttaaagcttatgatgatcttaaagcaactacaggtcaactgggaatgacattcattaagc 35392094

                      
Query: 439      tgncaa 444
                || |||
Sbjct: 35392093 tggcaa 35392088
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>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1088C09
          Length = 154084

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Minus

                                                                 
Query: 17    ccagcgctgcaccgcgctccagcgctacctccgccgcctcgccgcgcacccc 68
             |||||||||| |||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 16728 ccagcgctgcgccgcgctccagcgctacctcggccgccttgccgcgcacccc 16677



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 379   ttaaagctcaggatgatcttcgaacaactacagntcatttgggaatgacattgattaaac 438
             |||||||| | |||||||||  | ||||||||| |||  ||||||||||||| ||||| |
Sbjct: 16102 ttaaagcttatgatgatcttaaagcaactacaggtcaactgggaatgacattcattaagc 16043

                   
Query: 439   tgncaa 444
             || |||
Sbjct: 16042 tggcaa 16037
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>dbj|AK120476.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111G20, full
           insert sequence
          Length = 2018

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                               
Query: 17  ccagcgctgcaccgcgctccagcgctacctccgccgcctcgccgcgcacccc 68
           |||||||||| |||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 621 ccagcgctgcgccgcgctccagcgctacctcggccgccttgccgcgcacccc 672



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 88/108 (81%)
 Strand = Plus / Plus

                                                                        
Query: 337  agcagcagctcaccacgacatctcagcaggcggaatcacttgttaaagctcaggatgatc 396
            ||||||| ||||| ||| ||||||||||||  ||  | ||| |||||||| | |||||||
Sbjct: 959  agcagcatctcacgacggcatctcagcaggtagaggctcttcttaaagcttatgatgatc 1018

                                                            
Query: 397  ttcgaacaactacagntcatttgggaatgacattgattaaactgncaa 444
            ||  | ||||||||| |||  ||||||||||||| ||||| ||| |||
Sbjct: 1019 ttaaagcaactacaggtcaactgggaatgacattcattaagctggcaa 1066
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>dbj|AK073922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071C19, full
           insert sequence
          Length = 2011

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                               
Query: 17  ccagcgctgcaccgcgctccagcgctacctccgccgcctcgccgcgcacccc 68
           |||||||||| |||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 617 ccagcgctgcgccgcgctccagcgctacctcggccgccttgccgcgcacccc 668



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 88/108 (81%)
 Strand = Plus / Plus

                                                                        
Query: 337  agcagcagctcaccacgacatctcagcaggcggaatcacttgttaaagctcaggatgatc 396
            ||||||| ||||| ||| ||||||||||||  ||  | ||| |||||||| | |||||||
Sbjct: 955  agcagcatctcacgacggcatctcagcaggtagaggctcttcttaaagcttatgatgatc 1014

                                                            
Query: 397  ttcgaacaactacagntcatttgggaatgacattgattaaactgncaa 444
            ||  | ||||||||| |||  ||||||||||||| ||||| ||| |||
Sbjct: 1015 ttaaagcaactacaggtcaactgggaatgacattcattaagctggcaa 1062
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>gb|AC025445.5| Homo sapiens chromosome 5 clone CTD-2049O17, complete sequence
          Length = 184635

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 222   ttcaaggatttgaaacagact 242
             |||||||||||||||||||||
Sbjct: 80495 ttcaaggatttgaaacagact 80515
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 14      cagccagcgctgcaccgcgct 34
               |||||||||||||||||||||
Sbjct: 2560605 cagccagcgctgcaccgcgct 2560585
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>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete
             sequence
          Length = 163712

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    ccgccgcctcgccgcgcacc 66
             ||||||||||||||||||||
Sbjct: 48778 ccgccgcctcgccgcgcacc 48797
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>ref|XM_590327.2| PREDICTED: Bos taurus hypothetical LOC512753 (LOC512753), mRNA
          Length = 1144

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 268 agccaccgcctgtggaggaggaga 291
           |||||| |||||||||||||||||
Sbjct: 329 agccacagcctgtggaggaggaga 352
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>gb|AC156605.13| Mus musculus chromosome 7, clone RP23-305G5, complete sequence
          Length = 234816

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   cctgtggaggaggagactga 295
             ||||||||||||||||||||
Sbjct: 92844 cctgtggaggaggagactga 92825
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 47       ccgccgcctcgccgcgcacc 66
                ||||||||||||||||||||
Sbjct: 29722599 ccgccgcctcgccgcgcacc 29722580
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 46      tccgccgcctcgccgcgcac 65
               ||||||||||||||||||||
Sbjct: 2437655 tccgccgcctcgccgcgcac 2437636
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>emb|CR388071.10| Zebrafish DNA sequence from clone DKEY-25M22 in linkage group 14,
              complete sequence
          Length = 189098

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    gcagcagcagctcaccacga 354
              ||||||||||||||||||||
Sbjct: 103873 gcagcagcagctcaccacga 103892
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>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29
          Length = 277000

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 47     ccgccgcctcgccgcgcacc 66
              ||||||||||||||||||||
Sbjct: 125959 ccgccgcctcgccgcgcacc 125940
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>emb|AL731673.8| Mouse DNA sequence from clone RP23-452E21 on chromosome 11, complete
             sequence
          Length = 134108

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   agctgggagagacttgtttg 216
             ||||||||||||||||||||
Sbjct: 48238 agctgggagagacttgtttg 48257
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>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete
               sequence
          Length = 1519138

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 340     agcagctcaccacgacatct 359
               ||||||||||||||||||||
Sbjct: 1385472 agcagctcaccacgacatct 1385453
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 44       cctccgccgcctcgccgcgc 63
                ||||||||||||||||||||
Sbjct: 28602468 cctccgccgcctcgccgcgc 28602487
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 47       ccgccgcctcgccgcgcacc 66
                ||||||||||||||||||||
Sbjct: 29814021 ccgccgcctcgccgcgcacc 29814002
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>gb|AF323753.1|AF323753 Streptomyces nogalater nogalamycin biosynthetic gene cluster,
            complete sequence
          Length = 12637

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 46   tccgccgcctcgccgcgcac 65
            ||||||||||||||||||||
Sbjct: 6718 tccgccgcctcgccgcgcac 6699
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>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0550B04
          Length = 150131

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    cctccgccgcctcgccgcgc 63
             ||||||||||||||||||||
Sbjct: 93946 cctccgccgcctcgccgcgc 93965
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>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0622F03
          Length = 170064

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   cctccgccgcctcgccgcgc 63
            ||||||||||||||||||||
Sbjct: 3034 cctccgccgcctcgccgcgc 3053
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>ref|NM_210602.1| Eremothecium gossypii AER393Cp (AER393C), mRNA
          Length = 11094

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 agcagctcaccacgacatct 359
           ||||||||||||||||||||
Sbjct: 647 agcagctcaccacgacatct 666
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>emb|CR932040.2| Medicago truncatula chromosome 5 clone mth2-55h1, COMPLETE SEQUENCE
          Length = 122965

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 362   gcaggcggaatcacttgttaaagc 385
             |||||| |||||||||||||||||
Sbjct: 43228 gcaggctgaatcacttgttaaagc 43205
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>emb|Z50795.1|CER166 Caenorhabditis elegans Cosmid R166, complete sequence
          Length = 32012

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   gagagacttgtttgggatgt 222
             ||||||||||||||||||||
Sbjct: 25282 gagagacttgtttgggatgt 25301
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>emb|AL805982.10| Mouse DNA sequence from clone RP23-119K17 on chromosome X, complete
              sequence
          Length = 166357

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    ggatgttcaaggatttgaaa 236
              ||||||||||||||||||||
Sbjct: 134890 ggatgttcaaggatttgaaa 134909
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>emb|CR354605.8| Zebrafish DNA sequence from clone DKEY-5I9 in linkage group 14,
             complete sequence
          Length = 196530

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   gcagcagcagctcaccacga 354
             ||||||||||||||||||||
Sbjct: 22872 gcagcagcagctcaccacga 22891


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,454,338
Number of Sequences: 3902068
Number of extensions: 3454338
Number of successful extensions: 64760
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64405
Number of HSP's gapped (non-prelim): 350
length of query: 457
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 435
effective length of database: 17,147,199,772
effective search space: 7459031900820
effective search space used: 7459031900820
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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