ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal40j06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067997.1| Oryza sativa (japonica cultivar-group) cDNA clon... 387 e-104
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 305 6e-80
3dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic D... 305 6e-80
4ref|NM_135964.2| Drosophila melanogaster CG17912-RA (CG17912), mRNA 117 3e-23
5gb|AY051534.1| Drosophila melanogaster GH18623 full length cDNA 117 3e-23
6gb|AC093097.1| Drosophila melanogaster, chromosome 2L, region 36... 117 3e-23
7gb|AC005119.9|AC005119 Drosophila melanogaster, chromosome 2L, r... 117 3e-23
8gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61... 117 3e-23
9gb|BT013843.1| Lycopersicon esculentum clone 132800F, mRNA sequence 109 8e-21
10gb|BT014250.1| Lycopersicon esculentum clone 133452R, mRNA sequence 103 5e-19
11gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete se... 100 7e-18
12ref|XM_965174.1| PREDICTED: Tribolium castaneum similar to CG179... 58 3e-05
13ref|XM_319302.1| Anopheles gambiae str. PEST ENSANGP00000025039 ... 52 0.002
14gb|BC044099.1| Xenopus laevis zinc finger protein 207, mRNA (cDN... 50 0.006
15ref|XM_954914.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.096
16ref|XM_325999.1| Neurospora crassa OR74A hypothetical protein (N... 46 0.096
17gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 44 0.38
18gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 44 0.38
19emb|CR711729.2|CNS0GC4D Tetraodon nigroviridis full-length cDNA 44 0.38
20emb|CR716563.2|CNS0GFUK Tetraodon nigroviridis full-length cDNA 44 0.38
21emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.38
22gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g... 44 0.38
23gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 44 0.38
24dbj|AB210788.1| Ciona intestinalis mRNA for zinc finger protein,... 44 0.38
25dbj|AB210787.1| Ciona intestinalis mRNA for zinc finger protein,... 44 0.38
26dbj|AB210786.1| Ciona intestinalis mRNA for zinc finger protein,... 44 0.38
27dbj|AB210785.1| Ciona intestinalis mRNA for zinc finger protein,... 44 0.38
28ref|XM_572109.1| Cryptococcus neoformans var. neoformans JEC21 c... 44 0.38
29dbj|AK116288.1| Ciona intestinalis cDNA, clone:citb030a20, full ... 44 0.38
30gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.5
31emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 42 1.5
32gb|BC065456.1| Danio rerio zinc finger protein 207, a, mRNA (cDN... 40 5.9
33gb|AC135228.5| Oryza sativa chromosome 3 BAC OSJNBb0122C16 genom... 40 5.9
34gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
35ref|XM_452447.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C05566g ... 40 5.9
36ref|NM_213197.1| Danio rerio zinc finger protein 207, a (znf207a... 40 5.9
37gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.9
38gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.9
39ref|XM_781262.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.9
40ref|XM_791232.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.9
41gb|CP000088.1| Thermobifida fusca YX, complete genome 40 5.9
42emb|X15239.1|ZMPEPC1G Maize PEPC1 gene for phosphoenolpyruvate c... 40 5.9
43emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 5.9
44emb|AJ536629.1|ZMA536629 Zea mays mRNA for phosphoenolpyruvate c... 40 5.9
45emb|BX927111.8| Zebrafish DNA sequence from clone DKEY-54K13 in ... 40 5.9
46ref|XM_684418.1| PREDICTED: Danio rerio similar to zinc finger p... 40 5.9
47emb|X15238.1|ZMPEPC1 Maize mRNA for phosphoenolpyruvate carboxyl... 40 5.9
48emb|X03613.1|ZMPEPCR Maize mRNA for phosphoenolpyruvate carboxyl... 40 5.9
49emb|X15642.1|ZMPEP Z.mays gene for phosphoenolpyruvate carboxyla... 40 5.9
50dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
51dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
52dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
53dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
54emb|BX649502.4| Zebrafish DNA sequence from clone DKEY-204F11 in... 40 5.9
55gb|AY103747.1| Zea mays PCO070206 mRNA sequence 40 5.9
56gb|L36679.1|AMLUNA Amycolatopsis methanolica plasmid pMEA300 stf... 40 5.9
57emb|AL928593.4| Mouse DNA sequence from clone RP23-100E9 on chro... 40 5.9
58dbj|AB073084.1| Hordeum vulgare HvProT mRNA for proline transpor... 40 5.9 
>dbj|AK067997.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013127D16, full
           insert sequence
          Length = 2977

 Score =  387 bits (195), Expect = e-104
 Identities = 279/307 (90%)
 Strand = Plus / Plus

                                                                       
Query: 127 tggagaaggtcttctgctactactgcgaccgggagttcgacgacgagaagatcctggtgc 186
           |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 206 tggagaaggtgttctgctactactgcgaccgcgagttcgacgacgagaagatcctcgtgc 265

                                                                       
Query: 187 agcaccagaaggccaagcacttcaagtgccacgtctgccacaagaagctctccaccgccg 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 agcaccagaaggccaagcacttcaagtgccacgtctgccacaagaagctctccaccgccg 325

                                                                       
Query: 247 gcggcatggccatccacgtcctccaggtccacaaggagtccgtcactaaggttccgaatg 306
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 326 gcggcatggccatccacgtcctccaggtccacaaggagtccgtcaccaaggttcccaatg 385

                                                                       
Query: 307 ccaagcccgagagggactccaccgagatcgagatcttcggcatgcaagggatcccctcgg 366
           | ||||| |||||||| || || ||||| |||||||| || ||||||||||| ||  | |
Sbjct: 386 caaagcctgagagggaatcaacagagattgagatctttgggatgcaagggattcctccag 445

                                                                       
Query: 367 acgtgctcgccgcccactacggggaagaggaagaaccttcaccgaaggtgcccaaagtag 426
           | ||  | ||||||||||| || ||||||||||| |||||| |||||||  ||||||| |
Sbjct: 446 atgtattggccgcccactatggagaagaggaagacccttcatcgaaggtagccaaagtgg 505

                  
Query: 427 aagtgcc 433
           |||||||
Sbjct: 506 aagtgcc 512
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  305 bits (154), Expect = 6e-80
 Identities = 163/166 (98%)
 Strand = Plus / Minus

                                                                            
Query: 127      tggagaaggtcttctgctactactgcgaccgggagttcgacgacgagaagatcctggtgc 186
                |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 21990131 tggagaaggtgttctgctactactgcgaccgcgagttcgacgacgagaagatcctcgtgc 21990072

                                                                            
Query: 187      agcaccagaaggccaagcacttcaagtgccacgtctgccacaagaagctctccaccgccg 246
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21990071 agcaccagaaggccaagcacttcaagtgccacgtctgccacaagaagctctccaccgccg 21990012

                                                              
Query: 247      gcggcatggccatccacgtcctccaggtccacaaggagtccgtcac 292
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21990011 gcggcatggccatccacgtcctccaggtccacaaggagtccgtcac 21989966



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                            
Query: 296      ggttccgaatgccaagcccgagagggactccaccgagatcgagatcttcggcatgcaagg 355
                |||||| ||||| ||||| |||||||| || || ||||| |||||||| || ||||||||
Sbjct: 21989342 ggttcccaatgcaaagcctgagagggaatcaacagagattgagatctttgggatgcaagg 21989283

                   
Query: 356      gat 358
                |||
Sbjct: 21989282 gat 21989280
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>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0635G10
          Length = 146728

 Score =  305 bits (154), Expect = 6e-80
 Identities = 163/166 (98%)
 Strand = Plus / Minus

                                                                         
Query: 127   tggagaaggtcttctgctactactgcgaccgggagttcgacgacgagaagatcctggtgc 186
             |||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 32195 tggagaaggtgttctgctactactgcgaccgcgagttcgacgacgagaagatcctcgtgc 32136

                                                                         
Query: 187   agcaccagaaggccaagcacttcaagtgccacgtctgccacaagaagctctccaccgccg 246
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32135 agcaccagaaggccaagcacttcaagtgccacgtctgccacaagaagctctccaccgccg 32076

                                                           
Query: 247   gcggcatggccatccacgtcctccaggtccacaaggagtccgtcac 292
             ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32075 gcggcatggccatccacgtcctccaggtccacaaggagtccgtcac 32030



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                         
Query: 296   ggttccgaatgccaagcccgagagggactccaccgagatcgagatcttcggcatgcaagg 355
             |||||| ||||| ||||| |||||||| || || ||||| |||||||| || ||||||||
Sbjct: 31406 ggttcccaatgcaaagcctgagagggaatcaacagagattgagatctttgggatgcaagg 31347

                
Query: 356   gat 358
             |||
Sbjct: 31346 gat 31344
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>ref|NM_135964.2| Drosophila melanogaster CG17912-RA (CG17912), mRNA
          Length = 1613

 Score =  117 bits (59), Expect = 3e-23
 Identities = 80/87 (91%)
 Strand = Plus / Plus

                                                                       
Query: 147 tactgcgaccgggagttcgacgacgagaagatcctggtgcagcaccagaaggccaagcac 206
           |||||| |||| |||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 169 tactgcaaccgtgagttcgatgacgaaaagatccttgtgcagcaccagaaggccaagcac 228

                                      
Query: 207 ttcaagtgccacgtctgccacaagaag 233
           ||||| |||||| ||||||||||||||
Sbjct: 229 ttcaaatgccacatctgccacaagaag 255
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>gb|AY051534.1| Drosophila melanogaster GH18623 full length cDNA
          Length = 1316

 Score =  117 bits (59), Expect = 3e-23
 Identities = 80/87 (91%)
 Strand = Plus / Plus

                                                                       
Query: 147 tactgcgaccgggagttcgacgacgagaagatcctggtgcagcaccagaaggccaagcac 206
           |||||| |||| |||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 169 tactgcaaccgtgagttcgatgacgaaaagatccttgtgcagcaccagaaggccaagcac 228

                                      
Query: 207 ttcaagtgccacgtctgccacaagaag 233
           ||||| |||||| ||||||||||||||
Sbjct: 229 ttcaaatgccacatctgccacaagaag 255
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>gb|AC093097.1| Drosophila melanogaster, chromosome 2L, region 36A-36B, BAC clone
              BACR26O03, complete sequence
          Length = 175413

 Score =  117 bits (59), Expect = 3e-23
 Identities = 80/87 (91%)
 Strand = Plus / Plus

                                                                          
Query: 147    tactgcgaccgggagttcgacgacgagaagatcctggtgcagcaccagaaggccaagcac 206
              |||||| |||| |||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 116851 tactgcaaccgtgagttcgatgacgaaaagatccttgtgcagcaccagaaggccaagcac 116910

                                         
Query: 207    ttcaagtgccacgtctgccacaagaag 233
              ||||| |||||| ||||||||||||||
Sbjct: 116911 ttcaaatgccacatctgccacaagaag 116937
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>gb|AC005119.9|AC005119 Drosophila melanogaster, chromosome 2L, region 36B1-36B2, P1 clone
             DS06436, complete sequence
          Length = 68379

 Score =  117 bits (59), Expect = 3e-23
 Identities = 80/87 (91%)
 Strand = Plus / Plus

                                                                         
Query: 147   tactgcgaccgggagttcgacgacgagaagatcctggtgcagcaccagaaggccaagcac 206
             |||||| |||| |||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 19288 tactgcaaccgtgagttcgatgacgaaaagatccttgtgcagcaccagaaggccaagcac 19347

                                        
Query: 207   ttcaagtgccacgtctgccacaagaag 233
             ||||| |||||| ||||||||||||||
Sbjct: 19348 ttcaaatgccacatctgccacaagaag 19374
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>gb|AE003652.2| Drosophila melanogaster chromosome 2L, section 61 of 83 of the complete
              sequence
          Length = 262525

 Score =  117 bits (59), Expect = 3e-23
 Identities = 80/87 (91%)
 Strand = Plus / Plus

                                                                          
Query: 147    tactgcgaccgggagttcgacgacgagaagatcctggtgcagcaccagaaggccaagcac 206
              |||||| |||| |||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 127885 tactgcaaccgtgagttcgatgacgaaaagatccttgtgcagcaccagaaggccaagcac 127944

                                         
Query: 207    ttcaagtgccacgtctgccacaagaag 233
              ||||| |||||| ||||||||||||||
Sbjct: 127945 ttcaaatgccacatctgccacaagaag 127971
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>gb|BT013843.1| Lycopersicon esculentum clone 132800F, mRNA sequence
          Length = 2184

 Score =  109 bits (55), Expect = 8e-21
 Identities = 145/175 (82%)
 Strand = Plus / Plus

                                                                       
Query: 141 tgctactactgcgaccgggagttcgacgacgagaagatcctggtgcagcaccagaaggcc 200
           ||||||||||| ||| |||||||||| || ||||||||  |||| ||||| || ||||| 
Sbjct: 178 tgctactactgtgacagggagttcgatgatgagaagattttggttcagcatcaaaaggct 237

                                                                       
Query: 201 aagcacttcaagtgccacgtctgccacaagaagctctccaccgccggcggcatggccatc 260
           || |||||||| ||||| || ||||| |||||||| || || || |||||||||||||| 
Sbjct: 238 aaacacttcaaatgccatgtttgccataagaagctttctactgctggcggcatggccatt 297

                                                                  
Query: 261 cacgtcctccaggtccacaaggagtccgtcactaaggttccgaatgccaagcccg 315
           ||||| |||||||| ||||| ||  ||||||   |||| ||||||||||| ||||
Sbjct: 298 cacgttctccaggttcacaaagaaaccgtcagccaggtaccgaatgccaaacccg 352
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>gb|BT014250.1| Lycopersicon esculentum clone 133452R, mRNA sequence
          Length = 1369

 Score =  103 bits (52), Expect = 5e-19
 Identities = 118/140 (84%)
 Strand = Plus / Plus

                                                                       
Query: 171 gagaagatcctggtgcagcaccagaaggccaagcacttcaagtgccacgtctgccacaag 230
           ||||||||  |||| ||||||||||| ||||| |||||||||||| |    ||||| | |
Sbjct: 164 gagaagatattggttcagcaccagaaagccaaacacttcaagtgcaatcattgccatagg 223

                                                                       
Query: 231 aagctctccaccgccggcggcatggccatccacgtcctccaggtccacaaggagtccgtc 290
           ||||||||||| ||  ||||||||||||| ||||| |||||||| ||||||||| |||||
Sbjct: 224 aagctctccactgctagcggcatggccattcacgttctccaggttcacaaggagaccgtc 283

                               
Query: 291 actaaggttccgaatgccaa 310
           || ||||| || ||||||||
Sbjct: 284 accaaggtaccaaatgccaa 303
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>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence
          Length = 107448

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 113/134 (84%)
 Strand = Plus / Plus

                                                                        
Query: 147  tactgcgaccgggagttcgacgacgagaagatcctggtgcagcaccagaaggccaagcac 206
            |||||||| || || ||||| |||||||||||| |||| ||||| ||||| |||||||||
Sbjct: 6598 tactgcgatcgtgaattcgatgacgagaagatcttggttcagcatcagaaagccaagcac 6657

                                                                        
Query: 207  ttcaagtgccacgtctgccacaagaagctctccaccgccggcggcatggccatccacgtc 266
            || ||||| ||||| || || |||||||| ||||| || || |||||| |||| ||||| 
Sbjct: 6658 tttaagtgtcacgtttgtcataagaagctttccactgctggtggcatgtccattcacgtt 6717

                          
Query: 267  ctccaggtccacaa 280
            || |||||||||||
Sbjct: 6718 cttcaggtccacaa 6731
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>ref|XM_965174.1| PREDICTED: Tribolium castaneum similar to CG17912-PA (LOC658817),
           mRNA
          Length = 1194

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Plus

                                                                       
Query: 147 tactgcgaccgggagttcgacgacgagaagatcctggtgcagcaccagaaggccaagcac 206
           |||||| |||| |||||||| ||||||||||||||  | |||||||| || ||||| || 
Sbjct: 43  tactgcaaccgcgagttcgaggacgagaagatcctcatccagcaccaaaaagccaaacat 102

                                        
Query: 207 ttcaagtgccacgtctgccacaagaagct 235
           ||||| |||||| | ||||| || |||||
Sbjct: 103 ttcaaatgccacatatgccataaaaagct 131
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>ref|XM_319302.1| Anopheles gambiae str. PEST ENSANGP00000025039
           (ENSANGG00000010117), partial mRNA
          Length = 1168

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 62/74 (83%)
 Strand = Plus / Plus

                                                                       
Query: 162 ttcgacgacgagaagatcctggtgcagcaccagaaggccaagcacttcaagtgccacgtc 221
           ||||| |||||||||||  ||||||| || |||||||| ||||| ||||| |||||| | 
Sbjct: 401 ttcgatgacgagaagattttggtgcaacatcagaaggcaaagcatttcaaatgccacatt 460

                         
Query: 222 tgccacaagaagct 235
           || || ||||||||
Sbjct: 461 tgtcataagaagct 474
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>gb|BC044099.1| Xenopus laevis zinc finger protein 207, mRNA (cDNA clone MGC:52782
           IMAGE:4684263), complete cds
          Length = 1969

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 171 gagaagatcctggtgcagcaccagaaggccaagcacttcaagtgccacgtctgccacaag 230
           ||||| |||||| | |||||||| ||||| || ||||| || |||||| |||| ||||||
Sbjct: 99  gagaaaatcctgattcagcaccaaaaggcaaaacactttaaatgccacatctgtcacaag 158

                
Query: 231 aagct 235
           |||||
Sbjct: 159 aagct 163
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>ref|XM_954914.1| Neurospora crassa OR74A hypothetical protein (NCU06145.1) partial
           mRNA
          Length = 1104

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 189 caccagaaggccaagcacttcaagtgc 215
           |||||||| ||||||||||||||||||
Sbjct: 106 caccagaaagccaagcacttcaagtgc 132
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>ref|XM_325999.1| Neurospora crassa OR74A hypothetical protein (NCU06145.1) partial
           mRNA
          Length = 1104

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 189 caccagaaggccaagcacttcaagtgc 215
           |||||||| ||||||||||||||||||
Sbjct: 106 caccagaaagccaagcacttcaagtgc 132
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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
               sequence
          Length = 1347793

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 172     agaagatcctggtgcagcacca 193
               ||||||||||||||||||||||
Sbjct: 1101848 agaagatcctggtgcagcacca 1101827
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 12     ccgcggcgtcgccgaacgaaac 33
              ||||||||||||||||||||||
Sbjct: 616350 ccgcggcgtcgccgaacgaaac 616329
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>emb|CR711729.2|CNS0GC4D Tetraodon nigroviridis full-length cDNA
          Length = 257

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 186 cagcaccagaaggccaagcacttcaagtgccacgtctgccacaagaagct 235
           |||||||||||||| ||||| ||||| |||||  | |||||||| |||||
Sbjct: 196 cagcaccagaaggcgaagcatttcaaatgccatatttgccacaaaaagct 245
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>emb|CR716563.2|CNS0GFUK Tetraodon nigroviridis full-length cDNA
          Length = 1695

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 186 cagcaccagaaggccaagcacttcaagtgccacgtctgccacaagaagct 235
           |||||||||||||| ||||| ||||| |||||  | |||||||| |||||
Sbjct: 182 cagcaccagaaggcgaagcatttcaaatgccatatttgccacaaaaagct 231
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 12      ccgcggcgtcgccgaacgaaac 33
               ||||||||||||||||||||||
Sbjct: 1936084 ccgcggcgtcgccgaacgaaac 1936063
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>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 394     aggaagaaccttcaccgaaggt 415
               ||||||||||||||||||||||
Sbjct: 6003984 aggaagaaccttcaccgaaggt 6004005
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 12     ccgcggcgtcgccgaacgaaac 33
              ||||||||||||||||||||||
Sbjct: 579229 ccgcggcgtcgccgaacgaaac 579250
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>dbj|AB210788.1| Ciona intestinalis mRNA for zinc finger protein, complete cds,
           clone: cima831d24
          Length = 2169

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 192 cagaaggccaagcacttcaagtgccacgtctgccacaagaag 233
           |||||||||||||| |||||||| || || ||||| ||||||
Sbjct: 124 cagaaggccaagcatttcaagtgtcatgtttgccataagaag 165
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>dbj|AB210787.1| Ciona intestinalis mRNA for zinc finger protein, complete cds,
           clone: ciad101j04
          Length = 2007

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 192 cagaaggccaagcacttcaagtgccacgtctgccacaagaag 233
           |||||||||||||| |||||||| || || ||||| ||||||
Sbjct: 127 cagaaggccaagcatttcaagtgtcatgtttgccataagaag 168
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>dbj|AB210786.1| Ciona intestinalis mRNA for zinc finger protein, complete cds,
           clone: ciht019m04
          Length = 1309

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 192 cagaaggccaagcacttcaagtgccacgtctgccacaagaag 233
           |||||||||||||| |||||||| || || ||||| ||||||
Sbjct: 158 cagaaggccaagcatttcaagtgtcatgtttgccataagaag 199
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>dbj|AB210785.1| Ciona intestinalis mRNA for zinc finger protein, complete cds,
           clone: citb030a20
          Length = 1214

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 192 cagaaggccaagcacttcaagtgccacgtctgccacaagaag 233
           |||||||||||||| |||||||| || || ||||| ||||||
Sbjct: 118 cagaaggccaagcatttcaagtgtcatgtttgccataagaag 159
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>ref|XM_572109.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7
          Length = 2248

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 172 agaagatcctggtgcagcacca 193
           ||||||||||||||||||||||
Sbjct: 291 agaagatcctggtgcagcacca 270
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>dbj|AK116288.1| Ciona intestinalis cDNA, clone:citb030a20, full insert sequence
          Length = 1214

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 192 cagaaggccaagcacttcaagtgccacgtctgccacaagaag 233
           |||||||||||||| |||||||| || || ||||| ||||||
Sbjct: 118 cagaaggccaagcatttcaagtgtcatgtttgccataagaag 159
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 233     gctctccaccgccggcggcatggccatcc 261
               ||||||||||||  |||||||||||||||
Sbjct: 4998779 gctctccaccgcgcgcggcatggccatcc 4998751
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 295     aggttccgaatgccaagcccgagag 319
               |||| ||||||||||||||||||||
Sbjct: 3529037 aggtaccgaatgccaagcccgagag 3529061
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>gb|BC065456.1| Danio rerio zinc finger protein 207, a, mRNA (cDNA clone MGC:77832
           IMAGE:7001771), complete cds
          Length = 1939

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 186 cagcaccagaaggccaagcacttcaagtgccacgtctgccacaagaag 233
           ||||| |||||||||||||| || ||||| ||| | || |||||||||
Sbjct: 133 cagcatcagaaggccaagcattttaagtgtcacatatgtcacaagaag 180
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>gb|AC135228.5| Oryza sativa chromosome 3 BAC OSJNBb0122C16 genomic sequence,
            complete sequence
          Length = 129440

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 28   cgaaaccctagcccccgcgc 47
            ||||||||||||||||||||
Sbjct: 6002 cgaaaccctagcccccgcgc 6021
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>gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0060G17, complete sequence
          Length = 174949

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 30    aaaccctagcccccgcgctcgtctcgcc 57
             ||||||||||||| |||| |||||||||
Sbjct: 29370 aaaccctagcccctgcgcccgtctcgcc 29397
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>ref|XM_452447.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C05566g predicted mRNA
          Length = 1434

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 400 aaccttcaccgaaggtgcccaaag 423
           ||||||||||||||||| ||||||
Sbjct: 910 aaccttcaccgaaggtgaccaaag 887
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>ref|NM_213197.1| Danio rerio zinc finger protein 207, a (znf207a), mRNA
          Length = 1939

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 186 cagcaccagaaggccaagcacttcaagtgccacgtctgccacaagaag 233
           ||||| |||||||||||||| || ||||| ||| | || |||||||||
Sbjct: 133 cagcatcagaaggccaagcattttaagtgtcacatatgtcacaagaag 180
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>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15,
              complete sequence
          Length = 162959

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 30     aaaccctagcccccgcgctcgtctcgcc 57
              ||||||||||||| |||| |||||||||
Sbjct: 124555 aaaccctagcccctgcgcccgtctcgcc 124582
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 28       cgaaaccctagcccccgcgc 47
                ||||||||||||||||||||
Sbjct: 29174141 cgaaaccctagcccccgcgc 29174160
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>ref|XM_781262.1| PREDICTED: Strongylocentrotus purpuratus similar to forebrain
            embryonic zinc-finger like (LOC581249), partial mRNA
          Length = 1483

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 207  ttcaagtgccacgtctgccacaag 230
            |||||||||||| |||||||||||
Sbjct: 1273 ttcaagtgccacatctgccacaag 1296
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>ref|XM_791232.1| PREDICTED: Strongylocentrotus purpuratus similar to forebrain
            embryonic zinc-finger like (LOC591680), mRNA
          Length = 1515

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 207  ttcaagtgccacgtctgccacaag 230
            |||||||||||| |||||||||||
Sbjct: 1273 ttcaagtgccacatctgccacaag 1296
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 373     tcgccgcccactacggggaa 392
               ||||||||||||||||||||
Sbjct: 3382884 tcgccgcccactacggggaa 3382903
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>emb|X15239.1|ZMPEPC1G Maize PEPC1 gene for phosphoenolpyruvate carboxylase (EC 4.1.1.31)
          Length = 6151

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 359  cccctcggacgtgctcgccg 378
            ||||||||||||||||||||
Sbjct: 4173 cccctcggacgtgctcgccg 4192
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>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1753957

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 400    aaccttcaccgaaggtgcccaaag 423
              ||||||||||||||||| ||||||
Sbjct: 498401 aaccttcaccgaaggtgaccaaag 498424
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>emb|AJ536629.1|ZMA536629 Zea mays mRNA for phosphoenolpyruvate carboxylase (ppc1 gene), clone
            pM500
          Length = 2913

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 359  cccctcggacgtgctcgccg 378
            ||||||||||||||||||||
Sbjct: 1617 cccctcggacgtgctcgccg 1636
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>emb|BX927111.8| Zebrafish DNA sequence from clone DKEY-54K13 in linkage group 3,
             complete sequence
          Length = 49407

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                             
Query: 186   cagcaccagaaggccaagcacttcaagtgccacgtctgccacaagaag 233
             ||||| |||||||||||||| || ||||| ||| | || |||||||||
Sbjct: 49184 cagcatcagaaggccaagcattttaagtgtcacatatgtcacaagaag 49137
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>ref|XM_684418.1| PREDICTED: Danio rerio similar to zinc finger protein 207
           (LOC573044), mRNA
          Length = 637

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 186 cagcaccagaaggccaagcacttcaagtgccacgtctgccacaagaag 233
           ||||| |||||||||||||| || ||||| ||| | || |||||||||
Sbjct: 155 cagcatcagaaggccaagcattttaagtgtcacatatgtcacaagaag 202
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>emb|X15238.1|ZMPEPC1 Maize mRNA for phosphoenolpyruvate carboxylase (EC 4.1.1.31)
          Length = 3265

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 359  cccctcggacgtgctcgccg 378
            ||||||||||||||||||||
Sbjct: 1697 cccctcggacgtgctcgccg 1716
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>emb|X03613.1|ZMPEPCR Maize mRNA for phosphoenolpyruvate carboxylase (PEPCase EC 4.1.1.31)
          Length = 3028

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 359  cccctcggacgtgctcgccg 378
            ||||||||||||||||||||
Sbjct: 1513 cccctcggacgtgctcgccg 1532
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>emb|X15642.1|ZMPEP Z.mays gene for phosphoenolpyruvate carboxylase (EC 4.1.1.31)
          Length = 6781

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 359  cccctcggacgtgctcgccg 378
            ||||||||||||||||||||
Sbjct: 4837 cccctcggacgtgctcgccg 4856
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 30       aaaccctagcccccgcgctcgtctcgcc 57
                |||||||||||||| ||| |||||||||
Sbjct: 16748645 aaaccctagccccctcgcccgtctcgcc 16748618
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 30      aaaccctagcccccgcgctcgtctcgcc 57
               ||||||||||||| |||| |||||||||
Sbjct: 7939780 aaaccctagcccctgcgcccgtctcgcc 7939807
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 28       cgaaaccctagcccccgcgc 47
                ||||||||||||||||||||
Sbjct: 29265563 cgaaaccctagcccccgcgc 29265582
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>dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0664F03
          Length = 184242

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 30     aaaccctagcccccgcgctcgtctcgcc 57
              |||||||||||||| ||| |||||||||
Sbjct: 100132 aaaccctagccccctcgcccgtctcgcc 100105
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>emb|BX649502.4| Zebrafish DNA sequence from clone DKEY-204F11 in linkage group 3,
            complete sequence
          Length = 247387

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 186  cagcaccagaaggccaagcacttcaagtgccacgtctgccacaagaag 233
            ||||| |||||||||||||| || ||||| ||| | || |||||||||
Sbjct: 1777 cagcatcagaaggccaagcattttaagtgtcacatatgtcacaagaag 1730
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>gb|AY103747.1| Zea mays PCO070206 mRNA sequence
          Length = 3289

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 359  cccctcggacgtgctcgccg 378
            ||||||||||||||||||||
Sbjct: 1697 cccctcggacgtgctcgccg 1716
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>gb|L36679.1|AMLUNA Amycolatopsis methanolica plasmid pMEA300 stf gene, complete cds
          Length = 13285

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 244  ccggcggcatggccatccacgtcctcca 271
            ||||||||||||||  ||||||||||||
Sbjct: 2051 ccggcggcatggccgcccacgtcctcca 2024
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>emb|AL928593.4| Mouse DNA sequence from clone RP23-100E9 on chromosome 2, complete
             sequence
          Length = 195840

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 177   atcctggtgcagcaccagaaggccaagc 204
             ||||||||||| | ||||||||||||||
Sbjct: 77416 atcctggtgcaactccagaaggccaagc 77389
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>dbj|AB073084.1| Hordeum vulgare HvProT mRNA for proline transporter, complete cds
          Length = 2161

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 ccgccggcggcatggccatc 260
           ||||||||||||||||||||
Sbjct: 208 ccgccggcggcatggccatc 189


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,688,009
Number of Sequences: 3902068
Number of extensions: 2688009
Number of successful extensions: 52907
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52303
Number of HSP's gapped (non-prelim): 603
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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