>ESCA_ARATH (Q9S7C9) Putative DNA-binding protein ESCAROLA|
          Length = 311

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
 Frame = +2

Query: 122 HIITVKPNEDVASKIMSFSQQGPRTTCIISANGALCTATLRQPAT---------SGGIVT 274
           H++ V P  D+   + +++++  R   ++  NG +   TLRQP T          GG+VT
Sbjct: 116 HVLEVSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGGGVSGGGGVVT 175

Query: 275 YEGHFDILSLSGSFLLAEDGDTRSRTGGLSVALAGSDGRVVGGCVAGMLMAATPVQVVVG 454
             G F+ILSL+G+ L           GGLS+ LAG  G+VVGG V   L+A+ PV ++  
Sbjct: 176 LHGRFEILSLTGTVL---PPPAPPGAGGLSIFLAGGQGQVVGGSVVAPLIASAPVILMAA 232

Query: 455 SF 460
           SF
Sbjct: 233 SF 234

>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 37.7 bits (86), Expect = 0.033
 Identities = 19/48 (39%), Positives = 22/48 (45%)
 Frame = -1

Query: 471  PSAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPS 328
            P+    P TT T    I+   T PPTT PS P   T  PP     +PS
Sbjct: 1653 PTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPS 1700



 Score = 37.4 bits (85), Expect = 0.043
 Identities = 22/71 (30%), Positives = 27/71 (38%)
 Frame = -1

Query: 471  PSAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRERI 292
            P+    P TT T         T PPTT PS P   T  PP     SP + +   P     
Sbjct: 1574 PTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTT 1633

Query: 291  SKWPSYVTMPP 259
            +  P+    PP
Sbjct: 1634 TLPPTTTPSPP 1644



 Score = 34.7 bits (78), Expect = 0.28
 Identities = 22/70 (31%), Positives = 27/70 (38%)
 Frame = -1

Query: 468  SAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRERIS 289
            S   LP TT T     +   T PPTT PS P   T  PP +   +P   +   P     +
Sbjct: 1552 STTTLPPTT-TPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPPPTTTPSPPTTTTT 1610

Query: 288  KWPSYVTMPP 259
              P   T  P
Sbjct: 1611 TPPPTTTPSP 1620



 Score = 34.3 bits (77), Expect = 0.36
 Identities = 21/70 (30%), Positives = 27/70 (38%)
 Frame = -1

Query: 468  SAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRERIS 289
            S   LP TT T     +   T PPTT PS P    + PP      P + +   P     +
Sbjct: 1513 STTTLPPTT-TPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTT 1571

Query: 288  KWPSYVTMPP 259
              P+    PP
Sbjct: 1572 PPPTTTPSPP 1581



 Score = 33.9 bits (76), Expect = 0.47
 Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
 Frame = -1

Query: 471  PSAMKLPTTTWTGVAAISIPATQ----PPTTRPSLPARATLKPPVLLRVSPSSASRKEPD 304
            PS   + TTT       S P T     PPTT PS P    + PP      P + +   P 
Sbjct: 1586 PSPPTITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPP 1645

Query: 303  RERISKWPSYVTMPP 259
                +  P+    PP
Sbjct: 1646 TTTTTPPPTTTPSPP 1660



 Score = 33.9 bits (76), Expect = 0.47
 Identities = 22/71 (30%), Positives = 28/71 (39%)
 Frame = -1

Query: 471  PSAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRERI 292
            P+    P TT T +   +   T PPTT PS P   T  PP     SP + +   P     
Sbjct: 1535 PTTTPSPPTT-TPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITT 1593

Query: 291  SKWPSYVTMPP 259
            +  P   T  P
Sbjct: 1594 TTPPPTTTPSP 1604



 Score = 33.9 bits (76), Expect = 0.47
 Identities = 22/70 (31%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
 Frame = -1

Query: 453  PTTT-----WTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRERIS 289
            PTTT      T +   +   T PPTT PS P   T  PP     SP + +   P     +
Sbjct: 1496 PTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTT 1555

Query: 288  KWPSYVTMPP 259
              P+    PP
Sbjct: 1556 LPPTTTPSPP 1565



 Score = 33.1 bits (74), Expect = 0.80
 Identities = 19/55 (34%), Positives = 24/55 (43%)
 Frame = -1

Query: 471  PSAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEP 307
            P+    P TT T +   +   T PPTT PS P   T  PP     SP + +   P
Sbjct: 1614 PTTTPSPPTT-TPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSP 1667



 Score = 33.1 bits (74), Expect = 0.80
 Identities = 20/65 (30%), Positives = 25/65 (38%)
 Frame = -1

Query: 453  PTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRERISKWPSY 274
            PTTT T         T PPTT PS P    + PP      P + +   P     +  P+ 
Sbjct: 1487 PTTTTT---------TPPPTTTPSPPMTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTT 1537

Query: 273  VTMPP 259
               PP
Sbjct: 1538 TPSPP 1542



 Score = 33.1 bits (74), Expect = 0.80
 Identities = 24/73 (32%), Positives = 27/73 (36%), Gaps = 2/73 (2%)
 Frame = -1

Query: 471  PSAMKLPTTTWTGVAAISIPAT--QPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRE 298
            PS     TTT       S P T   PPTT PS P   T  PP     SP   +   P   
Sbjct: 1454 PSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPMTTPITPPAS 1513

Query: 297  RISKWPSYVTMPP 259
              +  P+    PP
Sbjct: 1514 TTTLPPTTTPSPP 1526



 Score = 31.6 bits (70), Expect = 2.3
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = -1

Query: 468  SAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSP 331
            S   LP TT T     +   T PPTT PS P   T  PP+    +P
Sbjct: 1631 STTTLPPTT-TPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTP 1675



 Score = 31.6 bits (70), Expect = 2.3
 Identities = 20/65 (30%), Positives = 24/65 (36%)
 Frame = -1

Query: 453  PTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRERISKWPSY 274
            P  T T    I+   T  PTT PS P   T  PP     SP + +   P         + 
Sbjct: 1432 PPPTTTPSPPITTTTTPLPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTT 1491

Query: 273  VTMPP 259
             T PP
Sbjct: 1492 TTPPP 1496



 Score = 29.6 bits (65), Expect = 8.9
 Identities = 23/66 (34%), Positives = 24/66 (36%), Gaps = 1/66 (1%)
 Frame = -1

Query: 453  PTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRERISKWP-S 277
            PTTT           T PPTT PS P   T  PP     SP   +   P        P S
Sbjct: 1410 PTTT----------TTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPLPTTTPSPPIS 1459

Query: 276  YVTMPP 259
              T PP
Sbjct: 1460 TTTTPP 1465

>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)|
          Length = 426

 Score = 33.5 bits (75), Expect = 0.61
 Identities = 25/78 (32%), Positives = 31/78 (39%)
 Frame = -1

Query: 486 FGFLLPSAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEP 307
           F  LLP    LP     G      P  QP  + PS   +    PP   + SP   S K+P
Sbjct: 112 FAGLLPLIPNLPDVPPIGGGP---PVNQPKPSSPSPLVKPPPPPPSPCKPSPPDQSAKQP 168

Query: 306 DRERISKWPSYVTMPPEV 253
            +   +K PS    PP V
Sbjct: 169 PQPPPAKQPSPPPPPPPV 186



 Score = 32.7 bits (73), Expect = 1.0
 Identities = 31/82 (37%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
 Frame = -1

Query: 471 PSAMKLPTTTWTGVAAIS-IPATQPPTTRPSLPARATLKP----------PVLLRVSPSS 325
           PS  K P      V A S  PATQPPT +P  P RA   P          P ++  SPS 
Sbjct: 191 PSPAKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLLPPPPPVAYPPVMTPSPSP 250

Query: 324 ASRKEPDRERISKWPSYVTMPP 259
           A+  EP    I+ +PS    PP
Sbjct: 251 AA--EP--PIIAPFPSPPANPP 268

>GP110_MOUSE (Q8VEC3) G-protein coupled receptor 110 precursor|
          Length = 908

 Score = 33.5 bits (75), Expect = 0.61
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -2

Query: 95  LRHRAVSFCQIQGGVL-CACRQDSSWTPPSC 6
           +R +A ++C+ + G L CAC    +W PPSC
Sbjct: 85  IRVKATTYCRSRKGFLECACEDSYTWFPPSC 115

>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore|
           membrane protein of 121 kDa) (P145)
          Length = 1229

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
 Frame = -1

Query: 429 AAISIPATQPPTTRPS----LPARATLKPPVLLRVSPSSASRKEPDRERISKWPSYVTMP 262
           AA +     PPTT+PS    LPA AT  PP  L ++PS+     P  E + K  +  ++P
Sbjct: 534 AASNSVTETPPTTQPSFTFTLPAAATASPPTSL-LAPST----NPLLESLKKMQTPPSLP 588

Query: 261 --PEVAG*RSVAVHSAP 217
             PE AG  +    S P
Sbjct: 589 PCPESAGAATTEALSPP 605

>GFC1_HUMAN (P63117) HERV-F(c)1_Xq21.33 provirus ancestral Gag polyprotein (Gag|
           polyprotein) [Contains: Matrix protein; Capsid protein]
          Length = 469

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = -1

Query: 393 TRPSLPARATLKPPVLLRVSPSSASRKEPDRERISKWPSYVTMPP 259
           +RP L A+ +L   +L + SPS    KEPD   +S+ P  + +PP
Sbjct: 91  SRPDLCAKCSLGQVLLAKASPS---NKEPDSSPLSEPPEALALPP 132

>TSH1_HUMAN (Q6ZSZ6) Teashirt homolog 1 (Serologically defined colon cancer|
           antigen 3) (Antigen NY-CO-33)
          Length = 1077

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = -1

Query: 420 SIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRER 295
           SIP   PPTT   LPA +  K P     S +S  +KEP++E+
Sbjct: 467 SIPL--PPTTHTRLPASSIKKQPDSPAGSTTSEEKKEPEKEK 506

>PDC6I_XENLA (Q9W6C5) Programmed cell death 6-interacting protein (Signal|
           transduction protein Xp95)
          Length = 867

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 8/84 (9%)
 Frame = -1

Query: 474 LPSAMKLPTTTWTGVAAISIPATQP--------PTTRPSLPARATLKPPVLLRVSPSSAS 319
           +PS    P++  T +A  SIP   P        P  RP  PA  +  P   +  S + AS
Sbjct: 724 VPSYQSAPSSISTNIATSSIPTPAPRTVFSAKQPPPRPPPPAMPSASP---VPASAAQAS 780

Query: 318 RKEPDRERISKWPSYVTMPPEVAG 247
              P     S  P   T+P +  G
Sbjct: 781 NPAPTAAADSSQPPSNTIPSQAQG 804

>INO80_ASPFU (Q4WTV7) Putative DNA helicase ino80 (EC 3.6.1.-)|
          Length = 1708

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 24/62 (38%), Positives = 30/62 (48%)
 Frame = -1

Query: 474 LPSAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRER 295
           LP A+  P TT T       PA  PPT  P +PAR  L PP +    P ++  K  + E 
Sbjct: 208 LPEALPGPATTIT-------PA--PPTLAP-VPARRRLTPPPVTHALPPTSQLKVKEPEP 257

Query: 294 IS 289
           IS
Sbjct: 258 IS 259

>TSH1_MOUSE (Q5DTH5) Teashirt homolog 1 (Serologically defined colon cancer|
           antigen 3 homolog)
          Length = 1084

 Score = 31.6 bits (70), Expect = 2.3
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = -1

Query: 420 SIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRER 295
           SIP   PPTT   LPA +  K P     S +S  +KEP++E+
Sbjct: 467 SIPL--PPTTHTRLPASSIKKQPDSPAGSVASEEKKEPEKEK 506

>GP110_HUMAN (Q5T601) Probable G-protein coupled receptor 110 precursor|
           (G-protein coupled receptor PGR19) (G-protein coupled
           receptor KPG_012)
          Length = 911

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -2

Query: 95  LRHRAVSFCQIQGGVL-CACRQDSSWTPPSC 6
           +R +A + C    GVL C C    +W PPSC
Sbjct: 87  IRAKATTDCNSLNGVLQCTCEDSYTWFPPSC 117

>HXA3_MOUSE (P02831) Homeobox protein Hox-A3 (Hox-1.5) (MO-10)|
          Length = 443

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 16/45 (35%), Positives = 19/45 (42%)
 Frame = -1

Query: 414 PATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRERISKWP 280
           PA QPP   P  PA     PP    VSP  ++   P     +K P
Sbjct: 101 PAPQPPQPPPQPPAPTPAAPPPPSSVSPPQSANSNPTPASTAKSP 145

>PI5PA_RAT (Q9JMC1) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56) (Proline-rich inositol polyphosphate
           5-phosphatase)
          Length = 1001

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
 Frame = -1

Query: 471 PSAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRV-SPSSASRKEPDRER 295
           P  + L  ++    +    P    PT RP +P+  T+ PP+     SPS +  + P+R  
Sbjct: 302 PQTLPLDVSSGLPESGTRSPGLLSPTFRPGIPSNQTVPPPLPKPPRSPSRSPSRSPNRS- 360

Query: 294 ISKWPSYVTMPPEVAG*RSVAVHSAP 217
                  V   PEVA  R V   + P
Sbjct: 361 -----PCVPPAPEVALPRPVTQGAGP 381

>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein|
           9.2) (Ultrahigh sulfur keratin-associated protein 9.2)
          Length = 174

 Score = 26.2 bits (56), Expect(2) = 4.6
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 364 CCSGWKRWTCCRRLCC 411
           CCS   + TCCR  CC
Sbjct: 4   CCSPCCQPTCCRTTCC 19



 Score = 23.1 bits (48), Expect(2) = 4.6
 Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 1/21 (4%)
 Frame = +1

Query: 388 TCCRRLCCWNAYGCNAC-PGC 447
           TCCR  CC      + C P C
Sbjct: 60  TCCRTTCCQPTCVTSCCQPSC 80

>PRG4_MOUSE (Q9JM99) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte|
           stimulating factor) (Superficial zone proteoglycan)
           [Contains: Proteoglycan-4 C-terminal part]
          Length = 1054

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 18/56 (32%), Positives = 23/56 (41%)
 Frame = -1

Query: 471 PSAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPD 304
           P+  K P TT      + +P    PTT    P   T KP    R  P   + KEP+
Sbjct: 329 PTTTKKPVTTTKESKFLPLPQEPEPTTAKE-PPPTTKKPEPTTRKEPEPTTPKEPE 383

>JPH2_MOUSE (Q9ET78) Junctophilin-2 (Junctophilin type 2) (JP-2)|
          Length = 696

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -1

Query: 420 SIPATQPPTTRPSLPAR-ATLKP-PVLLRVSPSSASRKEPDR 301
           ++P  +PP  R  +PA+ ATL+P P++ +  P + +RK   R
Sbjct: 602 TVPEEEPPAPRSPVPAKQATLEPKPIVPKAEPKAKARKTEAR 643

>TAB3_XENLA (Q7ZXH3) Mitogen-activated protein kinase kinase kinase|
           7-interacting protein 3 homolog
          Length = 692

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -1

Query: 420 SIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRERISKWPSYVTMPP 259
           S   TQ    +P +P  A   PP     SP S+ + +    ++S   S+V +PP
Sbjct: 250 SFQPTQYSPKQPQIPQSAFRSPPTSQCTSPYSSPQHQVQTNQLSHQTSHVFLPP 303

>ZN446_HUMAN (Q9NWS9) Zinc finger protein 446|
          Length = 450

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -1

Query: 441 WTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRK 313
           W G++  + PA   PT RP  P   T   P   R+ P++  RK
Sbjct: 291 WEGLSGAATPA---PTVRPGTPPVPTQPTPAETRLEPAATPRK 330

>US29_HCMVA (P09705) Hypothetical protein HHRF4|
          Length = 462

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 414 PATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPD 304
           P+  PP  +  LPA+A L PP+     P   S + PD
Sbjct: 319 PSVAPPGEKKELPAQAALSPPLTTWSLPPFPSTRIPD 355

>IRF5_HUMAN (Q13568) Interferon regulatory factor 5 (IRF-5)|
          Length = 498

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 17/45 (37%), Positives = 20/45 (44%)
 Frame = -1

Query: 477 LLPSAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLL 343
           +LPS        W        P  QPPT RP      TL+PPV+L
Sbjct: 153 MLPSLSLTEDVKWP-------PTLQPPTLRPPTLQPPTLQPPVVL 190

>ZN207_HUMAN (O43670) Zinc finger protein 207|
          Length = 478

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = -1

Query: 420 SIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPDRERISK--WPSYVTMPPEVAG 247
           ++PA QPP T+P  P+   +  PV    S S+AS         SK  +PS       V G
Sbjct: 242 TVPAPQPPVTKPLFPSAGQMGTPV---TSSSTASSNSESLSASSKALFPSTAQAQAAVQG 298

>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1003

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
 Frame = -1

Query: 471 PSAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASR---KEPDR 301
           P  + L  +     +    P    PT RP +P+  T+ PP  LR  P S SR   + P+R
Sbjct: 302 PQTLPLDVSPGLPESGTRSPGLLSPTFRPGIPSSQTVPPP--LRKPPRSPSRSPSRSPNR 359

Query: 300 ERISKWPSYVTMPPEV 253
                    V +P  V
Sbjct: 360 SPCLPPAPEVALPKPV 375

>INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finger protein IA-1)|
          Length = 521

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 10/81 (12%)
 Frame = -1

Query: 471 PSAMKLPTTTWTGVAAISIPATQPPTT----------RPSLPARATLKPPVLLRVSPSSA 322
           P+ +K+ T    G  A   P T PP +          RP+ PA    +PP     +PS+ 
Sbjct: 167 PAELKMGTAFSAGAEAARGPGTGPPLSPAAALRPPGKRPAPPAAVATEPPAKAAKAPSA- 225

Query: 321 SRKEPDRERISKWPSYVTMPP 259
             K+P   R   +   VT  P
Sbjct: 226 --KKPKAIRKLHFEDEVTTSP 244

>KR171_HUMAN (Q9BYP8) Keratin-associated protein 17-1 (Keratin associated|
           protein 16.1)
          Length = 105

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 1/23 (4%)
 Frame = +1

Query: 388 TCCRRLCCWNAYG-CNACPGCGG 453
           +CC   CC +  G C  C GCGG
Sbjct: 51  SCCGSSCCGSGCGGCGGCGGCGG 73

>HSV2_CANAL (Q59P11) SVP1-like protein 2|
          Length = 595

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 12/34 (35%), Positives = 22/34 (64%)
 Frame = -3

Query: 454 AHHNLDRRCSHKHSSNTTSYNTSIASSQSNTQTT 353
           ++H+     ++ H +N+T  N S++SS SN +TT
Sbjct: 82  SNHSNGSNSNNNHRNNSTGSNGSVSSSGSNNETT 115

>EAF1_PONPY (Q5RAM8) ELL-associated factor 1|
          Length = 268

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 408 TQPPTTRPSLPARATLKPPVLLRVSP 331
           +QPP   P +P RA  KPPV  + SP
Sbjct: 134 SQPPPPPPPMPFRAPTKPPVGPKTSP 159

>EAF1_HUMAN (Q96JC9) ELL-associated factor 1|
          Length = 268

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -1

Query: 408 TQPPTTRPSLPARATLKPPVLLRVSP 331
           +QPP   P +P RA  KPPV  + SP
Sbjct: 134 SQPPPPPPPMPFRAPTKPPVGPKTSP 159

>PATJ_DROME (Q9NB04) Patj homolog|
          Length = 871

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = -1

Query: 399 PTTRPSLPARATLKPPVLLRVS----PSSASRKEPDRERISKWPSYVTMPPEV 253
           P++ P  P+RA +  PV    S    PS +  +E + E +    +++T PP V
Sbjct: 422 PSSAPGTPSRAPMPTPVATTSSATTTPSRSITRELEEEALPAPEAFMTTPPSV 474

>FA54A_MOUSE (Q8VED8) Protein FAM54A (DUF729 domain containing protein 1)|
          Length = 361

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = -1

Query: 483 GFL-LPSAMKLPTTTWTGVAAISIPATQ---PPTTRPSLPARATLKPPVLLRVSPSSASR 316
           GF+ L     LP++  TG++     A     PP   P LP + +L+PP    + P SA+ 
Sbjct: 190 GFIDLSDEQVLPSSATTGLSVEPDHAPSVVLPPPPPPPLPPQFSLQPPSSFPMQPGSANT 249

Query: 315 KEPD 304
            + D
Sbjct: 250 HDID 253

>XAPB_ECOLI (P45562) Xanthosine permease (Xanthosine transporter)|
          Length = 418

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
 Frame = +2

Query: 248 PATSGGI------VTYEGHFDILSLSGSFLLAEDGDT--RSRTGGLSVALAGSDGRVVGG 403
           P+T+G I      + Y   FD  ++SGS  + ++ D+  R+   GL + +    G  VG 
Sbjct: 303 PSTTGFILLLLSMIVYGCAFDFFNISGSVFVEQEVDSSIRASAQGLFMTMVNGVGAWVGS 362

Query: 404 CVAGM 418
            ++GM
Sbjct: 363 ILSGM 367

>TOP1_ZYMMO (Q9X3X7) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
            (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
            (Swivelase)
          Length = 1217

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = -1

Query: 477  LLPSAMKLPTTTWTGVAAISIPATQPPTTRPSLPARATLKPPVLLRVSPSSASRKEPD 304
            LL +  K+P    T  AA   PA +  TT+ + P +AT K       +  +A+ ++ D
Sbjct: 1108 LLEARAKMPKKKKTKKAAAKKPAAKKTTTKKAAPKKATTKTATPKSATTDNATSEDGD 1165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,850,301
Number of Sequences: 219361
Number of extensions: 1761944
Number of successful extensions: 7357
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 6353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7274
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)