ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baal40h21 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK100651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111D11, full insert sequence Length = 2070 Score = 632 bits (319), Expect = e-178 Identities = 550/627 (87%) Strand = Plus / Plus Query: 4 ctctcgggcctcgacgaggccgtcctgaagaacatcggcgccggccgcgagctctccgcc 63 ||||| |||||||| ||||||||||| |||||||||| |||| ||||||||||||||||| Sbjct: 169 ctctccggcctcgatgaggccgtcctcaagaacatcgacgcctgccgcgagctctccgcc 228 Query: 64 atcacccgaacctcccttggccccaacggaatgaataagatggtcattaatcatctagac 123 |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 229 atcacccgcacctccctcggccccaacggaatgaataagatggtcattaaccatctcgac 288 Query: 124 aagctctttatcacgaatgatgctgcaacaatcgtgaacgagcttgaggtccagcaccct 183 ||||||||| ||||||| |||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 289 aagctctttgtcacgaacgatgctgcaacaattgtgaatgagctcgaggtccagcaccct 348 Query: 184 gctgctaagctcctggtgctcgctgccagagcccaacaggaggagatcggggatggagct 243 ||||||||| ||||||| || |||| ||| || || |||||||| ||||| ||||||||| Sbjct: 349 gctgctaagatcctggtactagctggcagggctcagcaggaggaaatcggtgatggagct 408 Query: 244 aacctcaccatatctttcgcgggtgaactgctcgagaaggctgaggagctcatcaggatg 303 ||||||||||||||||| || ||||||||||| |||||||| |||||||| ||||||||| Sbjct: 409 aacctcaccatatcttttgctggtgaactgcttgagaaggccgaggagcttatcaggatg 468 Query: 304 ggactgcatccaagtgagatcatcattgggtataccaaggccattaataagacgcttgag 363 || ||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 469 gggttgcatccaagtgagatcatcattggctacaccaaggccattaataagactgttgag 528 Query: 364 attttggaggatctagttgagaaaggctcggaaaatatggatgtaaggaacacggaggag 423 || ||||| ||||| || |||||||| || ||||| |||||||| ||||||| ||||||| Sbjct: 529 atcttggaagatcttgtggagaaaggttcagaaaacatggatgtgaggaacaaggaggag 588 Query: 424 gtcatgttgaggatgaaatctgctgttgcaagcaagcaatttggccaggaggatgtgctg 483 || ||||| ||||| |||||| ||||| ||||||||||| || ||||||||| | || Sbjct: 589 gttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcaggaggatatattg 648 Query: 484 tgtccacttgtcgcggatgcctgtatccaagtttgccccaaaaatccggcaaactttaat 543 || || ||||| || ||||||||||| ||||| ||||| |||||||| || ||||| || Sbjct: 649 tgccctcttgtggctgatgcctgtatgcaagtctgcccgaaaaatcctgctaacttcaac 708 Query: 544 gttgacaatgttagagtggcaaagctggttggaggcggcctgcacaattcttctgtagtc 603 ||||||||||||||||| || || || ||||||| || ||||||| |||||||||||| Sbjct: 709 gttgacaatgttagagttgcgaaactacttggaggtggtttgcacaactcttctgtagtc 768 Query: 604 cgtggaatggttctgaaaaatgacgct 630 || || ||||||||||||||||||||| Sbjct: 769 cgggggatggttctgaaaaatgacgct 795
>ref|XM_470005.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2070 Score = 624 bits (315), Expect = e-176 Identities = 549/627 (87%) Strand = Plus / Plus Query: 4 ctctcgggcctcgacgaggccgtcctgaagaacatcggcgccggccgcgagctctccgcc 63 ||||| |||||||| ||||||||||| |||||||||| |||| ||||||||||||||||| Sbjct: 169 ctctccggcctcgatgaggccgtcctcaagaacatcgacgcctgccgcgagctctccgcc 228 Query: 64 atcacccgaacctcccttggccccaacggaatgaataagatggtcattaatcatctagac 123 |||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 229 atcacccgcacctccctcggccccaacggaatgaataagatggtcattaaccatctcgac 288 Query: 124 aagctctttatcacgaatgatgctgcaacaatcgtgaacgagcttgaggtccagcaccct 183 ||||||||| ||||||| |||||||||||||| ||||| ||||| ||||||||||||||| Sbjct: 289 aagctctttgtcacgaacgatgctgcaacaattgtgaatgagctcgaggtccagcaccct 348 Query: 184 gctgctaagctcctggtgctcgctgccagagcccaacaggaggagatcggggatggagct 243 ||||||||| ||||||| || |||| ||| || || |||||||| ||||| ||||||||| Sbjct: 349 gctgctaagatcctggtactagctggcagggctcagcaggaggaaatcggtgatggagct 408 Query: 244 aacctcaccatatctttcgcgggtgaactgctcgagaaggctgaggagctcatcaggatg 303 ||||||||||||||||| || ||||||||||| |||||||| |||||||| ||||||||| Sbjct: 409 aacctcaccatatcttttgctggtgaactgcttgagaaggccgaggagcttatcaggatg 468 Query: 304 ggactgcatccaagtgagatcatcattgggtataccaaggccattaataagacgcttgag 363 || ||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 469 gggttgcatccaagtgagatcatcattggctacaccaaggccattaataagactgttgag 528 Query: 364 attttggaggatctagttgagaaaggctcggaaaatatggatgtaaggaacacggaggag 423 || ||||| ||||| || |||||||| || || || |||||||| ||||||| ||||||| Sbjct: 529 atcttggaagatcttgtggagaaaggttcagagaacatggatgtgaggaacaaggaggag 588 Query: 424 gtcatgttgaggatgaaatctgctgttgcaagcaagcaatttggccaggaggatgtgctg 483 || ||||| ||||| |||||| ||||| ||||||||||| || ||||||||| | || Sbjct: 589 gttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcaggaggatatattg 648 Query: 484 tgtccacttgtcgcggatgcctgtatccaagtttgccccaaaaatccggcaaactttaat 543 || || ||||| || ||||||||||| ||||| ||||| |||||||| || ||||| || Sbjct: 649 tgccctcttgtggctgatgcctgtatgcaagtctgcccgaaaaatcctgctaacttcaac 708 Query: 544 gttgacaatgttagagtggcaaagctggttggaggcggcctgcacaattcttctgtagtc 603 ||||||||||||||||| || || || ||||||| || ||||||| |||||||||||| Sbjct: 709 gttgacaatgttagagttgcgaaactacttggaggtggtttgcacaactcttctgtagtc 768 Query: 604 cgtggaatggttctgaaaaatgacgct 630 || || ||||||||||||||||||||| Sbjct: 769 cgggggatggttctgaaaaatgacgct 795
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 325 bits (164), Expect = 1e-85 Identities = 239/264 (90%) Strand = Plus / Plus Query: 91 ggaatgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgca 150 ||||||||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||| Sbjct: 33289650 ggaatgaataagatggtcattaaccatctcgacaagctctttgtcacgaacgatgctgca 33289709 Query: 151 acaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctcgctgcc 210 ||||| ||||| ||||| |||||||||||||||||||||||| ||||||| || |||| | Sbjct: 33289710 acaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggtactagctggc 33289769 Query: 211 agagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcgggtgaa 270 || || || |||||||| ||||| |||||||||||||||||||||||||| || |||||| Sbjct: 33289770 agggctcagcaggaggaaatcggtgatggagctaacctcaccatatcttttgctggtgaa 33289829 Query: 271 ctgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatcatcatt 330 ||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 33289830 ctgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgagatcatcatt 33289889 Query: 331 gggtataccaaggccattaataag 354 || || |||||||||||||||||| Sbjct: 33289890 ggctacaccaaggccattaataag 33289913 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 4 ctctcgggcctcgacgaggccgtcctgaagaacatcggcgccggccgcgagctctccgcc 63 ||||| |||||||| ||||||||||| |||||||||| |||| ||||||||||||||||| Sbjct: 33289027 ctctccggcctcgatgaggccgtcctcaagaacatcgacgcctgccgcgagctctccgcc 33289086 Query: 64 atcacccgaacctcccttggccccaacgg 92 |||||||| |||||||| ||||||||||| Sbjct: 33289087 atcacccgcacctccctcggccccaacgg 33289115 Score = 113 bits (57), Expect = 7e-22 Identities = 111/129 (86%) Strand = Plus / Plus Query: 502 gcctgtatccaagtttgccccaaaaatccggcaaactttaatgttgacaatgttagagtg 561 |||||||| ||||| ||||| |||||||| || ||||| || ||||||||||||||||| Sbjct: 33290243 gcctgtatgcaagtctgcccgaaaaatcctgctaacttcaacgttgacaatgttagagtt 33290302 Query: 562 gcaaagctggttggaggcggcctgcacaattcttctgtagtccgtggaatggttctgaaa 621 || || || ||||||| || ||||||| |||||||||||||| || |||||||||||| Sbjct: 33290303 gcgaaactacttggaggtggtttgcacaactcttctgtagtccgggggatggttctgaaa 33290362 Query: 622 aatgacgct 630 ||||||||| Sbjct: 33290363 aatgacgct 33290371 Score = 85.7 bits (43), Expect = 2e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 359 ttgagattttggaggatctagttgagaaaggctcggaaaatatggatgtaaggaacacgg 418 ||||||| ||||| ||||| || |||||||| || || || |||||||| ||||||| || Sbjct: 33290018 ttgagatcttggaagatcttgtggagaaaggttcagagaacatggatgtgaggaacaagg 33290077 Query: 419 aggaggtcatgttgaggatgaaatctgctgttgcaagcaagcaatttggccaggaggat 477 ||||||| ||||| ||||| |||||| ||||| ||||||||||| || ||||||||| Sbjct: 33290078 aggaggttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcaggaggat 33290136 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 gaaatctgctgttgcaagca 457 |||||||||||||||||||| Sbjct: 26888450 gaaatctgctgttgcaagca 26888431
>gb|AC135563.5| Oryza sativa chromosome 3 BAC OSJNBb0015I02 genomic sequence, complete sequence Length = 122815 Score = 325 bits (164), Expect = 1e-85 Identities = 239/264 (90%) Strand = Plus / Plus Query: 91 ggaatgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgca 150 ||||||||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||| Sbjct: 46166 ggaatgaataagatggtcattaaccatctcgacaagctctttgtcacgaacgatgctgca 46225 Query: 151 acaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctcgctgcc 210 ||||| ||||| ||||| |||||||||||||||||||||||| ||||||| || |||| | Sbjct: 46226 acaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggtactagctggc 46285 Query: 211 agagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcgggtgaa 270 || || || |||||||| ||||| |||||||||||||||||||||||||| || |||||| Sbjct: 46286 agggctcagcaggaggaaatcggtgatggagctaacctcaccatatcttttgctggtgaa 46345 Query: 271 ctgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatcatcatt 330 ||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 46346 ctgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgagatcatcatt 46405 Query: 331 gggtataccaaggccattaataag 354 || || |||||||||||||||||| Sbjct: 46406 ggctacaccaaggccattaataag 46429 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 4 ctctcgggcctcgacgaggccgtcctgaagaacatcggcgccggccgcgagctctccgcc 63 ||||| |||||||| ||||||||||| |||||||||| |||| ||||||||||||||||| Sbjct: 45543 ctctccggcctcgatgaggccgtcctcaagaacatcgacgcctgccgcgagctctccgcc 45602 Query: 64 atcacccgaacctcccttggccccaacgg 92 |||||||| |||||||| ||||||||||| Sbjct: 45603 atcacccgcacctccctcggccccaacgg 45631 Score = 113 bits (57), Expect = 7e-22 Identities = 111/129 (86%) Strand = Plus / Plus Query: 502 gcctgtatccaagtttgccccaaaaatccggcaaactttaatgttgacaatgttagagtg 561 |||||||| ||||| ||||| |||||||| || ||||| || ||||||||||||||||| Sbjct: 46759 gcctgtatgcaagtctgcccgaaaaatcctgctaacttcaacgttgacaatgttagagtt 46818 Query: 562 gcaaagctggttggaggcggcctgcacaattcttctgtagtccgtggaatggttctgaaa 621 || || || ||||||| || ||||||| |||||||||||||| || |||||||||||| Sbjct: 46819 gcgaaactacttggaggtggtttgcacaactcttctgtagtccgggggatggttctgaaa 46878 Query: 622 aatgacgct 630 ||||||||| Sbjct: 46879 aatgacgct 46887 Score = 85.7 bits (43), Expect = 2e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 359 ttgagattttggaggatctagttgagaaaggctcggaaaatatggatgtaaggaacacgg 418 ||||||| ||||| ||||| || |||||||| || || || |||||||| ||||||| || Sbjct: 46534 ttgagatcttggaagatcttgtggagaaaggttcagagaacatggatgtgaggaacaagg 46593 Query: 419 aggaggtcatgttgaggatgaaatctgctgttgcaagcaagcaatttggccaggaggat 477 ||||||| ||||| ||||| |||||| ||||| ||||||||||| || ||||||||| Sbjct: 46594 aggaggttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcaggaggat 46652
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 325 bits (164), Expect = 1e-85 Identities = 239/264 (90%) Strand = Plus / Plus Query: 91 ggaatgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgca 150 ||||||||||||||||||||||| ||||| |||||||||||| ||||||| ||||||||| Sbjct: 33380160 ggaatgaataagatggtcattaaccatctcgacaagctctttgtcacgaacgatgctgca 33380219 Query: 151 acaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctcgctgcc 210 ||||| ||||| ||||| |||||||||||||||||||||||| ||||||| || |||| | Sbjct: 33380220 acaattgtgaatgagctcgaggtccagcaccctgctgctaagatcctggtactagctggc 33380279 Query: 211 agagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcgggtgaa 270 || || || |||||||| ||||| |||||||||||||||||||||||||| || |||||| Sbjct: 33380280 agggctcagcaggaggaaatcggtgatggagctaacctcaccatatcttttgctggtgaa 33380339 Query: 271 ctgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatcatcatt 330 ||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 33380340 ctgcttgagaaggccgaggagcttatcaggatggggttgcatccaagtgagatcatcatt 33380399 Query: 331 gggtataccaaggccattaataag 354 || || |||||||||||||||||| Sbjct: 33380400 ggctacaccaaggccattaataag 33380423 Score = 121 bits (61), Expect = 3e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 4 ctctcgggcctcgacgaggccgtcctgaagaacatcggcgccggccgcgagctctccgcc 63 ||||| |||||||| ||||||||||| |||||||||| |||| ||||||||||||||||| Sbjct: 33379537 ctctccggcctcgatgaggccgtcctcaagaacatcgacgcctgccgcgagctctccgcc 33379596 Query: 64 atcacccgaacctcccttggccccaacgg 92 |||||||| |||||||| ||||||||||| Sbjct: 33379597 atcacccgcacctccctcggccccaacgg 33379625 Score = 113 bits (57), Expect = 7e-22 Identities = 111/129 (86%) Strand = Plus / Plus Query: 502 gcctgtatccaagtttgccccaaaaatccggcaaactttaatgttgacaatgttagagtg 561 |||||||| ||||| ||||| |||||||| || ||||| || ||||||||||||||||| Sbjct: 33380753 gcctgtatgcaagtctgcccgaaaaatcctgctaacttcaacgttgacaatgttagagtt 33380812 Query: 562 gcaaagctggttggaggcggcctgcacaattcttctgtagtccgtggaatggttctgaaa 621 || || || ||||||| || ||||||| |||||||||||||| || |||||||||||| Sbjct: 33380813 gcgaaactacttggaggtggtttgcacaactcttctgtagtccgggggatggttctgaaa 33380872 Query: 622 aatgacgct 630 ||||||||| Sbjct: 33380873 aatgacgct 33380881 Score = 85.7 bits (43), Expect = 2e-13 Identities = 100/119 (84%) Strand = Plus / Plus Query: 359 ttgagattttggaggatctagttgagaaaggctcggaaaatatggatgtaaggaacacgg 418 ||||||| ||||| ||||| || |||||||| || || || |||||||| ||||||| || Sbjct: 33380528 ttgagatcttggaagatcttgtggagaaaggttcagagaacatggatgtgaggaacaagg 33380587 Query: 419 aggaggtcatgttgaggatgaaatctgctgttgcaagcaagcaatttggccaggaggat 477 ||||||| ||||| ||||| |||||| ||||| ||||||||||| || ||||||||| Sbjct: 33380588 aggaggttgtgttgctgatgagatctgcagttgcgagcaagcaattcggtcaggaggat 33380646 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 gaaatctgctgttgcaagca 457 |||||||||||||||||||| Sbjct: 26979773 gaaatctgctgttgcaagca 26979754
>gb|AC133218.3| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0549G05, complete sequence Length = 147182 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 95 tgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgcaacaa 154 ||||||||||||||||| | ||||| |||||||||||| |||| || | ||||||||||| Sbjct: 63668 tgaataagatggtcattgaccatctcgacaagctctttgtcacaaacgctgctgcaacaa 63727 Query: 155 tcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggt 200 | |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 63728 ttgtgaacgagcttgaggtccagcaccctgctgctaagatcctggt 63773 Score = 75.8 bits (38), Expect = 2e-10 Identities = 87/102 (85%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 224 aggagatcggggatggagctaacctcaccatatctttcgcgggt-gaactgctcgagaag 282 ||||||| || |||||||||||||||||||||||||| || | | | ||||| |||||| Sbjct: 63788 aggagattggtgatggagctaacctcaccatatcttttgctgatggggctgcttgagaag 63847 Query: 283 gctgaggagctcatcaggatgggactgcatccaagtgagatc 324 ||| ||||||| |||||||||| |||||||||||| |||| Sbjct: 63848 gctaaggagcttgtcaggatggggttgcatccaagtgtgatc 63889
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 95 tgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgcaacaa 154 ||||||||||||||||| | ||||| |||||||||||| |||| || | ||||||||||| Sbjct: 20942056 tgaataagatggtcattgaccatctcgacaagctctttgtcacaaacgctgctgcaacaa 20942115 Query: 155 tcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggt 200 | |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 20942116 ttgtgaacgagcttgaggtccagcaccctgctgctaagatcctggt 20942161 Score = 75.8 bits (38), Expect = 2e-10 Identities = 87/102 (85%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 224 aggagatcggggatggagctaacctcaccatatctttcgcgggt-gaactgctcgagaag 282 ||||||| || |||||||||||||||||||||||||| || | | | ||||| |||||| Sbjct: 20942176 aggagattggtgatggagctaacctcaccatatcttttgctgatggggctgcttgagaag 20942235 Query: 283 gctgaggagctcatcaggatgggactgcatccaagtgagatc 324 ||| ||||||| |||||||||| |||||||||||| |||| Sbjct: 20942236 gctaaggagcttgtcaggatggggttgcatccaagtgtgatc 20942277 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 41 gcgccggccgcgagctctccgcc 63 ||||||||||||||||||||||| Sbjct: 9499074 gcgccggccgcgagctctccgcc 9499052
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 139 bits (70), Expect = 1e-29 Identities = 97/106 (91%) Strand = Plus / Plus Query: 95 tgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgcaacaa 154 ||||||||||||||||| | ||||| |||||||||||| |||| || | ||||||||||| Sbjct: 21252291 tgaataagatggtcattgaccatctcgacaagctctttgtcacaaacgctgctgcaacaa 21252350 Query: 155 tcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggt 200 | |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 21252351 ttgtgaacgagcttgaggtccagcaccctgctgctaagatcctggt 21252396 Score = 75.8 bits (38), Expect = 2e-10 Identities = 87/102 (85%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 224 aggagatcggggatggagctaacctcaccatatctttcgcgggt-gaactgctcgagaag 282 ||||||| || |||||||||||||||||||||||||| || | | | ||||| |||||| Sbjct: 21252411 aggagattggtgatggagctaacctcaccatatcttttgctgatggggctgcttgagaag 21252470 Query: 283 gctgaggagctcatcaggatgggactgcatccaagtgagatc 324 ||| ||||||| |||||||||| |||||||||||| |||| Sbjct: 21252471 gctaaggagcttgtcaggatggggttgcatccaagtgtgatc 21252512 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 41 gcgccggccgcgagctctccgcc 63 ||||||||||||||||||||||| Sbjct: 9570771 gcgccggccgcgagctctccgcc 9570749
>emb|BX823289.1|CNS0A7D6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS1ZF10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2049 Score = 117 bits (59), Expect = 5e-23 Identities = 221/275 (80%) Strand = Plus / Plus Query: 52 gagctctccgccatcacccgaacctcccttggccccaacggaatgaataagatggtcatt 111 ||||||||| |||| || || ||||| || || ||||| ||||||||||||||||| || Sbjct: 257 gagctctccaccattactcgcacctctctcggtcccaatggaatgaataagatggttatc 316 Query: 112 aatcatctagacaagctctttatcacgaatgatgctgcaacaatcgtgaacgagcttgag 171 |||||| | ||||| || ||| |||| ||||| ||||| || || ||||| ||||| ||| Sbjct: 317 aatcatttggacaaactgtttgtcacaaatgacgctgctactatagtgaatgagctcgag 376 Query: 172 gtccagcaccctgctgctaagctcctggtgctcgctgccagagcccaacaggaggagatc 231 | |||||||| |||||||| || ||||| | ||||| | || || || || || ||| Sbjct: 377 attcagcacccggctgctaaacttctggttttagctgctaaggctcagcaagaagaaatc 436 Query: 232 ggggatggagctaacctcaccatatctttcgcgggtgaactgctcgagaaggctgaggag 291 || ||||||||||| || || || || || || |||||||| || | || ||||||||| Sbjct: 437 ggagatggagctaatctgacaatctcctttgctggtgaacttcttcaaaacgctgaggag 496 Query: 292 ctcatcaggatgggactgcatccaagtgagatcat 326 || |||||||||||||| ||||| ||||||||||| Sbjct: 497 cttatcaggatgggacttcatccgagtgagatcat 531 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 445 gctgttgcaagcaagcaatttggccaggagga 476 ||||||||||||||||| ||||| || ||||| Sbjct: 650 gctgttgcaagcaagcagtttgggcaagagga 681
>ref|NM_111267.3| Arabidopsis thaliana ATP binding / protein binding AT3G03960 mRNA, complete cds Length = 2054 Score = 109 bits (55), Expect = 1e-20 Identities = 220/275 (80%) Strand = Plus / Plus Query: 52 gagctctccgccatcacccgaacctcccttggccccaacggaatgaataagatggtcatt 111 ||||||||| |||| || || ||||| || || ||||| ||||||||||| ||||| || Sbjct: 257 gagctctccaccattactcgcacctctctcggtcccaatggaatgaataaaatggttatc 316 Query: 112 aatcatctagacaagctctttatcacgaatgatgctgcaacaatcgtgaacgagcttgag 171 |||||| | ||||| || ||| |||| ||||| ||||| || || ||||| ||||| ||| Sbjct: 317 aatcatttggacaaactgtttgtcacaaatgacgctgctactatagtgaatgagctcgag 376 Query: 172 gtccagcaccctgctgctaagctcctggtgctcgctgccagagcccaacaggaggagatc 231 | |||||||| |||||||| || ||||| | ||||| | || || || || || ||| Sbjct: 377 attcagcacccggctgctaaacttctggttttagctgctaaggctcagcaagaagaaatc 436 Query: 232 ggggatggagctaacctcaccatatctttcgcgggtgaactgctcgagaaggctgaggag 291 || ||||||||||| || || || || || || |||||||| || | || ||||||||| Sbjct: 437 ggagatggagctaatctgacaatctcctttgctggtgaacttcttcaaaacgctgaggag 496 Query: 292 ctcatcaggatgggactgcatccaagtgagatcat 326 || |||||||||||||| ||||| ||||||||||| Sbjct: 497 cttatcaggatgggacttcatccgagtgagatcat 531 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 445 gctgttgcaagcaagcaatttggccaggagga 476 ||||||||||||||||| ||||| || ||||| Sbjct: 650 gctgttgcaagcaagcagtttgggcaagagga 681
>gb|BT010388.1| Arabidopsis thaliana At3g03960 mRNA, complete cds Length = 1650 Score = 109 bits (55), Expect = 1e-20 Identities = 220/275 (80%) Strand = Plus / Plus Query: 52 gagctctccgccatcacccgaacctcccttggccccaacggaatgaataagatggtcatt 111 ||||||||| |||| || || ||||| || || ||||| ||||||||||| ||||| || Sbjct: 112 gagctctccaccattactcgcacctctctcggtcccaatggaatgaataaaatggttatc 171 Query: 112 aatcatctagacaagctctttatcacgaatgatgctgcaacaatcgtgaacgagcttgag 171 |||||| | ||||| || ||| |||| ||||| ||||| || || ||||| ||||| ||| Sbjct: 172 aatcatttggacaaactgtttgtcacaaatgacgctgctactatagtgaatgagctcgag 231 Query: 172 gtccagcaccctgctgctaagctcctggtgctcgctgccagagcccaacaggaggagatc 231 | |||||||| |||||||| || ||||| | ||||| | || || || || || ||| Sbjct: 232 attcagcacccggctgctaaacttctggttttagctgctaaggctcagcaagaagaaatc 291 Query: 232 ggggatggagctaacctcaccatatctttcgcgggtgaactgctcgagaaggctgaggag 291 || ||||||||||| || || || || || || |||||||| || | || ||||||||| Sbjct: 292 ggagatggagctaatctgacaatctcctttgctggtgaacttcttcaaaacgctgaggag 351 Query: 292 ctcatcaggatgggactgcatccaagtgagatcat 326 || |||||||||||||| ||||| ||||||||||| Sbjct: 352 cttatcaggatgggacttcatccgagtgagatcat 386 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 445 gctgttgcaagcaagcaatttggccaggagga 476 ||||||||||||||||| ||||| || ||||| Sbjct: 505 gctgttgcaagcaagcagtttgggcaagagga 536
>gb|AF370490.1|AF370490 Arabidopsis thaliana putative T-complex protein 1, theta subunit; TCP-1-Theta (T11I18.7) mRNA, complete cds Length = 1932 Score = 109 bits (55), Expect = 1e-20 Identities = 220/275 (80%) Strand = Plus / Plus Query: 52 gagctctccgccatcacccgaacctcccttggccccaacggaatgaataagatggtcatt 111 ||||||||| |||| || || ||||| || || ||||| ||||||||||| ||||| || Sbjct: 252 gagctctccaccattactcgcacctctctcggtcccaatggaatgaataaaatggttatc 311 Query: 112 aatcatctagacaagctctttatcacgaatgatgctgcaacaatcgtgaacgagcttgag 171 |||||| | ||||| || ||| |||| ||||| ||||| || || ||||| ||||| ||| Sbjct: 312 aatcatttggacaaactgtttgtcacaaatgacgctgctactatagtgaatgagctcgag 371 Query: 172 gtccagcaccctgctgctaagctcctggtgctcgctgccagagcccaacaggaggagatc 231 | |||||||| |||||||| || ||||| | ||||| | || || || || || ||| Sbjct: 372 attcagcacccggctgctaaacttctggttttagctgctaaggctcagcaagaagaaatc 431 Query: 232 ggggatggagctaacctcaccatatctttcgcgggtgaactgctcgagaaggctgaggag 291 || ||||||||||| || || || || || || |||||||| || | || ||||||||| Sbjct: 432 ggagatggagctaatctgacaatctcctttgctggtgaacttcttcaaaacgctgaggag 491 Query: 292 ctcatcaggatgggactgcatccaagtgagatcat 326 || |||||||||||||| ||||| ||||||||||| Sbjct: 492 cttatcaggatgggacttcatccgagtgagatcat 526 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 445 gctgttgcaagcaagcaatttggccaggagga 476 ||||||||||||||||| ||||| || ||||| Sbjct: 645 gctgttgcaagcaagcagtttgggcaagagga 676
>gb|AC011698.6|ATAC011698 Arabidopsis thaliana chromosome III BAC T11I18 genomic sequence, complete sequence Length = 63654 Score = 95.6 bits (48), Expect = 2e-16 Identities = 189/236 (80%) Strand = Plus / Plus Query: 91 ggaatgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgca 150 ||||||||||| ||||| || |||||| | ||||| || ||| |||| ||||| ||||| Sbjct: 21435 ggaatgaataaaatggttatcaatcatttggacaaactgtttgtcacaaatgacgctgct 21494 Query: 151 acaatcgtgaacgagcttgaggtccagcaccctgctgctaagctcctggtgctcgctgcc 210 || || ||||| ||||| ||| | |||||||| |||||||| || ||||| | ||||| Sbjct: 21495 actatagtgaatgagctcgagattcagcacccggctgctaaacttctggttttagctgct 21554 Query: 211 agagcccaacaggaggagatcggggatggagctaacctcaccatatctttcgcgggtgaa 270 | || || || || || ||||| ||||||||||| || || || || || || |||||| Sbjct: 21555 aaggctcagcaagaagaaatcggagatggagctaatctgacaatctcctttgctggtgaa 21614 Query: 271 ctgctcgagaaggctgaggagctcatcaggatgggactgcatccaagtgagatcat 326 || || | || ||||||||||| |||||||||||||| ||||| ||||||||||| Sbjct: 21615 cttcttcaaaacgctgaggagcttatcaggatgggacttcatccgagtgagatcat 21670 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 445 gctgttgcaagcaagcaatttggccaggagga 476 ||||||||||||||||| ||||| || ||||| Sbjct: 21877 gctgttgcaagcaagcagtttgggcaagagga 21908
>dbj|AP004491.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT17G08, TM0023, complete sequence Length = 91039 Score = 85.7 bits (43), Expect = 2e-13 Identities = 82/95 (86%) Strand = Plus / Minus Query: 94 atgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgcaaca 153 |||||||||||||| ||||||||| | |||||||| ||| |||||||||| || || ||| Sbjct: 77620 atgaataagatggttattaatcatttggacaagctttttgtcacgaatgacgccgctaca 77561 Query: 154 atcgtgaacgagcttgaggtccagcaccctgctgc 188 || ||||| |||||||| || ||||| |||||||| Sbjct: 77560 attgtgaatgagcttgaagttcagcatcctgctgc 77526 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 508 atccaagtttgccccaaaaatccggcaaactttaatgttgacaatgtt 555 |||||||| ||||| ||||| || |||||||||||||| ||||||||| Sbjct: 76651 atccaagtgtgcccaaaaaaccctgcaaactttaatgtggacaatgtt 76604 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 283 gctgaggagctcatcaggatgggactgcatccaagtgagatcatcattgggtataccaa 341 ||||||||||| ||||||||||| |||| || || |||||||||| ||| |||||||| Sbjct: 77431 gctgaggagcttatcaggatgggtttgcacccgagcgagatcatcagtggatataccaa 77373
>ref|XM_783013.1| PREDICTED: Strongylocentrotus purpuratus similar to chaperonin containing TCP1, subunit 8 (theta) (LOC583086), partial mRNA Length = 1407 Score = 69.9 bits (35), Expect = 1e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 94 atgaataagatggtcattaatcatctagacaagctctttatcacgaatgatgctgcaaca 153 ||||||||||||||||| || || |||| ||||||||| |||| ||||| |||||||| Sbjct: 112 atgaataagatggtcatcaaccacatagagaagctctttgtcacaaatgacgctgcaacc 171 Query: 154 atcgtgaacgagcttgaggtccagcaccctgctgctaag 192 || | || ||| | ||||| |||||||||||||||||| Sbjct: 172 attctcaaagagttggaggttcagcaccctgctgctaag 210
>gb|AY393846.1| Gallus gallus chaperonin subunit 8 theta mRNA, complete cds Length = 1647 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 85 cccaacggaatgaataagatggtcattaatcatctagacaagctctttatcacgaatgat 144 ||||| |||||||| || ||||| || |||||||| || ||||| ||| | || |||||| Sbjct: 145 cccaatggaatgaacaaaatggttatcaatcatctggagaagctttttgttacaaatgat 204 Query: 145 gctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgc 188 ||||| || ||| ||| ||| | ||||||||||| |||||||| Sbjct: 205 gctgctactatcttgagagagttggaggtccagcatcctgctgc 248
>ref|NM_001004389.1| Gallus gallus chaperonin containing TCP1, subunit 8 (theta) (CCT8), mRNA Length = 1647 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 85 cccaacggaatgaataagatggtcattaatcatctagacaagctctttatcacgaatgat 144 ||||| |||||||| || ||||| || |||||||| || ||||| ||| | || |||||| Sbjct: 145 cccaatggaatgaacaaaatggttatcaatcatctggagaagctttttgttacaaatgat 204 Query: 145 gctgcaacaatcgtgaacgagcttgaggtccagcaccctgctgc 188 ||||| || ||| ||| ||| | ||||||||||| |||||||| Sbjct: 205 gctgctactatcttgagagagttggaggtccagcatcctgctgc 248
>gb|AC135957.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0037P02 map E61794SA, complete sequence Length = 131645 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 41 gcgccggccgcgagctctccgcc 63 ||||||||||||||||||||||| Sbjct: 52257 gcgccggccgcgagctctccgcc 52235
>ref|XM_385795.1| Gibberella zeae PH-1 chromosome 3 conserved hypothetical protein (FG05619.1) partial mRNA Length = 5052 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 271 ctgctcgagaaggctgaggagctcatc 297 ||||||||||||||||| ||||||||| Sbjct: 3939 ctgctcgagaaggctgatgagctcatc 3913
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 41 gcgccggccgcgagctctccgcc 63 ||||||||||||||||||||||| Sbjct: 24674916 gcgccggccgcgagctctccgcc 24674894
>emb|AL606629.3|OSJN00061 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0091E11, complete sequence Length = 133856 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 41 gcgccggccgcgagctctccgcc 63 ||||||||||||||||||||||| Sbjct: 64439 gcgccggccgcgagctctccgcc 64417
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 35 acatcggcgccggccgcgagc 55 ||||||||||||||||||||| Sbjct: 1476880 acatcggcgccggccgcgagc 1476860
>ref|NM_112896.2| Arabidopsis thaliana ATTCP-1; ATP binding / protein binding AT3G20050 (ATTCP-1) mRNA, complete cds Length = 2063 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gaggtccagcaccctgctgctaag 192 |||||| ||||||||||||||||| Sbjct: 340 gaggtcgagcaccctgctgctaag 363
>ref|XM_525933.1| PREDICTED: Pan troglodytes similar to Polyadenylate-binding protein 1 (Poly(A)-binding protein 1) (PABP 1) (LOC470552), mRNA Length = 1119 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 agcaatttggccaggaggat 477 |||||||||||||||||||| Sbjct: 729 agcaatttggccaggaggat 710
>gb|AC120558.12| Mus musculus chromosome 18, clone RP24-494K12, complete sequence Length = 216435 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 ggccaggaggatgtgctgtg 485 |||||||||||||||||||| Sbjct: 216156 ggccaggaggatgtgctgtg 216137
>gb|AC132098.4| Mus musculus BAC clone RP24-401I1 from chromosome 18, complete sequence Length = 154520 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 ggccaggaggatgtgctgtg 485 |||||||||||||||||||| Sbjct: 123129 ggccaggaggatgtgctgtg 123110
>gb|AC100751.6| Mus musculus chromosome 18, clone RP23-249P18, complete sequence Length = 253910 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 agctcatcaggatgggactg 309 |||||||||||||||||||| Sbjct: 86843 agctcatcaggatgggactg 86824
>gb|BC033032.1| Homo sapiens cDNA clone IMAGE:5268495 Length = 2657 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 agcaatttggccaggaggat 477 |||||||||||||||||||| Sbjct: 1278 agcaatttggccaggaggat 1259
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ggccgtcctgaagaacatcg 40 |||||||||||||||||||| Sbjct: 221751 ggccgtcctgaagaacatcg 221732
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 gaaatctgctgttgcaagca 457 |||||||||||||||||||| Sbjct: 67450 gaaatctgctgttgcaagca 67431
>gb|BC068242.1| Homo sapiens poly(A) binding protein, cytoplasmic, pseudogene 2, mRNA (cDNA clone MGC:51329 IMAGE:5267930), complete cds Length = 3313 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 agcaatttggccaggaggat 477 |||||||||||||||||||| Sbjct: 1027 agcaatttggccaggaggat 1008
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 acatcggcgccggccgcgag 54 |||||||||||||||||||| Sbjct: 102048 acatcggcgccggccgcgag 102067
>emb|X74334.1|AEFHPG A.eutrophus fhp gene for flavohemoprotein Length = 1490 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 ggccgtcctgaagaacatcg 40 |||||||||||||||||||| Sbjct: 389 ggccgtcctgaagaacatcg 408
>ref|NM_058568.2| Caenorhabditis elegans Y39G10AR.17 (Y39G10AR.17) mRNA, complete cds Length = 1650 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tcgggcctcgacgaggccgt 26 |||||||||||||||||||| Sbjct: 610 tcgggcctcgacgaggccgt 591
>ref|NG_001267.1| Homo sapiens poly(A) binding protein, cytoplasmic, pseudogene 2 (PABPCP2) on chromosome 14 Length = 3258 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 agcaatttggccaggaggat 477 |||||||||||||||||||| Sbjct: 1815 agcaatttggccaggaggat 1796
>tpg|BK005598.1| TPA: TPA_exp: Homo sapiens NSP (NSP) gene, complete cds, alternatively spliced Length = 227735 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctgcatccaagtgagatcat 326 |||||||||||||||||||| Sbjct: 38581 ctgcatccaagtgagatcat 38600
>gb|AF132027.1|AF132027 Homo sapiens poly(A)-binding protein-related mRNA Length = 1909 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 agcaatttggccaggaggat 477 |||||||||||||||||||| Sbjct: 1294 agcaatttggccaggaggat 1275
>emb|BX823612.1|CNS0A4WG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZH05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1961 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gaggtccagcaccctgctgctaag 192 |||||| ||||||||||||||||| Sbjct: 324 gaggtcgagcaccctgctgctaag 347
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome Length = 2088737 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tccagcaccctgctgctaag 192 |||||||||||||||||||| Sbjct: 2085050 tccagcaccctgctgctaag 2085069
>gb|AC093113.4| Homo sapiens BAC clone RP11-789A18 from 2, complete sequence Length = 175556 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 agcaatttggccaggaggat 477 |||||||||||||||||||| Sbjct: 8910 agcaatttggccaggaggat 8891
>gb|AC154524.2| Mus musculus BAC clone RP24-68D23 from chromosome 16, complete sequence Length = 252926 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 474 ggatgtgctgtgtccacttg 493 |||||||||||||||||||| Sbjct: 153846 ggatgtgctgtgtccacttg 153827
>gb|AC007963.7|AC007963 Homo sapiens chromosome 17, clone CTD-2010G8, complete sequence Length = 133488 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 ctgcatccaagtgagatcat 326 |||||||||||||||||||| Sbjct: 88636 ctgcatccaagtgagatcat 88655
>gb|AC025716.2| Caenorhabditis elegans cosmid Y39G10AR, complete sequence Length = 132558 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 tcgggcctcgacgaggccgt 26 |||||||||||||||||||| Sbjct: 99514 tcgggcctcgacgaggccgt 99533
>dbj|AP000383.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MAL21 Length = 83253 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 gaggtccagcaccctgctgctaag 192 |||||| ||||||||||||||||| Sbjct: 21891 gaggtcgagcaccctgctgctaag 21868
>dbj|D11351.1|ATHTCP1H A. thaliana mRNA for t-complex polypeptide 1 homologue, complete cds Length = 2024 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gaggtccagcaccctgctgctaag 192 |||||| ||||||||||||||||| Sbjct: 339 gaggtcgagcaccctgctgctaag 362
>dbj|D11352.1| Arabidopsis thaliana DNA for CCT alpha/TCP-1, complete cds Length = 6533 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gaggtccagcaccctgctgctaag 192 |||||| ||||||||||||||||| Sbjct: 2285 gaggtcgagcaccctgctgctaag 2308
>gb|AY389884.1| Uncultured archaeon clone NBFF33 putative thermosome subunit gene, partial cds Length = 700 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 169 gaggtccagcaccctgctgctaagctcctggt 200 ||||| ||||||||||| || ||||||||||| Sbjct: 259 gaggttcagcaccctgccgcgaagctcctggt 290
>gb|BT002052.1| Arabidopsis thaliana t-complex polypeptide 1 homologue (At3g20050) mRNA, complete cds Length = 2022 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gaggtccagcaccctgctgctaag 192 |||||| ||||||||||||||||| Sbjct: 338 gaggtcgagcaccctgctgctaag 361
>emb|BX908390.7| Zebrafish DNA sequence from clone CH211-113C15 in linkage group 18, complete sequence Length = 31676 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 ttgcaagcaagcaatttggc 468 |||||||||||||||||||| Sbjct: 27148 ttgcaagcaagcaatttggc 27129
>emb|AL929264.4| Zebrafish DNA sequence from clone CH211-59C24 in linkage group 18, complete sequence Length = 171914 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 449 ttgcaagcaagcaatttggc 468 |||||||||||||||||||| Sbjct: 99278 ttgcaagcaagcaatttggc 99297
>gb|BT021103.1| Arabidopsis thaliana At3g20050 gene, complete cds Length = 1718 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 gaggtccagcaccctgctgctaag 192 |||||| ||||||||||||||||| Sbjct: 256 gaggtcgagcaccctgctgctaag 279
>gb|U60801.1|HSU60801 Human poly(A)-binding protein (PABP) processed pseudogene2, complete cds Length = 3258 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 agcaatttggccaggaggat 477 |||||||||||||||||||| Sbjct: 1815 agcaatttggccaggaggat 1796
>dbj|D29672.1|PYWHSP Pyrococcus sp. KOD1 gene for heat-shock protein, complete cds Length = 1838 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tccagcaccctgctgctaag 192 |||||||||||||||||||| Sbjct: 319 tccagcaccctgctgctaag 338
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ggcctcgacgaggccgtcct 29 |||||||||||||||||||| Sbjct: 2379747 ggcctcgacgaggccgtcct 2379766
>gb|AC151409.2| Mus musculus BAC clone RP24-541K8 from 18, complete sequence Length = 179265 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 466 ggccaggaggatgtgctgtg 485 |||||||||||||||||||| Sbjct: 18324 ggccaggaggatgtgctgtg 18305
>dbj|AB001083.1| Thermococcus sp. DNA for chaperonin beta subunit, complete cds Length = 2030 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tccagcaccctgctgctaag 192 |||||||||||||||||||| Sbjct: 428 tccagcaccctgctgctaag 447
>dbj|AB001081.2| Thermococcus sp. DNA for chaperonin beta subunit, complete cds Length = 1980 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 tccagcaccctgctgctaag 192 |||||||||||||||||||| Sbjct: 368 tccagcaccctgctgctaag 387 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,896,902 Number of Sequences: 3902068 Number of extensions: 4896902 Number of successful extensions: 90575 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89975 Number of HSP's gapped (non-prelim): 599 length of query: 630 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 607 effective length of database: 17,143,297,704 effective search space: 10405981706328 effective search space used: 10405981706328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
