ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal40h11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469008.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
2gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genom... 60 6e-06
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 60 6e-06
4gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genom... 60 6e-06
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
6gb|AY108753.1| Zea mays PCO090965 mRNA sequence 54 4e-04
7emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete ... 48 0.025
8gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 gen... 44 0.38
9emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4,... 44 0.38
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
12dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
13dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
14dbj|AK110629.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
15dbj|AK102352.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.38
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.38
17ref|XM_472987.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
18gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
19gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
20gb|AC131999.9| Mus musculus chromosome 15, clone RP24-139E21, co... 42 1.5
21gb|AC122303.2| Mus musculus BAC clone RP23-279L13 from 6, comple... 42 1.5
22emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
23emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
24dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
25dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
26dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
27gb|DQ022844.1| Oryza sativa (japonica cultivar-group) cytochrome... 42 1.5
28dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.5
29dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
30dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
31dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
32dbj|AK121238.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
33dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
34dbj|AK104854.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
35dbj|AK066522.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
36emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 1.5
37gb|AF128442.1|AF128442 Lolium perenne pollen allergen Lol p VA p... 42 1.5
38gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
39emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310... 42 1.5
40emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
41emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.5
42emb|AL929556.14| Mouse DNA sequence from clone RP23-353B17 on ch... 42 1.5
43ref|XM_476087.1| Oryza sativa (japonica cultivar-group), predic... 40 6.0
44gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
45ref|XM_476932.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
46gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
47gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosom... 40 6.0
48gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
49gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 40 6.0
50gb|AF142884.1| Uncultured archaeon DEEP-10 16S ribosomal RNA gen... 40 6.0
51gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosom... 40 6.0
52emb|AL360269.21| Human DNA sequence from clone RP11-192I3 on chr... 40 6.0
53emb|AL359710.15| Human DNA sequence from clone RP11-30L7 on chro... 40 6.0
54emb|BX546480.9| Zebrafish DNA sequence from clone DKEY-175C11, c... 40 6.0
55gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 6.0
56dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
57dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.0
58dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.0
59dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
60dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
61dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
62dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
63dbj|AK111777.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
64dbj|AK110966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
65emb|AJ327848.1|HSA327848 Homo sapiens genomic sequence surroundi... 40 6.0
66gb|AC154828.2| Mus musculus BAC clone RP24-549A19 from 13, compl... 40 6.0
67emb|AL590764.3|HS1091N2 Homo sapiens chromosome X from PAC 1091N... 40 6.0
68emb|CR318592.7| Zebrafish DNA sequence from clone CH211-51F17 in... 40 6.0
69dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
70dbj|AP001024.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.0
71dbj|AP002353.4| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 6.0
72dbj|AB009371.1| Mus musculus Tsc2 and Nthl1 genes for tuberin an... 40 6.0
73emb|AL683893.26| Mouse DNA sequence from clone RP23-122N18 on ch... 40 6.0
74emb|AL590762.1|HSXDPA Homo sapiens chromosome X sequence from 6... 40 6.0 
>ref|XM_469008.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1567

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                 
Query: 400 gccgacaagatcgatctcaccagcctcgacatccagct 437
           |||||||||||||||||||||||||| || ||||||||
Sbjct: 91  gccgacaagatcgatctcaccagcctagatatccagct 128
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>gb|AC128646.5| Oryza sativa chromosome 3 BAC OSJNBb0029I19 genomic sequence, complete
              sequence
          Length = 120254

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                    
Query: 400    gccgacaagatcgatctcaccagcctcgacatccagct 437
              |||||||||||||||||||||||||| || ||||||||
Sbjct: 109756 gccgacaagatcgatctcaccagcctagatatccagct 109719
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 400      gccgacaagatcgatctcaccagcctcgacatccagct 437
                |||||||||||||||||||||||||| || ||||||||
Sbjct: 24364201 gccgacaagatcgatctcaccagcctagatatccagct 24364238
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>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
             sequence
          Length = 171664

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 400   gccgacaagatcgatctcaccagcctcgacatccagct 437
             |||||||||||||||||||||||||| || ||||||||
Sbjct: 16423 gccgacaagatcgatctcaccagcctagatatccagct 16386
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 400      gccgacaagatcgatctcaccagcctcgacatccagct 437
                |||||||||||||||||||||||||| || ||||||||
Sbjct: 24281670 gccgacaagatcgatctcaccagcctagatatccagct 24281707
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>gb|AY108753.1| Zea mays PCO090965 mRNA sequence
          Length = 1019

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 403 gacaagatcgatctcaccagcctcgacatccagctggag 441
           |||||||| ||||| || |||||||||||||||||||||
Sbjct: 693 gacaagattgatcttacgagcctcgacatccagctggag 731
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>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29
          Length = 308050

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 29     tcctcgccacctccgccgcctcgcccccgccc 60
              ||||||||||| || |||||||||||||||||
Sbjct: 214627 tcctcgccacccccaccgcctcgcccccgccc 214658
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>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete
             sequence
          Length = 149758

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 38    cctccgccgcctcgcccccgcc 59
             ||||||||||||||||||||||
Sbjct: 59195 cctccgccgcctcgcccccgcc 59216
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>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15,
             complete sequence
          Length = 144778

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 24    tcatctcctcgccacctccgccgcctcgcc 53
             ||||||||||||| ||||||||||| ||||
Sbjct: 37406 tcatctcctcgccccctccgccgccgcgcc 37435
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 24     tcatctcctcgccacctccgccgcctcgcc 53
              ||||||||||||| ||||||||||| ||||
Sbjct: 241586 tcatctcctcgccccctccgccgccgcgcc 241615



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 35       ccacctccgccgcctcgcccccgcc 59
                |||||||||||||||||||| ||||
Sbjct: 24505621 ccacctccgccgcctcgccctcgcc 24505597



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 41    ccgccgcctcgcccccgcccaacctccgccgcc 73
             |||||||||||||| ||||| | ||||||||||
Sbjct: 20365 ccgccgcctcgcccgcgccctagctccgccgcc 20397
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 38       cctccgccgcctcgcccccgcc 59
                ||||||||||||||||||||||
Sbjct: 16601047 cctccgccgcctcgcccccgcc 16601026



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 39       ctccgccgcctcgcccccgcccaa 62
                |||| |||||||||||||||||||
Sbjct: 13957840 ctcctccgcctcgcccccgcccaa 13957817
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 38      cctccgccgcctcgcccccgcc 59
               ||||||||||||||||||||||
Sbjct: 4452491 cctccgccgcctcgcccccgcc 4452470



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 24       tcatctcctcgccacctccgccgcc 48
                ||||||||||||| |||||||||||
Sbjct: 11777590 tcatctcctcgccccctccgccgcc 11777566



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 42       cgccgcctcgcccccgccca 61
                ||||||||||||||||||||
Sbjct: 22338695 cgccgcctcgcccccgccca 22338714



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 30      cctcgccacctccgccgcctcgcc 53
               ||||||| ||||||||||||||||
Sbjct: 3783782 cctcgcctcctccgccgcctcgcc 3783805
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>dbj|AP006157.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1077E10
          Length = 100821

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 38    cctccgccgcctcgcccccgcc 59
             ||||||||||||||||||||||
Sbjct: 24979 cctccgccgcctcgcccccgcc 24958
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>dbj|AK110629.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-B07, full
           insert sequence
          Length = 922

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 24  tcatctcctcgccacctccgccgcctcgcc 53
           ||||||||||||| ||||||||||| ||||
Sbjct: 580 tcatctcctcgccccctccgccgccgcgcc 609
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>dbj|AK102352.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091E11, full
           insert sequence
          Length = 1347

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 38  cctccgccgcctcgcccccgcc 59
           ||||||||||||||||||||||
Sbjct: 140 cctccgccgcctcgcccccgcc 161
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 38       cctccgccgcctcgcccccgcc 59
                ||||||||||||||||||||||
Sbjct: 16609288 cctccgccgcctcgcccccgcc 16609267



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 39       ctccgccgcctcgcccccgcccaa 62
                |||| |||||||||||||||||||
Sbjct: 13965182 ctcctccgcctcgcccccgcccaa 13965159
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>ref|XM_472987.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1098

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 35 ccacctccgccgcctcgcccccgcc 59
          |||||||||||||||||||| ||||
Sbjct: 38 ccacctccgccgcctcgccctcgcc 62
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>gb|AC108875.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_C08,
             complete sequence
          Length = 132017

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 41    ccgccgcctcgcccccgcccaacctccgccgcc 73
             |||||||||||||| ||||| ||| ||||||||
Sbjct: 97842 ccgccgcctcgcccgcgccctaccgccgccgcc 97810
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>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0084P24, complete sequence
          Length = 148784

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 41    ccgccgcctcgcccccgcccaacctccgccgcc 73
             |||||||||||||| ||||| ||| ||||||||
Sbjct: 47453 ccgccgcctcgcccgcgccctaccgccgccgcc 47421
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>gb|AC131999.9| Mus musculus chromosome 15, clone RP24-139E21, complete sequence
          Length = 214392

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 184   tttcccacccagcttcctccc 204
             |||||||||||||||||||||
Sbjct: 97463 tttcccacccagcttcctccc 97443
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>gb|AC122303.2| Mus musculus BAC clone RP23-279L13 from 6, complete sequence
          Length = 188201

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 46     gcctcgcccccgcccaacctccgccgccc 74
              ||||||||||| ||||||| |||||||||
Sbjct: 116574 gcctcgcccccccccaacccccgccgccc 116602
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>emb|BX842604.1|OSJN00294 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1160F02, complete
             sequence
          Length = 139971

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 41    ccgccgcctcgcccccgcccaacctccgccgcc 73
             |||||||||||||| ||||| | ||||||||||
Sbjct: 20365 ccgccgcctcgcccgcgccctagctccgccgcc 20397
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>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16,
             complete sequence
          Length = 146313

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 35    ccacctccgccgcctcgcccccgcc 59
             |||||||||||||||||||| ||||
Sbjct: 65252 ccacctccgccgcctcgccctcgcc 65228
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 33       cgccacctccgccgcctcgcc 53
                |||||||||||||||||||||
Sbjct: 24219729 cgccacctccgccgcctcgcc 24219709



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 29      tcctcgccacctccgccgcctcgcc 53
               |||||||| ||||||||||||||||
Sbjct: 1965617 tcctcgcctcctccgccgcctcgcc 1965593
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 41       ccgccgcctcgcccccgcccaacctccgccgcc 73
                |||||||||||||| ||||| ||| ||||||||
Sbjct: 20209181 ccgccgcctcgcccgcgccctaccgccgccgcc 20209149



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 25       catctcctcgccacctccgccgcc 48
                |||| |||||||||||||||||||
Sbjct: 22304244 catcccctcgccacctccgccgcc 22304267



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 25      catctcctcgccacctccgccgcc 48
               |||| |||||||||||||||||||
Sbjct: 5842500 catcccctcgccacctccgccgcc 5842523
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 164      ctggttcctcgcctcgccgtt 184
                |||||||||||||||||||||
Sbjct: 19778270 ctggttcctcgcctcgccgtt 19778250
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>gb|DQ022844.1| Oryza sativa (japonica cultivar-group) cytochrome P450 mRNA,
           complete cds
          Length = 1719

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 33  cgccacctccgccgcctcgcc 53
           |||||||||||||||||||||
Sbjct: 443 cgccacctccgccgcctcgcc 463
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 364     aggaccgggagcttggggagcagcg 388
               |||||||||||||||| ||||||||
Sbjct: 4557121 aggaccgggagcttggcgagcagcg 4557097
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>dbj|AP004156.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1112_G07
          Length = 149119

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 164   ctggttcctcgcctcgccgtt 184
             |||||||||||||||||||||
Sbjct: 86821 ctggttcctcgcctcgccgtt 86801
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>dbj|AP005798.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1136H02
          Length = 145086

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 164    ctggttcctcgcctcgccgtt 184
              |||||||||||||||||||||
Sbjct: 135028 ctggttcctcgcctcgccgtt 135008
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>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1506_A04
          Length = 114998

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 24    tcatctcctcgccacctccgccgcc 48
             ||||||||||||| |||||||||||
Sbjct: 20408 tcatctcctcgccccctccgccgcc 20384
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>dbj|AK121238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096A02, full
           insert sequence
          Length = 1698

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 33  cgccacctccgccgcctcgcc 53
           |||||||||||||||||||||
Sbjct: 437 cgccacctccgccgcctcgcc 457
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>dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C11,
          full insert sequence
          Length = 2822

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 35 ccacctccgccgcctcgcccccgcc 59
          |||||||||||||||||||| ||||
Sbjct: 45 ccacctccgccgcctcgccctcgcc 69
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>dbj|AK104854.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B10, full
           insert sequence
          Length = 1353

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 35  ccacctccgccgcctcgcccccgcc 59
           |||||||||||||||||||| ||||
Sbjct: 121 ccacctccgccgcctcgccctcgcc 145
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>dbj|AK066522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072G15, full
           insert sequence
          Length = 1373

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 35  ccacctccgccgcctcgcccccgcc 59
           |||||||||||||||||||| ||||
Sbjct: 121 ccacctccgccgcctcgccctcgcc 145
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 408     gatcgatctcaccagcctcga 428
               |||||||||||||||||||||
Sbjct: 4462364 gatcgatctcaccagcctcga 4462344
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>gb|AF128442.1|AF128442 Lolium perenne pollen allergen Lol p VA precursor, mRNA, complete
           cds
          Length = 1229

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 28  ctcctcgccacctccgccgcc 48
           |||||||||||||||||||||
Sbjct: 328 ctcctcgccacctccgccgcc 348
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 33       cgccacctccgccgcctcgcc 53
                |||||||||||||||||||||
Sbjct: 24147935 cgccacctccgccgcctcgcc 24147915



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 29      tcctcgccacctccgccgcctcgcc 53
               |||||||| ||||||||||||||||
Sbjct: 1965568 tcctcgcctcctccgccgcctcgcc 1965544
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>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 132733

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 33     cgccacctccgccgcctcgcc 53
              |||||||||||||||||||||
Sbjct: 104420 cgccacctccgccgcctcgcc 104400
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>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20,
             complete sequence
          Length = 116983

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 35    ccacctccgccgcctcgcccccgcc 59
             |||||||||||||||||||| ||||
Sbjct: 98943 ccacctccgccgcctcgccctcgcc 98919
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>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 107247

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 29   tcctcgccacctccgccgcctcgcc 53
            |||||||| ||||||||||||||||
Sbjct: 2604 tcctcgcctcctccgccgcctcgcc 2628
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>emb|AL929556.14| Mouse DNA sequence from clone RP23-353B17 on chromosome 2, complete
              sequence
          Length = 192715

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 184    tttcccacccagcttcctccc 204
              |||||||||||||||||||||
Sbjct: 102051 tttcccacccagcttcctccc 102031
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>ref|XM_476087.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 909

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 25  catctcctcgccacctccgccgcc 48
           |||| |||||||||||||||||||
Sbjct: 742 catcccctcgccacctccgccgcc 719
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>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07,
             complete sequence
          Length = 114135

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 25    catctcctcgccacctccgccgcc 48
             |||| |||||||||||||||||||
Sbjct: 49264 catcccctcgccacctccgccgcc 49287
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>ref|XM_476932.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1164

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 30 cctcgccacctccgccgcct 49
          ||||||||||||||||||||
Sbjct: 25 cctcgccacctccgccgcct 6
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>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC
              nbxb0045B21, complete sequence
          Length = 152397

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 39     ctccgccgcctcgcccccgcccaa 62
              |||| |||||||||||||||||||
Sbjct: 126466 ctcctccgcctcgcccccgcccaa 126443
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>gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosome 17, complete sequence
          Length = 204306

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 413    atctcaccagcctcgacatccagc 436
              |||||||||||||||| |||||||
Sbjct: 131792 atctcaccagcctcgagatccagc 131815
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>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02,
            complete sequence
          Length = 131860

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 25   catctcctcgccacctccgccgcc 48
            |||| |||||||||||||||||||
Sbjct: 5879 catcccctcgccacctccgccgcc 5902
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>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 231     gccttttccagcgagttccgtccc 254
               |||| |||||||||||||||||||
Sbjct: 2072683 gcctgttccagcgagttccgtccc 2072660
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>gb|AF142884.1| Uncultured archaeon DEEP-10 16S ribosomal RNA gene, partial
           sequence
          Length = 986

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 413 atctcaccagcctcgacatc 432
           ||||||||||||||||||||
Sbjct: 466 atctcaccagcctcgacatc 485
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>gb|AC132367.3| Mus musculus BAC clone RP23-465K21 from chromosome 17, complete
             sequence
          Length = 192971

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 413   atctcaccagcctcgacatccagc 436
             |||||||||||||||| |||||||
Sbjct: 13156 atctcaccagcctcgagatccagc 13179
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>emb|AL360269.21| Human DNA sequence from clone RP11-192I3 on chromosome 1 Contains the
             WNT9A gene for wingless-type MMTV integration site family,
             member 9A and a CpG island, complete sequence
          Length = 141703

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 186   tcccacccagcttcctcccgcccc 209
             ||||||||||| ||||||||||||
Sbjct: 71461 tcccacccagcctcctcccgcccc 71438
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>emb|AL359710.15| Human DNA sequence from clone RP11-30L7 on chromosome 9 Contains part of
              a novel gene, the 5' end of the NR4A3 gene for nuclear
              receptor subfamily 4 group A, member 3 and two CpG islands,
              complete sequence
          Length = 174140

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     gcccccgcccaacctccgcc 70
              ||||||||||||||||||||
Sbjct: 157896 gcccccgcccaacctccgcc 157915
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>emb|BX546480.9| Zebrafish DNA sequence from clone DKEY-175C11, complete sequence
          Length = 203056

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 343    ctgcctgaggtgaaattcaa 362
              ||||||||||||||||||||
Sbjct: 184817 ctgcctgaggtgaaattcaa 184836
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 216     agcttgcggcggccggcctt 235
               ||||||||||||||||||||
Sbjct: 3161412 agcttgcggcggccggcctt 3161393
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 30      cctcgccacctccgccgcct 49
               ||||||||||||||||||||
Sbjct: 4714867 cctcgccacctccgccgcct 4714848
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 29      tcctcgccacctccgccgcctcgcccccgccc 60
               |||| |||||| || |||||||||||||||||
Sbjct: 3159547 tcctggccacccccaccgcctcgcccccgccc 3159516
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 216     agcttgcggcggccggcctt 235
               ||||||||||||||||||||
Sbjct: 2158313 agcttgcggcggccggcctt 2158294
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>dbj|AP005558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1155_H10
          Length = 140475

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     cgccgcctcgcccccgccca 61
              ||||||||||||||||||||
Sbjct: 100703 cgccgcctcgcccccgccca 100722
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>dbj|AP005905.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:B1080A02
          Length = 151360

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 30    cctcgccacctccgccgcctcgcc 53
             ||||||| ||||||||||||||||
Sbjct: 23298 cctcgcctcctccgccgcctcgcc 23321
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>dbj|AP005179.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0084L07
          Length = 127992

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    cctcgccacctccgccgcct 49
             ||||||||||||||||||||
Sbjct: 32777 cctcgccacctccgccgcct 32758
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>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1116_H10
          Length = 101054

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 30    cctcgccacctccgccgcctcgcc 53
             ||||||| ||||||||||||||||
Sbjct: 91084 cctcgcctcctccgccgcctcgcc 91107
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>dbj|AK111777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077D02, full
           insert sequence
          Length = 1779

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  cctcgccacctccgccgcct 49
           ||||||||||||||||||||
Sbjct: 237 cctcgccacctccgccgcct 218
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>dbj|AK110966.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-B06, full
            insert sequence
          Length = 2040

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 25   catctcctcgccacctccgccgcc 48
            |||| |||||||||||||||||||
Sbjct: 1263 catcccctcgccacctccgccgcc 1286
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>emb|AJ327848.1|HSA327848 Homo sapiens genomic sequence surrounding NotI site, clone NR1-DF4R
          Length = 824

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 51  gcccccgcccaacctccgcc 70
           ||||||||||||||||||||
Sbjct: 227 gcccccgcccaacctccgcc 208
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>gb|AC154828.2| Mus musculus BAC clone RP24-549A19 from 13, complete sequence
          Length = 138426

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   cgccgcgttcctcaagactt 299
             ||||||||||||||||||||
Sbjct: 88505 cgccgcgttcctcaagactt 88524
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>emb|AL590764.3|HS1091N2 Homo sapiens chromosome X from PAC 1091N2, region GJB1-DXS559 map Xq13.1,
              complete sequence
          Length = 201197

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     ccacctccgccgcctcgccc 54
              ||||||||||||||||||||
Sbjct: 188113 ccacctccgccgcctcgccc 188132
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>emb|CR318592.7| Zebrafish DNA sequence from clone CH211-51F17 in linkage group 19,
             complete sequence
          Length = 124310

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    gtttagttattttgttggtt 106
             ||||||||||||||||||||
Sbjct: 32635 gtttagttattttgttggtt 32616
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>dbj|AP004384.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0506C07
          Length = 123451

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     cctcgccacctccgccgcct 49
              ||||||||||||||||||||
Sbjct: 122240 cctcgccacctccgccgcct 122221
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>dbj|AP001024.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-832N8, complete
             sequence
          Length = 183444

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   tttcccacccagcttcctcc 203
             ||||||||||||||||||||
Sbjct: 21930 tttcccacccagcttcctcc 21911
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>dbj|AP002353.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2651C21, complete
              sequence
          Length = 202607

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    tttcccacccagcttcctcc 203
              ||||||||||||||||||||
Sbjct: 111773 tttcccacccagcttcctcc 111754
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>dbj|AB009371.1| Mus musculus Tsc2 and Nthl1 genes for tuberin and homlogue of
            endonuclease III, complete cds
          Length = 11919

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 413  atctcaccagcctcgacatccagc 436
            |||||||||||||||| |||||||
Sbjct: 4442 atctcaccagcctcgagatccagc 4419
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>emb|AL683893.26| Mouse DNA sequence from clone RP23-122N18 on chromosome 4, complete
             sequence
          Length = 204841

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 51    gcccccgcccaacctccgcc 70
             ||||||||||||||||||||
Sbjct: 65511 gcccccgcccaacctccgcc 65530
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>emb|AL590762.1|HSXDPA Homo sapiens chromosome X  sequence from 6 PACs 1 BAC and 1 cosmid,
             region GJB1-DXS559 map Xq13.1; segment 1/2, complete
             sequence
          Length = 305000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    ccacctccgccgcctcgccc 54
             ||||||||||||||||||||
Sbjct: 23923 ccacctccgccgcctcgccc 23942


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,834,682
Number of Sequences: 3902068
Number of extensions: 3834682
Number of successful extensions: 71951
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70359
Number of HSP's gapped (non-prelim): 1592
length of query: 446
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 424
effective length of database: 17,147,199,772
effective search space: 7270412703328
effective search space used: 7270412703328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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