>YULF_BACSU (O05265) Hypothetical oxidoreductase yulF (EC 1.-.-.-)|
          Length = 328

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 26/70 (37%), Positives = 41/70 (58%)
 Frame = +1

Query: 379 FSDHRELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVIEA 558
           FSD +E+  S   DAV ++SPN  H E  +  + + K  HVL EKP  +  ++ E++I A
Sbjct: 52  FSDLQEMAASDCFDAVYIASPNALHKEQAVLFMNHGK--HVLCEKPFASNTKETEEMISA 109

Query: 559 AKQRPDILVQ 588
           AK    +L++
Sbjct: 110 AKANGVVLME 119

>Y1686_STRPN (Q54728) Hypothetical oxidoreductase SP1686 (EC 1.-.-.-)|
          Length = 367

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 23/67 (34%), Positives = 38/67 (56%)
 Frame = +1

Query: 367 GFKTFSDHRELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEK 546
           G K  S   EL+ S   D V+V++PN  H E ++    + K  +V  EKP+  + QDC +
Sbjct: 45  GAKVASSLDELVSSDEVDCVIVATPNNLHKEPVIKAAQHGK--NVFCEKPIALSYQDCRE 102

Query: 547 VIEAAKQ 567
           +++A K+
Sbjct: 103 MVDACKE 109

>GFO_ZYMMO (Q07982) Glucose--fructose oxidoreductase precursor (EC 1.1.99.28)|
           (GFOR)
          Length = 433

 Score = 44.3 bits (103), Expect = 3e-04
 Identities = 22/62 (35%), Positives = 36/62 (58%)
 Frame = +1

Query: 379 FSDHRELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVIEA 558
           +S+  ++      DAV +  PN  H+E  +      K  HV+ EKP+ T+V DC+++I+A
Sbjct: 139 YSNFDKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGK--HVMCEKPMATSVADCQRMIDA 196

Query: 559 AK 564
           AK
Sbjct: 197 AK 198

>YJHC_ECOLI (P39353) Hypothetical oxidoreductase yjhC (EC 1.-.-.-)|
          Length = 372

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 20/57 (35%), Positives = 33/57 (57%)
 Frame = +1

Query: 397 LLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVIEAAKQ 567
           L+ S L D V+V++PN  H E ++      K  HV  EKP+  + +DC  +++A K+
Sbjct: 55  LVSSKLVDCVIVATPNYLHKEPVIKAAKNKK--HVFCEKPIALSYEDCVDMVKACKE 109

>NTDC_BACSU (O07564) NTD biosynthesis operon putative oxidoreductase ntdC (EC|
           1.-.-.-)
          Length = 350

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 21/67 (31%), Positives = 40/67 (59%)
 Frame = +1

Query: 367 GFKTFSDHRELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEK 546
           G K+F +  EL+D+   + ++V+SPN  H E  +  +G  K  HVL EKP+  ++++   
Sbjct: 47  GGKSFENVDELIDAS--EGLIVASPNFCHKEHALQALG--KHKHVLCEKPMAISLEEASI 102

Query: 547 VIEAAKQ 567
           + + A++
Sbjct: 103 MKDTAER 109

>YRBE_BACSU (O05389) Hypothetical oxidoreductase yrbE (EC 1.-.-.-)|
          Length = 341

 Score = 37.7 bits (86), Expect = 0.025
 Identities = 20/71 (28%), Positives = 40/71 (56%)
 Frame = +1

Query: 382 SDHRELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVIEAA 561
           SD+R+LL     DA+ + SP   H++++ +     K  H+  EKP+  ++ +  + + AA
Sbjct: 56  SDYRDLLHDPDIDAIFICSPTAVHAQMIKEAAEAKK--HIFCEKPVSFSLDETSEAL-AA 112

Query: 562 KQRPDILVQVG 594
            ++  + +QVG
Sbjct: 113 VRKHGVTLQVG 123

>MI2D_BACSU (P26935) Inositol 2-dehydrogenase (EC 1.1.1.18)|
          Length = 344

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 22/59 (37%), Positives = 32/59 (54%)
 Frame = +1

Query: 418 DAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVIEAAKQRPDILVQVG 594
           DAV+V+S    H   ++  I   K  +V  EKPL TT + C +++E   +    LVQVG
Sbjct: 68  DAVLVTSWGPAHESSVLKAIKAQK--YVFCEKPLATTAEGCMRIVEEEIKVGKRLVQVG 124

>PHT4_PSEPU (Q05184) Putative 4,5,-dihydroxyphthalate dehydrogenase (EC|
           1.-.-.-) (DHP dehydrogenase)
          Length = 410

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 17/45 (37%), Positives = 29/45 (64%)
 Frame = +1

Query: 418 DAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVI 552
           DA+ ++SP+  H+E     I  A   HVLVEKP+  ++ +C+++I
Sbjct: 74  DALYIASPHQFHAEHTR--IAAANRKHVLVEKPMALSLDECDRMI 116

>YBQ3_SCHPO (O42896) Hypothetical oxidoreductase C115.03 (EC 1.-.-.-)|
          Length = 368

 Score = 36.2 bits (82), Expect = 0.073
 Identities = 22/63 (34%), Positives = 34/63 (53%)
 Frame = +1

Query: 394 ELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVIEAAKQRP 573
           ELL     + VVVS P   HSEI+   +   K  HV+ EKP   T ++ +++ E A+ + 
Sbjct: 62  ELLADVNIELVVVSLPPNVHSEIVKKALNAGK--HVVCEKPFTPTYEEAKELYELAESKS 119

Query: 574 DIL 582
            +L
Sbjct: 120 LLL 122

>YISS_BACSU (P40332) Hypothetical oxidoreductase yisS (EC 1.-.-.-)|
          Length = 342

 Score = 36.2 bits (82), Expect = 0.073
 Identities = 21/74 (28%), Positives = 39/74 (52%)
 Frame = +1

Query: 373 KTFSDHRELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVI 552
           K   D  E+L+    DAV++ +P  TH ++++      K   + VEKPL  ++++ +   
Sbjct: 54  KWSEDPYEVLEDPGIDAVIIVTPTSTHGDMIIKAAENGK--QIFVEKPLTLSLEESKAAS 111

Query: 553 EAAKQRPDILVQVG 594
           E  K+   ++ QVG
Sbjct: 112 EKVKE-TGVICQVG 124

>Y4967_ARATH (Q9SZ83) Probable oxidoreductase At4g09670 (EC 1.-.-.-)|
          Length = 362

 Score = 35.8 bits (81), Expect = 0.096
 Identities = 22/75 (29%), Positives = 35/75 (46%)
 Frame = +1

Query: 340 FVTKS*ELEGFKTFSDHRELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPL 519
           F T +   E  K    +  LL+    DA+ V  P   H E    I    K  H+L+EKP+
Sbjct: 47  FATANNYPESTKIHGSYESLLEDPEIDALYVPLPTSLHVE--WAIKAAEKGKHILLEKPV 104

Query: 520 CTTVQDCEKVIEAAK 564
              V + +K+++A +
Sbjct: 105 AMNVTEFDKIVDACE 119

>YEG9_SCHPO (O13991) Hypothetical oxidoreductase C26H5.09c (EC 1.-.-.-)|
          Length = 369

 Score = 35.8 bits (81), Expect = 0.096
 Identities = 20/66 (30%), Positives = 33/66 (50%)
 Frame = +1

Query: 373 KTFSDHRELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVI 552
           K ++   ELL     + VV+S P   H E++   +   K  HVL EKP   T  + +++ 
Sbjct: 55  KVYTKLDELLADSNIELVVISLPPNVHYEVVSQALNAGK--HVLCEKPFTPTYGEAKELF 112

Query: 553 EAAKQR 570
           + AK +
Sbjct: 113 DLAKSK 118

>Y816_SYNY3 (P74041) Hypothetical oxidoreductase sll0816 (EC 1.-.-.-)|
          Length = 371

 Score = 35.8 bits (81), Expect = 0.096
 Identities = 21/65 (32%), Positives = 36/65 (55%)
 Frame = +1

Query: 376 TFSDHRELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVIE 555
           ++++  ELL +    AV ++SP   H E+    I   K  HVL+EKP+   V++  ++  
Sbjct: 56  SYNNLEELLANPEVQAVTIASPPFLHYEMAKQAILAGK--HVLLEKPMTLRVEETIELYH 113

Query: 556 AAKQR 570
            A+QR
Sbjct: 114 LARQR 118

>YVAA_BACSU (O32223) Hypothetical oxidoreductase yvaA (EC 1.-.-.-)|
          Length = 358

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 19/63 (30%), Positives = 35/63 (55%)
 Frame = +1

Query: 394 ELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVIEAAKQRP 573
           E+ +    + V+V++P+  H E  M  I   K  HV++EKP+  T ++ E +  AA ++ 
Sbjct: 67  EITNDPAIELVIVTTPSGLHYEHTMACIQAGK--HVVMEKPMTATAEEGETLKRAADEKG 124

Query: 574 DIL 582
            +L
Sbjct: 125 VLL 127

>Y4HM_RHISN (P55480) Hypothetical protein y4hM precursor|
          Length = 403

 Score = 33.1 bits (74), Expect = 0.62
 Identities = 19/86 (22%), Positives = 39/86 (45%)
 Frame = +1

Query: 328 ASFWFVTKS*ELEGFKTFSDHRELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLV 507
           A+ W +        +   +      D G+ +AV + +PN TH  I    +       V++
Sbjct: 63  AAEWMIAPDRSYSDWNAMATAEAARDDGI-EAVSIVTPNWTHHRIATAFLKAGID--VIL 119

Query: 508 EKPLCTTVQDCEKVIEAAKQRPDILV 585
           +KP+ TTV D  +++E  +    +++
Sbjct: 120 DKPMTTTVSDARELVELQRATDRLVI 145

>YDGJ_ECOLI (P77376) Hypothetical oxidoreductase ydgJ (EC 1.-.-.-)|
          Length = 346

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 18/67 (26%), Positives = 32/67 (47%)
 Frame = +1

Query: 382 SDHRELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVIEAA 561
           S+ + L +    D +V+ +PN TH  +    +   K  HV+V+KP   T+    ++   A
Sbjct: 54  SEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGK--HVVVDKPFTVTLSQARELDALA 111

Query: 562 KQRPDIL 582
           K    +L
Sbjct: 112 KSLGRVL 118

>CBAC_COMTE (Q44258) 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene|
           dehydrogenase (EC 1.-.-.-)
          Length = 397

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 16/56 (28%), Positives = 30/56 (53%)
 Frame = +1

Query: 418 DAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVIEAAKQRPDILV 585
           + V + +P+  H+      +   K  HVLVEKP+  T++DC ++   A++    L+
Sbjct: 64  EVVYIGTPHQFHAVHAEIALNAGK--HVLVEKPMAVTLEDCCRMNACAQRAGKYLI 117

>YGJR_ECOLI (P42599) Hypothetical oxidoreductase ygjR (EC 1.-.-.-)|
          Length = 328

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/70 (24%), Positives = 34/70 (48%)
 Frame = +1

Query: 379 FSDHRELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVIEA 558
           F+    + +S   DAV ++SPN  H       + +    +V+ EKPL + + + +  I  
Sbjct: 52  FTSLEAMAESDAIDAVYIASPNSLHFSQTQLFLSH--KINVICEKPLASNLAEVDAAIAC 109

Query: 559 AKQRPDILVQ 588
           A++   +L +
Sbjct: 110 ARENQVVLFE 119

>GAL_PSEFL (P11886) Galactose 1-dehydrogenase (EC 1.1.1.48)|
          Length = 304

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = +1

Query: 367 GFKTFSDHRELLDSGL-CDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTV 531
           G + F    ELL++G   DA+   +P      ++   +   K  HVLVEKP C T+
Sbjct: 43  GVENFQSLGELLENGPPVDAIAFCTPPQGRFALVQQALAAGK--HVLVEKPPCATL 96

>LDB2_MOUSE (O55203) LIM domain-binding protein 2 (Carboxyl-terminal LIM|
           domain-binding protein 1) (CLIM-1) (LIM-domain-binding
           factor CLIM1)
          Length = 373

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -3

Query: 510 LNKNVVRLGITNDVHEYLRVC 448
           L+KN+ R+G+TN    YLR+C
Sbjct: 187 LSKNITRMGLTNFTLNYLRLC 207

>LDB2_HUMAN (O43679) LIM domain-binding protein 2 (Carboxyl-terminal LIM|
           domain-binding protein 1) (CLIM-1) (LIM domain-binding
           factor CLIM1)
          Length = 373

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -3

Query: 510 LNKNVVRLGITNDVHEYLRVC 448
           L+KN+ R+G+TN    YLR+C
Sbjct: 187 LSKNITRMGLTNFTLNYLRLC 207

>XERC_OCEIH (Q7ZAM5) Tyrosine recombinase xerC|
          Length = 305

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = -3

Query: 531 NRGAQRLLNKNVVRLGITNDVHEYLRVCHVWRRH--NNGVTESAVQQL 394
           NRG + +LNK V R  +T  VH + ++ H +  H  N G    +VQ+L
Sbjct: 223 NRGIRTILNKIVERASLTVHVHPH-KLRHTFATHLLNEGADLRSVQEL 269

>YMO1_RHIME (P49305) Hypothetical 36.4 kDa protein in mocC-mocA intergenic|
           region (ORF334)
          Length = 334

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/61 (27%), Positives = 30/61 (49%)
 Frame = +1

Query: 373 KTFSDHRELLDSGLCDAVVVSSPNMTHSEILMDIIGYAKPHHVLVEKPLCTTVQDCEKVI 552
           +++  + E+L     +AV +  PN  H    +      K  HVL EKPL   V++  ++I
Sbjct: 53  RSYGSYDEILADPEIEAVYIPLPNHLHVHWAIRAAEAGK--HVLCEKPLALDVEELSRLI 110

Query: 553 E 555
           +
Sbjct: 111 D 111


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,617,338
Number of Sequences: 219361
Number of extensions: 1631564
Number of successful extensions: 4403
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4397
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)