ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal40f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197897.1| Oryza sativa (japonica cultivar-group) putative... 274 2e-70
2dbj|AK065123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 274 2e-70
3gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 geno... 161 2e-36
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 161 2e-36
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 161 2e-36
6gb|AF251795.1|AF251795 Elaeis guineensis glycerol-3-phosphate ac... 90 6e-15
7emb|Z49091.1|SPACT1MR S.oleracea act1 mRNA for glycerol-3-phosph... 54 3e-04
8emb|X77370.1|SOGAT S.oleracea GAT mRNA for glycerol-3-phosphate ... 54 3e-04
9ref|XM_517982.1| PREDICTED: Pan troglodytes similar to protocadh... 46 0.083
10gb|AC005609.1| Homo sapiens chromosome 5, BAC clone 203o13 (LBNL... 46 0.083
11ref|NG_000016.1| Homo sapiens protocadherin alpha cluster (PCDHA... 46 0.083
12ref|NM_031501.1| Homo sapiens protocadherin alpha 5 (PCDHA5), tr... 46 0.083
13ref|NM_018908.2| Homo sapiens protocadherin alpha 5 (PCDHA5), tr... 46 0.083
14gb|BC033735.1| Homo sapiens protocadherin alpha 5, mRNA (cDNA cl... 46 0.083
15emb|CR860451.1| Pongo pygmaeus mRNA; cDNA DKFZp459H021 (from clo... 46 0.083
16dbj|AB176649.1| Macaca fuscata CNRv05 mRNA for Protocadherin alp... 46 0.083
17gb|AC008468.6|AC008468 Homo sapiens chromosome 5 clone CTC-365B8... 46 0.083
18gb|AF152313.1|AF152313 Homo sapiens protocadherin alpha 5 (PCDH-... 46 0.083
19gb|AF152483.1|AF152483 Homo sapiens protocadherin alpha 5 short ... 46 0.083
20emb|AL034548.25|HS1103G7 Human DNA sequence from clone RP5-1103G... 42 1.3
21emb|CR387999.7| Opossum DNA sequence from clone XX-158F12, compl... 42 1.3
22dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 42 1.3
23emb|AL513302.15| Human DNA sequence from clone RP11-226L15 on ch... 40 5.1
24gb|BC034036.1| Homo sapiens potassium inwardly-rectifying channe... 40 5.1
25gb|AC116419.32| Mus musculus chromosome 1, clone RP24-89C10, com... 40 5.1
26gb|AF482710.1|AF482709S2 Homo sapiens potassium inwardly-rectify... 40 5.1
27gb|AC079070.6| Homo sapiens chromosome 18, clone RP11-126K15, co... 40 5.1
28gb|AC083829.5| Homo sapiens BAC clone RP11-466G12 from 4, comple... 40 5.1
29gb|AC090284.6| Homo sapiens chromosome 11, clone RP11-348B14, co... 40 5.1
30gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D20, co... 40 5.1
31dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
32dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
33ref|NM_002241.3| Homo sapiens potassium inwardly-rectifying chan... 40 5.1
34emb|CR846100.11| Zebrafish DNA sequence from clone DKEYP-94B4, c... 40 5.1
35gb|U73192.1|HSU73192 Human inward rectifier potassium channel Ki... 40 5.1
36emb|CT009569.17| Pig DNA sequence from clone CH242-213C10 on chr... 40 5.1
37emb|AL928545.6| Mouse DNA sequence from clone RP23-218A13 on chr... 40 5.1
38dbj|AP005122.2| Homo sapiens genomic DNA, chromosome 11, clone:R... 40 5.1 
>ref|NM_197897.1| Oryza sativa (japonica cultivar-group) putative acyltransferase
            (OSJNBa0035H01.8), mRNA
          Length = 1284

 Score =  274 bits (138), Expect = 2e-70
 Identities = 180/194 (92%)
 Strand = Plus / Plus

                                                                        
Query: 12   ccatttgatgcatctgcagtggataatatgaggaggcttctggagcattctggcgttcct 71
            ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||
Sbjct: 919  ccatttgatgcatctgcagtggacaacatgaggaggcttctggagcattctggtgttcct 978

                                                                        
Query: 72   gggcacatatatccattatcattgctatgctatgagattatgcctccaccacaacagatt 131
            ||||||||||||||| | ||| |||| ||||||||| ||||||||||||||||  || ||
Sbjct: 979  gggcacatatatccactctcactgctctgctatgaggttatgcctccaccacagaaggtt 1038

                                                                        
Query: 132  gagaaagagattggtgagcaaagggtgatatccttccatggtgtaggcttgtcagtagct 191
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 1039 gagaaagagattggtgagcaaagggttatatccttccatggtgtaggcttgtcagtaact 1098

                          
Query: 192  gaagaaataaagta 205
            ||||| ||||||||
Sbjct: 1099 gaagagataaagta 1112



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 100/119 (84%)
 Strand = Plus / Plus

                                                                        
Query: 255  ttctcagaggctctgtacagttcagttgttgatcaatataatgtcctcaagtctgctatc 314
            ||||||||| |  ||||||  ||||| |||||||| |||||||  ||||| |||||||||
Sbjct: 1162 ttctcagagtcattgtacaactcagtcgttgatcagtataatgcgctcaaatctgctatc 1221

                                                                       
Query: 315  tttagagaccgtggagcagtttcgtcgaaccctgccatctcactctcgcaaccatggcg 373
            |||||||  || ||||||| ||| ||| ||  ||||||||||||||| |||||||||||
Sbjct: 1222 tttagaggtcgaggagcagattcatcggacagtgccatctcactctcacaaccatggcg 1280
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>dbj|AK065123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P02, full
            insert sequence
          Length = 2018

 Score =  274 bits (138), Expect = 2e-70
 Identities = 180/194 (92%)
 Strand = Plus / Plus

                                                                        
Query: 12   ccatttgatgcatctgcagtggataatatgaggaggcttctggagcattctggcgttcct 71
            ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||
Sbjct: 1058 ccatttgatgcatctgcagtggacaacatgaggaggcttctggagcattctggtgttcct 1117

                                                                        
Query: 72   gggcacatatatccattatcattgctatgctatgagattatgcctccaccacaacagatt 131
            ||||||||||||||| | ||| |||| ||||||||| ||||||||||||||||  || ||
Sbjct: 1118 gggcacatatatccactctcactgctctgctatgaggttatgcctccaccacagaaggtt 1177

                                                                        
Query: 132  gagaaagagattggtgagcaaagggtgatatccttccatggtgtaggcttgtcagtagct 191
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 1178 gagaaagagattggtgagcaaagggttatatccttccatggtgtaggcttgtcagtaact 1237

                          
Query: 192  gaagaaataaagta 205
            ||||| ||||||||
Sbjct: 1238 gaagagataaagta 1251



 Score =  101 bits (51), Expect = 2e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                        
Query: 255  ttctcagaggctctgtacagttcagttgttgatcaatataatgtcctcaagtctgctatc 314
            ||||||||| |  ||||||  ||||| |||||||| |||||||  |||||||||||||||
Sbjct: 1301 ttctcagagtcattgtacaactcagtcgttgatcagtataatgcgctcaagtctgctatc 1360

                                                                        
Query: 315  tttagagaccgtggagcagtttcgtcgaaccctgccatctcactctcgcaaccatggcgg 374
            |||||||  || ||||||| ||| ||| ||  ||||||||||||||| ||||||||||| 
Sbjct: 1361 tttagaggtcgaggagcagattcatcggacagtgccatctcactctcacaaccatggcga 1420

                   
Query: 375  tgaaact 381
            |||||||
Sbjct: 1421 tgaaact 1427
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>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete
             sequence
          Length = 64582

 Score =  161 bits (81), Expect = 2e-36
 Identities = 105/113 (92%)
 Strand = Plus / Plus

                                                                         
Query: 12    ccatttgatgcatctgcagtggataatatgaggaggcttctggagcattctggcgttcct 71
             ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||
Sbjct: 43390 ccatttgatgcatctgcagtggacaacatgaggaggcttctggagcattctggtgttcct 43449

                                                                  
Query: 72    gggcacatatatccattatcattgctatgctatgagattatgcctccaccaca 124
             ||||||||||||||| | ||| |||| ||||||||| ||||||||||||||||
Sbjct: 43450 gggcacatatatccactctcactgctctgctatgaggttatgcctccaccaca 43502



 Score =  127 bits (64), Expect = 3e-26
 Identities = 73/76 (96%)
 Strand = Plus / Plus

                                                                         
Query: 130   ttgagaaagagattggtgagcaaagggtgatatccttccatggtgtaggcttgtcagtag 189
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| 
Sbjct: 43588 ttgagaaagagattggtgagcaaagggttatatccttccatggtgtaggcttgtcagtaa 43647

                             
Query: 190   ctgaagaaataaagta 205
             ||||||| ||||||||
Sbjct: 43648 ctgaagagataaagta 43663



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 107/127 (84%)
 Strand = Plus / Plus

                                                                         
Query: 255   ttctcagaggctctgtacagttcagttgttgatcaatataatgtcctcaagtctgctatc 314
             ||||||||| |  ||||||  ||||| |||||||| |||||||  ||||| |||||||||
Sbjct: 44479 ttctcagagtcattgtacaactcagtcgttgatcagtataatgcgctcaaatctgctatc 44538

                                                                         
Query: 315   tttagagaccgtggagcagtttcgtcgaaccctgccatctcactctcgcaaccatggcgg 374
             |||||||  || ||||||| ||| ||| ||  ||||||||||||||| ||||||||||| 
Sbjct: 44539 tttagaggtcgaggagcagattcatcggacagtgccatctcactctcacaaccatggcga 44598

                    
Query: 375   tgaaact 381
             |||||||
Sbjct: 44599 tgaaact 44605
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  161 bits (81), Expect = 2e-36
 Identities = 105/113 (92%)
 Strand = Plus / Plus

                                                                            
Query: 12       ccatttgatgcatctgcagtggataatatgaggaggcttctggagcattctggcgttcct 71
                ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||
Sbjct: 22527672 ccatttgatgcatctgcagtggacaacatgaggaggcttctggagcattctggtgttcct 22527731

                                                                     
Query: 72       gggcacatatatccattatcattgctatgctatgagattatgcctccaccaca 124
                ||||||||||||||| | ||| |||| ||||||||| ||||||||||||||||
Sbjct: 22527732 gggcacatatatccactctcactgctctgctatgaggttatgcctccaccaca 22527784



 Score =  127 bits (64), Expect = 3e-26
 Identities = 73/76 (96%)
 Strand = Plus / Plus

                                                                            
Query: 130      ttgagaaagagattggtgagcaaagggtgatatccttccatggtgtaggcttgtcagtag 189
                |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| 
Sbjct: 22527870 ttgagaaagagattggtgagcaaagggttatatccttccatggtgtaggcttgtcagtaa 22527929

                                
Query: 190      ctgaagaaataaagta 205
                ||||||| ||||||||
Sbjct: 22527930 ctgaagagataaagta 22527945



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 107/127 (84%)
 Strand = Plus / Plus

                                                                            
Query: 255      ttctcagaggctctgtacagttcagttgttgatcaatataatgtcctcaagtctgctatc 314
                ||||||||| |  ||||||  ||||| |||||||| |||||||  ||||| |||||||||
Sbjct: 22528761 ttctcagagtcattgtacaactcagtcgttgatcagtataatgcgctcaaatctgctatc 22528820

                                                                            
Query: 315      tttagagaccgtggagcagtttcgtcgaaccctgccatctcactctcgcaaccatggcgg 374
                |||||||  || ||||||| ||| ||| ||  ||||||||||||||| ||||||||||| 
Sbjct: 22528821 tttagaggtcgaggagcagattcatcggacagtgccatctcactctcacaaccatggcga 22528880

                       
Query: 375      tgaaact 381
                |||||||
Sbjct: 22528881 tgaaact 22528887
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  161 bits (81), Expect = 2e-36
 Identities = 105/113 (92%)
 Strand = Plus / Plus

                                                                            
Query: 12       ccatttgatgcatctgcagtggataatatgaggaggcttctggagcattctggcgttcct 71
                ||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||
Sbjct: 22540140 ccatttgatgcatctgcagtggacaacatgaggaggcttctggagcattctggtgttcct 22540199

                                                                     
Query: 72       gggcacatatatccattatcattgctatgctatgagattatgcctccaccaca 124
                ||||||||||||||| | ||| |||| ||||||||| ||||||||||||||||
Sbjct: 22540200 gggcacatatatccactctcactgctctgctatgaggttatgcctccaccaca 22540252



 Score =  127 bits (64), Expect = 3e-26
 Identities = 73/76 (96%)
 Strand = Plus / Plus

                                                                            
Query: 130      ttgagaaagagattggtgagcaaagggtgatatccttccatggtgtaggcttgtcagtag 189
                |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| 
Sbjct: 22540338 ttgagaaagagattggtgagcaaagggttatatccttccatggtgtaggcttgtcagtaa 22540397

                                
Query: 190      ctgaagaaataaagta 205
                ||||||| ||||||||
Sbjct: 22540398 ctgaagagataaagta 22540413



 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 107/127 (84%)
 Strand = Plus / Plus

                                                                            
Query: 255      ttctcagaggctctgtacagttcagttgttgatcaatataatgtcctcaagtctgctatc 314
                ||||||||| |  ||||||  ||||| |||||||| |||||||  ||||| |||||||||
Sbjct: 22541229 ttctcagagtcattgtacaactcagtcgttgatcagtataatgcgctcaaatctgctatc 22541288

                                                                            
Query: 315      tttagagaccgtggagcagtttcgtcgaaccctgccatctcactctcgcaaccatggcgg 374
                |||||||  || ||||||| ||| ||| ||  ||||||||||||||| ||||||||||| 
Sbjct: 22541289 tttagaggtcgaggagcagattcatcggacagtgccatctcactctcacaaccatggcga 22541348

                       
Query: 375      tgaaact 381
                |||||||
Sbjct: 22541349 tgaaact 22541355
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>gb|AF251795.1|AF251795 Elaeis guineensis glycerol-3-phosphate acyltransferase (GPAT) mRNA,
            complete cds
          Length = 2043

 Score = 89.7 bits (45), Expect = 6e-15
 Identities = 102/121 (84%)
 Strand = Plus / Plus

                                                                        
Query: 30   gtggataatatgaggaggcttctggagcattctggcgttcctgggcacatatatccatta 89
            ||||| || ||||| |||||| ||||||||||| | ||||| ||||| ||||||||  ||
Sbjct: 1297 gtggacaacatgagaaggcttgtggagcattctagtgttccagggcatatatatccgcta 1356

                                                                        
Query: 90   tcattgctatgctatgagattatgcctccaccacaacagattgagaaagagattggtgag 149
            ||||||||||| |||||  | |||||||||||||||||| | |||||  | |||||||||
Sbjct: 1357 tcattgctatgttatgaagtcatgcctccaccacaacaggtagagaagcaaattggtgag 1416

             
Query: 150  c 150
            |
Sbjct: 1417 c 1417
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>emb|Z49091.1|SPACT1MR S.oleracea act1 mRNA for glycerol-3-phosphate acyltransferase
          Length = 2411

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                        
Query: 25   ctgcagtggataatatgaggaggcttctggagcattctggcgttcctgggcacatatatc 84
            ||||| ||||||||||||| |||||| |||| ||| ||||    |||||||| || ||||
Sbjct: 1131 ctgcattggataatatgagaaggcttgtggaacatgctggtagacctgggcatatttatc 1190

                                           
Query: 85   cattatcattgctatgctatgagattatgcc 115
            ||||| ||||  | |||||||| ||||||||
Sbjct: 1191 cattagcattattgtgctatgacattatgcc 1221
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>emb|X77370.1|SOGAT S.oleracea GAT mRNA for glycerol-3-phosphate O-acyltransferase
          Length = 1656

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 75/91 (82%)
 Strand = Plus / Plus

                                                                        
Query: 25   ctgcagtggataatatgaggaggcttctggagcattctggcgttcctgggcacatatatc 84
            ||||| ||||||||||||| |||||| |||| ||| ||||    |||||||| || ||||
Sbjct: 1118 ctgcattggataatatgagaaggcttgtggaacatgctggtagacctgggcatatttatc 1177

                                           
Query: 85   cattatcattgctatgctatgagattatgcc 115
            ||||| ||||  | |||||||| ||||||||
Sbjct: 1178 cattagcattattgtgctatgacattatgcc 1208
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>ref|XM_517982.1| PREDICTED: Pan troglodytes similar to protocadherin alpha 7 isoform
           2 precursor; KIAA0345-like 7; ortholog to mouse CNR4
           (LOC462125), mRNA
          Length = 7283

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 269 gtacagttcagttgttgatcaat 291
           |||||||||||||||||||||||
Sbjct: 668 gtacagttcagttgttgatcaat 690
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>gb|AC005609.1| Homo sapiens chromosome 5, BAC clone 203o13 (LBNL H155), complete
             sequence
          Length = 157970

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 269   gtacagttcagttgttgatcaat 291
             |||||||||||||||||||||||
Sbjct: 69655 gtacagttcagttgttgatcaat 69633
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>ref|NG_000016.1| Homo sapiens protocadherin alpha cluster (PCDHA@) on chromosome 5
          Length = 297736

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 269   gtacagttcagttgttgatcaat 291
             |||||||||||||||||||||||
Sbjct: 88316 gtacagttcagttgttgatcaat 88338
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>ref|NM_031501.1| Homo sapiens protocadherin alpha 5 (PCDHA5), transcript variant 2,
           mRNA
          Length = 2451

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 269 gtacagttcagttgttgatcaat 291
           |||||||||||||||||||||||
Sbjct: 668 gtacagttcagttgttgatcaat 690
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>ref|NM_018908.2| Homo sapiens protocadherin alpha 5 (PCDHA5), transcript variant 1,
           mRNA
          Length = 5218

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 269 gtacagttcagttgttgatcaat 291
           |||||||||||||||||||||||
Sbjct: 668 gtacagttcagttgttgatcaat 690
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>gb|BC033735.1| Homo sapiens protocadherin alpha 5, mRNA (cDNA clone MGC:44897
           IMAGE:5175471), complete cds
          Length = 4260

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 269 gtacagttcagttgttgatcaat 291
           |||||||||||||||||||||||
Sbjct: 807 gtacagttcagttgttgatcaat 829
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>emb|CR860451.1| Pongo pygmaeus mRNA; cDNA DKFZp459H021 (from clone DKFZp459H021)
          Length = 4627

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 269 gtacagttcagttgttgatcaat 291
           |||||||||||||||||||||||
Sbjct: 821 gtacagttcagttgttgatcaat 843
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>dbj|AB176649.1| Macaca fuscata CNRv05 mRNA for Protocadherin alpha, complete cds
          Length = 3120

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 269 gtacagttcagttgttgatcaat 291
           |||||||||||||||||||||||
Sbjct: 668 gtacagttcagttgttgatcaat 690
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>gb|AC008468.6|AC008468 Homo sapiens chromosome 5 clone CTC-365B8, complete sequence
          Length = 117096

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 269   gtacagttcagttgttgatcaat 291
             |||||||||||||||||||||||
Sbjct: 93685 gtacagttcagttgttgatcaat 93663
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>gb|AF152313.1|AF152313 Homo sapiens protocadherin alpha 5 (PCDH-alpha5) mRNA, complete cds
          Length = 5218

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 269 gtacagttcagttgttgatcaat 291
           |||||||||||||||||||||||
Sbjct: 668 gtacagttcagttgttgatcaat 690
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>gb|AF152483.1|AF152483 Homo sapiens protocadherin alpha 5 short form protein (PCDH-alpha5)
           variable region sequence, complete cds
          Length = 2451

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 269 gtacagttcagttgttgatcaat 291
           |||||||||||||||||||||||
Sbjct: 668 gtacagttcagttgttgatcaat 690
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>emb|AL034548.25|HS1103G7 Human DNA sequence from clone RP5-1103G7 on chromosome 20p12.2-13
             Contains the C20orf96 gene, the C20orf99 gene, a novel
             gene, the SOX12 gene for SRY (sex-determining region
             Y)-box 12, the C20orf98 gene for chromosome 20 open
             reading frame 98 (similar to mouse VMP, FLJ23329), the
             C20orf97 gene for a novel kinase domain-containing protein
             similar to phosphoprotein C8FW and rat NIPK, the gene for
             a novel defensin protein (DEFB32, UNQ827, KFLL827) and
             five CpG islands, complete sequence
          Length = 153170

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 287   tcaatataatgtcctcaagtctgct 311
             |||||||| ||||||||||||||||
Sbjct: 94360 tcaatatattgtcctcaagtctgct 94384
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>emb|CR387999.7| Opossum DNA sequence from clone XX-158F12, complete sequence
          Length = 169093

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 55    agcattctggcgttcctgggc 75
             |||||||||||||||||||||
Sbjct: 21719 agcattctggcgttcctgggc 21699
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 119     accacaacagattgagaaaga 139
               |||||||||||||||||||||
Sbjct: 2802295 accacaacagattgagaaaga 2802315
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>emb|AL513302.15| Human DNA sequence from clone RP11-226L15 on chromosome 1 Contains a
             ribosomal protein L27a (RPL27A) pseudogene, the PIGM gene
             for class M phosphatidylinositol glycan, the 3' end of the
             KCNJ10 gene for potassium inwardly-rectifying channel
             subfamily J member 10 and a CpG island, complete sequence
          Length = 56937

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   ttctcagaggctctgtacag 274
             ||||||||||||||||||||
Sbjct: 49957 ttctcagaggctctgtacag 49976
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>gb|BC034036.1| Homo sapiens potassium inwardly-rectifying channel, subfamily J,
            member 10, mRNA (cDNA clone IMAGE:4811633), partial cds
          Length = 4424

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  ttctcagaggctctgtacag 274
            ||||||||||||||||||||
Sbjct: 2428 ttctcagaggctctgtacag 2409
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>gb|AC116419.32| Mus musculus chromosome 1, clone RP24-89C10, complete sequence
          Length = 229522

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    atgaggaggcttctggagca 58
             ||||||||||||||||||||
Sbjct: 63520 atgaggaggcttctggagca 63539
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>gb|AF482710.1|AF482709S2 Homo sapiens potassium inwardly-rectifying channel (KCNJ10) gene,
            exon 2 and complete cds
          Length = 6024

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  ttctcagaggctctgtacag 274
            ||||||||||||||||||||
Sbjct: 2377 ttctcagaggctctgtacag 2358
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>gb|AC079070.6| Homo sapiens chromosome 18, clone RP11-126K15, complete sequence
          Length = 191464

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 139    agattggtgagcaaagggtgatatcctt 166
              |||||||| |||||||||||| ||||||
Sbjct: 135117 agattggtaagcaaagggtgaaatcctt 135144
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>gb|AC083829.5| Homo sapiens BAC clone RP11-466G12 from 4, complete sequence
          Length = 189402

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   tgaggcaagggggaacttct 258
             ||||||||||||||||||||
Sbjct: 19540 tgaggcaagggggaacttct 19521
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>gb|AC090284.6| Homo sapiens chromosome 11, clone RP11-348B14, complete sequence
          Length = 160146

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   tcagtagctgaagaaataaa 202
             ||||||||||||||||||||
Sbjct: 55708 tcagtagctgaagaaataaa 55689
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>gb|AC090226.3| Homo sapiens chromosome 18, clone RP11-723D20, complete sequence
          Length = 173602

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 139   agattggtgagcaaagggtgatatcctt 166
             |||||||| |||||||||||| ||||||
Sbjct: 15948 agattggtaagcaaagggtgaaatcctt 15975
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 65       cgttcctgggcacatatatc 84
                ||||||||||||||||||||
Sbjct: 17794505 cgttcctgggcacatatatc 17794524
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>dbj|AP005069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0654A08
          Length = 154812

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    cgttcctgggcacatatatc 84
             ||||||||||||||||||||
Sbjct: 34036 cgttcctgggcacatatatc 34055
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>ref|NM_002241.3| Homo sapiens potassium inwardly-rectifying channel, subfamily J,
            member 10 (KCNJ10), mRNA
          Length = 4440

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  ttctcagaggctctgtacag 274
            ||||||||||||||||||||
Sbjct: 2436 ttctcagaggctctgtacag 2417
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>emb|CR846100.11| Zebrafish DNA sequence from clone DKEYP-94B4, complete sequence
          Length = 172492

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    acaacagattgagaaagaga 141
              ||||||||||||||||||||
Sbjct: 156889 acaacagattgagaaagaga 156908
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>gb|U73192.1|HSU73192 Human inward rectifier potassium channel Kir1.2 (Kir1.2) gene,
            complete cds
          Length = 2896

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 255  ttctcagaggctctgtacag 274
            ||||||||||||||||||||
Sbjct: 2724 ttctcagaggctctgtacag 2705
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>emb|CT009569.17| Pig DNA sequence from clone CH242-213C10 on chromosome 17, complete
              sequence
          Length = 201723

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 105    gagattatgcctccaccacaacag 128
              ||||||||||||||||| ||||||
Sbjct: 182389 gagattatgcctccacctcaacag 182366
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>emb|AL928545.6| Mouse DNA sequence from clone RP23-218A13 on chromosome 2, complete
              sequence
          Length = 199257

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     tgctatgagattatgcctcc 118
              ||||||||||||||||||||
Sbjct: 186247 tgctatgagattatgcctcc 186266
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>dbj|AP005122.2| Homo sapiens genomic DNA, chromosome 11, clone:RP11-419F8, complete
             sequence
          Length = 170006

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   tcagtagctgaagaaataaa 202
             ||||||||||||||||||||
Sbjct: 27656 tcagtagctgaagaaataaa 27675


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,434,761
Number of Sequences: 3902068
Number of extensions: 3434761
Number of successful extensions: 63241
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63129
Number of HSP's gapped (non-prelim): 112
length of query: 383
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 361
effective length of database: 17,147,199,772
effective search space: 6190139117692
effective search space used: 6190139117692
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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