ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal40e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY676928.1| Oryza sativa (indica cultivar-group) transcriptio... 133 3e-28
2ref|NM_188767.1| Oryza sativa (japonica cultivar-group), predic... 125 7e-26
3gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 125 7e-26
4dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic D... 125 7e-26
5tpg|BK005004.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 125 7e-26
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 125 7e-26
7dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic D... 125 7e-26
8dbj|AK105509.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 7e-26
9gb|AY023191.1| Oryza sativa microsatellite MRG5516 containing (G... 54 2e-04
10gb|AE009177.1| Agrobacterium tumefaciens str. C58 circular chrom... 48 0.013
11gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 48 0.013
12gb|AY167021.1| Cannabis sativa microsatellite ANUCS302 sequence 48 0.013
13emb|BX545917.6| Zebrafish DNA sequence from clone DKEY-27J13 in ... 44 0.20
14emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 42 0.81
15emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 42 0.81
16gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 0.81
17dbj|AK116673.1| Ciona intestinalis cDNA, clone:cicl031p12, full ... 42 0.81
18ref|XM_473099.1| Oryza sativa (japonica cultivar-group), predic... 40 3.2
19ref|XM_364173.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 3.2
20ref|XM_718496.1| Candida albicans SC5314 hypothetical protein (C... 40 3.2
21ref|XM_718308.1| Candida albicans SC5314 hypothetical protein (C... 40 3.2
22ref|XM_710510.1| Candida albicans SC5314 putative mitochondrial ... 40 3.2
23ref|XM_710454.1| Candida albicans SC5314 putative mitochondrial ... 40 3.2
24ref|XM_990138.1| PREDICTED: Mus musculus glycine receptor, alpha... 40 3.2
25gb|AY129229.1| Mus musculus strain C57BL/6 glycine receptor alph... 40 3.2
26emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 3.2
27emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 3.2
28emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4,... 40 3.2
29emb|AL596207.10| Mouse DNA sequence from clone RP23-336J1 on chr... 40 3.2
30ref|NM_020492.2| Mus musculus glycine receptor, alpha 1 subunit ... 40 3.2
31dbj|AK078258.1| Mus musculus adult male olfactory brain cDNA, RI... 40 3.2
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.2
33gb|AE004577.1| Pseudomonas aeruginosa PAO1, section 138 of 529 o... 40 3.2
34gb|AF162936.2|AF162936 Streptomyces coelicolor A3(2) Na/H antipo... 40 3.2
35gb|S73718.1|S73718 Glra1=inhibitory glycine receptor alpha 1 sub... 40 3.2
36gb|S73717.1|S73717 GLRA1=inhibitory glycine receptor alpha 1 sub... 40 3.2
37gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 3.2
38emb|CR812466.18| Zebrafish DNA sequence from clone CH211-269M1 i... 40 3.2
39emb|X75840.1|MMGLRA19 M.musculus Glra1 gene (exon9) 40 3.2
40emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chr... 40 3.2
41gb|M14958.1|APLFMRFG Aplysia californica FMRFamide gene, complet... 40 3.2
42dbj|AB028218.1| Papilio xuthus PxRh5 mRNA for UV opsin, partial cds 40 3.2 
>gb|AY676928.1| Oryza sativa (indica cultivar-group) transcription factor WRKY10
            (WRKY10) mRNA, complete cds
          Length = 1743

 Score =  133 bits (67), Expect = 3e-28
 Identities = 123/142 (86%), Gaps = 6/142 (4%)
 Strand = Plus / Plus

                                                                        
Query: 53   tccgacagcgtcagtgcagcggcggctgcgatcaccgcagacccaaacttcacggtggcg 112
            ||||||| |||||| || |||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 1528 tccgacaccgtcagcgcggcggcggcggcgatcaccgctgaccccaacttcacggtggcg 1587

                                                                        
Query: 113  ctcgccgcggcaatctcgtccatcatggccggccagcac------gccgccggcaacagc 166
            ||||| ||||| ||| |||||||||| | ||||||||||      || ||||||||||||
Sbjct: 1588 ctcgcggcggcgatcacgtccatcataggcggccagcacgcggcggcagccggcaacagc 1647

                                  
Query: 167  aacgcgaacaacaacaacacca 188
            ||||||||||||| ||||||||
Sbjct: 1648 aacgcgaacaacaccaacacca 1669



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                             
Query: 215  aacaacacgacgagcaacaacaccaacagcgag 247
            |||||||||||||||||||||||||||||||||
Sbjct: 1702 aacaacacgacgagcaacaacaccaacagcgag 1734
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>ref|NM_188767.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1908

 Score =  125 bits (63), Expect = 7e-26
 Identities = 122/142 (85%), Gaps = 6/142 (4%)
 Strand = Plus / Plus

                                                                        
Query: 53   tccgacagcgtcagtgcagcggcggctgcgatcaccgcagacccaaacttcacggtggcg 112
            ||||||| |||||| || |||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 1693 tccgacaccgtcagcgcggcggcggcggcgatcaccgctgaccccaacttcacggtggcg 1752

                                                                        
Query: 113  ctcgccgcggcaatctcgtccatcatggccggccagcac------gccgccggcaacagc 166
            ||||| ||||| ||| |||||||||| | ||||||||||      || || |||||||||
Sbjct: 1753 ctcgcggcggcgatcacgtccatcataggcggccagcacgcggcggcagctggcaacagc 1812

                                  
Query: 167  aacgcgaacaacaacaacacca 188
            ||||||||||||| ||||||||
Sbjct: 1813 aacgcgaacaacaccaacacca 1834



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                             
Query: 215  aacaacacgacgagcaacaacaccaacagcgag 247
            |||||||||||||||||||||||||||||||||
Sbjct: 1867 aacaacacgacgagcaacaacaccaacagcgag 1899
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>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score =  125 bits (63), Expect = 7e-26
 Identities = 122/142 (85%), Gaps = 6/142 (4%)
 Strand = Plus / Plus

                                                                         
Query: 53    tccgacagcgtcagtgcagcggcggctgcgatcaccgcagacccaaacttcacggtggcg 112
             ||||||| |||||| || |||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 49580 tccgacaccgtcagcgcggcggcggcggcgatcaccgctgaccccaacttcacggtggcg 49639

                                                                         
Query: 113   ctcgccgcggcaatctcgtccatcatggccggccagcac------gccgccggcaacagc 166
             ||||| ||||| ||| |||||||||| | ||||||||||      || || |||||||||
Sbjct: 49640 ctcgcggcggcgatcacgtccatcataggcggccagcacgcggcggcagctggcaacagc 49699

                                   
Query: 167   aacgcgaacaacaacaacacca 188
             ||||||||||||| ||||||||
Sbjct: 49700 aacgcgaacaacaccaacacca 49721



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                              
Query: 215   aacaacacgacgagcaacaacaccaacagcgag 247
             |||||||||||||||||||||||||||||||||
Sbjct: 49754 aacaacacgacgagcaacaacaccaacagcgag 49786
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>dbj|AP003074.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0004G10
          Length = 150379

 Score =  125 bits (63), Expect = 7e-26
 Identities = 122/142 (85%), Gaps = 6/142 (4%)
 Strand = Plus / Plus

                                                                         
Query: 53    tccgacagcgtcagtgcagcggcggctgcgatcaccgcagacccaaacttcacggtggcg 112
             ||||||| |||||| || |||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 82118 tccgacaccgtcagcgcggcggcggcggcgatcaccgctgaccccaacttcacggtggcg 82177

                                                                         
Query: 113   ctcgccgcggcaatctcgtccatcatggccggccagcac------gccgccggcaacagc 166
             ||||| ||||| ||| |||||||||| | ||||||||||      || || |||||||||
Sbjct: 82178 ctcgcggcggcgatcacgtccatcataggcggccagcacgcggcggcagctggcaacagc 82237

                                   
Query: 167   aacgcgaacaacaacaacacca 188
             ||||||||||||| ||||||||
Sbjct: 82238 aacgcgaacaacaccaacacca 82259



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                              
Query: 215   aacaacacgacgagcaacaacaccaacagcgag 247
             |||||||||||||||||||||||||||||||||
Sbjct: 82292 aacaacacgacgagcaacaacaccaacagcgag 82324
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>tpg|BK005004.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY
            transcription factor 1 (WRKY1) gene, complete cds
          Length = 2434

 Score =  125 bits (63), Expect = 7e-26
 Identities = 122/142 (85%), Gaps = 6/142 (4%)
 Strand = Plus / Plus

                                                                        
Query: 53   tccgacagcgtcagtgcagcggcggctgcgatcaccgcagacccaaacttcacggtggcg 112
            ||||||| |||||| || |||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 2219 tccgacaccgtcagcgcggcggcggcggcgatcaccgctgaccccaacttcacggtggcg 2278

                                                                        
Query: 113  ctcgccgcggcaatctcgtccatcatggccggccagcac------gccgccggcaacagc 166
            ||||| ||||| ||| |||||||||| | ||||||||||      || || |||||||||
Sbjct: 2279 ctcgcggcggcgatcacgtccatcataggcggccagcacgcggcggcagctggcaacagc 2338

                                  
Query: 167  aacgcgaacaacaacaacacca 188
            ||||||||||||| ||||||||
Sbjct: 2339 aacgcgaacaacaccaacacca 2360



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                             
Query: 215  aacaacacgacgagcaacaacaccaacagcgag 247
            |||||||||||||||||||||||||||||||||
Sbjct: 2393 aacaacacgacgagcaacaacaccaacagcgag 2425
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  125 bits (63), Expect = 7e-26
 Identities = 122/142 (85%), Gaps = 6/142 (4%)
 Strand = Plus / Plus

                                                                           
Query: 53      tccgacagcgtcagtgcagcggcggctgcgatcaccgcagacccaaacttcacggtggcg 112
               ||||||| |||||| || |||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 8085467 tccgacaccgtcagcgcggcggcggcggcgatcaccgctgaccccaacttcacggtggcg 8085526

                                                                           
Query: 113     ctcgccgcggcaatctcgtccatcatggccggccagcac------gccgccggcaacagc 166
               ||||| ||||| ||| |||||||||| | ||||||||||      || || |||||||||
Sbjct: 8085527 ctcgcggcggcgatcacgtccatcataggcggccagcacgcggcggcagctggcaacagc 8085586

                                     
Query: 167     aacgcgaacaacaacaacacca 188
               ||||||||||||| ||||||||
Sbjct: 8085587 aacgcgaacaacaccaacacca 8085608



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                                
Query: 215     aacaacacgacgagcaacaacaccaacagcgag 247
               |||||||||||||||||||||||||||||||||
Sbjct: 8085641 aacaacacgacgagcaacaacaccaacagcgag 8085673
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>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0034C11
          Length = 139399

 Score =  125 bits (63), Expect = 7e-26
 Identities = 122/142 (85%), Gaps = 6/142 (4%)
 Strand = Plus / Plus

                                                                        
Query: 53   tccgacagcgtcagtgcagcggcggctgcgatcaccgcagacccaaacttcacggtggcg 112
            ||||||| |||||| || |||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 3185 tccgacaccgtcagcgcggcggcggcggcgatcaccgctgaccccaacttcacggtggcg 3244

                                                                        
Query: 113  ctcgccgcggcaatctcgtccatcatggccggccagcac------gccgccggcaacagc 166
            ||||| ||||| ||| |||||||||| | ||||||||||      || || |||||||||
Sbjct: 3245 ctcgcggcggcgatcacgtccatcataggcggccagcacgcggcggcagctggcaacagc 3304

                                  
Query: 167  aacgcgaacaacaacaacacca 188
            ||||||||||||| ||||||||
Sbjct: 3305 aacgcgaacaacaccaacacca 3326



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                             
Query: 215  aacaacacgacgagcaacaacaccaacagcgag 247
            |||||||||||||||||||||||||||||||||
Sbjct: 3359 aacaacacgacgagcaacaacaccaacagcgag 3391
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>dbj|AK105509.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-E04, full
            insert sequence
          Length = 1606

 Score =  125 bits (63), Expect = 7e-26
 Identities = 122/142 (85%), Gaps = 6/142 (4%)
 Strand = Plus / Plus

                                                                        
Query: 53   tccgacagcgtcagtgcagcggcggctgcgatcaccgcagacccaaacttcacggtggcg 112
            ||||||| |||||| || |||||||| ||||||||||| ||||| |||||||||||||||
Sbjct: 1093 tccgacaccgtcagcgcggcggcggcggcgatcaccgctgaccccaacttcacggtggcg 1152

                                                                        
Query: 113  ctcgccgcggcaatctcgtccatcatggccggccagcac------gccgccggcaacagc 166
            ||||| ||||| ||| |||||||||| | ||||||||||      || || |||||||||
Sbjct: 1153 ctcgcggcggcgatcacgtccatcataggcggccagcacgcggcggcagctggcaacagc 1212

                                  
Query: 167  aacgcgaacaacaacaacacca 188
            ||||||||||||| ||||||||
Sbjct: 1213 aacgcgaacaacaccaacacca 1234



 Score = 65.9 bits (33), Expect = 6e-08
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                             
Query: 215  aacaacacgacgagcaacaacaccaacagcgag 247
            |||||||||||||||||||||||||||||||||
Sbjct: 1267 aacaacacgacgagcaacaacaccaacagcgag 1299
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>gb|AY023191.1| Oryza sativa microsatellite MRG5516 containing (GCG)X8, genomic
           sequence
          Length = 224

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                              
Query: 53  tccgacagcgtcagtgcagcggcggctgcgatcaccgcagacccaaacttc 103
           ||||||| |||||| || |||||||| ||||||||||| ||||| ||||||
Sbjct: 51  tccgacaccgtcagcgcggcggcggcggcgatcaccgctgaccccaacttc 1
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>gb|AE009177.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 203
            of 256 of the complete sequence
          Length = 10933

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 108  tggcgctcgccgcggcaatctcgtccat 135
            |||||||||||||||||||||| |||||
Sbjct: 7215 tggcgctcgccgcggcaatctcctccat 7188
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 108     tggcgctcgccgcggcaatctcgtccat 135
               |||||||||||||||||||||| |||||
Sbjct: 2253850 tggcgctcgccgcggcaatctcctccat 2253823
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>gb|AY167021.1| Cannabis sativa microsatellite ANUCS302 sequence
          Length = 500

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 172 gaacaacaacaacaccactaagaacaac 199
           ||||||||||||||||||||| ||||||
Sbjct: 420 gaacaacaacaacaccactaacaacaac 447
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>emb|BX545917.6| Zebrafish DNA sequence from clone DKEY-27J13 in linkage group 8,
             complete sequence
          Length = 139530

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 160   caacagcaacgcgaacaacaacaacaccac 189
             ||||| |||||| |||||||||||||||||
Sbjct: 81084 caacaacaacgccaacaacaacaacaccac 81055
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>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 140    gccggccagcacgccgccggc 160
              |||||||||||||||||||||
Sbjct: 183884 gccggccagcacgccgccggc 183864
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 140    gccggccagcacgccgccggc 160
              |||||||||||||||||||||
Sbjct: 102631 gccggccagcacgccgccggc 102611
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 103     cacggtggcgctcgccgcggc 123
               |||||||||||||||||||||
Sbjct: 1811154 cacggtggcgctcgccgcggc 1811134
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>dbj|AK116673.1| Ciona intestinalis cDNA, clone:cicl031p12, full insert sequence
          Length = 1480

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 160 caacagcaacgcgaacaacaacaacacca 188
           |||||||||| | ||||||||||||||||
Sbjct: 204 caacagcaacaccaacaacaacaacacca 232
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>ref|XM_473099.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2382

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 215 aacaacacgacgagcaacaacacc 238
           |||| |||||||||||||||||||
Sbjct: 376 aacaccacgacgagcaacaacacc 399
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>ref|XM_364173.1| Magnaporthe grisea 70-15 predicted protein (MG09018.4) partial mRNA
          Length = 1137

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 170 gcgaacaacaacaacaccac 189
           ||||||||||||||||||||
Sbjct: 739 gcgaacaacaacaacaccac 758
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>ref|XM_718496.1| Candida albicans SC5314 hypothetical protein (CaO19_4907), mRNA
          Length = 1818

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 164  agcaacgcgaacaacaacaacaccacta 191
            |||||| ||||||||||||||| |||||
Sbjct: 1339 agcaacacgaacaacaacaacaacacta 1366
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>ref|XM_718308.1| Candida albicans SC5314 hypothetical protein (CaO19_12373), mRNA
          Length = 1818

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 164  agcaacgcgaacaacaacaacaccacta 191
            |||||| ||||||||||||||| |||||
Sbjct: 1339 agcaacacgaacaacaacaacaacacta 1366
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>ref|XM_710510.1| Candida albicans SC5314 putative mitochondrial ATPase
           (CaO19_10409), mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aacaacaacaacaccactaa 192
           ||||||||||||||||||||
Sbjct: 589 aacaacaacaacaccactaa 608
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>ref|XM_710454.1| Candida albicans SC5314 putative mitochondrial ATPase (CaO19_2891),
           mRNA
          Length = 1632

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aacaacaacaacaccactaa 192
           ||||||||||||||||||||
Sbjct: 589 aacaacaacaacaccactaa 608
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>ref|XM_990138.1| PREDICTED: Mus musculus glycine receptor, alpha 1 subunit (Glra1),
            mRNA
          Length = 1922

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  aacaacaacaacaccactaa 192
            ||||||||||||||||||||
Sbjct: 1147 aacaacaacaacaccactaa 1166
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>gb|AY129229.1| Mus musculus strain C57BL/6 glycine receptor alpha 1 subunit (Glra1)
            mRNA, complete cds; alternatively spliced
          Length = 1388

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  aacaacaacaacaccactaa 192
            ||||||||||||||||||||
Sbjct: 1168 aacaacaacaacaccactaa 1187
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>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 135    tcatggccggccagcacgccgccg 158
              |||||||||||||||| |||||||
Sbjct: 253970 tcatggccggccagcatgccgccg 253993
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 100   cttcacggtggcgctcgccgcggc 123
             ||||| ||||||||||||||||||
Sbjct: 25601 cttcaaggtggcgctcgccgcggc 25624
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>emb|AL731626.4|OSJN00271 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0002J11,
             complete sequence
          Length = 143582

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 215   aacaacacgacgagcaacaacacc 238
             |||| |||||||||||||||||||
Sbjct: 54934 aacaccacgacgagcaacaacacc 54957
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>emb|AL596207.10| Mouse DNA sequence from clone RP23-336J1 on chromosome 11 Contains the 5'
              end of the Sparc gene for secreted acidic cysteine rich
              glycoprotein, the Atox1 gene for ATX1 (antioxidant protein
              1) homolog 1 (yeast), an upregulated during skeletal muscle
              growth 5 (Usmg5) pseudogene, the gene for
              Ras-GTPase-activating protein SH3-domain binding protein
              (G3bp-pending) (C87777), a novel gene, the Glra1 gene for
              glycine receptor, alpha 1 subunit, a novel gene, a
              ubiquitously expressed transcript (Uxt) pseudogene and one
              CpG island, complete sequence
          Length = 204037

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 173    aacaacaacaacaccactaa 192
              ||||||||||||||||||||
Sbjct: 108959 aacaacaacaacaccactaa 108940
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>ref|NM_020492.2| Mus musculus glycine receptor, alpha 1 subunit (Glra1), mRNA
          Length = 1407

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  aacaacaacaacaccactaa 192
            ||||||||||||||||||||
Sbjct: 1213 aacaacaacaacaccactaa 1232
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>dbj|AK078258.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430545K04 product:glycine
            receptor, alpha 1 subunit, full insert sequence
          Length = 2387

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  aacaacaacaacaccactaa 192
            ||||||||||||||||||||
Sbjct: 1619 aacaacaacaacaccactaa 1638
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 215      aacaacacgacgagcaacaacacc 238
                |||| |||||||||||||||||||
Sbjct: 25270995 aacaccacgacgagcaacaacacc 25271018
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>gb|AE004577.1| Pseudomonas aeruginosa PAO1, section 138 of 529 of the complete
            genome
          Length = 13737

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 138  tggccggccagcacgccgccggca 161
            ||||||||||||| ||||||||||
Sbjct: 4637 tggccggccagcaggccgccggca 4660
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>gb|AF162936.2|AF162936 Streptomyces coelicolor A3(2) Na/H antiporter homolog gene, partial
           cds; and hypothetical protein (ushY), putative sigma
           factor SigH anti-sigma factor (ushX), and RNA polymerase
           alternative sigma factor (sigH) genes, complete cds
          Length = 3300

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 100 cttcacggtggcgctcgccgcggc 123
           ||||| ||||||||||||||||||
Sbjct: 160 cttcaaggtggcgctcgccgcggc 137
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>gb|S73718.1|S73718 Glra1=inhibitory glycine receptor alpha 1 subunit {alternatively
            spliced} [mice, A/HeJ, brainstem, spinal cord, mRNA
            Mutant, 1431 nt]
          Length = 1431

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  aacaacaacaacaccactaa 192
            ||||||||||||||||||||
Sbjct: 1237 aacaacaacaacaccactaa 1256
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>gb|S73717.1|S73717 GLRA1=inhibitory glycine receptor alpha 1 subunit [mice, A/HeJ,
            brainstem, spinal cord, mRNA, 1407 nt]
          Length = 1407

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  aacaacaacaacaccactaa 192
            ||||||||||||||||||||
Sbjct: 1213 aacaacaacaacaccactaa 1232
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 139    ggccggccagcacgccgccggcaa 162
              ||||||||| ||||||||||||||
Sbjct: 983747 ggccggccaccacgccgccggcaa 983770
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>emb|CR812466.18| Zebrafish DNA sequence from clone CH211-269M1 in linkage group 1,
             complete sequence
          Length = 138505

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 172   gaacaacaacaacaccactaagaacaac 199
             |||||||||||||| |||||| ||||||
Sbjct: 69910 gaacaacaacaacaacactaacaacaac 69937
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>emb|X75840.1|MMGLRA19 M.musculus Glra1 gene (exon9)
          Length = 637

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 173 aacaacaacaacaccactaa 192
           ||||||||||||||||||||
Sbjct: 314 aacaacaacaacaccactaa 333
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>emb|AL844895.6| Mouse DNA sequence from clone RP23-359N12 on chromosome 2, complete
              sequence
          Length = 210427

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 173    aacaacaacaacaccactaa 192
              ||||||||||||||||||||
Sbjct: 192646 aacaacaacaacaccactaa 192665
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>gb|M14958.1|APLFMRFG Aplysia californica FMRFamide gene, complete cds
          Length = 2492

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 173  aacaacaacaacaccactaagaacaacg 200
            ||||||||||||||||| || |||||||
Sbjct: 2460 aacaacaacaacaccaccaacaacaacg 2487
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>dbj|AB028218.1| Papilio xuthus PxRh5 mRNA for UV opsin, partial cds
          Length = 1547

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 217  caacacgacgagcaacaacaccaacagc 244
            ||||||||||||||||| | ||||||||
Sbjct: 1154 caacacgacgagcaacaccgccaacagc 1181


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,548,607
Number of Sequences: 3902068
Number of extensions: 2548607
Number of successful extensions: 69210
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68910
Number of HSP's gapped (non-prelim): 296
length of query: 247
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 225
effective length of database: 17,147,199,772
effective search space: 3858119948700
effective search space used: 3858119948700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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