ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal40e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065414.1| Oryza sativa (japonica cultivar-group) cDNA clon... 521 e-145
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 94 6e-16
3dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic D... 94 6e-16
4dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic D... 94 6e-16
5gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence 82 2e-12
6ref|XM_481915.1| Oryza sativa (japonica cultivar-group), mRNA 64 6e-07
7ref|XM_481914.1| Oryza sativa (japonica cultivar-group), mRNA 64 6e-07
8ref|XM_507201.1| PREDICTED Oryza sativa (japonica cultivar-group... 64 6e-07
9dbj|AK112035.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
10dbj|AK105899.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
11dbj|AK070322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
12gb|AY106382.1| Zea mays PCO146928 mRNA sequence 56 1e-04
13gb|DQ167205.1| Zea mays putative wound responsive protein mRNA, ... 46 0.13
14dbj|AB009885.1| Nicotiana tabacum wound inducive mRNA , complete... 44 0.51
15gb|AC114574.8| Mus musculus chromosome 6, clone RP23-151F20, com... 42 2.0
16emb|AL365500.9| Human DNA sequence from clone RP11-232C13 on chr... 42 2.0
17emb|AL110292.4|CNS018P1 Human chromosome 14 DNA sequence BAC R-3... 42 2.0
18gb|AC154019.3| Mus musculus 6 BAC RP24-374A6 (Roswell Park Cance... 42 2.0
19ref|XM_476518.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.0
20gb|U91324.1|HUU91324 Homo sapiens Chromosome 16 BAC clone CIT987... 40 8.0
21gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, co... 40 8.0
22gb|AY058645.1| Drosophila melanogaster LD34489 full insert cDNA 40 8.0
23dbj|AK095936.1| Homo sapiens cDNA FLJ38617 fis, clone HEART2007231 40 8.0
24gb|AY274933.1| Pisum sativum Stp-h4 gene, complete cds 40 8.0
25gb|AY274932.1| Pisum sativum Stp-h3 gene, complete cds 40 8.0
26gb|AY274931.1| Pisum sativum Stp-h2 gene, complete cds 40 8.0
27gb|AY274930.1| Pisum sativum Stp-h1 pseudogene, complete sequence 40 8.0
28ref|NM_166690.1| Drosophila melanogaster CG30420-RA, transcript ... 40 8.0
29ref|NM_138130.2| Drosophila melanogaster CG30420-RB, transcript ... 40 8.0
30gb|AC011366.6| Homo sapiens chromosome 5 clone CTC-568L21, compl... 40 8.0
31gb|AY060248.1| Drosophila melanogaster GH07217 full length cDNA 40 8.0
32dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
33dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
34dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
35gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, r... 40 8.0
36gb|AC007464.4| Homo sapiens BAC clone RP11-542B5 from 2, complet... 40 8.0
37gb|AY254046.1| Homo sapiens caspase 6, apoptosis-related cystein... 40 8.0
38dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 8.0
39gb|AC008417.3|AC008417 Homo sapiens chromosome 5 clone CTC-287O8... 40 8.0
40dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 8.0
41dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
42dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
43dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
44gb|AC018725.1|AC018725 Homo sapiens chromosome 19, cosmid F22273... 40 8.0
45emb|CT737352.3| Human DNA sequence from clone XX-HCC1954_35H21, ... 40 8.0
46emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-8... 40 8.0
47emb|AL163952.5|CNS05TBP Human chromosome 14 DNA sequence BAC R-1... 40 8.0
48gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72... 40 8.0
49gb|AC006213.1|AC006213 Homo sapiens, clone hRPK.15_A_1, complete... 40 8.0
50dbj|AP004301.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.0
51gb|AC004067.1|AC004067 Homo sapiens chromosome 4 clone B366O24 m... 40 8.0 
>dbj|AK065414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022J10, full
            insert sequence
          Length = 1348

 Score =  521 bits (263), Expect = e-145
 Identities = 482/555 (86%)
 Strand = Plus / Plus

                                                                        
Query: 7    atggaagatgggagcgatcttctgctccccattattgtcatggagacaccaagtattatg 66
            ||||||||||| || |||||| |||| || ||||| |||||||| |||||||||||||||
Sbjct: 559  atggaagatggaagtgatcttttgcttccaattatcgtcatggaaacaccaagtattatg 618

                                                                        
Query: 67   ctactggccgcccttcggaacattcggattccaaggccaacaatttataatgtggtaaag 126
             | ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 619  ttgctggctgcccttcggaacattcgaattccaaggccaactatttataatgtggtaaag 678

                                                                        
Query: 127  gagatgaccgaaatgatgggatacacggtacgtttggtgcggattacagaaatggtgcat 186
            ||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| |||
Sbjct: 679  gagatgaccgaaaggatgggatatgcggtacgtttggtgcggattacagaaatggtccat 738

                                                                        
Query: 187  gatgcttactactctagattgtatcttgcaaagactggaaatgaagaagaggttattagt 246
            ||||| ||||| ||| ||||||||||||| |||| ||| |||||||| |||  |||||| 
Sbjct: 739  gatgcatactattctcgattgtatcttgctaagattggcaatgaagaggagactattagc 798

                                                                        
Query: 247  tttgatctcaagccatcagatgccatcaacattgctttccggtgcaaggttcctatacaa 306
            || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 799  ttagatctcaagccatcagatgccatcaacattgctttccggtgtaaggttcctatacaa 858

                                                                        
Query: 307  gtcaataagcgcattgcatacaacaacggtctgaaagtgatacagccaaagccaactggg 366
            || |||| ||| || || || ||||| ||  |||||||  |||| ||||  ||| ||| |
Sbjct: 859  gtgaataggcgtatagcgtataacaatggattgaaagttgtacaaccaacaccatctgag 918

                                                                        
Query: 367  agctacgtgaactctgaccaaatccaatacgcgagactggacaagcccggcgaccagcct 426
            ||||| || | ||| |||||| |||||||| | ||||| |||| ||| | ||| || |||
Sbjct: 919  agctatgtaagctcagaccaattccaatacacaagacttgacaggcctgacgatcaacct 978

                                                                        
Query: 427  tgctttgaagcccaggagtttgatttggtgcgcggcatgcttgttgctgctgttgaggaa 486
            |||||||| ||||| |||||||||||||| |||   ||||| || |||||||||||||||
Sbjct: 979  tgctttgaggcccaagagtttgatttggtccgcaatatgctggtcgctgctgttgaggaa 1038

                                                                        
Query: 487  cgttataaagatgctgctcaatacagagatcgccttctcatgttccgggcaaacaaaaag 546
            || || |||||||||||||||||||||||||  ||| |||||||||||||||| ||||||
Sbjct: 1039 cgctacaaagatgctgctcaatacagagatcagcttttcatgttccgggcaaagaaaaag 1098

                           
Query: 547  aacacgatataacag 561
            |||| ||| ||||||
Sbjct: 1099 aacatgatttaacag 1113
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                            
Query: 153      ggtacgtttggtgcggattacagaaatggtgcatgatgcttactactctagattgtatct 212
                |||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||||
Sbjct: 29067912 ggtacgtttggtgcggattacagaaatggtccatgatgcatactattctcgattgtatct 29067853

                   
Query: 213      tgc 215
                |||
Sbjct: 29067852 tgc 29067850



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                            
Query: 226      aatgaagaagaggttattagttttgatctcaagccatcagatgccatcaacattgctttc 285
                |||||||| |||  |||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 29067513 aatgaagaggagactattagcttagatctcaagccatcagatgccatcaacattgctttc 29067454

                           
Query: 286      cggtgcaaggt 296
                ||||| |||||
Sbjct: 29067453 cggtgtaaggt 29067443



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 51/53 (96%)
 Strand = Plus / Minus

                                                                     
Query: 97       ccaaggccaacaatttataatgtggtaaaggagatgaccgaaatgatgggata 149
                ||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 29068262 ccaaggccaactatttataatgtggtaaaggagatgaccgaaaggatgggata 29068210



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                            
Query: 424      ccttgctttgaagcccaggagtttgatttggtgcgcggcatgcttgttgctgctgttgag 483
                ||||||||||| ||||| |||||||||||||| |||   ||||| || ||||||||||||
Sbjct: 29066792 ccttgctttgaggcccaagagtttgatttggtccgcaatatgctggtcgctgctgttgag 29066733

                                   
Query: 484      gaacgttataaagatgctg 502
                ||||| || ||||||||||
Sbjct: 29066732 gaacgctacaaagatgctg 29066714



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                            
Query: 502      gctcaatacagagatcgccttctcatgttccgggcaaacaaaaagaacacgatataacag 561
                ||||||||||||||||  ||| |||||||||||||||| |||||||||| ||| ||||||
Sbjct: 29066452 gctcaatacagagatcagcttttcatgttccgggcaaagaaaaagaacatgatttaacag 29066393



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 47       tggagacaccaagtattatgctactggccgcccttcggaacattcg 92
                |||| ||||||||||||||| | ||||| |||||||||||||||||
Sbjct: 29068430 tggaaacaccaagtattatgttgctggctgcccttcggaacattcg 29068385



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 93/117 (79%)
 Strand = Plus / Minus

                                                                            
Query: 293      aggttcctatacaagtcaataagcgcattgcatacaacaacggtctgaaagtgatacagc 352
                |||||||||||||||| |||| ||| || || || ||||| ||  |||||||  |||| |
Sbjct: 29067007 aggttcctatacaagtgaataggcgtatagcgtataacaatggattgaaagttgtacaac 29066948

                                                                         
Query: 353      caaagccaactgggagctacgtgaactctgaccaaatccaatacgcgagactggaca 409
                |||  ||| ||| |||||| || | ||| |||||| |||||||| | ||||| ||||
Sbjct: 29066947 caacaccatctgagagctatgtaagctcagaccaattccaatacacaagacttgaca 29066891
to top
>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0047E11
          Length = 148109

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                          
Query: 153    ggtacgtttggtgcggattacagaaatggtgcatgatgcttactactctagattgtatct 212
              |||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||||
Sbjct: 112270 ggtacgtttggtgcggattacagaaatggtccatgatgcatactattctcgattgtatct 112211

                 
Query: 213    tgc 215
              |||
Sbjct: 112210 tgc 112208



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                          
Query: 226    aatgaagaagaggttattagttttgatctcaagccatcagatgccatcaacattgctttc 285
              |||||||| |||  |||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 111871 aatgaagaggagactattagcttagatctcaagccatcagatgccatcaacattgctttc 111812

                         
Query: 286    cggtgcaaggt 296
              ||||| |||||
Sbjct: 111811 cggtgtaaggt 111801



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 51/53 (96%)
 Strand = Plus / Minus

                                                                   
Query: 97     ccaaggccaacaatttataatgtggtaaaggagatgaccgaaatgatgggata 149
              ||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 112620 ccaaggccaactatttataatgtggtaaaggagatgaccgaaaggatgggata 112568



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                          
Query: 424    ccttgctttgaagcccaggagtttgatttggtgcgcggcatgcttgttgctgctgttgag 483
              ||||||||||| ||||| |||||||||||||| |||   ||||| || ||||||||||||
Sbjct: 111150 ccttgctttgaggcccaagagtttgatttggtccgcaatatgctggtcgctgctgttgag 111091

                                 
Query: 484    gaacgttataaagatgctg 502
              ||||| || ||||||||||
Sbjct: 111090 gaacgctacaaagatgctg 111072



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                          
Query: 502    gctcaatacagagatcgccttctcatgttccgggcaaacaaaaagaacacgatataacag 561
              ||||||||||||||||  ||| |||||||||||||||| |||||||||| ||| ||||||
Sbjct: 110810 gctcaatacagagatcagcttttcatgttccgggcaaagaaaaagaacatgatttaacag 110751



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 47     tggagacaccaagtattatgctactggccgcccttcggaacattcg 92
              |||| ||||||||||||||| | ||||| |||||||||||||||||
Sbjct: 112788 tggaaacaccaagtattatgttgctggctgcccttcggaacattcg 112743



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 93/117 (79%)
 Strand = Plus / Minus

                                                                          
Query: 293    aggttcctatacaagtcaataagcgcattgcatacaacaacggtctgaaagtgatacagc 352
              |||||||||||||||| |||| ||| || || || ||||| ||  |||||||  |||| |
Sbjct: 111365 aggttcctatacaagtgaataggcgtatagcgtataacaatggattgaaagttgtacaac 111306

                                                                       
Query: 353    caaagccaactgggagctacgtgaactctgaccaaatccaatacgcgagactggaca 409
              |||  ||| ||| |||||| || | ||| |||||| |||||||| | ||||| ||||
Sbjct: 111305 caacaccatctgagagctatgtaagctcagaccaattccaatacacaagacttgaca 111249
to top
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0421H07
          Length = 158126

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 59/63 (93%)
 Strand = Plus / Minus

                                                                         
Query: 153   ggtacgtttggtgcggattacagaaatggtgcatgatgcttactactctagattgtatct 212
             |||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||||
Sbjct: 28278 ggtacgtttggtgcggattacagaaatggtccatgatgcatactattctcgattgtatct 28219

                
Query: 213   tgc 215
             |||
Sbjct: 28218 tgc 28216



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                         
Query: 226   aatgaagaagaggttattagttttgatctcaagccatcagatgccatcaacattgctttc 285
             |||||||| |||  |||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 27879 aatgaagaggagactattagcttagatctcaagccatcagatgccatcaacattgctttc 27820

                        
Query: 286   cggtgcaaggt 296
             ||||| |||||
Sbjct: 27819 cggtgtaaggt 27809



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 51/53 (96%)
 Strand = Plus / Minus

                                                                  
Query: 97    ccaaggccaacaatttataatgtggtaaaggagatgaccgaaatgatgggata 149
             ||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 28628 ccaaggccaactatttataatgtggtaaaggagatgaccgaaaggatgggata 28576



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                         
Query: 424   ccttgctttgaagcccaggagtttgatttggtgcgcggcatgcttgttgctgctgttgag 483
             ||||||||||| ||||| |||||||||||||| |||   ||||| || ||||||||||||
Sbjct: 27158 ccttgctttgaggcccaagagtttgatttggtccgcaatatgctggtcgctgctgttgag 27099

                                
Query: 484   gaacgttataaagatgctg 502
             ||||| || ||||||||||
Sbjct: 27098 gaacgctacaaagatgctg 27080



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                         
Query: 502   gctcaatacagagatcgccttctcatgttccgggcaaacaaaaagaacacgatataacag 561
             ||||||||||||||||  ||| |||||||||||||||| |||||||||| ||| ||||||
Sbjct: 26818 gctcaatacagagatcagcttttcatgttccgggcaaagaaaaagaacatgatttaacag 26759



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                           
Query: 47    tggagacaccaagtattatgctactggccgcccttcggaacattcg 92
             |||| ||||||||||||||| | ||||| |||||||||||||||||
Sbjct: 28796 tggaaacaccaagtattatgttgctggctgcccttcggaacattcg 28751



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 93/117 (79%)
 Strand = Plus / Minus

                                                                         
Query: 293   aggttcctatacaagtcaataagcgcattgcatacaacaacggtctgaaagtgatacagc 352
             |||||||||||||||| |||| ||| || || || ||||| ||  |||||||  |||| |
Sbjct: 27373 aggttcctatacaagtgaataggcgtatagcgtataacaatggattgaaagttgtacaac 27314

                                                                      
Query: 353   caaagccaactgggagctacgtgaactctgaccaaatccaatacgcgagactggaca 409
             |||  ||| ||| |||||| || | ||| |||||| |||||||| | ||||| ||||
Sbjct: 27313 caacaccatctgagagctatgtaagctcagaccaattccaatacacaagacttgaca 27257
to top
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence
          Length = 204120

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                      
Query: 240   tattagttttgatctcaagccatcagatgccatcaacattgctttccggtgcaaggt 296
             |||||||||||| ||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 86566 tattagttttgacctcaagccatcggatgctatcaacattgctttccgttgcaaggt 86510



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Minus

                                                                         
Query: 157   cgtttggtgcggattacagaaatggtgcatgatgcttactactctagattgtatcttgca 216
             |||||||||||||||||||||||||| ||||| || ||||| ||| || |||||||||||
Sbjct: 86736 cgtttggtgcggattacagaaatggtccatgacgcatactattctcgactgtatcttgca 86677

                
Query: 217   aag 219
             |||
Sbjct: 86676 aag 86674
to top
>ref|XM_481915.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1119

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 262 tcagatgccatcaacattgctttccggtgcaaggttcctatacaagtc 309
           ||||||||||| ||||||||| | || |||||||||||||||||||||
Sbjct: 646 tcagatgccataaacattgctgttcgctgcaaggttcctatacaagtc 693
to top
>ref|XM_481914.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1460

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 262 tcagatgccatcaacattgctttccggtgcaaggttcctatacaagtc 309
           ||||||||||| ||||||||| | || |||||||||||||||||||||
Sbjct: 941 tcagatgccataaacattgctgttcgctgcaaggttcctatacaagtc 988
to top
>ref|XM_507201.1| PREDICTED Oryza sativa (japonica cultivar-group), P0426E02.15-2
           mRNA
          Length = 1525

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 262 tcagatgccatcaacattgctttccggtgcaaggttcctatacaagtc 309
           ||||||||||| ||||||||| | || |||||||||||||||||||||
Sbjct: 921 tcagatgccataaacattgctgttcgctgcaaggttcctatacaagtc 968
to top
>dbj|AK112035.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G04, full
           insert sequence
          Length = 1119

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 262 tcagatgccatcaacattgctttccggtgcaaggttcctatacaagtc 309
           ||||||||||| ||||||||| | || |||||||||||||||||||||
Sbjct: 646 tcagatgccataaacattgctgttcgctgcaaggttcctatacaagtc 693
to top
>dbj|AK105899.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F07, full
           insert sequence
          Length = 1460

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 262 tcagatgccatcaacattgctttccggtgcaaggttcctatacaagtc 309
           ||||||||||| ||||||||| | || |||||||||||||||||||||
Sbjct: 941 tcagatgccataaacattgctgttcgctgcaaggttcctatacaagtc 988
to top
>dbj|AK070322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052C20, full
           insert sequence
          Length = 1525

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 262 tcagatgccatcaacattgctttccggtgcaaggttcctatacaagtc 309
           ||||||||||| ||||||||| | || |||||||||||||||||||||
Sbjct: 921 tcagatgccataaacattgctgttcgctgcaaggttcctatacaagtc 968
to top
>gb|AY106382.1| Zea mays PCO146928 mRNA sequence
          Length = 1474

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 262 tcagatgccatcaacattgctttccggtgcaaggttcctatacaagtc 309
           ||||||||||| ||||||||| | || |||||||||||| ||||||||
Sbjct: 908 tcagatgccataaacattgctgttcgttgcaaggttcctgtacaagtc 955
to top
>gb|DQ167205.1| Zea mays putative wound responsive protein mRNA, complete cds
          Length = 717

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 262 tcagatgccatcaacattgctttccggtgcaaggttcct 300
           ||||||||||| ||||||||| | || ||||||||||||
Sbjct: 664 tcagatgccataaacattgctgttcgttgcaaggttcct 702
to top
>dbj|AB009885.1| Nicotiana tabacum wound inducive mRNA , complete cds
          Length = 1525

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 265 gatgccatcaacattgctttccggtgcaaggttcctatacaagtcaataa 314
           ||||| |||||||||||| | |  |||||||| || ||||||||||||||
Sbjct: 910 gatgcgatcaacattgctgtgcaatgcaaggtgccaatacaagtcaataa 959
to top
>gb|AC114574.8| Mus musculus chromosome 6, clone RP23-151F20, complete sequence
          Length = 252723

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 224    gaaatgaagaagaggttattagttt 248
              ||||||||||||||||||| |||||
Sbjct: 226544 gaaatgaagaagaggttataagttt 226520
to top
>emb|AL365500.9| Human DNA sequence from clone RP11-232C13 on chromosome 10 Contains the
             5' end of a novel gene, complete sequence
          Length = 153558

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 432   tgaagcccaggagtttgattt 452
             |||||||||||||||||||||
Sbjct: 33354 tgaagcccaggagtttgattt 33374
to top
>emb|AL110292.4|CNS018P1 Human chromosome 14 DNA sequence BAC R-384J4 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177427

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 429    ctttgaagcccaggagtttga 449
              |||||||||||||||||||||
Sbjct: 122882 ctttgaagcccaggagtttga 122902
to top
>gb|AC154019.3| Mus musculus 6 BAC RP24-374A6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 169229

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 224    gaaatgaagaagaggttattagttt 248
              ||||||||||||||||||| |||||
Sbjct: 145682 gaaatgaagaagaggttataagttt 145706
to top
>ref|XM_476518.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2283

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 gtctgaaagtgatacagcca 354
           ||||||||||||||||||||
Sbjct: 96  gtctgaaagtgatacagcca 77
to top
>gb|U91324.1|HUU91324 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-100B4  ~complete
             genomic sequence, complete sequence
          Length = 174826

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   agactggaaatgaagaagag 237
             ||||||||||||||||||||
Sbjct: 45159 agactggaaatgaagaagag 45140
to top
>gb|AC102429.11| Mus musculus chromosome 18, clone RP24-93K11, complete sequence
          Length = 216331

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   tacagccaaagccaactggg 366
             ||||||||||||||||||||
Sbjct: 50664 tacagccaaagccaactggg 50683
to top
>gb|AY058645.1| Drosophila melanogaster LD34489 full insert cDNA
          Length = 3313

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 566  agatgggggtgtacatagtg 585
            ||||||||||||||||||||
Sbjct: 2062 agatgggggtgtacatagtg 2081
to top
>dbj|AK095936.1| Homo sapiens cDNA FLJ38617 fis, clone HEART2007231
          Length = 2183

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 435  agcccaggagtttgatttgg 454
            ||||||||||||||||||||
Sbjct: 1442 agcccaggagtttgatttgg 1423
to top
>gb|AY274933.1| Pisum sativum Stp-h4 gene, complete cds
          Length = 1681

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 464  tgcttgttgctgctgttgag 483
            ||||||||||||||||||||
Sbjct: 1217 tgcttgttgctgctgttgag 1236
to top
>gb|AY274932.1| Pisum sativum Stp-h3 gene, complete cds
          Length = 1677

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 464  tgcttgttgctgctgttgag 483
            ||||||||||||||||||||
Sbjct: 1213 tgcttgttgctgctgttgag 1232
to top
>gb|AY274931.1| Pisum sativum Stp-h2 gene, complete cds
          Length = 1677

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 464  tgcttgttgctgctgttgag 483
            ||||||||||||||||||||
Sbjct: 1213 tgcttgttgctgctgttgag 1232
to top
>gb|AY274930.1| Pisum sativum Stp-h1 pseudogene, complete sequence
          Length = 1683

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 464  tgcttgttgctgctgttgag 483
            ||||||||||||||||||||
Sbjct: 1219 tgcttgttgctgctgttgag 1238
to top
>ref|NM_166690.1| Drosophila melanogaster CG30420-RA, transcript variant A (Atf-2),
            mRNA
          Length = 3274

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 566  agatgggggtgtacatagtg 585
            ||||||||||||||||||||
Sbjct: 2062 agatgggggtgtacatagtg 2081
to top
>ref|NM_138130.2| Drosophila melanogaster CG30420-RB, transcript variant B (Atf-2),
            mRNA
          Length = 2685

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 566  agatgggggtgtacatagtg 585
            ||||||||||||||||||||
Sbjct: 1473 agatgggggtgtacatagtg 1492
to top
>gb|AC011366.6| Homo sapiens chromosome 5 clone CTC-568L21, complete sequence
          Length = 177954

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 491    ataaagatgctgctcaatac 510
              ||||||||||||||||||||
Sbjct: 175200 ataaagatgctgctcaatac 175219
to top
>gb|AY060248.1| Drosophila melanogaster GH07217 full length cDNA
          Length = 4583

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 566  agatgggggtgtacatagtg 585
            ||||||||||||||||||||
Sbjct: 2364 agatgggggtgtacatagtg 2383
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 535    gcaaacaaaaagaacacgat 554
              ||||||||||||||||||||
Sbjct: 475941 gcaaacaaaaagaacacgat 475922
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 335     gtctgaaagtgatacagcca 354
               ||||||||||||||||||||
Sbjct: 1648301 gtctgaaagtgatacagcca 1648320
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 535      gcaaacaaaaagaacacgat 554
                ||||||||||||||||||||
Sbjct: 14432387 gcaaacaaaaagaacacgat 14432368
to top
>gb|AC007884.5|AC007884 Drosophila melanogaster, chromosome 2R, region 60F-60F, BAC clone
             BACR08I14, complete sequence
          Length = 190616

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 566   agatgggggtgtacatagtg 585
             ||||||||||||||||||||
Sbjct: 39313 agatgggggtgtacatagtg 39332
to top
>gb|AC007464.4| Homo sapiens BAC clone RP11-542B5 from 2, complete sequence
          Length = 186187

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 218    agactggaaatgaagaagag 237
              ||||||||||||||||||||
Sbjct: 170229 agactggaaatgaagaagag 170210
to top
>gb|AY254046.1| Homo sapiens caspase 6, apoptosis-related cysteine protease (CASP6)
             gene, complete cds
          Length = 17719

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 435   agcccaggagtttgatttgg 454
             ||||||||||||||||||||
Sbjct: 16637 agcccaggagtttgatttgg 16656
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 406     gacaagcccggcgaccagcc 425
               ||||||||||||||||||||
Sbjct: 5201881 gacaagcccggcgaccagcc 5201862
to top
>gb|AC008417.3|AC008417 Homo sapiens chromosome 5 clone CTC-287O8, complete sequence
          Length = 216067

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 491    ataaagatgctgctcaatac 510
              ||||||||||||||||||||
Sbjct: 174876 ataaagatgctgctcaatac 174857
to top
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 265     gatgccatcaacattgcttt 284
               ||||||||||||||||||||
Sbjct: 2100930 gatgccatcaacattgcttt 2100949
to top
>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021M10
          Length = 163416

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 535   gcaaacaaaaagaacacgat 554
             ||||||||||||||||||||
Sbjct: 25561 gcaaacaaaaagaacacgat 25542
to top
>dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0088O14
          Length = 179483

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    gtctgaaagtgatacagcca 354
              ||||||||||||||||||||
Sbjct: 116956 gtctgaaagtgatacagcca 116975
to top
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0007D08
          Length = 183142

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 535   gcaaacaaaaagaacacgat 554
             ||||||||||||||||||||
Sbjct: 65901 gcaaacaaaaagaacacgat 65882
to top
>gb|AC018725.1|AC018725 Homo sapiens chromosome 19, cosmid F22273, complete sequence
          Length = 38015

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 432   tgaagcccaggagtttgatt 451
             ||||||||||||||||||||
Sbjct: 28352 tgaagcccaggagtttgatt 28333
to top
>emb|CT737352.3| Human DNA sequence from clone XX-HCC1954_35H21, complete sequence
          Length = 158492

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 491   ataaagatgctgctcaatac 510
             ||||||||||||||||||||
Sbjct: 24500 ataaagatgctgctcaatac 24481
to top
>emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-813I20 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 216647

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 423  gccttgctttgaagcccagg 442
            ||||||||||||||||||||
Sbjct: 7606 gccttgctttgaagcccagg 7587
to top
>emb|AL163952.5|CNS05TBP Human chromosome 14 DNA sequence BAC R-1012E15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196514

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 423    gccttgctttgaagcccagg 442
              ||||||||||||||||||||
Sbjct: 194349 gccttgctttgaagcccagg 194330
to top
>gb|AE003465.3| Drosophila melanogaster chromosome 2R, section 72 of 73 of the complete
              sequence
          Length = 343833

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 566    agatgggggtgtacatagtg 585
              ||||||||||||||||||||
Sbjct: 191617 agatgggggtgtacatagtg 191636
to top
>gb|AC006213.1|AC006213 Homo sapiens, clone hRPK.15_A_1, complete sequence
          Length = 160754

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 432  tgaagcccaggagtttgatt 451
            ||||||||||||||||||||
Sbjct: 8790 tgaagcccaggagtttgatt 8809
to top
>dbj|AP004301.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0483E09
          Length = 69300

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   gtctgaaagtgatacagcca 354
             ||||||||||||||||||||
Sbjct: 57454 gtctgaaagtgatacagcca 57473
to top
>gb|AC004067.1|AC004067 Homo sapiens chromosome 4 clone B366O24 map 4q25, complete sequence
          Length = 161326

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 435    agcccaggagtttgatttgg 454
              ||||||||||||||||||||
Sbjct: 115501 agcccaggagtttgatttgg 115482


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,466,292
Number of Sequences: 3902068
Number of extensions: 5466292
Number of successful extensions: 149132
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 148843
Number of HSP's gapped (non-prelim): 289
length of query: 591
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 568
effective length of database: 17,143,297,704
effective search space: 9737393095872
effective search space used: 9737393095872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top