>ref|XM_470668.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1294

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 142/179 (79%)
 Strand = Plus / Plus

                                                                       
Query: 257 gaccacaagtacctcccgcggatcgcgccccactacctcaaatggagggctcagcacgga 316
           |||||||| ||||||||  |||| || || |||| ||||||||||||||||||| | |||
Sbjct: 44  gaccacaactacctcccaaggatagcacctcacttcctcaaatggagggctcagtatgga 103

                                                                       
Query: 317 gaaccatttctatactggcatgggccacagccacgaatctgcatatttgagtacgaaatg 376
           ||| | ||||| |  ||| ||||  || ||||||| |||||||| || || || ||  ||
Sbjct: 104 gaagcgtttctgttttggtatggagcaaagccacgcatctgcattttcgactatgagttg 163

                                                                      
Query: 377 gcaaggcaaatcctttcaaccaagtccggacatttcgtgaagaacgatgcacacccaac 435
           || ||||| || || || | |||||| ||||||||  ||||||| ||||| | ||||||
Sbjct: 164 gctaggcagattctctcgagcaagtctggacattttctgaagaatgatgcgcccccaac 222

>ref|NM_184935.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1223

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                  
Query: 158 caagggatccatggaccctcctacaggttcttgaaaggctgcaacgaggacgtga 212
           ||||| |||| ||||||  |||||| |||||||||||||||||| ||||| ||||
Sbjct: 63  caaggaatccgtggaccaccctacaagttcttgaaaggctgcaatgaggatgtga 117

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                       
Query: 158      caagggatccatggaccctcctacaggttcttgaaaggctgcaacgaggacgtga 212
                ||||| |||| ||||||  |||||| |||||||||||||||||| ||||| ||||
Sbjct: 14397654 caaggaatccgtggaccaccctacaagttcttgaaaggctgcaatgaggatgtga 14397708



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                      
Query: 257      gaccacaagtacctcccgcggatcgcgccccactacctcaaatggagggctcag 310
                |||||||| ||||||||  |||| || || |||| |||||||||||||||||||
Sbjct: 14405904 gaccacaactacctcccaaggatagcacctcacttcctcaaatggagggctcag 14405957



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 407      catttcgtgaagaacgatgcacaccca 433
                ||||||||||||||||| |||||||||
Sbjct: 14392813 catttcgtgaagaacgacgcacaccca 14392839



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 211      gaggagcatcaaggaggaga 230
                ||||||||||||||||||||
Sbjct: 22918978 gaggagcatcaaggaggaga 22918959



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 471      tggaaggcgcggattgggtgcgccaccgtagg 502
                |||||||||| ||||||||||| || ||||||
Sbjct: 14392877 tggaaggcgcagattgggtgcggcatcgtagg 14392908

>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete
              sequence
          Length = 158714

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                     
Query: 158    caagggatccatggaccctcctacaggttcttgaaaggctgcaacgaggacgtga 212
              ||||| |||| ||||||  |||||| |||||||||||||||||| ||||| ||||
Sbjct: 146883 caaggaatccgtggaccaccctacaagttcttgaaaggctgcaatgaggatgtga 146937



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                    
Query: 257    gaccacaagtacctcccgcggatcgcgccccactacctcaaatggagggctcag 310
              |||||||| ||||||||  |||| || || |||| |||||||||||||||||||
Sbjct: 155133 gaccacaactacctcccaaggatagcacctcacttcctcaaatggagggctcag 155186



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 407    catttcgtgaagaacgatgcacaccca 433
              ||||||||||||||||| |||||||||
Sbjct: 142042 catttcgtgaagaacgacgcacaccca 142068



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 471    tggaaggcgcggattgggtgcgccaccgtagg 502
              |||||||||| ||||||||||| || ||||||
Sbjct: 142106 tggaaggcgcagattgggtgcggcatcgtagg 142137

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                       
Query: 158      caagggatccatggaccctcctacaggttcttgaaaggctgcaacgaggacgtga 212
                ||||| |||| ||||||  |||||| |||||||||||||||||| ||||| ||||
Sbjct: 14392629 caaggaatccgtggaccaccctacaagttcttgaaaggctgcaatgaggatgtga 14392683



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                      
Query: 257      gaccacaagtacctcccgcggatcgcgccccactacctcaaatggagggctcag 310
                |||||||| ||||||||  |||| || || |||| |||||||||||||||||||
Sbjct: 14400879 gaccacaactacctcccaaggatagcacctcacttcctcaaatggagggctcag 14400932



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 407      catttcgtgaagaacgatgcacaccca 433
                ||||||||||||||||| |||||||||
Sbjct: 14387788 catttcgtgaagaacgacgcacaccca 14387814



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 211      gaggagcatcaaggaggaga 230
                ||||||||||||||||||||
Sbjct: 22912006 gaggagcatcaaggaggaga 22911987



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 471      tggaaggcgcggattgggtgcgccaccgtagg 502
                |||||||||| ||||||||||| || ||||||
Sbjct: 14387852 tggaaggcgcagattgggtgcggcatcgtagg 14387883

>gb|AC087220.9| Oryza sativa chromosome 3 BAC OSJNBb0097F01 genomic sequence, complete
              sequence
          Length = 135594

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                    
Query: 257    gaccacaagtacctcccgcggatcgcgccccactacctcaaatggagggctcag 310
              |||||||| ||||||||  |||| || || |||| |||||||||||||||||||
Sbjct: 135477 gaccacaactacctcccaaggatagcacctcacttcctcaaatggagggctcag 135424

>dbj|AK069394.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014D12, full
           insert sequence
          Length = 1752

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 177 cctacaggttcttgaaaggctgcaacgaggacgtga 212
           |||||| |||||||||||||||||| ||||| ||||
Sbjct: 168 cctacaagttcttgaaaggctgcaatgaggatgtga 203

>ref|NM_184933.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1850

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 407 catttcgtgaagaacgatgcacaccca 433
           ||||||||||||||||| |||||||||
Sbjct: 364 catttcgtgaagaacgacgcacaccca 390



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 471 tggaaggcgcggattgggtgcgccaccgtagg 502
           |||||||||| ||||||||||| || ||||||
Sbjct: 428 tggaaggcgcagattgggtgcggcatcgtagg 459

>dbj|AK120700.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170M24, full
           insert sequence
          Length = 2167

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 407 catttcgtgaagaacgatgcacaccca 433
           ||||||||||||||||| |||||||||
Sbjct: 399 catttcgtgaagaacgacgcacaccca 425



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 471 tggaaggcgcggattgggtgcgccaccgtagg 502
           |||||||||| ||||||||||| || ||||||
Sbjct: 463 tggaaggcgcagattgggtgcggcatcgtagg 494

>dbj|AK101513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046E16, full
           insert sequence
          Length = 1849

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 407 catttcgtgaagaacgatgcacaccca 433
           ||||||||||||||||| |||||||||
Sbjct: 452 catttcgtgaagaacgacgcacaccca 478



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 471 tggaaggcgcggattgggtgcgccaccgtagg 502
           |||||||||| ||||||||||| || ||||||
Sbjct: 516 tggaaggcgcagattgggtgcggcatcgtagg 547

>emb|AL592487.10| Human DNA sequence from clone RP11-290B1 on chromosome 1, complete
             sequence
          Length = 17462

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    cccatggccttccttgctgtg 46
             |||||||||||||||||||||
Sbjct: 14219 cccatggccttccttgctgtg 14199

>ref|NM_117712.2| Arabidopsis thaliana protein translocase/ protein transporter
           AT4G16160 transcript variant AT4G16160.1 mRNA, complete
           cds
          Length = 744

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 134 gccatgagcaagtggttcag 153
           ||||||||||||||||||||
Sbjct: 470 gccatgagcaagtggttcag 489

>ref|NM_179063.1| Arabidopsis thaliana protein translocase/ protein transporter
           AT4G16160 transcript variant AT4G16160.2 mRNA, complete
           cds
          Length = 762

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 134 gccatgagcaagtggttcag 153
           ||||||||||||||||||||
Sbjct: 488 gccatgagcaagtggttcag 507

>gb|BT011945.1| Arabidopsis thaliana At4g16160 mRNA sequence
          Length = 534

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 134 gccatgagcaagtggttcag 153
           ||||||||||||||||||||
Sbjct: 455 gccatgagcaagtggttcag 474

>gb|AC136972.3| Oryza sativa chromosome 3 BAC OSJNBb0007E22 genomic sequence, complete
              sequence
          Length = 184783

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    gaggagcatcaaggaggaga 230
              ||||||||||||||||||||
Sbjct: 121508 gaggagcatcaaggaggaga 121489

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 52      cctcgttctggttgctctgctcgc 75
               ||||||||||||||| ||||||||
Sbjct: 2058685 cctcgttctggttgcgctgctcgc 2058662

>emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 5
          Length = 209164

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 134    gccatgagcaagtggttcag 153
              ||||||||||||||||||||
Sbjct: 125317 gccatgagcaagtggttcag 125336

>emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 43
          Length = 198226

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 134   gccatgagcaagtggttcag 153
             ||||||||||||||||||||
Sbjct: 94307 gccatgagcaagtggttcag 94326

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 211      gaggagcatcaaggaggaga 230
                ||||||||||||||||||||
Sbjct: 26098702 gaggagcatcaaggaggaga 26098683

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 211      gaggagcatcaaggaggaga 230
                ||||||||||||||||||||
Sbjct: 16067165 gaggagcatcaaggaggaga 16067146

>emb|BX828909.1|CNS0A2JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL50ZA12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 734

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 134 gccatgagcaagtggttcag 153
           ||||||||||||||||||||
Sbjct: 469 gccatgagcaagtggttcag 488

>gb|AY088334.1| Arabidopsis thaliana clone 5714 mRNA, complete sequence
          Length = 741

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 134 gccatgagcaagtggttcag 153
           ||||||||||||||||||||
Sbjct: 471 gccatgagcaagtggttcag 490

>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0038F09
          Length = 166568

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   gaggagcatcaaggaggaga 230
             ||||||||||||||||||||
Sbjct: 37498 gaggagcatcaaggaggaga 37479

>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0040K22
          Length = 155832

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    gaggagcatcaaggaggaga 230
              ||||||||||||||||||||
Sbjct: 148567 gaggagcatcaaggaggaga 148548

>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 127     gccgtacgccatgagcaagt 146
               ||||||||||||||||||||
Sbjct: 1628694 gccgtacgccatgagcaagt 1628675

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 214     gagcatcaaggaggagaccgaccg 237
               ||||||||||||||||| ||||||
Sbjct: 2116778 gagcatcaaggaggagatcgaccg 2116801

>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11,
              complete sequence
          Length = 163039

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    gaggagcatcaaggaggaga 230
              ||||||||||||||||||||
Sbjct: 133029 gaggagcatcaaggaggaga 133010


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,154,341
Number of Sequences: 3902068
Number of extensions: 3154341
Number of successful extensions: 55836
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55581
Number of HSP's gapped (non-prelim): 255
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)