Clone Name	baal40c19
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	646	0.0
2	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	646	0.0
3	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	646	0.0
4	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	646	0.0
5	gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome...	638	e-180
6	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	638	e-180
7	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	638	e-180
8	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	638	e-180
9	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	638	e-180
10	gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom...	638	e-180
11	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	638	e-180
12	emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4,...	638	e-180
13	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	638	e-180
14	gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N...	638	e-180
15	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	638	e-180
16	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	638	e-180
17	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	638	e-180
18	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	638	e-180
19	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	638	e-180
20	gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen...	638	e-180
21	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	638	e-180
22	dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clon...	638	e-180
23	dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clon...	638	e-180
24	dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clon...	638	e-180
25	dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clon...	638	e-180
26	dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clon...	638	e-180
27	dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clon...	638	e-180
28	dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clon...	638	e-180
29	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	638	e-180
30	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	638	e-180
31	dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clon...	636	e-179
32	dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clon...	630	e-177
33	gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genom...	622	e-175
34	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	622	e-175
35	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	615	e-173
36	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	615	e-173
37	emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon	615	e-173
38	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	615	e-173
39	emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa...	615	e-173
40	emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribo...	615	e-173
41	ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothet...	430	e-117
42	dbj|AK058625.1| Oryza sativa (japonica cultivar-group) cDNA clon...	375	e-100
43	gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, parti...	373	e-100
44	gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene,...	373	e-100
45	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	373	e-100
46	dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D...	373	e-100
47	dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clon...	373	e-100
48	dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clon...	373	e-100
49	dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clon...	373	e-100
50	dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clon...	373	e-100
51	dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clon...	373	e-100
52	dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clon...	373	e-100
53	dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clon...	373	e-100
54	dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clon...	373	e-100
55	dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clon...	373	e-100
56	gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome...	357	3e-95
57	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	357	3e-95
58	gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA...	345	1e-91
59	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	345	1e-91
60	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	345	1e-91
61	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	345	1e-91
62	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	343	4e-91
63	gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp...	343	4e-91
64	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	343	4e-91
65	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	343	4e-91
66	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	343	4e-91
67	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	343	4e-91
68	gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-2...	343	4e-91
69	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	343	4e-91
70	dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequen...	343	4e-91
71	gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, com...	343	4e-91
72	gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene...	343	4e-91
73	gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, compl...	343	4e-91
74	gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, comp...	343	4e-91
75	gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete se...	343	4e-91
76	gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, comple...	343	4e-91
77	gb|AY582139.1| Panax ginseng chloroplast, complete genome	343	4e-91
78	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	343	4e-91
79	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	343	4e-91
80	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	343	4e-91
81	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	343	4e-91
82	dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome	343	4e-91
83	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	343	4e-91
84	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	343	4e-91
85	gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes	343	4e-91
86	gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA...	343	4e-91
87	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	341	2e-90
88	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	339	6e-90
89	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	339	6e-90
90	gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, co...	339	6e-90
91	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	339	6e-90
92	emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl...	335	9e-89
93	gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence	335	9e-89
94	gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence	335	9e-89
95	gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complet...	335	9e-89
96	gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, comp...	335	9e-89
97	emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome	335	9e-89
98	gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl...	335	9e-89
99	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	335	9e-89
100	dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome	335	9e-89
101	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	335	9e-89
102	gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5...	329	6e-87
103	gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rr...	325	9e-86
104	gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA ...	325	9e-86
105	dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ...	325	9e-86
106	gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal ...	323	4e-85
107	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	323	4e-85
108	gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosom...	323	4e-85
109	emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single r...	321	1e-84
110	gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA	321	1e-84
111	gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete se...	319	6e-84
112	gb|AC093544.8| Medicago truncatula chloroplast, complete genome,...	319	6e-84
113	emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA	317	2e-83
114	gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA ...	317	2e-83
115	dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, comple...	317	2e-83
116	dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete ge...	317	2e-83
117	dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S rib...	317	2e-83
118	gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete ge...	315	9e-83
119	gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosoma...	315	9e-83
120	emb|X59768.1|CA23SRR C.americana 23S rRNA gene	315	9e-83
121	emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon...	315	9e-83
122	gb|AY660566.1| Huperzia lucidula chloroplast, complete genome	309	5e-81
123	gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl)...	307	2e-80
124	dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete ge...	303	3e-79
125	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	301	1e-78
126	gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (r...	299	5e-78
127	dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome	299	5e-78
128	gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete g...	293	3e-76
129	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	293	3e-76
130	gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, co...	283	3e-73
131	gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete seq...	272	1e-69
132	gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial se...	272	1e-69
133	gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome	262	1e-66
134	gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal...	262	1e-66
135	gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (r...	262	1e-66
136	gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subun...	254	3e-64
137	gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (...	252	1e-63
138	gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal R...	252	1e-63
139	gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RN...	252	1e-63
140	emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5...	250	4e-63
141	gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl...	246	7e-62
142	emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of p...	246	7e-62
143	dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D...	240	4e-60
144	dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic D...	240	4e-60
145	gb|DQ481232.1| Populus suaveolens unknown gene	238	2e-59
146	dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete g...	236	6e-59
147	gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Me...	230	4e-57
148	gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial ...	230	4e-57
149	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	228	2e-56
150	dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic D...	228	2e-56
151	dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic D...	228	2e-56
152	gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subun...	224	2e-55
153	gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (...	220	4e-54
154	gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome	214	2e-52
155	gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subuni...	214	2e-52
156	gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal ...	212	9e-52
157	gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, comple...	212	9e-52
158	dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome	210	4e-51
159	gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence	208	1e-50
160	gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribos...	208	1e-50
161	gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal R...	206	6e-50
162	gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ...	206	6e-50
163	emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ...	206	6e-50
164	gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (...	204	2e-49
165	gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (...	204	2e-49
166	gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl)...	204	2e-49
167	gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome	202	9e-49
168	gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mit...	202	9e-49
169	gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion...	202	9e-49
170	gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subu...	202	9e-49
171	gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion...	202	9e-49
172	gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome	202	9e-49
173	emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast part...	200	4e-48
174	emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA...	200	4e-48
175	gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribos...	200	4e-48
176	gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subu...	198	1e-47
177	gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subu...	198	1e-47
178	gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subu...	198	1e-47
179	gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subu...	198	1e-47
180	gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subu...	198	1e-47
181	gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subu...	198	1e-47
182	gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subu...	198	1e-47
183	gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subun...	198	1e-47
184	gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subun...	198	1e-47
185	gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subun...	198	1e-47
186	gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subun...	198	1e-47
187	gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subun...	198	1e-47
188	emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gen...	196	6e-47
189	gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome...	194	2e-46
190	gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast lar...	194	2e-46
191	gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subun...	192	9e-46
192	gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subu...	190	3e-45
193	gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subun...	190	3e-45
194	gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subu...	190	3e-45
195	emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA ...	190	3e-45
196	emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (...	190	3e-45
197	gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome	190	3e-45
198	gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subun...	188	1e-44
199	gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subu...	188	1e-44
200	emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial se...	188	1e-44
201	gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribo...	182	8e-43
202	gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subuni...	182	8e-43
203	gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rr...	182	8e-43
204	gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosoma...	178	1e-41
205	gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ...	176	5e-41
206	gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit rib...	176	5e-41
207	gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA g...	174	2e-40
208	gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene...	174	2e-40
209	gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene,...	174	2e-40
210	gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RN...	174	2e-40
211	gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosoma...	174	2e-40
212	emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome;...	174	2e-40
213	emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;...	174	2e-40
214	gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA...	174	2e-40
215	gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal...	170	3e-39
216	gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit r...	170	3e-39
217	gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA...	167	5e-38
218	gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S riboso...	167	5e-38
219	gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosom...	167	5e-38
220	gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA ge...	167	5e-38
221	gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S riboso...	167	5e-38
222	gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple...	167	5e-38
223	gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA...	167	5e-38
224	gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete se...	167	5e-38
225	gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome	167	5e-38
226	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	167	5e-38
227	gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit riboso...	167	5e-38
228	gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal ...	167	5e-38
229	gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rr...	167	5e-38
230	gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (...	167	5e-38
231	dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome	167	5e-38
232	gb|AF041468.1| Guillardia theta complete plastid genome	167	5e-38
233	gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1...	167	5e-38
234	emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (...	167	5e-38
235	emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene ...	161	3e-36
236	gb|CP000110.1| Synechococcus sp. CC9605, complete genome	159	1e-35
237	gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, p...	159	1e-35
238	gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, p...	159	1e-35
239	gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA...	159	1e-35
240	gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosom...	159	1e-35
241	gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, pa...	159	1e-35
242	emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen...	159	1e-35
243	gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-...	159	1e-35
244	dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g...	159	1e-35
245	gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA...	159	1e-35
246	gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA...	159	1e-35
247	gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA...	159	1e-35
248	gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA...	159	1e-35
249	gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA...	159	1e-35
250	gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA...	159	1e-35
251	gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA...	159	1e-35
252	gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RN...	159	1e-35
253	gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ri...	159	1e-35
254	dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome	159	1e-35
255	dbj|AB181958.1| Heterosigma akashiwo chloroplast genes for 16S r...	159	1e-35
256	dbj|AB181957.1| Heterosigma akashiwo chloroplast genes for 16S r...	159	1e-35
257	dbj|AB181956.1| Heterosigma akashiwo chloroplast genes for 16S r...	159	1e-35
258	emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flankin...	159	1e-35
259	gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome	159	1e-35
260	gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete g...	157	5e-35
261	gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large ...	157	5e-35
262	gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subun...	157	5e-35
263	gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit riboso...	157	5e-35
264	dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complet...	157	5e-35
265	gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ri...	153	7e-34
266	dbj|AB181955.1| Heterosigma akashiwo chloroplast genes for 16S r...	153	7e-34
267	emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Il...	153	7e-34
268	gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g...	151	3e-33
269	gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, ...	151	3e-33
270	gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S riboso...	151	3e-33
271	gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S riboso...	151	3e-33
272	gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, ...	151	3e-33
273	gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 ...	151	3e-33
274	gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150...	151	3e-33
275	emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se...	151	3e-33
276	gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, co...	151	3e-33
277	gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast larg...	151	3e-33
278	gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit riboso...	151	3e-33
279	gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal ...	151	3e-33
280	emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL ...	151	3e-33
281	emb|AL606659.3|OSJN00108 Oryza sativa genomic DNA, chromosome 4,...	149	1e-32
282	emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4,...	149	1e-32
283	gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosoma...	149	1e-32
284	gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (...	149	1e-32
285	gb|DQ313018.1| Uncultured bacterium clone 3P12F 23S ribosomal RN...	147	5e-32
286	gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplas...	147	5e-32
287	gb|CP000097.1| Synechococcus sp. CC9902, complete genome	143	7e-31
288	gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosoma...	143	7e-31
289	gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, compl...	143	7e-31
290	gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal ...	143	7e-31
291	gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosoma...	143	7e-31
292	emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast g...	143	7e-31
293	gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-...	143	7e-31
294	gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast ...	143	7e-31
295	gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-s...	143	7e-31
296	gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA...	143	7e-31
297	gb|DQ312920.1| Uncultured bacterium clone 3M10C 23S ribosomal RN...	143	7e-31
298	gb|DQ312633.1| Uncultured bacterium clone 3C6G 23S ribosomal RNA...	143	7e-31
299	gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast l...	143	7e-31
300	gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit rib...	143	7e-31
301	gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit riboso...	143	7e-31
302	gb|L42847.1|MIQCPRGOL Micromonas pusilla large subunit ribosomal...	143	7e-31
303	gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribo...	143	7e-31
304	gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosom...	143	7e-31
305	gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal R...	143	7e-31
306	emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (p...	143	7e-31
307	emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL ...	143	7e-31
308	emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL g...	143	7e-31
309	dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complet...	143	7e-31
310	gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA ...	137	4e-29
311	gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete g...	137	4e-29
312	gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast,...	135	2e-28
313	gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosoma...	135	2e-28
314	gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene,...	135	2e-28
315	gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome	135	2e-28
316	gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large s...	135	2e-28
317	dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome	135	2e-28
318	emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA ge...	135	2e-28
319	gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA g...	135	2e-28
320	dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete...	133	7e-28
321	gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-su...	131	3e-27
322	gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit riboso...	131	3e-27
323	gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit rib...	131	3e-27
324	gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete g...	129	1e-26
325	gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large ...	127	4e-26
326	gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large ...	127	4e-26
327	gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large s...	127	4e-26
328	gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large sub...	127	4e-26
329	gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large sub...	127	4e-26
330	gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large ...	127	4e-26
331	tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloropl...	127	4e-26
332	emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL g...	127	4e-26
333	emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL ge...	127	4e-26
334	emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL g...	127	4e-26
335	emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene...	127	4e-26
336	emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL g...	127	4e-26
337	emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene...	127	4e-26
338	emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and ...	127	4e-26
339	emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrn...	127	4e-26
340	gb|K01977.1|CRECPARSC C.reinhardtii chloroplast autonomously rep...	127	4e-26
341	gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribos...	125	2e-25
342	gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence	125	2e-25
343	emb|AJ879836.1| Uncultured organism 23S rRNA gene, clone LP4-6A	123	7e-25
344	gb|L43500.1|RTCCPRRNL Carteria olivieri	121	3e-24
345	gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribo...	121	3e-24
346	gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large...	119	1e-23
347	emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL ...	119	1e-23
348	gb|AY744382.1| Buchnera aphidicola (Cinara cedri) genomic sequence	119	1e-23
349	gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-sub...	117	4e-23
350	gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-...	117	4e-23
351	gb|L44123.1|CMJCPRGOL Chlorococcum echinozygotum chloroplast lar...	117	4e-23
352	gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-su...	111	3e-21
353	gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large s...	111	3e-21
354	gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum)...	111	3e-21
355	gb|U09230.1|BAU09230 Buchnera aphidicola shikimate dehydrogenase...	111	3e-21
356	emb|X68913.1|CHCMRRNX1 Chloroplast C.moewusii rrnL gene, exon 1	111	3e-21
357	gb|L42986.1|RTCCPRGOLA Carteria lunzensis	109	1e-20
358	gb|AF129500.1|AF129500 Buchnera aphidicola natural-host Melaphis...	103	6e-19
359	gb|AF129499.1|AF129499 Buchnera aphidicola natural-host Schlecht...	103	6e-19
360	gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, ...	103	6e-19
361	gb|AY389861.1| Uncultured chlorophyte large subunit ribosomal RN...	101	2e-18
362	emb|X68894.1|CHCIRRNX2 Chloroplast Chlamydomonas indica rrnL gen...	101	2e-18
363	emb|Z17234.1|CHCERRNL Chloroplast Chlamydomonas eugametos rrnL gene	101	2e-18
364	gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloropla...	100	1e-17
365	gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large s...	100	1e-17
366	gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-...	100	1e-17
367	emb|AL731620.2|OSJN00270 Oryza sativa genomic DNA, chromosome 4,...	100	1e-17
368	emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmati...	100	1e-17
369	emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL ge...	100	1e-17
370	gb|DQ312807.1| Uncultured bacterium clone 3H7H 23S ribosomal RNA...	98	4e-17
371	gb|DQ312770.1| Uncultured bacterium clone 3G9G 23S ribosomal RNA...	98	4e-17
372	gb|DQ312676.1| Uncultured bacterium clone 3D7H 23S ribosomal RNA...	98	4e-17
373	emb|AJ294422.1|VME294422 Vibrio mediterranei 23S rRNA gene, stra...	98	4e-17
374	emb|AJ310650.1|VAG310650 Vibrio agarivorans 23S rRNA gene, strai...	98	4e-17
375	emb|AJ310649.1|VAG310649 Vibrio agarivorans 23S rRNA gene, strai...	98	4e-17
376	gb|CP000021.1| Vibrio fischeri ES114 chromosome II, complete seq...	98	4e-17
377	gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ...	98	4e-17
378	emb|AL731875.2|CNS08C8F Oryza sativa chromosome 12, . BAC OJ1060...	98	4e-17
379	gb|AE004341.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom...	96	2e-16
380	gb|AE004319.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom...	96	2e-16
381	gb|AE004157.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom...	96	2e-16
382	gb|AE004126.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom...	96	2e-16
383	gb|AE004119.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom...	96	2e-16
384	gb|AE004106.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom...	96	2e-16
385	gb|AE004097.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom...	96	2e-16
386	gb|AF548141.1| Primary endosymbiont of Sitophilus zeamais 16S-23...	96	2e-16
387	gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq...	96	2e-16
388	gb|AF208650.1| Pantoea oleae strain 66 23S ribosomal RNA gene, p...	96	2e-16
389	gb|AF208649.1| Pantoea oleae strain 36 23S ribosomal RNA gene, p...	96	2e-16
390	gb|AF208648.1| Pantoea oleae strain 36 23S ribosomal RNA gene, p...	96	2e-16
391	emb|CR378680.1| Photobacterium profundum SS9 chromosome 2; segme...	96	2e-16
392	emb|Y18520.1|PDA18520 Photobacterium damselae 23S rRNA gene, sub...	96	2e-16
393	emb|Y17901.1|PDA17901 Photobacterium damsela subsp. piscicida 23...	96	2e-16
394	gb|AF476108.1| Secondary endosymbiont of Planococcus ficus 16S r...	96	2e-16
395	gb|AF476107.1| Secondary endosymbiont of Planococcus citri 16S r...	96	2e-16
396	dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo...	96	2e-16
397	dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, comp...	96	2e-16
398	dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl...	96	2e-16
399	gb|DQ313075.1| Uncultured bacterium clone 3R12E 23S ribosomal RN...	96	2e-16
400	gb|DQ313023.1| Uncultured bacterium clone 3P1G 23S ribosomal RNA...	96	2e-16
401	gb|DQ312933.1| Uncultured bacterium clone 3M1H 23S ribosomal RNA...	96	2e-16
402	gb|DQ312818.1| Uncultured bacterium clone 3I1H 23S ribosomal RNA...	96	2e-16
403	gb|DQ312753.1| Uncultured bacterium clone 3G3C 23S ribosomal RNA...	96	2e-16
404	gb|DQ312640.1| Uncultured bacterium clone 3C8E 23S ribosomal RNA...	96	2e-16
405	gb|DQ312610.1| Uncultured bacterium clone 3C1C 23S ribosomal RNA...	96	2e-16
406	dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo...	96	2e-16
407	dbj|BA000003.2| Buchnera aphidicola str. APS (Acyrthosiphon pisu...	96	2e-16
408	emb|AJ294425.1|VSP294425 Vibrio splendidus 23S rRNA gene, strain...	96	2e-16
409	emb|AJ294424.1|VPE294424 Vibrio pelagius 23S rRNA gene, strain C...	96	2e-16
410	emb|AJ294423.1|VNA294423 Vibrio navarrensis 23S rRNA gene, strai...	96	2e-16
411	emb|AJ294421.1|VLE294421 Vibrio lentus 23S rRNA gene, strain 4OM...	96	2e-16
412	emb|AJ294420.1|VLE294420 Vibrio lentus 23S rRNA gene, strain 3OM...	96	2e-16
413	gb|AF129498.1|AF129498 Buchnera aphidicola natural-host Diuraphi...	96	2e-16
414	gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete s...	96	2e-16
415	dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Gloss...	96	2e-16
416	emb|X87294.1|VV23S2138 V.vulnificus 23S rRNA gene, biotype 2	96	2e-16
417	emb|X87293.1|VV23S2756 V.vulnificus 23S rRNA gene, biotype 1	96	2e-16
418	gb|U10951.1|VVU10951 Vibrio vulnificus ATCC 27562 23S rRNA gene,...	96	2e-16
419	gb|CP000141.1| Carboxydothermus hydrogenoformans Z-2901, complet...	92	2e-15
420	gb|CP000238.1| Baumannia cicadellinicola str. Hc (Homalodisca co...	92	2e-15
421	gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast lar...	92	2e-15
422	gb|AF489427.1| Baumannia cicadellinicola 16S ribosomal RNA gene,...	92	2e-15
423	gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ...	90	9e-15
424	gb|AE006130.1| Pasteurella multocida subsp. multocida str. Pm70 ...	90	9e-15
425	gb|AE006082.1| Pasteurella multocida subsp. multocida str. Pm70 ...	90	9e-15
426	gb|AE006209.1| Pasteurella multocida subsp. multocida str. Pm70 ...	90	9e-15
427	gb|AE006193.1| Pasteurella multocida subsp. multocida str. Pm70 ...	90	9e-15
428	gb|AE006186.1| Pasteurella multocida subsp. multocida str. Pm70 ...	90	9e-15
429	gb|AE006065.1| Pasteurella multocida subsp. multocida str. Pm70 ...	90	9e-15
430	gb|AF476110.1| Secondary endosymbiont of Vryburgia amaryllidis 1...	90	9e-15
431	gb|AC005397.3| Arabidopsis thaliana chromosome 2 clone T3F17 map...	90	9e-15
432	gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome	90	9e-15
433	gb|AF031936.1|AF031936 Pasteurella haemolytica 16S-23S intergeni...	90	9e-15
434	gb|L42023.1| Haemophilus influenzae Rd KW20, complete genome	90	9e-15
435	gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome	88	4e-14
436	gb|AE017127.1| Yersinia pestis biovar Medievalis str. 91001 sect...	88	4e-14
437	gb|AY432508.1| Aedes aegypti ASAP ID: 35071 unknown mRNA sequence	88	4e-14
438	gb|AE017138.1| Yersinia pestis biovar Medievalis str. 91001 sect...	88	4e-14
439	gb|AE017137.1| Yersinia pestis biovar Medievalis str. 91001 sect...	88	4e-14
440	gb|AE017139.1| Yersinia pestis biovar Medievalis str. 91001 sect...	88	4e-14
441	gb|AE017129.1| Yersinia pestis biovar Medievalis str. 91001 sect...	88	4e-14
442	gb|AY116931.1| Klebsiella pneumoniae strain ATCC 15830 23S ribos...	88	4e-14
443	gb|AY116929.1| Proteus mirabilis strain ATCC 29906 23S ribosomal...	88	4e-14
444	gb|AY116927.1| Proteus vulgaris strain ATCC 13315 23S ribosomal ...	88	4e-14
445	gb|AY116909.1| Morganella morganii strain ATCC 25830 23S ribosom...	88	4e-14
446	gb|AE009952.1| Yersinia pestis KIM, complete genome	88	4e-14
447	gb|AY587141.1| Arsenophonus endosymbiont of Aleyrodes proletella...	88	4e-14
448	gb|AY587140.1| Arsenophonus endosymbiont of Trialeurodes hutchin...	88	4e-14
449	gb|AY264677.1| Arsenophonus endosymbiont of Bemisia sp. 16S ribo...	88	4e-14
450	gb|AY264674.1| Arsenophonus nasoniae 16S ribosomal RNA gene, par...	88	4e-14
451	gb|AY264673.1| Arsenophonus endosymbiont of Australiococcus grev...	88	4e-14
452	gb|AY264672.1| Arsenophonus endosymbiont of Trialeurodes vaporar...	88	4e-14
453	gb|AY264670.1| Arsenophonus endosymbiont of Tetraleurodes acacia...	88	4e-14
454	gb|AY264669.1| Arsenophonus endosymbiont of Siphoninus phillyrea...	88	4e-14
455	gb|AY264668.1| Arsenophonus endosymbiont of Neomaskellia andropo...	88	4e-14
456	gb|AY264667.1| Arsenophonus endosymbiont of Dialeurodes hongkong...	88	4e-14
457	gb|AY264666.1| Arsenophonus endosymbiont of Aleyrodes elevatus 1...	88	4e-14
458	gb|AY264665.1| Arsenophonus endosymbiont of Aleuroplatus gelatin...	88	4e-14
459	gb|AY264663.1| Arsenophonus endosymbiont of Acanthaleyrodes styr...	88	4e-14
460	emb|X65487.1|PS23SRRN P.shigelloides gene for 23S rRNA	88	4e-14
461	gb|AF548140.1| Primary endosymbiont of Sitophilus zeamais 16S-23...	88	4e-14
462	gb|AF548139.1| Primary endosymbiont of Sitophilus oryzae 16S-23S...	88	4e-14
463	gb|AF548138.1| Primary endosymbiont of Sitophilus oryzae 16S-23S...	88	4e-14
464	gb|AF548136.1| Sodalis glossinidius 16S-23S ribosomal RNA (rrnB)...	88	4e-14
465	gb|AF548135.1| Sodalis glossinidius 16S-23S ribosomal RNA (rrnA)...	88	4e-14
466	gb|AE014075.1| Escherichia coli CFT073, complete genome	88	4e-14
467	gb|CP000243.1| Escherichia coli UTI89, complete genome	88	4e-14
468	gb|U00096.2| Escherichia coli K-12 MG1655, complete genome	88	4e-14
469	gb|U00006.1|ECOUW89 E. coli chromosomal region from 89.2 to 92.8...	88	4e-14
470	gb|AF208645.1| Pantoea toletana strain 37 23S ribosomal RNA gene...	88	4e-14
471	gb|AF208644.1| Pantoea toletana strain 37 23S ribosomal RNA gene...	88	4e-14
472	emb|CR378674.1| Photobacterium profundum SS9; segment 12/12	88	4e-14
473	emb|CR378673.1| Photobacterium profundum SS9; segment 11/12	88	4e-14
474	emb|CR378672.1| Photobacterium profundum SS9; segment 10/12	88	4e-14
475	emb|CR378665.1| Photobacterium profundum SS9; segment 3/12	88	4e-14
476	emb|CR378664.1| Photobacterium profundum SS9; segment 2/12	88	4e-14
477	emb|CR378663.1| Photobacterium profundum SS9; segment 1/12	88	4e-14
478	emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ...	88	4e-14
479	emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, comp...	88	4e-14
480	emb|BX248586.1| Blochmannia floridanus complete genome; segment 3/3	88	4e-14
481	emb|AJ414159.1| Yersinia pestis strain CO92 complete genome; seg...	88	4e-14
482	emb|AJ414158.1| Yersinia pestis strain CO92 complete genome; seg...	88	4e-14
483	emb|AJ414156.1| Yersinia pestis strain CO92 complete genome; seg...	88	4e-14
484	emb|AJ414146.1| Yersinia pestis strain CO92 complete genome; seg...	88	4e-14
485	emb|AJ414141.1| Yersinia pestis strain CO92 complete genome; seg...	88	4e-14
486	gb|AY793988.1| Uncultured organism clone SIMO3-M13F_H12 unknown ...	88	4e-14
487	gb|AF476106.1| Secondary endosymbiont of Melanococcus albizziae ...	88	4e-14
488	gb|AF476101.1| Secondary endosymbiont of Antonina pretiosa 16S r...	88	4e-14
489	gb|AF476100.1| Secondary endosymbiont of Amonostherium lichtensi...	88	4e-14
490	gb|AF476099.1| Secondary endosymbiont of Australicoccus greville...	88	4e-14
491	dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome	88	4e-14
492	dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl...	88	4e-14
493	gb|AE016826.1| Buchnera aphidicola str. Bp (Baizongia pistaciae)...	88	4e-14
494	gb|AF263562.1| Secondary endosymbiont of Heteropsylla texana 16S...	88	4e-14
495	gb|AF263558.1| Secondary endosymbiont of Blastopsylla occidental...	88	4e-14
496	gb|AF263556.1| Secondary endosymbiont of Aphalaroida inermis 16S...	88	4e-14
497	gb|AF369905.1|AF369905 Serratia marcescens 23S ribosomal RNA gen...	88	4e-14
498	gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome	88	4e-14
499	emb|AJ278710.1|ECO278710 Escherichia coli 23S rRNA gene, strain ...	88	4e-14
500	emb|V00348.1|ECRRNBZ E. coli ribosomal operon rrnB encoding the ...	88	4e-14

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  646 bits (326), Expect = 0.0
 Identities = 332/334 (99%)
 Strand = Plus / Plus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43153 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 43212

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43213 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 43272

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43273 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 43332

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43333 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 43392

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43393 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 43452

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 43453 aaggggtagtacaggaatattgacctgttgtcca 43486



 Score =  646 bits (326), Expect = 0.0
 Identities = 332/334 (99%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21964 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 21905

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21904 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 21845

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21844 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 21785

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21784 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 21725

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21724 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 21665

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 21664 aaggggtagtacaggaatattgacctgttgtcca 21631



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20964 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 21023

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 21024 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 21083

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 21084 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 21143

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 21144 gaggcaaactctgaatactagatatgacccaa 21175



 Score =  351 bits (177), Expect = 2e-93
 Identities = 203/213 (95%), Gaps = 1/213 (0%)
 Strand = Plus / Minus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg- 418
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 44154 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgt 44095

                                                                         
Query: 419   aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagn 478
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| 
Sbjct: 44094 aaatgccactcgaacccagagctagttggttctccccgaaatgcgttgaggcgcagcagt 44035

                                                                         
Query: 479   tgactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaan 538
             |||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| 
Sbjct: 44034 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 43975

                                              
Query: 539   cnaggcaaactctgaatactanatatgacccaa 571
             | ||||||||||||||||||| |||||||||||
Sbjct: 43974 cgaggcaaactctgaatactagatatgacccaa 43942

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  646 bits (326), Expect = 0.0
 Identities = 332/334 (99%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121993 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 122052

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122053 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 122112

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122113 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 122172

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122173 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 122232

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122233 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 122292

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 122293 aaggggtagtacaggaatattgacctgttgtcca 122326



 Score =  646 bits (326), Expect = 0.0
 Identities = 332/334 (99%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100844 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 100785

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100784 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 100725

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100724 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 100665

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100664 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 100605

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100604 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 100545

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 100544 aaggggtagtacaggaatattgacctgttgtcca 100511



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122993 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 122934

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 122933 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 122874

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 122873 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 122814

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 122813 gaggcaaactctgaatactagatatgacccaa 122782



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99844  agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 99903

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 99904  aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 99963

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 99964  gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 100023

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 100024 gaggcaaactctgaatactagatatgacccaa 100055

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  646 bits (326), Expect = 0.0
 Identities = 332/334 (99%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122710 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 122769

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122770 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 122829

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122830 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 122889

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122890 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 122949

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122950 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 123009

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 123010 aaggggtagtacaggaatattgacctgttgtcca 123043



 Score =  646 bits (326), Expect = 0.0
 Identities = 332/334 (99%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101521 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 101462

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101461 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 101402

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101401 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 101342

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101341 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 101282

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101281 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 101222

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 101221 aaggggtagtacaggaatattgacctgttgtcca 101188



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123710 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 123651

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 123650 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 123591

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 123590 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 123531

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 123530 gaggcaaactctgaatactagatatgacccaa 123499



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100521 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 100580

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 100581 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 100640

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 100641 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 100700

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 100701 gaggcaaactctgaatactagatatgacccaa 100732

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  646 bits (326), Expect = 0.0
 Identities = 332/334 (99%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118329 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 118388

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 118389 tcctgggagtatggcatcagttacatacttcagcgccgtagcgcctggtatgagcctcgt 118448

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118449 ggagaagcaatcgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 118508

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118509 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 118568

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118569 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 118628

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 118629 aaggggtagtacaggaatattgacctgttgtcca 118662



 Score =  646 bits (326), Expect = 0.0
 Identities = 332/334 (99%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96565 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 96506

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 96505 tcctgggagtatggcatcagttacatacttcagcgccgtagcgcctggtatgagcctcgt 96446

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96445 ggagaagcaatcgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 96386

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96385 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 96326

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96325 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 96266

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 96265 aaggggtagtacaggaatattgacctgttgtcca 96232



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119329 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119270

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 119269 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119210

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 119209 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 119150

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 119149 gaggcaaactctgaatactagatatgacccaa 119118



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95565 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 95624

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 95625 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 95684

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 95685 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 95744

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 95745 gaggcaaactctgaatactagatatgacccaa 95776

---

>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11,
              complete sequence
          Length = 120228

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 117110 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 117169

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117170 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 117229

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117230 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 117289

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117290 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 117349

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117350 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 117409

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 117410 aaggggtagtacaggaatattgacctgttgtcca 117443



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118110 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 118051

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 118050 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 117991

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 117990 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 117931

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 117930 gaggcaaactctgaatactagatatgacccaa 117899

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
              complete genome
          Length = 134551

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118194 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 118253

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118254 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 118313

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118314 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 118373

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118374 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 118433

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118434 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 118493

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 118494 aaggggtagtacaggaatattgacctgttgtcca 118527



 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96962 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 96903

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96902 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 96843

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96842 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 96783

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96782 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 96723

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96722 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 96663

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 96662 aaggggtagtacaggaatattgacctgttgtcca 96629



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119194 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119135

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 119134 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119075

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 119074 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 119015

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 119014 gaggcaaactctgaatactagatatgacccaa 118983



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95962 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 96021

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 96022 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96081

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 96082 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96141

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 96142 gaggcaaactctgaatactagatatgacccaa 96173

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
              complete genome
          Length = 134551

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118194 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 118253

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118254 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 118313

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118314 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 118373

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118374 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 118433

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118434 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 118493

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 118494 aaggggtagtacaggaatattgacctgttgtcca 118527



 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96962 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 96903

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96902 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 96843

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96842 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 96783

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96782 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 96723

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96722 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 96663

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 96662 aaggggtagtacaggaatattgacctgttgtcca 96629



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119194 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119135

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 119134 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119075

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 119074 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 119015

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 119014 gaggcaaactctgaatactagatatgacccaa 118983



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95962 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 96021

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 96022 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96081

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 96082 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96141

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 96142 gaggcaaactctgaatactagatatgacccaa 96173

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete
              genome
          Length = 134496

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118143 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 118202

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118203 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 118262

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118263 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 118322

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118323 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 118382

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118383 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 118442

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 118443 aaggggtagtacaggaatattgacctgttgtcca 118476



 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96907 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 96848

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96847 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 96788

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96787 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 96728

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96727 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 96668

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96667 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 96608

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 96607 aaggggtagtacaggaatattgacctgttgtcca 96574



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119143 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119084

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 119083 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119024

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 119023 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 118964

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 118963 gaggcaaactctgaatactagatatgacccaa 118932



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95907 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 95966

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 95967 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96026

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 96027 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96086

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 96087 gaggcaaactctgaatactagatatgacccaa 96118

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                            
Query: 2        ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 31509540 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 31509481

                                                                            
Query: 62       tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509480 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 31509421

                                                                            
Query: 122      ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509420 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 31509361

                                                                            
Query: 182      acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509360 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 31509301

                                                                            
Query: 242      gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509300 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 31509241

                                                  
Query: 302      aaggggtagtacaggaatattgacctgttgtcca 335
                ||||||||||||||||||||||||||||||||||
Sbjct: 31509240 aaggggtagtacaggaatattgacctgttgtcca 31509207



 Score =  622 bits (314), Expect = e-175
 Identities = 329/334 (98%)
 Strand = Plus / Plus

                                                                            
Query: 2        ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 27320010 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 27320069

                                                                            
Query: 62       tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27320070 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 27320129

                                                                            
Query: 122      ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
                ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 27320130 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagtgcttggtactcgg 27320189

                                                                            
Query: 182      acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
                |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 27320190 acctcggctcgaggcattttttctaccccttcttaccctgaaaaagcagggtcaccttgt 27320249

                                                                            
Query: 242      gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27320250 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 27320309

                                                  
Query: 302      aaggggtagtacaggaatattgacctgttgtcca 335
                ||||||||||||||||||||||||||||||||||
Sbjct: 27320310 aaggggtagtacaggaatattgacctgttgtcca 27320343



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                            
Query: 360      agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31508540 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 31508599

                                                                            
Query: 420      aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 31508600 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 31508659

                                                                            
Query: 480      gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
                ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 31508660 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 31508719

                                                
Query: 540      naggcaaactctgaatactanatatgacccaa 571
                 ||||||||||||||||||| |||||||||||
Sbjct: 31508720 gaggcaaactctgaatactagatatgacccaa 31508751

---

>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
             sequence
          Length = 133449

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Plus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 83056 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 83115

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83116 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 83175

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83176 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 83235

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83236 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 83295

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83296 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 83355

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 83356 aaggggtagtacaggaatattgacctgttgtcca 83389



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84056 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 83997

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 83996 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 83937

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 83936 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 83877

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 83876 gaggcaaactctgaatactagatatgacccaa 83845

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
              complete sequence
          Length = 145980

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 124003 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 123944

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123943 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 123884

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123883 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 123824

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123823 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 123764

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123763 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 123704

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 123703 aaggggtagtacaggaatattgacctgttgtcca 123670



 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 15729 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 15670

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15669 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 15610

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15609 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 15550

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15549 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 15490

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15489 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 15430

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 15429 aaggggtagtacaggaatattgacctgttgtcca 15396



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123003 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 123062

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 123063 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 123122

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 123123 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 123182

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 123183 gaggcaaactctgaatactagatatgacccaa 123214



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14729 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 14788

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 14789 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 14848

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 14849 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 14908

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 14909 gaggcaaactctgaatactagatatgacccaa 14940

---

>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21,
              complete sequence
          Length = 167113

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 142537 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 142478

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142477 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 142418

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142417 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 142358

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142357 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 142298

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142297 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 142238

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 142237 aaggggtagtacaggaatattgacctgttgtcca 142204



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141537 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 141596

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 141597 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 141656

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 141657 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 141716

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 141717 gaggcaaactctgaatactagatatgacccaa 141748

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 95133 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 95074

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95073 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 95014

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95013 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 94954

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94953 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 94894

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94893 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 94834

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 94833 aaggggtagtacaggaatattgacctgttgtcca 94800



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94133 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 94192

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 94193 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 94252

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 94253 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 94312

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 94313 gaggcaaactctgaatactagatatgacccaa 94344

---

>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Plus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 56882 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 56941

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56942 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 57001

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57002 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 57061

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57062 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 57121

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57122 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 57181

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 57182 aaggggtagtacaggaatattgacctgttgtcca 57215



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57882 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 57823

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 57822 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 57763

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 57762 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 57703

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 57702 gaggcaaactctgaatactagatatgacccaa 57671

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 29197 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 29138

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29137 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 29078

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29077 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 29018

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 29017 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 28958

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28957 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 28898

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 28897 aaggggtagtacaggaatattgacctgttgtcca 28864



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28197 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 28256

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 28257 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 28316

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 28317 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 28376

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 28377 gaggcaaactctgaatactagatatgacccaa 28408

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                           
Query: 2       ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9269889 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 9269830

                                                                           
Query: 62      tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269829 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 9269770

                                                                           
Query: 122     ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
               ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269769 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 9269710

                                                                           
Query: 182     acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269709 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 9269650

                                                                           
Query: 242     gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269649 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 9269590

                                                 
Query: 302     aaggggtagtacaggaatattgacctgttgtcca 335
               ||||||||||||||||||||||||||||||||||
Sbjct: 9269589 aaggggtagtacaggaatattgacctgttgtcca 9269556



 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                           
Query: 2       ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9229389 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 9229330

                                                                           
Query: 62      tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9229329 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 9229270

                                                                           
Query: 122     ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
               ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9229269 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 9229210

                                                                           
Query: 182     acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9229209 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 9229150

                                                                           
Query: 242     gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9229149 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 9229090

                                                 
Query: 302     aaggggtagtacaggaatattgacctgttgtcca 335
               ||||||||||||||||||||||||||||||||||
Sbjct: 9229089 aaggggtagtacaggaatattgacctgttgtcca 9229056



 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                           
Query: 2       ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9165977 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 9165918

                                                                           
Query: 62      tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165917 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 9165858

                                                                           
Query: 122     ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
               ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165857 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 9165798

                                                                           
Query: 182     acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165797 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 9165738

                                                                           
Query: 242     gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165737 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 9165678

                                                 
Query: 302     aaggggtagtacaggaatattgacctgttgtcca 335
               ||||||||||||||||||||||||||||||||||
Sbjct: 9165677 aaggggtagtacaggaatattgacctgttgtcca 9165644



 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                           
Query: 2       ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9057803 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 9057744

                                                                           
Query: 62      tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057743 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 9057684

                                                                           
Query: 122     ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
               ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057683 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 9057624

                                                                           
Query: 182     acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057623 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 9057564

                                                                           
Query: 242     gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057563 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 9057504

                                                 
Query: 302     aaggggtagtacaggaatattgacctgttgtcca 335
               ||||||||||||||||||||||||||||||||||
Sbjct: 9057503 aaggggtagtacaggaatattgacctgttgtcca 9057470



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                           
Query: 360     agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9268889 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9268948

                                                                           
Query: 420     aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9268949 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9269008

                                                                           
Query: 480     gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
               ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 9269009 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9269068

                                               
Query: 540     naggcaaactctgaatactanatatgacccaa 571
                ||||||||||||||||||| |||||||||||
Sbjct: 9269069 gaggcaaactctgaatactagatatgacccaa 9269100



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                           
Query: 360     agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9228389 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9228448

                                                                           
Query: 420     aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9228449 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9228508

                                                                           
Query: 480     gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
               ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 9228509 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9228568

                                               
Query: 540     naggcaaactctgaatactanatatgacccaa 571
                ||||||||||||||||||| |||||||||||
Sbjct: 9228569 gaggcaaactctgaatactagatatgacccaa 9228600



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                           
Query: 360     agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9164977 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9165036

                                                                           
Query: 420     aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9165037 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9165096

                                                                           
Query: 480     gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
               ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 9165097 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9165156

                                               
Query: 540     naggcaaactctgaatactanatatgacccaa 571
                ||||||||||||||||||| |||||||||||
Sbjct: 9165157 gaggcaaactctgaatactagatatgacccaa 9165188



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                           
Query: 360     agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9056803 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 9056862

                                                                           
Query: 420     aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9056863 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9056922

                                                                           
Query: 480     gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
               ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 9056923 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9056982

                                               
Query: 540     naggcaaactctgaatactanatatgacccaa 571
                ||||||||||||||||||| |||||||||||
Sbjct: 9056983 gaggcaaactctgaatactagatatgacccaa 9057014



 Score =  149 bits (75), Expect = 1e-32
 Identities = 93/99 (93%)
 Strand = Plus / Minus

                                                                            
Query: 90       ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 149
                ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||| ||||
Sbjct: 25661870 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 25661811

                                                       
Query: 150      catacttcagcgctgcagcgcttggtactcggacctcgg 188
                ||||||||||||| ||||||||||||||||| |||||||
Sbjct: 25661810 catacttcagcgccgcagcgcttggtactcgaacctcgg 25661772



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 56/58 (96%)
 Strand = Plus / Minus

                                                                         
Query: 249     aacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggg 306
               ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 5792222 aacctataaccatcttttggctaacctagcctcctccgtccctccgtaccaataaggg 5792165

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                            
Query: 2        ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 19939874 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 19939815

                                                                            
Query: 62       tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939814 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 19939755

                                                                            
Query: 122      ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939754 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 19939695

                                                                            
Query: 182      acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939694 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 19939635

                                                                            
Query: 242      gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939634 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 19939575

                                                  
Query: 302      aaggggtagtacaggaatattgacctgttgtcca 335
                ||||||||||||||||||||||||||||||||||
Sbjct: 19939574 aaggggtagtacaggaatattgacctgttgtcca 19939541



 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                            
Query: 2        ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10388741 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 10388682

                                                                            
Query: 62       tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388681 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 10388622

                                                                            
Query: 122      ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388621 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 10388562

                                                                            
Query: 182      acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388561 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 10388502

                                                                            
Query: 242      gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388501 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 10388442

                                                  
Query: 302      aaggggtagtacaggaatattgacctgttgtcca 335
                ||||||||||||||||||||||||||||||||||
Sbjct: 10388441 aaggggtagtacaggaatattgacctgttgtcca 10388408



 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Plus

                                                                            
Query: 2        ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10275557 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 10275616

                                                                            
Query: 62       tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10275617 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 10275676

                                                                            
Query: 122      ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10275677 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 10275736

                                                                            
Query: 182      acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10275737 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 10275796

                                                                            
Query: 242      gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10275797 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 10275856

                                                  
Query: 302      aaggggtagtacaggaatattgacctgttgtcca 335
                ||||||||||||||||||||||||||||||||||
Sbjct: 10275857 aaggggtagtacaggaatattgacctgttgtcca 10275890



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                            
Query: 360      agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19938874 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 19938933

                                                                            
Query: 420      aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 19938934 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 19938993

                                                                            
Query: 480      gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
                ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 19938994 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 19939053

                                                
Query: 540      naggcaaactctgaatactanatatgacccaa 571
                 ||||||||||||||||||| |||||||||||
Sbjct: 19939054 gaggcaaactctgaatactagatatgacccaa 19939085



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                            
Query: 360      agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10387741 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10387800

                                                                            
Query: 420      aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 10387801 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10387860

                                                                            
Query: 480      gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
                ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 10387861 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10387920

                                                
Query: 540      naggcaaactctgaatactanatatgacccaa 571
                 ||||||||||||||||||| |||||||||||
Sbjct: 10387921 gaggcaaactctgaatactagatatgacccaa 10387952



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                            
Query: 360      agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10276557 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10276498

                                                                            
Query: 420      aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 10276497 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10276438

                                                                            
Query: 480      gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
                ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 10276437 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10276378

                                                
Query: 540      naggcaaactctgaatactanatatgacccaa 571
                 ||||||||||||||||||| |||||||||||
Sbjct: 10276377 gaggcaaactctgaatactagatatgacccaa 10276346

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Plus

                                                                           
Query: 2       ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 9240392 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 9240451

                                                                           
Query: 62      tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240452 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 9240511

                                                                           
Query: 122     ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
               ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240512 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 9240571

                                                                           
Query: 182     acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240572 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 9240631

                                                                           
Query: 242     gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240632 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 9240691

                                                 
Query: 302     aaggggtagtacaggaatattgacctgttgtcca 335
               ||||||||||||||||||||||||||||||||||
Sbjct: 9240692 aaggggtagtacaggaatattgacctgttgtcca 9240725



 Score =  365 bits (184), Expect = 1e-97
 Identities = 203/212 (95%)
 Strand = Plus / Minus

                                                                           
Query: 360     agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
               ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9241392 agcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggttaggggtga 9241333

                                                                           
Query: 420     aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 9241332 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 9241273

                                                                           
Query: 480     gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
               ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 9241272 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 9241213

                                               
Query: 540     naggcaaactctgaatactanatatgacccaa 571
                ||||||||||||||||||| |||||||||||
Sbjct: 9241212 gaggcaaactctgaatactagatatgacccaa 9241181



 Score =  240 bits (121), Expect = 4e-60
 Identities = 218/249 (87%), Gaps = 6/249 (2%)
 Strand = Plus / Plus

                                                                           
Query: 4       acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 63
               ||||||||||||| ||||| |||||| |||| ||||||||||||||| || |||||||||
Sbjct: 3579634 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 3579693

                                                                           
Query: 64      ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 123
               |||  |||||||||| |     ||||||||||| | || ||  ||||| |||||||||||
Sbjct: 3579694 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 3579748

                                                                           
Query: 124     agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 183
                 ||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||
Sbjct: 3579749 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 3579808

                                                                           
Query: 184     ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 243
               || ||||  |||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 3579809 cttggcttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgt 3579867

                        
Query: 244     ccttaaacc 252
               |||||||||
Sbjct: 3579868 ccttaaacc 3579876



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                           
Query: 495     ggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctgaa 554
               |||||||||| ||||  | ||||| ||| ||||||| |||||| | || |||||||||||
Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490

                                
Query: 555     tactanatatgacccaa 571
               ||||| |||||||||||
Sbjct: 3580489 tactagatatgacccaa 3580473

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                            
Query: 2        ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 31600056 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 31599997

                                                                            
Query: 62       tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599996 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 31599937

                                                                            
Query: 122      ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599936 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 31599877

                                                                            
Query: 182      acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599876 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 31599817

                                                                            
Query: 242      gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599816 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 31599757

                                                  
Query: 302      aaggggtagtacaggaatattgacctgttgtcca 335
                ||||||||||||||||||||||||||||||||||
Sbjct: 31599756 aaggggtagtacaggaatattgacctgttgtcca 31599723



 Score =  622 bits (314), Expect = e-175
 Identities = 329/334 (98%)
 Strand = Plus / Plus

                                                                            
Query: 2        ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 27411333 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 27411392

                                                                            
Query: 62       tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27411393 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 27411452

                                                                            
Query: 122      ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
                ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 27411453 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagtgcttggtactcgg 27411512

                                                                            
Query: 182      acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
                |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 27411513 acctcggctcgaggcattttttctaccccttcttaccctgaaaaagcagggtcaccttgt 27411572

                                                                            
Query: 242      gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27411573 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 27411632

                                                  
Query: 302      aaggggtagtacaggaatattgacctgttgtcca 335
                ||||||||||||||||||||||||||||||||||
Sbjct: 27411633 aaggggtagtacaggaatattgacctgttgtcca 27411666



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                            
Query: 360      agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599056 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 31599115

                                                                            
Query: 420      aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 31599116 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 31599175

                                                                            
Query: 480      gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
                ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 31599176 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 31599235

                                                
Query: 540      naggcaaactctgaatactanatatgacccaa 571
                 ||||||||||||||||||| |||||||||||
Sbjct: 31599236 gaggcaaactctgaatactagatatgacccaa 31599267

---

>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
             sequence
          Length = 116932

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Plus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 46169 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 46228

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46229 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 46288

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46289 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 46348

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46349 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 46408

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46409 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 46468

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 46469 aaggggtagtacaggaatattgacctgttgtcca 46502



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47169 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 47110

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 47109 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 47050

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 47049 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 46990

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 46989 gaggcaaactctgaatactagatatgacccaa 46958

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Plus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 51605 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 51664

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51665 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 51724

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51725 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 51784

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51785 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 51844

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51845 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 51904

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 51905 aaggggtagtacaggaatattgacctgttgtcca 51938



 Score =  365 bits (184), Expect = 1e-97
 Identities = 203/212 (95%)
 Strand = Plus / Minus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52605 agcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggttaggggtga 52546

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 52545 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 52486

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 52485 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 52426

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 52425 gaggcaaactctgaatactagatatgacccaa 52394

---

>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full
           insert sequence
          Length = 1809

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                       
Query: 2   ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 395 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 336

                                                                       
Query: 62  tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 276

                                                                       
Query: 122 ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 216

                                                                       
Query: 182 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 156

                                                                       
Query: 242 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 96

                                             
Query: 302 aaggggtagtacaggaatattgacctgttgtcca 335
           ||||||||||||||||||||||||||||||||||
Sbjct: 95  aaggggtagtacaggaatattgacctgttgtcca 62

---

>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full
           insert sequence
          Length = 1345

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                       
Query: 2   ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 615 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 556

                                                                       
Query: 62  tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 496

                                                                       
Query: 122 ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 436

                                                                       
Query: 182 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 376

                                                                       
Query: 242 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 316

                                             
Query: 302 aaggggtagtacaggaatattgacctgttgtcca 335
           ||||||||||||||||||||||||||||||||||
Sbjct: 315 aaggggtagtacaggaatattgacctgttgtcca 282

---

>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full
           insert sequence
          Length = 2146

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                       
Query: 2   ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 811 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 752

                                                                       
Query: 62  tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 692

                                                                       
Query: 122 ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 632

                                                                       
Query: 182 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 572

                                                                       
Query: 242 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 512

                                             
Query: 302 aaggggtagtacaggaatattgacctgttgtcca 335
           ||||||||||||||||||||||||||||||||||
Sbjct: 511 aaggggtagtacaggaatattgacctgttgtcca 478

---

>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full
            insert sequence
          Length = 2390

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1536 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 1477

                                                                        
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1476 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 1417

                                                                        
Query: 122  ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1416 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 1357

                                                                        
Query: 182  acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1356 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 1297

                                                                        
Query: 242  gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1296 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 1237

                                              
Query: 302  aaggggtagtacaggaatattgacctgttgtcca 335
            ||||||||||||||||||||||||||||||||||
Sbjct: 1236 aaggggtagtacaggaatattgacctgttgtcca 1203



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 595

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 596 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 655

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 656 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 715

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 716 gaggcaaactctgaatactagatatgacccaa 747

---

>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full
            insert sequence
          Length = 2589

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1407 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 1348

                                                                        
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1347 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 1288

                                                                        
Query: 122  ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1287 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 1228

                                                                        
Query: 182  acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1227 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 1168

                                                                        
Query: 242  gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 1108

                                              
Query: 302  aaggggtagtacaggaatattgacctgttgtcca 335
            ||||||||||||||||||||||||||||||||||
Sbjct: 1107 aaggggtagtacaggaatattgacctgttgtcca 1074



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 466

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 467 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 526

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 527 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 586

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 587 gaggcaaactctgaatactagatatgacccaa 618

---

>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full
            insert sequence
          Length = 1896

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1536 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 1477

                                                                        
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1476 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 1417

                                                                        
Query: 122  ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1416 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 1357

                                                                        
Query: 182  acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1356 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 1297

                                                                        
Query: 242  gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1296 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 1237

                                              
Query: 302  aaggggtagtacaggaatattgacctgttgtcca 335
            ||||||||||||||||||||||||||||||||||
Sbjct: 1236 aaggggtagtacaggaatattgacctgttgtcca 1203



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 595

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 596 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 655

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 656 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 715

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 716 gaggcaaactctgaatactagatatgacccaa 747

---

>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full
            insert sequence
          Length = 1310

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1159 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 1100

                                                                        
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1099 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 1040

                                                                        
Query: 122  ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 980

                                                                        
Query: 182  acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979  acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 920

                                                                        
Query: 242  gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919  gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 860

                                              
Query: 302  aaggggtagtacaggaatattgacctgttgtcca 335
            ||||||||||||||||||||||||||||||||||
Sbjct: 859  aaggggtagtacaggaatattgacctgttgtcca 826



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 218

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 219 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 278

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 279 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 338

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 339 gaggcaaactctgaatactagatatgacccaa 370

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                            
Query: 2        ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 19951150 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 19951091

                                                                            
Query: 62       tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19951090 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 19951031

                                                                            
Query: 122      ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19951030 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 19950971

                                                                            
Query: 182      acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950970 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 19950911

                                                                            
Query: 242      gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950910 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 19950851

                                                  
Query: 302      aaggggtagtacaggaatattgacctgttgtcca 335
                ||||||||||||||||||||||||||||||||||
Sbjct: 19950850 aaggggtagtacaggaatattgacctgttgtcca 19950817



 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                            
Query: 2        ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10394780 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 10394721

                                                                            
Query: 62       tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394720 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 10394661

                                                                            
Query: 122      ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394660 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 10394601

                                                                            
Query: 182      acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394600 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 10394541

                                                                            
Query: 242      gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394540 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 10394481

                                                  
Query: 302      aaggggtagtacaggaatattgacctgttgtcca 335
                ||||||||||||||||||||||||||||||||||
Sbjct: 10394480 aaggggtagtacaggaatattgacctgttgtcca 10394447



 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Plus

                                                                            
Query: 2        ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10281596 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 10281655

                                                                            
Query: 62       tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10281656 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 10281715

                                                                            
Query: 122      ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
                ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10281716 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 10281775

                                                                            
Query: 182      acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10281776 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 10281835

                                                                            
Query: 242      gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10281836 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 10281895

                                                  
Query: 302      aaggggtagtacaggaatattgacctgttgtcca 335
                ||||||||||||||||||||||||||||||||||
Sbjct: 10281896 aaggggtagtacaggaatattgacctgttgtcca 10281929



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                            
Query: 360      agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950150 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 19950209

                                                                            
Query: 420      aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 19950210 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 19950269

                                                                            
Query: 480      gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
                ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 19950270 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 19950329

                                                
Query: 540      naggcaaactctgaatactanatatgacccaa 571
                 ||||||||||||||||||| |||||||||||
Sbjct: 19950330 gaggcaaactctgaatactagatatgacccaa 19950361



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                            
Query: 360      agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10393780 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10393839

                                                                            
Query: 420      aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 10393840 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10393899

                                                                            
Query: 480      gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
                ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 10393900 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10393959

                                                
Query: 540      naggcaaactctgaatactanatatgacccaa 571
                 ||||||||||||||||||| |||||||||||
Sbjct: 10393960 gaggcaaactctgaatactagatatgacccaa 10393991



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                            
Query: 360      agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10282596 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 10282537

                                                                            
Query: 420      aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 10282536 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 10282477

                                                                            
Query: 480      gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
                ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 10282476 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 10282417

                                                
Query: 540      naggcaaactctgaatactanatatgacccaa 571
                 ||||||||||||||||||| |||||||||||
Sbjct: 10282416 gaggcaaactctgaatactagatatgacccaa 10282385

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118137 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 118196

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118197 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 118256

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118257 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 118316

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118317 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 118376

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118377 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 118436

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 118437 aaggggtagtacaggaatattgacctgttgtcca 118470



 Score =  638 bits (322), Expect = e-180
 Identities = 331/334 (99%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96902 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 96843

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96842 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 96783

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96782 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 96723

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96722 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 96663

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96662 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 96603

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 96602 aaggggtagtacaggaatattgacctgttgtcca 96569



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119137 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119078

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 119077 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119018

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 119017 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 118958

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 118957 gaggcaaactctgaatactagatatgacccaa 118926



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95902 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 95961

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 95962 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96021

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 96022 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96081

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 96082 gaggcaaactctgaatactagatatgacccaa 96113

---

>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full
           insert sequence
          Length = 1383

 Score =  636 bits (321), Expect = e-179
 Identities = 330/333 (99%)
 Strand = Plus / Minus

                                                                       
Query: 2   ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 624 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 565

                                                                       
Query: 62  tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 505

                                                                       
Query: 122 ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 445

                                                                       
Query: 182 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 385

                                                                       
Query: 242 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 325

                                            
Query: 302 aaggggtagtacaggaatattgacctgttgtcc 334
           |||||||||||||||||||||||||||||||||
Sbjct: 324 aaggggtagtacaggaatattgacctgttgtcc 292

---

>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full
           insert sequence
          Length = 2509

 Score =  630 bits (318), Expect = e-177
 Identities = 330/334 (98%)
 Strand = Plus / Minus

                                                                       
Query: 2   ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 680 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 621

                                                                       
Query: 62  tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 561

                                                                       
Query: 122 ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 501

                                                                       
Query: 182 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 441

                                                                       
Query: 242 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 381

                                             
Query: 302 aaggggtagtacaggaatattgacctgttgtcca 335
           ||||||||||||||||||||||||| ||||||||
Sbjct: 380 aaggggtagtacaggaatattgacccgttgtcca 347

---

>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete
             sequence
          Length = 138345

 Score =  622 bits (314), Expect = e-175
 Identities = 329/334 (98%)
 Strand = Plus / Plus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 20217 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 20276

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20277 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 20336

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 20337 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagtgcttggtactcgg 20396

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 20397 acctcggctcgaggcattttttctaccccttcttaccctgaaaaagcagggtcaccttgt 20456

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20457 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 20516

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 20517 aaggggtagtacaggaatattgacctgttgtcca 20550

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  622 bits (314), Expect = e-175
 Identities = 330/334 (98%), Gaps = 1/334 (0%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 118164 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 118223

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 118224 tcctgggagtatggcatgggttacatacttca-cgccgtagcgcctggtatgagcctcgt 118282

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118283 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 118342

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118343 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 118402

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118403 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 118462

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 118463 aaggggtagtacaggaatattgacctgttgtcca 118496



 Score =  622 bits (314), Expect = e-175
 Identities = 330/334 (98%), Gaps = 1/334 (0%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 96954 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 96895

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 96894 tcctgggagtatggcatgggttacatacttca-cgccgtagcgcctggtatgagcctcgt 96836

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96835 ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 96776

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96775 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 96716

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96715 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 96656

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 96655 aaggggtagtacaggaatattgacctgttgtcca 96622



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119163 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 119104

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 119103 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 119044

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 119043 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 118984

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 118983 gaggcaaactctgaatactagatatgacccaa 118952



 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95955 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 96014

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 96015 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 96074

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 96075 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 96134

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 96135 gaggcaaactctgaatactagatatgacccaa 96166

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  615 bits (310), Expect = e-173
 Identities = 329/334 (98%), Gaps = 1/334 (0%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121936 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 121995

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 121996 tcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcctcgt 122054

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 122055 ggagaagcaatggctagtccacggggctcatactttcgcgctgcagcgcttggtactcgg 122114

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122115 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 122174

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122175 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 122234

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 122235 aaggggtagtacaggaatattgacctgttgtcca 122268



 Score =  615 bits (310), Expect = e-173
 Identities = 329/334 (98%), Gaps = 1/334 (0%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100801 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 100742

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 100741 tcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcctcgt 100683

                                                                          
Query: 122    ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 100682 ggagaagcaatggctagtccacggggctcatactttcgcgctgcagcgcttggtactcgg 100623

                                                                          
Query: 182    acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100622 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 100563

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100562 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 100503

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||||||||||
Sbjct: 100502 aaggggtagtacaggaatattgacctgttgtcca 100469



 Score =  357 bits (180), Expect = 3e-95
 Identities = 203/212 (95%), Gaps = 1/212 (0%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122933 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 122874

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 122873 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 122814

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | || |||||| ||||||| |||||| |
Sbjct: 122813 gactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatc 122755

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 122754 gaggcaaactctgaatactagatatgacccaa 122723



 Score =  357 bits (180), Expect = 3e-95
 Identities = 203/212 (95%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99804  agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 99863

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 99864  aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 99923

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | || |||||| ||||||| |||||| |
Sbjct: 99924  gactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatc 99982

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 99983  gaggcaaactctgaatactagatatgacccaa 100014

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  615 bits (310), Expect = e-173
 Identities = 328/334 (98%)
 Strand = Plus / Plus

                                                                           
Query: 2       ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 5634076 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 5634135

                                                                           
Query: 62      tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
               ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5634136 tcctgggagtatggcatgggttacatacttcagcaccgtagcgcctggtatgagcctcgt 5634195

                                                                           
Query: 122     ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
                |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634196 cgagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 5634255

                                                                           
Query: 182     acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 5634256 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgc 5634315

                                                                           
Query: 242     gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634316 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 5634375

                                                 
Query: 302     aaggggtagtacaggaatattgacctgttgtcca 335
               ||||||||||||||||||||||||||||||||||
Sbjct: 5634376 aaggggtagtacaggaatattgacctgttgtcca 5634409



 Score =  188 bits (95), Expect = 1e-44
 Identities = 101/103 (98%)
 Strand = Plus / Plus

                                                                            
Query: 142      acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 201
                |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 13417087 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13417146

                                                           
Query: 202      ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 244
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13417147 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 13417189



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                         
Query: 359      gagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 415
                |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11222336 gagcagagatccaaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 11222392

---

>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon
          Length = 8862

 Score =  615 bits (310), Expect = e-173
 Identities = 329/334 (98%), Gaps = 1/334 (0%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7154 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 7095

                                                                        
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
            ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7094 tcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcctcgt 7036

                                                                        
Query: 122  ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
            ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 7035 ggagaagcaatggctagtccacggggctcatactttcgcgctgcagcgcttggtactcgg 6976

                                                                        
Query: 182  acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6975 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 6916

                                                                        
Query: 242  gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6915 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 6856

                                              
Query: 302  aaggggtagtacaggaatattgacctgttgtcca 335
            ||||||||||||||||||||||||||||||||||
Sbjct: 6855 aaggggtagtacaggaatattgacctgttgtcca 6822



 Score =  357 bits (180), Expect = 3e-95
 Identities = 203/212 (95%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                        
Query: 360  agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6157 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 6216

                                                                        
Query: 420  aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6217 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 6276

                                                                        
Query: 480  gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
            ||||||||||||||||||||||||||||||| | || |||||| ||||||| |||||| |
Sbjct: 6277 gactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatc 6335

                                            
Query: 540  naggcaaactctgaatactanatatgacccaa 571
             ||||||||||||||||||| |||||||||||
Sbjct: 6336 gaggcaaactctgaatactagatatgacccaa 6367

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  615 bits (310), Expect = e-173
 Identities = 328/334 (98%)
 Strand = Plus / Plus

                                                                           
Query: 2       ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
               ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 5634065 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 5634124

                                                                           
Query: 62      tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
               ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5634125 tcctgggagtatggcatgggttacatacttcagcaccgtagcgcctggtatgagcctcgt 5634184

                                                                           
Query: 122     ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
                |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634185 cgagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 5634244

                                                                           
Query: 182     acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 5634245 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgc 5634304

                                                                           
Query: 242     gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634305 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 5634364

                                                 
Query: 302     aaggggtagtacaggaatattgacctgttgtcca 335
               ||||||||||||||||||||||||||||||||||
Sbjct: 5634365 aaggggtagtacaggaatattgacctgttgtcca 5634398



 Score =  188 bits (95), Expect = 1e-44
 Identities = 101/103 (98%)
 Strand = Plus / Plus

                                                                            
Query: 142      acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 201
                |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 13371361 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13371420

                                                           
Query: 202      ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 244
                |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13371421 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 13371463



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                         
Query: 359      gagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 415
                |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11222007 gagcagagatccaaaccgactgatgttgaagaatcagcggatgagttgtggttaggg 11222063

---

>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 139684

 Score =  615 bits (310), Expect = e-173
 Identities = 328/334 (98%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 18809 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 18750

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct: 18749 tcctgggagtatggcatgggttacatacttcagcaccgtagcgcctggtatgagcctcgt 18690

                                                                         
Query: 122   ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
              |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18689 cgagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 18630

                                                                         
Query: 182   acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 18629 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgc 18570

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18569 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 18510

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||||||||||
Sbjct: 18509 aaggggtagtacaggaatattgacctgttgtcca 18476

---

>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA
          Length = 3079

 Score =  615 bits (310), Expect = e-173
 Identities = 329/334 (98%), Gaps = 1/334 (0%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1742 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 1683

                                                                        
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
            ||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1682 tcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcctcgt 1624

                                                                        
Query: 122  ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
            ||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 1623 ggagaagcaatggctagtccacggggctcatactttcgcgctgcagcgcttggtactcgg 1564

                                                                        
Query: 182  acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1563 acctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgt 1504

                                                                        
Query: 242  gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1503 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 1444

                                              
Query: 302  aaggggtagtacaggaatattgacctgttgtcca 335
            ||||||||||||||||||||||||||||||||||
Sbjct: 1443 aaggggtagtacaggaatattgacctgttgtcca 1410



 Score =  357 bits (180), Expect = 3e-95
 Identities = 203/212 (95%), Gaps = 1/212 (0%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 804

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 805 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 864

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | || |||||| ||||||| |||||| |
Sbjct: 865 gactggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatc 923

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 924 gaggcaaactctgaatactagatatgacccaa 955

---

>ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0075K12.8), mRNA
          Length = 858

 Score =  430 bits (217), Expect = e-117
 Identities = 226/229 (98%)
 Strand = Plus / Plus

                                                                       
Query: 29  aggtacccttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacata 88
           |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 630 aggtacccctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacata 689

                                                                       
Query: 89  cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggc 148
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 690 cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggc 749

                                                                       
Query: 149 tcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 809

                                                            
Query: 209 ccttcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataa 257
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 ccttcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataa 858

---

>dbj|AK058625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C02, full
           insert sequence
          Length = 425

 Score =  375 bits (189), Expect = e-100
 Identities = 198/201 (98%)
 Strand = Plus / Minus

                                                                       
Query: 2   ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 142

                                                                       
Query: 62  tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcctcgt 82

                                                                       
Query: 122 ggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 181
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81  ggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtactcgg 22

                                
Query: 182 acctcggctcgaggcattttc 202
           |||||||||||||||||||||
Sbjct: 21  acctcggctcgaggcattttc 1

---

>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence;
           chloroplast
          Length = 982

 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 181

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 180 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 121

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 120 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 61

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 60  gaggcaaactctgaatactagatatgacccaa 29

---

>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence;
           tRNA-Ala (trnA) gene, complete sequence; hypothetical
           protein gene, complete cds; ACR pseudogene, complete
           sequence; tRNA-Ile (trnI) gene, partial sequence; and
           ORF72 pseudogene, partial sequence; chloroplast genes
           for chloroplast products
          Length = 3026

 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Minus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 724

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 723 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 664

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 663 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 604

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 603 gaggcaaactctgaatactagatatgacccaa 572



 Score =  230 bits (116), Expect = 4e-57
 Identities = 116/116 (100%)
 Strand = Plus / Plus

                                                                       
Query: 220 tgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcc 279
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcc 60

                                                                   
Query: 280 tcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 335
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 116

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                            
Query: 360      agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33526372 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 33526431

                                                                            
Query: 420      aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 33526432 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 33526491

                                                                            
Query: 480      gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
                ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 33526492 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 33526551

                                                
Query: 540      naggcaaactctgaatactanatatgacccaa 571
                 ||||||||||||||||||| |||||||||||
Sbjct: 33526552 gaggcaaactctgaatactagatatgacccaa 33526583

---

>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71569 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 71628

                                                                         
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 71629 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 71688

                                                                         
Query: 480   gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
             ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 71689 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 71748

                                             
Query: 540   naggcaaactctgaatactanatatgacccaa 571
              ||||||||||||||||||| |||||||||||
Sbjct: 71749 gaggcaaactctgaatactagatatgacccaa 71780

---

>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full
           insert sequence
          Length = 1517

 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 592

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 593 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 652

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 653 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 712

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 713 gaggcaaactctgaatactagatatgacccaa 744

---

>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full
           insert sequence
          Length = 1935

 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 400

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 401 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 460

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 461 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 520

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 521 gaggcaaactctgaatactagatatgacccaa 552



 Score =  321 bits (162), Expect = 1e-84
 Identities = 165/166 (99%)
 Strand = Plus / Minus

                                                                        
Query: 170  cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 229
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 cttgttactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 1114

                                                                        
Query: 230  gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 1054

                                                          
Query: 290  ctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 335
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1053 ctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 1008

---

>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full
           insert sequence
          Length = 1684

 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 800

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 801 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 860

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 861 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 920

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 921 gaggcaaactctgaatactagatatgacccaa 952

---

>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full
           insert sequence
          Length = 1223

 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 707

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 708 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 767

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 768 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 827

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 828 gaggcaaactctgaatactagatatgacccaa 859

---

>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full
           insert sequence
          Length = 1463

 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 594

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 595 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 654

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 655 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 714

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 715 gaggcaaactctgaatactagatatgacccaa 746

---

>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full
           insert sequence
          Length = 1109

 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 597

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 598 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 657

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 658 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 717

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 718 gaggcaaactctgaatactagatatgacccaa 749

---

>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full
           insert sequence
          Length = 819

 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 216

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 217 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 276

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 277 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 336

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 337 gaggcaaactctgaatactagatatgacccaa 368

---

>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full
           insert sequence
          Length = 1634

 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 416

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 417 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 476

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 477 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 536

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 537 gaggcaaactctgaatactagatatgacccaa 568

---

>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full
           insert sequence
          Length = 1462

 Score =  373 bits (188), Expect = e-100
 Identities = 204/212 (96%)
 Strand = Plus / Plus

                                                                       
Query: 360 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 597

                                                                       
Query: 420 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 598 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 657

                                                                       
Query: 480 gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
           ||||||||||||||||||||||||||||||| | ||||||||| ||||||| |||||| |
Sbjct: 658 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 717

                                           
Query: 540 naggcaaactctgaatactanatatgacccaa 571
            ||||||||||||||||||| |||||||||||
Sbjct: 718 gaggcaaactctgaatactagatatgacccaa 749

---

>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0034M22, complete sequence
          Length = 149435

 Score =  357 bits (180), Expect = 3e-95
 Identities = 202/212 (95%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122473 agcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 122414

                                                                          
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 122413 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 122354

                                                                          
Query: 480    gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
              ||||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||  
Sbjct: 122353 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatt 122294

                                              
Query: 540    naggcaaactctgaatactanatatgacccaa 571
               ||||||||||||||||||| |||||||||||
Sbjct: 122293 gaggcaaactctgaatactagatatgacccaa 122262

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  357 bits (180), Expect = 3e-95
 Identities = 202/212 (95%)
 Strand = Plus / Minus

                                                                            
Query: 360      agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
                ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12825014 agcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 12824955

                                                                            
Query: 420      aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt 479
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 12824954 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 12824895

                                                                            
Query: 480      gactggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaanc 539
                ||||||||||||||||||||||||||||||| | ||||||||| ||||||| ||||||  
Sbjct: 12824894 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatt 12824835

                                                
Query: 540      naggcaaactctgaatactanatatgacccaa 571
                 ||||||||||||||||||| |||||||||||
Sbjct: 12824834 gaggcaaactctgaatactagatatgacccaa 12824803

---

>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial
           sequence; chloroplast
          Length = 654

 Score =  345 bits (174), Expect = 1e-91
 Identities = 174/174 (100%)
 Strand = Plus / Plus

                                                                       
Query: 162 ctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctg 221
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctg 60

                                                                       
Query: 222 aaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctc 281
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  aaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctc 120

                                                                 
Query: 282 ctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 335
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 174

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  345 bits (174), Expect = 1e-91
 Identities = 196/206 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138848 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 138789

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 138788 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 138729

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 138728 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 138669

                                        
Query: 544    caaactctgaatactanatatgaccc 569
              |||||||||||||||| |||||||||
Sbjct: 138668 caaactctgaatactagatatgaccc 138643



 Score =  345 bits (174), Expect = 1e-91
 Identities = 196/206 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111097 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 111156

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 111157 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 111216

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 111217 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 111276

                                        
Query: 544    caaactctgaatactanatatgaccc 569
              |||||||||||||||| |||||||||
Sbjct: 111277 caaactctgaatactagatatgaccc 111302



 Score =  248 bits (125), Expect = 2e-62
 Identities = 171/185 (92%), Gaps = 1/185 (0%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 137996 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 138055

                                                                          
Query: 212    tcttaccctgaaaaa-gcagggtcaccttgtgtccttaaacctataaccatctttcggct 270
              ||||||||||||||| ||| |||||||||| |||||| |||| |||||||||||||||||
Sbjct: 138056 tcttaccctgaaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggct 138115

                                                                          
Query: 271    aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 330
              |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 138116 aacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgtt 138175

                   
Query: 331    gtcca 335
              |||||
Sbjct: 138176 gtcca 138180



 Score =  248 bits (125), Expect = 2e-62
 Identities = 171/185 (92%), Gaps = 1/185 (0%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 111949 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 111890

                                                                          
Query: 212    tcttaccctgaaaaa-gcagggtcaccttgtgtccttaaacctataaccatctttcggct 270
              ||||||||||||||| ||| |||||||||| |||||| |||| |||||||||||||||||
Sbjct: 111889 tcttaccctgaaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggct 111830

                                                                          
Query: 271    aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 330
              |||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||
Sbjct: 111829 aacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgtt 111770

                   
Query: 331    gtcca 335
              |||||
Sbjct: 111769 gtcca 111765



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137915 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 137974

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 137975 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 138020



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112030 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 111971

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 111970 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 111925

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  345 bits (174), Expect = 1e-91
 Identities = 196/206 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141370 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 141311

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 141310 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 141251

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 141250 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 141191

                                        
Query: 544    caaactctgaatactanatatgaccc 569
              |||||||||||||||| |||||||||
Sbjct: 141190 caaactctgaatactagatatgaccc 141165



 Score =  345 bits (174), Expect = 1e-91
 Identities = 196/206 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112287 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 112346

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 112347 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 112406

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 112407 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 112466

                                        
Query: 544    caaactctgaatactanatatgaccc 569
              |||||||||||||||| |||||||||
Sbjct: 112467 caaactctgaatactagatatgaccc 112492



 Score =  214 bits (108), Expect = 2e-52
 Identities = 170/189 (89%), Gaps = 5/189 (2%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 140519 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 140578

                                                                          
Query: 212    tcttaccctgaaaaa----gcagggtcaccttgtgtccttaaacctataa-ccatctttc 266
              |||||||||||||||    ||| |||||||||| |||||| |||| |||| ||| |||||
Sbjct: 140579 tcttaccctgaaaaaaaaagcaaggtcaccttgcgtccttgaaccgataaaccacctttc 140638

                                                                          
Query: 267    ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 326
              |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||
Sbjct: 140639 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 140698

                       
Query: 327    tgttgtcca 335
              |||||||||
Sbjct: 140699 tgttgtcca 140707



 Score =  214 bits (108), Expect = 2e-52
 Identities = 170/189 (89%), Gaps = 5/189 (2%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 113138 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 113079

                                                                          
Query: 212    tcttaccctgaaaaa----gcagggtcaccttgtgtccttaaacctataa-ccatctttc 266
              |||||||||||||||    ||| |||||||||| |||||| |||| |||| ||| |||||
Sbjct: 113078 tcttaccctgaaaaaaaaagcaaggtcaccttgcgtccttgaaccgataaaccacctttc 113019

                                                                          
Query: 267    ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 326
              |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||
Sbjct: 113018 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 112959

                       
Query: 327    tgttgtcca 335
              |||||||||
Sbjct: 112958 tgttgtcca 112950



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140438 ctacccacctgtgttggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 140497

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 140498 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 140543



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113219 ctacccacctgtgttggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 113160

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 113159 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 113114

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  345 bits (174), Expect = 1e-91
 Identities = 196/206 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127126 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 127067

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 127066 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 127007

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 127006 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 126947

                                        
Query: 544    caaactctgaatactanatatgaccc 569
              |||||||||||||||| |||||||||
Sbjct: 126946 caaactctgaatactagatatgaccc 126921



 Score =  345 bits (174), Expect = 1e-91
 Identities = 196/206 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107796 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 107855

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 107856 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 107915

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 107916 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 107975

                                        
Query: 544    caaactctgaatactanatatgaccc 569
              |||||||||||||||| |||||||||
Sbjct: 107976 caaactctgaatactagatatgaccc 108001



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 126284 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 126343

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              |||||||||||||||||| |||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 126344 tcttaccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggcta 126403

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 126404 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 126463

                  
Query: 332    tcca 335
              ||||
Sbjct: 126464 tcca 126467



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 108638 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 108579

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              |||||||||||||||||| |||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 108578 tcttaccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggcta 108519

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 108518 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 108459

                  
Query: 332    tcca 335
              ||||
Sbjct: 108458 tcca 108455



 Score =  153 bits (77), Expect = 7e-34
 Identities = 102/110 (92%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 126203 ctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggtcgttcgagcttt 126262

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||| ||||||| ||| |||    |||||||||||||||||||||||||
Sbjct: 126263 tcctgagagtatgacatgggt----tacttcagcgccgtagcgcctggta 126308



 Score =  153 bits (77), Expect = 7e-34
 Identities = 102/110 (92%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 108719 ctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggtcgttcgagcttt 108660

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||| ||||||| ||| |||    |||||||||||||||||||||||||
Sbjct: 108659 tcctgagagtatgacatgggt----tacttcagcgccgtagcgcctggta 108614

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138767 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 138708

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 138707 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 138648

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 138647 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 138588

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 138587 caaactctgaatactagatatgacc 138563



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110330 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 110389

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 110390 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 110449

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 110450 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 110509

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 110510 caaactctgaatactagatatgacc 110534



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 137921 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 137980

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 137981 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 138040

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 138041 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138100

                  
Query: 332    tcca 335
              ||||
Sbjct: 138101 tcca 138104



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 111176 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 111117

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 111116 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 111057

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 111056 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 110997

                  
Query: 332    tcca 335
              ||||
Sbjct: 110996 tcca 110993



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137840 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 137899

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||| |||| |||    |||||||||||||||||||||||||
Sbjct: 137900 tcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 137945



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111257 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 111198

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||| |||| |||    |||||||||||||||||||||||||
Sbjct: 111197 tcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 111152

---

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132038 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 131979

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 131978 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 131919

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 131918 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 131859

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 131858 caaactctgaatactagatatgacc 131834



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104840 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104899

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 104900 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 104959

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 104960 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 105019

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 105020 caaactctgaatactagatatgacc 105044



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 131192 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 131251

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 131252 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 131311

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 131312 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131371

                  
Query: 332    tcca 335
              ||||
Sbjct: 131372 tcca 131375



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 105686 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 105627

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 105626 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105567

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 105566 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105507

                  
Query: 332    tcca 335
              ||||
Sbjct: 105506 tcca 105503



 Score =  184 bits (93), Expect = 2e-43
 Identities = 106/110 (96%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131111 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 131170

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||||||||||||    |||||||||||||||||||||||||
Sbjct: 131171 tcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggta 131216



 Score =  184 bits (93), Expect = 2e-43
 Identities = 106/110 (96%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105767 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 105708

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||||||||||||    |||||||||||||||||||||||||
Sbjct: 105707 tcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggta 105662

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135563 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 135504

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 135503 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 135444

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 135443 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 135384

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 135383 caaactctgaatactagatatgacc 135359



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107067 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 107126

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 107127 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 107186

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 107187 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 107246

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 107247 caaactctgaatactagatatgacc 107271



 Score =  222 bits (112), Expect = 1e-54
 Identities = 166/184 (90%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 134717 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134776

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||| ||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134777 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134836

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 134837 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134896

                  
Query: 332    tcca 335
              ||||
Sbjct: 134897 tcca 134900



 Score =  222 bits (112), Expect = 1e-54
 Identities = 166/184 (90%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107913 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107854

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||| ||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107853 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107794

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 107793 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107734

                  
Query: 332    tcca 335
              ||||
Sbjct: 107733 tcca 107730



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 134636 ctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttt 134695

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 134696 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134742



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 107994 ctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttt 107935

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 107934 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107888

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130930 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 130871

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 130870 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 130811

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 130810 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 130751

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 130750 caaactctgaatactagatatgacc 130726



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103705 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 103764

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 103765 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 103824

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 103825 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 103884

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 103885 caaactctgaatactagatatgacc 103909



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 130084 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 130143

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 130144 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 130203

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 130204 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 130263

                  
Query: 332    tcca 335
              ||||
Sbjct: 130264 tcca 130267



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 104551 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 104492

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 104491 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 104432

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 104431 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 104372

                  
Query: 332    tcca 335
              ||||
Sbjct: 104371 tcca 104368



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 130003 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggccgttcgagcttt 130062

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 130063 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 130108



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 104632 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggccgttcgagcttt 104573

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 104572 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 104527

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131054 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 130995

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 130994 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 130935

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 130934 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 130875

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 130874 caaactctgaatactagatatgacc 130850



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102391 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 102450

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 102451 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 102510

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 102511 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 102570

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 102571 caaactctgaatactagatatgacc 102595



 Score =  254 bits (128), Expect = 3e-64
 Identities = 171/184 (92%), Gaps = 1/184 (0%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 130209 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 130268

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 130269 tcttaccctgaaaaa-cagggtcaccttgcgtccttgaaccgataaccatctttcggcta 130327

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 130328 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 130387

                  
Query: 332    tcca 335
              ||||
Sbjct: 130388 tcca 130391



 Score =  254 bits (128), Expect = 3e-64
 Identities = 171/184 (92%), Gaps = 1/184 (0%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 103236 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 103177

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||| ||||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 103176 tcttaccctgaaaaa-cagggtcaccttgcgtccttgaaccgataaccatctttcggcta 103118

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 103117 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 103058

                  
Query: 332    tcca 335
              ||||
Sbjct: 103057 tcca 103054



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130128 ctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 130187

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||||||||||||    |||||||||||||||||||||||||
Sbjct: 130188 tcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggta 130233



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103317 ctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 103258

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||||||||||||    |||||||||||||||||||||||||
Sbjct: 103257 tcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggta 103212

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136201 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 136142

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 136141 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 136082

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 136081 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 136022

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 136021 caaactctgaatactagatatgacc 135997



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107356 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 107415

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 107416 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 107475

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 107476 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 107535

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 107536 caaactctgaatactagatatgacc 107560



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 135355 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 135414

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 135415 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 135474

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 135475 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 135534

                  
Query: 332    tcca 335
              ||||
Sbjct: 135535 tcca 135538



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 108202 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 108143

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 108142 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 108083

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 108082 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 108023

                  
Query: 332    tcca 335
              ||||
Sbjct: 108022 tcca 108019



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 135274 ctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttt 135333

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 135334 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 135380



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 108283 ctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttt 108224

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 108223 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 108177

---

>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA
            intergenic spacer region and 23S ribosomal RNA gene,
            partial sequences
          Length = 3735

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2261 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 2320

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2321 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 2380

                                                                        
Query: 484  ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 2381 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 2440

                                     
Query: 544  caaactctgaatactanatatgacc 568
            |||||||||||||||| ||||||||
Sbjct: 2441 caaactctgaatactagatatgacc 2465



 Score =  222 bits (112), Expect = 1e-54
 Identities = 166/184 (90%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 3107 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 3048

                                                                        
Query: 212  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
            ||||||||||| ||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 3047 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 2988

                                                                        
Query: 272  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
            ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 2987 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 2928

                
Query: 332  tcca 335
            ||||
Sbjct: 2927 tcca 2924



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 3188 ctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttt 3129

                                                               
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
            ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 3128 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 3082

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134809 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 134750

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 134749 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 134690

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 134689 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 134630

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 134629 caaactctgaatactagatatgacc 134605



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106227 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 106286

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 106287 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 106346

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 106347 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 106406

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 106407 caaactctgaatactagatatgacc 106431



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 133963 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134022

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134023 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134082

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 134083 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134142

                  
Query: 332    tcca 335
              ||||
Sbjct: 134143 tcca 134146



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107073 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107014

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107013 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 106954

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 106953 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106894

                  
Query: 332    tcca 335
              ||||
Sbjct: 106893 tcca 106890



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 133882 ctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttt 133941

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 133942 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 133988



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 107154 ctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttt 107095

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 107094 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107048

---

>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7
             gene region
          Length = 47249

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46994 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 47053

                                                                         
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 47054 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 47113

                                                                         
Query: 484   ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
             ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 47114 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 47173

                                      
Query: 544   caaactctgaatactanatatgacc 568
             |||||||||||||||| ||||||||
Sbjct: 47174 caaactctgaatactagatatgacc 47198

---

>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2867

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 793

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 794 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 853

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 854 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 913

                                    
Query: 544 caaactctgaatactanatatgacc 568
           |||||||||||||||| ||||||||
Sbjct: 914 caaactctgaatactagatatgacc 938



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1682 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 1623

                                                              
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
            ||||||||||||||||| |||    ||||||||||||||| |||||||||
Sbjct: 1622 tcctgggagtatggcatgggt----tacttcagcgccgtatcgcctggta 1577



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | | ||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 1601 tacttcagcgccgtatcgcctggtactcgaacattggctcgaggcattttctctacccct 1542

                                 
Query: 212  tcttaccctgaaaaagcaggg 232
            ||||||||||||||| |||||
Sbjct: 1541 tcttaccctgaaaaaccaggg 1521

---

>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 2899

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 802

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 803 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 862

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 863 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 922

                                    
Query: 544 caaactctgaatactanatatgacc 568
           |||||||||||||||| ||||||||
Sbjct: 923 caaactctgaatactagatatgacc 947

---

>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2927

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 778 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 837

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 838 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 897

                                    
Query: 544 caaactctgaatactanatatgacc 568
           |||||||||||||||| ||||||||
Sbjct: 898 caaactctgaatactagatatgacc 922

---

>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2913

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 816

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 817 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 876

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 877 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 936

                                    
Query: 544 caaactctgaatactanatatgacc 568
           |||||||||||||||| ||||||||
Sbjct: 937 caaactctgaatactagatatgacc 961



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 2    ctacccacctgtgtcggtttcgggtacaggtaccctttt 40
            ||||||||||||||||||||| |||| | ||||||||||
Sbjct: 1728 ctacccacctgtgtcggtttctggtaaaagtaccctttt 1690

---

>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2873

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 804

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 805 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 864

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 865 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 924

                                    
Query: 544 caaactctgaatactanatatgacc 568
           |||||||||||||||| ||||||||
Sbjct: 925 caaactctgaatactagatatgacc 949



 Score =  145 bits (73), Expect = 2e-31
 Identities = 83/85 (97%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtaccctttt-gttgaaggtcgttcgagctt 60
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1685 ctacccacctgtgtcggtttcgggtacaggtaccctttttgttgaaggtcgttcgagctt 1626

                                     
Query: 61   ttcctgggagtatggcatcggttac 85
            |||||||||||||||||| ||||||
Sbjct: 1625 ttcctgggagtatggcattggttac 1601

---

>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2894

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 815

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 816 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 875

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 876 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 935

                                    
Query: 544 caaactctgaatactanatatgacc 568
           |||||||||||||||| ||||||||
Sbjct: 936 caaactctgaatactagatatgacc 960



 Score =  139 bits (70), Expect = 1e-29
 Identities = 77/78 (98%), Gaps = 1/78 (1%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcg-agctt 60
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1702 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgaagctt 1643

                              
Query: 61   ttcctgggagtatggcat 78
            ||||||||||||||||||
Sbjct: 1642 ttcctgggagtatggcat 1625

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135855 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 135796

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 135795 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 135736

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 135735 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 135676

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 135675 caaactctgaatactagatatgacc 135651



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106570 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 106629

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 106630 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 106689

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 106690 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 106749

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 106750 caaactctgaatactagatatgacc 106774



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 135009 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 135068

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 135069 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 135128

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 135129 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 135188

                  
Query: 332    tcca 335
              ||||
Sbjct: 135189 tcca 135192



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 107416 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 107357

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 107356 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 107297

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 107296 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107237

                  
Query: 332    tcca 335
              ||||
Sbjct: 107236 tcca 107233



 Score =  161 bits (81), Expect = 3e-36
 Identities = 103/110 (93%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134928 ctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 134987

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||| | |||    |||||||||||||||||||||||||
Sbjct: 134988 tcctgggagtatggcgtgggt----tacttcagcgccgtagcgcctggta 135033



 Score =  161 bits (81), Expect = 3e-36
 Identities = 103/110 (93%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107497 ctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 107438

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||| | |||    |||||||||||||||||||||||||
Sbjct: 107437 tcctgggagtatggcgtgggt----tacttcagcgccgtagcgcctggta 107392

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134944 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 134885

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 134884 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 134825

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 134824 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 134765

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 134764 caaactctgaatactagatatgacc 134740



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106399 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 106458

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 106459 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 106518

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 106519 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 106578

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 106579 caaactctgaatactagatatgacc 106603



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 134098 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134157

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134158 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134217

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 134218 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134277

                  
Query: 332    tcca 335
              ||||
Sbjct: 134278 tcca 134281



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107245 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107186

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107185 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107126

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 107125 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 107066

                  
Query: 332    tcca 335
              ||||
Sbjct: 107065 tcca 107062



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 134017 ctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttt 134076

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 134077 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134123



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 107326 ctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttt 107267

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 107266 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107220

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134942 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 134883

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 134882 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 134823

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 134822 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 134763

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 134762 caaactctgaatactagatatgacc 134738



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106396 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 106455

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 106456 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 106515

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 106516 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 106575

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 106576 caaactctgaatactagatatgacc 106600



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 134096 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134155

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134156 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134215

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 134216 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134275

                  
Query: 332    tcca 335
              ||||
Sbjct: 134276 tcca 134279



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107242 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107183

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107182 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107123

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 107122 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 107063

                  
Query: 332    tcca 335
              ||||
Sbjct: 107062 tcca 107059



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 134015 ctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttt 134074

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 134075 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134121



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 107323 ctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttt 107264

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 107263 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107217

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134854 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 134795

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 134794 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 134735

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 134734 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 134675

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 134674 caaactctgaatactagatatgacc 134650



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106274 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 106333

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 106334 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 106393

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 106394 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 106453

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 106454 caaactctgaatactagatatgacc 106478



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 134008 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134067

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134068 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134127

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 134128 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134187

                  
Query: 332    tcca 335
              ||||
Sbjct: 134188 tcca 134191



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107120 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107061

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107060 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107001

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 107000 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106941

                  
Query: 332    tcca 335
              ||||
Sbjct: 106940 tcca 106937



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 133927 ctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttt 133986

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 133987 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134033



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 107201 ctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttt 107142

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 107141 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107095

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135561 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 135502

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 135501 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 135442

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 135441 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 135382

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 135381 caaactctgaatactagatatgacc 135357



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107065 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 107124

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 107125 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 107184

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 107185 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 107244

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 107245 caaactctgaatactagatatgacc 107269



 Score =  222 bits (112), Expect = 1e-54
 Identities = 166/184 (90%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 134715 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134774

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||| ||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134775 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134834

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 134835 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134894

                  
Query: 332    tcca 335
              ||||
Sbjct: 134895 tcca 134898



 Score =  222 bits (112), Expect = 1e-54
 Identities = 166/184 (90%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107911 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107852

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||| ||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107851 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107792

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 107791 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107732

                  
Query: 332    tcca 335
              ||||
Sbjct: 107731 tcca 107728



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 134634 ctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttt 134693

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 134694 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134740



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 107992 ctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttt 107933

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 107932 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107886

---

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132031 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 131972

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 131971 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 131912

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 131911 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 131852

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 131851 caaactctgaatactagatatgacc 131827



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104838 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104897

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 104898 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 104957

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 104958 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 105017

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 105018 caaactctgaatactagatatgacc 105042



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 131185 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 131244

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 131245 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 131304

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 131305 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131364

                  
Query: 332    tcca 335
              ||||
Sbjct: 131365 tcca 131368



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 105684 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 105625

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 105624 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105565

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 105564 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105505

                  
Query: 332    tcca 335
              ||||
Sbjct: 105504 tcca 105501



 Score =  184 bits (93), Expect = 2e-43
 Identities = 106/110 (96%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131104 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 131163

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||||||||||||    |||||||||||||||||||||||||
Sbjct: 131164 tcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggta 131209



 Score =  184 bits (93), Expect = 2e-43
 Identities = 106/110 (96%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105765 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 105706

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||||||||||||    |||||||||||||||||||||||||
Sbjct: 105705 tcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggta 105660

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135292 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 135233

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 135232 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 135173

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 135172 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 135113

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 135112 caaactctgaatactagatatgacc 135088



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106846 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 106905

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 106906 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 106965

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 106966 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 107025

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 107026 caaactctgaatactagatatgacc 107050



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 134446 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134505

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134506 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134565

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 134566 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134625

                  
Query: 332    tcca 335
              ||||
Sbjct: 134626 tcca 134629



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107692 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107633

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107632 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107573

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 107572 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107513

                  
Query: 332    tcca 335
              ||||
Sbjct: 107512 tcca 107509



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 134365 ctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttt 134424

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 134425 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134471



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 107773 ctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttt 107714

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 107713 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107667

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138972 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 138913

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 138912 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 138853

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 138852 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 138793

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 138792 caaactctgaatactagatatgacc 138768



 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110327 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 110386

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 110387 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 110446

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 110447 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 110506

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 110507 caaactctgaatactagatatgacc 110531



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 138126 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 138185

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 138186 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 138245

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 138246 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138305

                  
Query: 332    tcca 335
              ||||
Sbjct: 138306 tcca 138309



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 111173 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 111114

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 111113 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 111054

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 111053 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 110994

                  
Query: 332    tcca 335
              ||||
Sbjct: 110993 tcca 110990



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138045 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 138104

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 138105 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 138150



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111254 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 111195

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 111194 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 111149

---

>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes
          Length = 3166

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 893

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 894  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 953

                                                                        
Query: 484  ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 954  ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 1013

                                     
Query: 544  caaactctgaatactanatatgacc 568
            |||||||||||||||| ||||||||
Sbjct: 1014 caaactctgaatactagatatgacc 1038



 Score =  210 bits (106), Expect = 4e-51
 Identities = 154/170 (90%)
 Strand = Plus / Minus

                                                                        
Query: 166  agcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaa 225
            ||||| ||||| ||| || | |||||||||||||||||||||||||||||||||||| ||
Sbjct: 1665 agcgcctggtattcgaacattggctcgaggcattttctctaccccttcttaccctgacaa 1606

                                                                        
Query: 226  agcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctcc 285
            ||||||| ||||||  || ||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 1605 agcagggacaccttacgttcttgaaccgataaccatctttcggctaacctagcctcctcc 1546

                                                              
Query: 286  gtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 335
            ||||||| | |||||||||||| |||||||||||||| ||||||||||||
Sbjct: 1545 gtccctcgggaccaacaaggggcagtacaggaatattcacctgttgtcca 1496



 Score =  127 bits (64), Expect = 4e-26
 Identities = 79/84 (94%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 1759 ctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttt 1700

                                    
Query: 62   tcctgggagtatggcatcggttac 85
            ||||||||||||||||| ||||||
Sbjct: 1699 tcctgggagtatggcatgggttac 1676

---

>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene
          Length = 2811

 Score =  343 bits (173), Expect = 4e-91
 Identities = 195/205 (95%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 797

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 798 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 857

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 858 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 917

                                    
Query: 544 caaactctgaatactanatatgacc 568
           |||||||||||||||| ||||||||
Sbjct: 918 caaactctgaatactagatatgacc 942



 Score =  246 bits (124), Expect = 7e-62
 Identities = 169/184 (91%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||||||
Sbjct: 1584 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacccct 1525

                                                                        
Query: 212  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
            ||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 1524 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1465

                                                                        
Query: 272  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
            ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 1464 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 1405

                
Query: 332  tcca 335
            ||||
Sbjct: 1404 tcca 1401



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1665 ctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 1606

                                                              
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
            ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 1605 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 1560

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  341 bits (172), Expect = 2e-90
 Identities = 197/208 (94%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133485 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 133426

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 133425 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 133366

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
               |||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 133365 agacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 133306

                                          
Query: 544    caaactctgaatactanatatgacccaa 571
              |||||||||||||||| |||||||||||
Sbjct: 133305 caaactctgaatactagatatgacccaa 133278



 Score =  341 bits (172), Expect = 2e-90
 Identities = 197/208 (94%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104486 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104545

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 104546 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 104605

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
               |||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 104606 agacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 104665

                                          
Query: 544    caaactctgaatactanatatgacccaa 571
              |||||||||||||||| |||||||||||
Sbjct: 104666 caaactctgaatactagatatgacccaa 104693



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 132640 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 132699

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 132700 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 132759

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 132760 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 132819

                  
Query: 332    tcca 335
              ||||
Sbjct: 132820 tcca 132823



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| |||||||||||| | |||||||||||||| ||||||||||
Sbjct: 105331 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 105272

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 105271 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105212

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 105211 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105152

                  
Query: 332    tcca 335
              ||||
Sbjct: 105151 tcca 105148



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 132559 ctacccacctgtgtcggtttcgggtacaggtacccttttgttaaaggtcgttcgagcttt 132618

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 132619 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 132664



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 105412 ctacccacctgtgtcggtttcgggtacaggtacccttttgttaaaggtcgttcgagcttt 105353

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 105352 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 105307

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  339 bits (171), Expect = 6e-90
 Identities = 193/203 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135164 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 135105

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 135104 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 135045

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 135044 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 134985

                                     
Query: 544    caaactctgaatactanatatga 566
              |||||||||||||||| ||||||
Sbjct: 134984 caaactctgaatactagatatga 134962



 Score =  339 bits (171), Expect = 6e-90
 Identities = 193/203 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106742 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 106801

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 106802 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 106861

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 106862 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 106921

                                     
Query: 544    caaactctgaatactanatatga 566
              |||||||||||||||| ||||||
Sbjct: 106922 caaactctgaatactagatatga 106944



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| ||
Sbjct: 134318 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 134377

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||| ||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 134378 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 134437

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 134438 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 134497

                  
Query: 332    tcca 335
              ||||
Sbjct: 134498 tcca 134501



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| ||
Sbjct: 107588 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 107529

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||| ||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 107528 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 107469

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 107468 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107409

                  
Query: 332    tcca 335
              ||||
Sbjct: 107408 tcca 107405



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134237 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 134296

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 134297 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 134342



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107669 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 107610

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 107609 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 107564

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  339 bits (171), Expect = 6e-90
 Identities = 193/203 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134247 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 134188

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 134187 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 134128

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 134127 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 134068

                                     
Query: 544    caaactctgaatactanatatga 566
              |||||||||||||||| ||||||
Sbjct: 134067 caaactctgaatactagatatga 134045



 Score =  339 bits (171), Expect = 6e-90
 Identities = 193/203 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106035 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 106094

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 106095 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 106154

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 106155 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 106214

                                     
Query: 544    caaactctgaatactanatatga 566
              |||||||||||||||| ||||||
Sbjct: 106215 caaactctgaatactagatatga 106237



 Score =  224 bits (113), Expect = 2e-55
 Identities = 170/189 (89%), Gaps = 5/189 (2%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| |||||||||||| | |||||| ||||||| ||||||||||
Sbjct: 133404 tacttcagcgccgtagcgcctggtactcggacattggctcggggcatttcctctacccct 133463

                                                                          
Query: 212    tcttaccctg-----aaaaagcagggtcaccttgtgtccttaaacctataaccatctttc 266
              ||||||||||     |||||||| |||||||||| |||||| |||| |||||||||||||
Sbjct: 133464 tcttaccctgccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttc 133523

                                                                          
Query: 267    ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 326
              |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||
Sbjct: 133524 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 133583

                       
Query: 327    tgttgtcca 335
              |||||||||
Sbjct: 133584 tgttgtcca 133592



 Score =  224 bits (113), Expect = 2e-55
 Identities = 170/189 (89%), Gaps = 5/189 (2%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| |||||||||||| | |||||| ||||||| ||||||||||
Sbjct: 106878 tacttcagcgccgtagcgcctggtactcggacattggctcggggcatttcctctacccct 106819

                                                                          
Query: 212    tcttaccctg-----aaaaagcagggtcaccttgtgtccttaaacctataaccatctttc 266
              ||||||||||     |||||||| |||||||||| |||||| |||| |||||||||||||
Sbjct: 106818 tcttaccctgccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttc 106759

                                                                          
Query: 267    ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 326
              |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||
Sbjct: 106758 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 106699

                       
Query: 327    tgttgtcca 335
              |||||||||
Sbjct: 106698 tgttgtcca 106690



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133323 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 133382

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 133383 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 133428



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106959 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 106900

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 106899 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 106854

---

>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast
            gene for chloroplast product
          Length = 3322

 Score =  339 bits (171), Expect = 6e-90
 Identities = 193/203 (95%)
 Strand = Plus / Plus

                                                                        
Query: 366  ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1234 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 1293

                                                                        
Query: 426  actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgactgg 485
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1294 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 1353

                                                                        
Query: 486  acatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggca 545
            ||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||||
Sbjct: 1354 acatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggca 1413

                                   
Query: 546  aactctgaatactanatatgacc 568
            |||||||||||||| ||||||||
Sbjct: 1414 aactctgaatactagatatgacc 1436



 Score =  230 bits (116), Expect = 4e-57
 Identities = 168/184 (91%), Gaps = 1/184 (0%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 2078 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 2019

                                                                        
Query: 212  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
            ||||||||||||||| ||||||||||||  |||||| |||| ||||||||||||||||||
Sbjct: 2018 tcttaccctgaaaaa-cagggtcacctttcgtccttgaaccgataaccatctttcggcta 1960

                                                                        
Query: 272  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
            ||||||||||||||||||||| |  || ||||||||||||||||||||||| ||||||||
Sbjct: 1959 acctagcctcctccgtccctcgggccctacaaggggtagtacaggaatattcacctgttg 1900

                
Query: 332  tcca 335
            ||||
Sbjct: 1899 tcca 1896



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2159 ctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 2100

                                                              
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
            ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 2099 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 2054

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  339 bits (171), Expect = 6e-90
 Identities = 193/203 (95%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135443 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 135384

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 135383 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 135324

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 135323 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 135264

                                     
Query: 544    caaactctgaatactanatatga 566
              |||||||||||||||| ||||||
Sbjct: 135263 caaactctgaatactagatatga 135241



 Score =  339 bits (171), Expect = 6e-90
 Identities = 193/203 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106964 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 107023

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 107024 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 107083

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 107084 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 107143

                                     
Query: 544    caaactctgaatactanatatga 566
              |||||||||||||||| ||||||
Sbjct: 107144 caaactctgaatactagatatga 107166



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| ||
Sbjct: 134597 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 134656

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||| ||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 134657 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 134716

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 134717 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 134776

                  
Query: 332    tcca 335
              ||||
Sbjct: 134777 tcca 134780



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| ||
Sbjct: 107810 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 107751

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||| ||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 107750 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 107691

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 107690 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107631

                  
Query: 332    tcca 335
              ||||
Sbjct: 107630 tcca 107627



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134516 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 134575

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 134576 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 134621



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107891 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 107832

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 107831 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 107786

---

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence
          Length = 163935

 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142142 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 142083

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 142082 ccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgact 142023

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 142022 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 141963

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 141962 caaactctgaatactagatatgacc 141938



 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111186 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 111245

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 111246 ccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttgact 111305

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 111306 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 111365

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 111366 caaactctgaatactagatatgacc 111390



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 141296 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 141355

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||| ||||||||| ||||||  || |||||||| ||||||||||||||||||
Sbjct: 141356 tcttaccctgacaaagcagggacaccttacgttcttaaaccgataaccatctttcggcta 141415

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 141416 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 141475

                  
Query: 332    tcca 335
              ||||
Sbjct: 141476 tcca 141479



 Score =  262 bits (132), Expect = 1e-66
 Identities = 171/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 112032 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 111973

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||| ||||||||| ||||||  || |||||||| ||||||||||||||||||
Sbjct: 111972 tcttaccctgacaaagcagggacaccttacgttcttaaaccgataaccatctttcggcta 111913

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 111912 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 111853

                  
Query: 332    tcca 335
              ||||
Sbjct: 111852 tcca 111849



 Score =  161 bits (81), Expect = 3e-36
 Identities = 103/110 (93%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 141215 ctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggtcgttcgagcttt 141274

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    ||||||||||||||||||| |||||
Sbjct: 141275 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcttggta 141320



 Score =  161 bits (81), Expect = 3e-36
 Identities = 103/110 (93%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 112113 ctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggtcgttcgagcttt 112054

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    ||||||||||||||||||| |||||
Sbjct: 112053 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcttggta 112008

---

>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence
          Length = 1750

 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 736 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 795

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 796 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 855

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 856 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 915

                                    
Query: 544 caaactctgaatactanatatgacc 568
           |||||||||||||||| ||||||||
Sbjct: 916 caaactctgaatactagatatgacc 940



 Score =  214 bits (108), Expect = 2e-52
 Identities = 165/184 (89%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 1582 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 1523

                                                                        
Query: 212  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
            | |||||||||| |  | ||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 1522 ttttaccctgaacacaccgggacaccttgcgtccttgaaccgataaccatctttcggcta 1463

                                                                        
Query: 272  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
            ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 1462 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 1403

                
Query: 332  tcca 335
            ||||
Sbjct: 1402 tcca 1399



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1663 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 1604

                                                              
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
            |||||||||||| |||| |||    |||||||||||||||||||||||||
Sbjct: 1603 tcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 1558

---

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 132261 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 132202

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 132201 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 132142

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 132141 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 132082

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 132081 caaactctgaatactagatatgacc 132057



 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 104503 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 104562

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 104563 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 104622

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 104623 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 104682

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 104683 caaactctgaatactagatatgacc 104707



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 131415 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 131474

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||| ||||| ||||||| || ||| |||| ||||||||||||||||||
Sbjct: 131475 tcttaccctgaaaaaacagggacaccttgcgttcttgaaccgataaccatctttcggcta 131534

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 131535 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131594

                  
Query: 332    tcca 335
              ||||
Sbjct: 131595 tcca 131598



 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 105349 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 105290

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||| ||||| ||||||| || ||| |||| ||||||||||||||||||
Sbjct: 105289 tcttaccctgaaaaaacagggacaccttgcgttcttgaaccgataaccatctttcggcta 105230

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 105229 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105170

                  
Query: 332    tcca 335
              ||||
Sbjct: 105169 tcca 105166



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131334 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 131393

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||| |||| |||    |||||||||||||||||||||||||
Sbjct: 131394 tcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 131439



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105430 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 105371

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||| |||| |||    |||||||||||||||||||||||||
Sbjct: 105370 tcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 105325

---

>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2883

 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 816

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 817 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 876

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||||||||||||||||||||| | |||||| ||  |||| | |||||| | |||
Sbjct: 877 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgagg 936

                                    
Query: 544 caaactctgaatactanatatgacc 568
           |||||||||||||||| ||||||||
Sbjct: 937 caaactctgaatactagatatgacc 961



 Score =  137 bits (69), Expect = 4e-29
 Identities = 76/77 (98%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1696 ctacccacctgtgtcggtttcgggtacaggtacc-ttttgttgaaggtcgttcgagcttt 1638

                             
Query: 62   tcctgggagtatggcat 78
            |||||||||||||||||
Sbjct: 1637 tcctgggagtatggcat 1621

---

>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 2902

 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 816

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 817 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 876

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||| ||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 877 ggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 936

                                    
Query: 544 caaactctgaatactanatatgacc 568
           |||||||||||||||| ||||||||
Sbjct: 937 caaactctgaatactaaatatgacc 961



 Score =  129 bits (65), Expect = 1e-26
 Identities = 81/85 (95%), Gaps = 1/85 (1%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcg-agctt 60
            |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||
Sbjct: 1714 ctacccacctgtgtcggtttcgggtaaaggtaaccttttgttgaaggtcgttcgaagctt 1655

                                     
Query: 61   ttcctgggagtatggcatcggttac 85
            |||||||||||||||||| ||||||
Sbjct: 1654 ttcctgggagtatggcatgggttac 1630

---

>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome
          Length = 366924

 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 364920 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 364979

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 364980 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 365039

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 365040 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 365099

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 365100 caaactctgaatactagatatgacc 365124

---

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131130 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 131071

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 131070 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 131011

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
               |||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 131010 agacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 130951

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 130950 caaactctgaatactagatatgacc 130926



 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104264 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 104323

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 104324 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 104383

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
               |||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 104384 agacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 104443

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 104444 caaactctgaatactagatatgacc 104468



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||||| ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 130284 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 130343

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              | ||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 130344 tattaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 130403

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | |||||||| |||||||||||||||||| ||||||||
Sbjct: 130404 acctagcctcctccgtccctcgggaccaacaaagggtagtacaggaatattcacctgttg 130463

                  
Query: 332    tcca 335
              ||||
Sbjct: 130464 tcca 130467



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||||| ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 105110 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 105051

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              | ||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 105050 tattaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 104991

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | |||||||| |||||||||||||||||| ||||||||
Sbjct: 104990 acctagcctcctccgtccctcgggaccaacaaagggtagtacaggaatattcacctgttg 104931

                  
Query: 332    tcca 335
              ||||
Sbjct: 104930 tcca 104927



 Score =  153 bits (77), Expect = 7e-34
 Identities = 102/110 (92%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 130203 ctacccacctgtgtcggtttcgggtacaggtacccatttgttgaaggtcgttcgagcttt 130262

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| | |    ||||||||||| |||||||||||||
Sbjct: 130263 tcctgggagtatggcatggat----tacttcagcgctgtagcgcctggta 130308



 Score =  153 bits (77), Expect = 7e-34
 Identities = 102/110 (92%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 105191 ctacccacctgtgtcggtttcgggtacaggtacccatttgttgaaggtcgttcgagcttt 105132

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| | |    ||||||||||| |||||||||||||
Sbjct: 105131 tcctgggagtatggcatggat----tacttcagcgctgtagcgcctggta 105086

---

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
              strain:Columbia
          Length = 154478

 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 133222 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 133163

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 133162 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 133103

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 133102 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 133043

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 133042 caaactctgaatactagatatgacc 133018



 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 105427 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 105486

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 105487 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 105546

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 105547 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 105606

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 105607 caaactctgaatactagatatgacc 105631



 Score =  246 bits (124), Expect = 7e-62
 Identities = 169/184 (91%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 132376 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 132435

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 132436 tcttaccctgaaaaaacagggacaccttgcgtccttgaaccgataaccatctttcggcta 132495

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 132496 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 132555

                  
Query: 332    tcca 335
              ||||
Sbjct: 132556 tcca 132559



 Score =  246 bits (124), Expect = 7e-62
 Identities = 169/184 (91%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 106273 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 106214

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 106213 tcttaccctgaaaaaacagggacaccttgcgtccttgaaccgataaccatctttcggcta 106154

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 106153 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 106094

                  
Query: 332    tcca 335
              ||||
Sbjct: 106093 tcca 106090



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132295 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 132354

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||| |||| |||    |||||||||||||||||||||||||
Sbjct: 132355 tcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 132400



 Score =  168 bits (85), Expect = 1e-38
 Identities = 104/110 (94%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106354 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 106295

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||| |||| |||    |||||||||||||||||||||||||
Sbjct: 106294 tcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 106249

---

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129793 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 129734

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 129733 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgacc 129674

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 129673 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 129614

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 129613 caaactctgaatactagatatgacc 129589



 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102663 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 102722

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 102723 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgacc 102782

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 102783 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 102842

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 102843 caaactctgaatactagatatgacc 102867



 Score =  246 bits (124), Expect = 7e-62
 Identities = 169/184 (91%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 128947 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 129006

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 129007 tcttaccctgaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 129066

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 129067 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 129126

                  
Query: 332    tcca 335
              ||||
Sbjct: 129127 tcca 129130



 Score =  246 bits (124), Expect = 7e-62
 Identities = 169/184 (91%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 103509 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 103450

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||| ||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 103449 tcttaccctgaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 103390

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 103389 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 103330

                  
Query: 332    tcca 335
              ||||
Sbjct: 103329 tcca 103326



 Score =  163 bits (82), Expect = 8e-37
 Identities = 105/111 (94%), Gaps = 5/111 (4%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtaccctttt-gttgaaggtcgttcgagctt 60
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 128865 ctacccacctgtgtcggtttcgggtacaggtaccctttttgttgaaggtcgttcgagctt 128924

                                                                 
Query: 61     ttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 128925 ttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 128971



 Score =  163 bits (82), Expect = 8e-37
 Identities = 105/111 (94%), Gaps = 5/111 (4%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtaccctttt-gttgaaggtcgttcgagctt 60
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 103591 ctacccacctgtgtcggtttcgggtacaggtaccctttttgttgaaggtcgttcgagctt 103532

                                                                 
Query: 61     ttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              |||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 103531 ttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 103485

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134821 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 134762

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 134761 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 134702

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 134701 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 134642

                                       
Query: 544    caaactctgaatactanatatgacc 568
              ||||||||||||| || ||||||||
Sbjct: 134641 caaactctgaataatagatatgacc 134617



 Score =  335 bits (169), Expect = 9e-89
 Identities = 194/205 (94%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106241 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 106300

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 106301 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 106360

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 106361 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 106420

                                       
Query: 544    caaactctgaatactanatatgacc 568
              ||||||||||||| || ||||||||
Sbjct: 106421 caaactctgaataatagatatgacc 106445



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 133975 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134034

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 134035 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134094

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 134095 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134154

                  
Query: 332    tcca 335
              ||||
Sbjct: 134155 tcca 134158



 Score =  230 bits (116), Expect = 4e-57
 Identities = 167/184 (90%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 107087 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107028

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 107027 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 106968

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | || |||||||||||||||||||||||| ||||||||
Sbjct: 106967 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106908

                  
Query: 332    tcca 335
              ||||
Sbjct: 106907 tcca 106904



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 133894 ctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttt 133953

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 133954 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134000



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 107168 ctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagcttt 107109

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 107108 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107062

---

>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA
           genes, complete sequence; chloroplast
          Length = 3069

 Score =  329 bits (166), Expect = 6e-87
 Identities = 195/206 (94%), Gaps = 1/206 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 812

                                                                       
Query: 424 ccactcgaacccagagctagctggttct-ccccgaaatgcgttgaggcgcagcagntgac 482
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 813 ccactcgaacccagagctagctggttctcccccgaaatgcgttgaggcgcagcagttgac 872

                                                                       
Query: 483 tggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           |||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | ||
Sbjct: 873 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 932

                                     
Query: 543 gcaaactctgaatactanatatgacc 568
           ||||||||||||||||| ||||||||
Sbjct: 933 gcaaactctgaatactagatatgacc 958



 Score =  214 bits (108), Expect = 2e-52
 Identities = 167/184 (90%), Gaps = 2/184 (1%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | ||||| |||| |||| || | ||||||||| |||||||||||||||
Sbjct: 1598 tacttcagcgccgtagcgcctggt-ctcgaacattggctcgaggtattttctctacccct 1540

                                                                        
Query: 212  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
            |||||||||||||| |||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 1539 tcttaccctgaaaa-gcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1481

                                                                        
Query: 272  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
            ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 1480 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 1421

                
Query: 332  tcca 335
            ||||
Sbjct: 1420 tcca 1417



 Score =  151 bits (76), Expect = 3e-33
 Identities = 101/109 (92%), Gaps = 4/109 (3%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1679 ctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 1620

                                                             
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 110
            |||||||||||||||   |||    ||||||||||||||||||||||||
Sbjct: 1619 tcctgggagtatggctagggt----tacttcagcgccgtagcgcctggt 1575

---

>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 3033

 Score =  325 bits (164), Expect = 9e-86
 Identities = 193/204 (94%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 739 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 798

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 799 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 858

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           |||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 859 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 918

                                   
Query: 543 gcaaactctgaatactanatatga 566
           ||||||||||||||||| ||||||
Sbjct: 919 gcaaactctgaatactagatatga 942



 Score =  129 bits (65), Expect = 1e-26
 Identities = 99/110 (90%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 1675 ctacctacctgtgtcggtttcgggtacaggtacccacttgttgaaggtcgttcgagcttt 1616

                                                              
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
            || ||||||| |||||| |||    ||||||||| |||||||||||||||
Sbjct: 1615 tcttgggagtgtggcatgggt----tacttcagcaccgtagcgcctggta 1570



 Score =  123 bits (62), Expect = 7e-25
 Identities = 93/102 (91%), Gaps = 1/102 (0%)
 Strand = Plus / Minus

                                                                        
Query: 235  accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 294
            |||||| |||||| |||| |||||||||| |||||||||||||||||||||||||||| |
Sbjct: 1505 accttgcgtccttgaaccgataaccatctctcggctaacctagcctcctccgtccctcgg 1446

                                                      
Query: 295  taccaacaa-ggggtagtacaggaatattgacctgttgtcca 335
             |||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 1445 gaccaacaagggggtggtacaggaatattcacctgttgtcca 1404



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/69 (86%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||| | | ||||| |||||||||||| | |||| |||| |||||||||||||||
Sbjct: 1594 tacttcagcaccgtagcgcctggtactcggacgttggcttgaggtattttctctacccct 1535

                     
Query: 212  tcttaccct 220
             ||||||||
Sbjct: 1534 ccttaccct 1526

---

>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 3020

 Score =  325 bits (164), Expect = 9e-86
 Identities = 193/204 (94%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 739 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 798

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 799 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 858

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           |||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 859 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 918

                                   
Query: 543 gcaaactctgaatactanatatga 566
           ||||||||||||||||| ||||||
Sbjct: 919 gcaaactctgaatactagatatga 942



 Score =  137 bits (69), Expect = 4e-29
 Identities = 93/101 (92%)
 Strand = Plus / Minus

                                                                        
Query: 235  accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 294
            |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| |
Sbjct: 1504 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 1445

                                                     
Query: 295  taccaacaaggggtagtacaggaatattgacctgttgtcca 335
             ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1444 gaccaacaaggggtagtacaggaatattcacctgttgtcca 1404



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||| |||||||||||||||||||||||||||||  ||||| | |||||||||||||||
Sbjct: 1673 ctacctacctgtgtcggtttcgggtacaggtacccacttgttaatggtcgttcgagcttt 1614

                                    
Query: 62   tcctgggagtatggcatcggttac 85
            || ||| ||| |||||| ||||||
Sbjct: 1613 tcttggaagtgtggcattggttac 1590



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 174  gtactcggacctcggctcgaggcattttctctaccc 209
            |||||| ||| | |||||||||||||||||||||||
Sbjct: 1570 gtactcagacgttggctcgaggcattttctctaccc 1535

---

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score =  325 bits (164), Expect = 9e-86
 Identities = 193/204 (94%), Gaps = 1/204 (0%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 117410 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 117351

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 117350 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 117291

                                                                          
Query: 484    ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              |||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 117290 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 117231

                                      
Query: 543    gcaaactctgaatactanatatga 566
              ||||||||||||||||| ||||||
Sbjct: 117230 gcaaactctgaatactagatatga 117207



 Score =  325 bits (164), Expect = 9e-86
 Identities = 193/204 (94%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 90692 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 90751

                                                                         
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 90752 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 90811

                                                                         
Query: 484   ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
             |||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 90812 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 90871

                                     
Query: 543   gcaaactctgaatactanatatga 566
             ||||||||||||||||| ||||||
Sbjct: 90872 gcaaactctgaatactagatatga 90895



 Score =  137 bits (69), Expect = 4e-29
 Identities = 93/101 (92%)
 Strand = Plus / Plus

                                                                          
Query: 235    accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 294
              |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| |
Sbjct: 116645 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 116704

                                                       
Query: 295    taccaacaaggggtagtacaggaatattgacctgttgtcca 335
               ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 116705 gaccaacaaggggtagtacaggaatattcacctgttgtcca 116745



 Score =  137 bits (69), Expect = 4e-29
 Identities = 93/101 (92%)
 Strand = Plus / Minus

                                                                         
Query: 235   accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 294
             |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| |
Sbjct: 91457 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 91398

                                                      
Query: 295   taccaacaaggggtagtacaggaatattgacctgttgtcca 335
              ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 91397 gaccaacaaggggtagtacaggaatattcacctgttgtcca 91357



 Score =  105 bits (53), Expect = 2e-19
 Identities = 96/110 (87%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||| |||||||||||||||||||||||||||||  ||||| |||||||||||||||||
Sbjct: 116476 ctacctacctgtgtcggtttcgggtacaggtacccacttgttaaaggtcgttcgagcttt 116535

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              || ||| ||| |||||| | |    ||||||||| |||||||||||||||
Sbjct: 116536 tcttggaagtgtggcattgat----tacttcagcaccgtagcgcctggta 116581



 Score =  105 bits (53), Expect = 2e-19
 Identities = 96/110 (87%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||| |||||||||||||||||||||||||||||  ||||| |||||||||||||||||
Sbjct: 91626 ctacctacctgtgtcggtttcgggtacaggtacccacttgttaaaggtcgttcgagcttt 91567

                                                               
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
             || ||| ||| |||||| | |    ||||||||| |||||||||||||||
Sbjct: 91566 tcttggaagtgtggcattgat----tacttcagcaccgtagcgcctggta 91521



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||| | | ||||| |||||||||||| | |||||| |||||||||||||||| |
Sbjct: 116557 tacttcagcaccgtagcgcctggtactcggacgttggctcggggcattttctctaccctt 116616

                     
Query: 212    tcttacc 218
              | |||||
Sbjct: 116617 ttttacc 116623



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                         
Query: 152   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
             ||||||||| | | ||||| |||||||||||| | |||||| |||||||||||||||| |
Sbjct: 91545 tacttcagcaccgtagcgcctggtactcggacgttggctcggggcattttctctaccctt 91486

                    
Query: 212   tcttacc 218
             | |||||
Sbjct: 91485 ttttacc 91479

---

>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial
           sequence; chloroplast
          Length = 673

 Score =  323 bits (163), Expect = 4e-85
 Identities = 186/196 (94%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 281

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 282 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgact 341

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 342 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 401

                           
Query: 544 caaactctgaatacta 559
           ||||||||||||||||
Sbjct: 402 caaactctgaatacta 417

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  323 bits (163), Expect = 4e-85
 Identities = 186/196 (94%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139623 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 139564

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 139563 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgact 139504

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 139503 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 139444

                              
Query: 544    caaactctgaatacta 559
              ||||||||||||||||
Sbjct: 139443 caaactctgaatacta 139428



 Score =  323 bits (163), Expect = 4e-85
 Identities = 186/196 (94%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110437 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 110496

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 110497 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgact 110556

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 110557 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 110616

                              
Query: 544    caaactctgaatacta 559
              ||||||||||||||||
Sbjct: 110617 caaactctgaatacta 110632



 Score =  262 bits (132), Expect = 1e-66
 Identities = 168/180 (93%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 138775 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 138834

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 138835 tcttaccctgaaaaagcagggtcaccttgcgtccttgaaccgataaccatctttcggcta 138894

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 138895 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138954



 Score =  262 bits (132), Expect = 1e-66
 Identities = 168/180 (93%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 111285 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 111226

                                                                          
Query: 212    tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
              ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 111225 tcttaccctgaaaaagcagggtcaccttgcgtccttgaaccgataaccatctttcggcta 111166

                                                                          
Query: 272    acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
              ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 111165 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 111106



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138694 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 138753

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 138754 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 138799



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111366 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 111307

                                                                
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
              ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 111306 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 111261

---

>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S
            ribosomal RNA genes, complete sequence; chloroplast genes
            for chloroplast products
          Length = 5157

 Score =  323 bits (163), Expect = 4e-85
 Identities = 192/203 (94%), Gaps = 1/203 (0%)
 Strand = Plus / Plus

                                                                        
Query: 366  ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg-c 424
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2508 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatggc 2567

                                                                        
Query: 425  cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgactg 484
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 2568 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 2627

                                                                        
Query: 485  gacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggc 544
            |||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | ||||
Sbjct: 2628 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 2687

                                   
Query: 545  aaactctgaatactanatatgac 567
            ||||||||||||||| |||||||
Sbjct: 2688 aaactctgaatactagatatgac 2710



 Score =  222 bits (112), Expect = 1e-54
 Identities = 166/184 (90%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 3352 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 3293

                                                                        
Query: 212  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
            ||||||||||| ||||||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 3292 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 3233

                                                                        
Query: 272  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
            ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 3232 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 3173

                
Query: 332  tcca 335
            ||||
Sbjct: 3172 tcca 3169



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 3433 ctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttt 3374

                                                               
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
            ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 3373 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 3327

---

>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon
          Length = 7920

 Score =  321 bits (162), Expect = 1e-84
 Identities = 193/206 (93%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 5235 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 5294

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5295 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 5354

                                                                        
Query: 484  ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 5355 ggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgagg 5414

                                      
Query: 544  caaactctgaatactanatatgaccc 569
            |||||||||||||||| |||||||||
Sbjct: 5415 caaactctgaatactagatatgaccc 5440



 Score =  165 bits (83), Expect = 2e-37
 Identities = 133/146 (91%), Gaps = 4/146 (2%)
 Strand = Plus / Minus

                                                                        
Query: 194  ggcattttctctacccctt-cttaccctgaaaaag-caggg--tcaccttgtgtccttaa 249
            ||||||||||||||||||| ||||||||||||||  |||||  ||||||| ||| ||| |
Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaaaacagggagtcaccttatgttcttga 5978

                                                                        
Query: 250  acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 309
            ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
Sbjct: 5977 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 5918

                                      
Query: 310  gtacaggaatattgacctgttgtcca 335
            ||||||||||||| ||||||||||||
Sbjct: 5917 gtacaggaatattaacctgttgtcca 5892



 Score =  123 bits (62), Expect = 7e-25
 Identities = 74/78 (94%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||||||||||||||||||| |||||||||||||| |||||| ||||||||||| ||||
Sbjct: 6171 ctacccacctgtgtcggtttccggtacaggtaccctcttgttgtaggtcgttcgaacttt 6112

                              
Query: 62   tcctgggagtatggcatc 79
            ||||||||||||||||||
Sbjct: 6111 tcctgggagtatggcatc 6094

---

>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA
          Length = 7920

 Score =  321 bits (162), Expect = 1e-84
 Identities = 193/206 (93%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 5235 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 5294

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5295 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 5354

                                                                        
Query: 484  ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 5355 ggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgagg 5414

                                      
Query: 544  caaactctgaatactanatatgaccc 569
            |||||||||||||||| |||||||||
Sbjct: 5415 caaactctgaatactagatatgaccc 5440



 Score =  165 bits (83), Expect = 2e-37
 Identities = 133/146 (91%), Gaps = 4/146 (2%)
 Strand = Plus / Minus

                                                                        
Query: 194  ggcattttctctacccctt-cttaccctgaaaaag-caggg--tcaccttgtgtccttaa 249
            ||||||||||||||||||| ||||||||||||||  |||||  ||||||| ||| ||| |
Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaaaacagggagtcaccttatgttcttga 5978

                                                                        
Query: 250  acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 309
            ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
Sbjct: 5977 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 5918

                                      
Query: 310  gtacaggaatattgacctgttgtcca 335
            ||||||||||||| ||||||||||||
Sbjct: 5917 gtacaggaatattaacctgttgtcca 5892



 Score =  123 bits (62), Expect = 7e-25
 Identities = 74/78 (94%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||||||||||||||||||| |||||||||||||| |||||| ||||||||||| ||||
Sbjct: 6171 ctacccacctgtgtcggtttccggtacaggtaccctcttgttgtaggtcgttcgaacttt 6112

                              
Query: 62   tcctgggagtatggcatc 79
            ||||||||||||||||||
Sbjct: 6111 tcctgggagtatggcatc 6094

---

>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence
          Length = 110949

 Score =  319 bits (161), Expect = 6e-84
 Identities = 189/201 (94%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 4967 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 5026

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5027 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 5086

                                                                        
Query: 484  ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 5087 ggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgagg 5146

                                 
Query: 544  caaactctgaatactanatat 564
            |||||||||||||||| ||||
Sbjct: 5147 caaactctgaatactagatat 5167



 Score =  224 bits (113), Expect = 2e-55
 Identities = 168/185 (90%), Gaps = 1/185 (0%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | ||||| | ||||||| |||| |||| ||||||||||||||||||||
Sbjct: 5804 tacttcagcgccggagcgcctcgtactcgaaccttggctggaggcattttctctacccct 5745

                                                                        
Query: 212  tcttaccctgaaaaagcagggt-caccttgtgtccttaaacctataaccatctttcggct 270
            ||||||||||||||| |||||  |||||||||| ||| |||| |||||||||||||||||
Sbjct: 5744 tcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatctttcggct 5685

                                                                        
Query: 271  aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 330
            |||||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||
Sbjct: 5684 aacctagcctcctccgtccctcgggaccaacaagaggtagtacaggaatattcacctgtt 5625

                 
Query: 331  gtcca 335
            |||||
Sbjct: 5624 gtcca 5620



 Score =  139 bits (70), Expect = 1e-29
 Identities = 76/78 (97%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5885 ctacccacctgtgtcggtttcgggtacaggtacccttttgtttaaggtcgttcgagcttt 5826

                              
Query: 62   tcctgggagtatggcatc 79
            || |||||||||||||||
Sbjct: 5825 tcttgggagtatggcatc 5808

---

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  319 bits (161), Expect = 6e-84
 Identities = 189/201 (94%)
 Strand = Plus / Minus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 22958 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 22899

                                                                         
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 22898 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 22839

                                                                         
Query: 484   ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
             ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 22838 ggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgagg 22779

                                  
Query: 544   caaactctgaatactanatat 564
             |||||||||||||||| ||||
Sbjct: 22778 caaactctgaatactagatat 22758



 Score =  224 bits (113), Expect = 2e-55
 Identities = 168/185 (90%), Gaps = 1/185 (0%)
 Strand = Plus / Plus

                                                                         
Query: 152   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
             ||||||||||| | ||||| | ||||||| |||| |||| ||||||||||||||||||||
Sbjct: 22121 tacttcagcgccggagcgcctcgtactcgaaccttggctggaggcattttctctacccct 22180

                                                                         
Query: 212   tcttaccctgaaaaagcagggt-caccttgtgtccttaaacctataaccatctttcggct 270
             ||||||||||||||| |||||  |||||||||| ||| |||| |||||||||||||||||
Sbjct: 22181 tcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatctttcggct 22240

                                                                         
Query: 271   aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 330
             |||||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||||
Sbjct: 22241 aacctagcctcctccgtccctcgggaccaacaagaggtagtacaggaatattcacctgtt 22300

                  
Query: 331   gtcca 335
             |||||
Sbjct: 22301 gtcca 22305



 Score =  139 bits (70), Expect = 1e-29
 Identities = 76/78 (97%)
 Strand = Plus / Plus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 22040 ctacccacctgtgtcggtttcgggtacaggtacccttttgtttaaggtcgttcgagcttt 22099

                               
Query: 62    tcctgggagtatggcatc 79
             || |||||||||||||||
Sbjct: 22100 tcttgggagtatggcatc 22117

---

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score =  317 bits (160), Expect = 2e-83
 Identities = 187/197 (94%), Gaps = 1/197 (0%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 115472 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 115413

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 115412 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 115353

                                                                          
Query: 484    ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              |||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 115352 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 115293

                               
Query: 543    gcaaactctgaatacta 559
              |||||||||||||||||
Sbjct: 115292 gcaaactctgaatacta 115276



 Score =  317 bits (160), Expect = 2e-83
 Identities = 187/197 (94%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 86648 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 86707

                                                                         
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 86708 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 86767

                                                                         
Query: 484   ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
             |||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 86768 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 86827

                              
Query: 543   gcaaactctgaatacta 559
             |||||||||||||||||
Sbjct: 86828 gcaaactctgaatacta 86844



 Score =  125 bits (63), Expect = 2e-25
 Identities = 94/103 (91%), Gaps = 1/103 (0%)
 Strand = Plus / Plus

                                                                          
Query: 233    tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 292
              ||||||||  ||||| |||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 114707 tcaccttgcatccttgaaccgataaccatctttcggctaacctagcctcct-cgtccctc 114765

                                                         
Query: 293    cgtaccaacaaggggtagtacaggaatattgacctgttgtcca 335
               | |||||||||||||||||||||||||||  |||||||||||
Sbjct: 114766 gggaccaacaaggggtagtacaggaatatttgcctgttgtcca 114808



 Score =  125 bits (63), Expect = 2e-25
 Identities = 94/103 (91%), Gaps = 1/103 (0%)
 Strand = Plus / Minus

                                                                         
Query: 233   tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 292
             ||||||||  ||||| |||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 87413 tcaccttgcatccttgaaccgataaccatctttcggctaacctagcctcct-cgtccctc 87355

                                                        
Query: 293   cgtaccaacaaggggtagtacaggaatattgacctgttgtcca 335
              | |||||||||||||||||||||||||||  |||||||||||
Sbjct: 87354 gggaccaacaaggggtagtacaggaatatttgcctgttgtcca 87312



 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||| |||||||||||||||||||||||||||||  ||||| |||||||||||||||||
Sbjct: 114539 ctacctacctgtgtcggtttcgggtacaggtacccacttgtttaaggtcgttcgagcttt 114598

                               
Query: 62     tcctgggagtatggcat 78
              || ||||||| ||||||
Sbjct: 114599 tcttgggagtgtggcat 114615



 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||| |||||||||||||||||||||||||||||  ||||| |||||||||||||||||
Sbjct: 87581 ctacctacctgtgtcggtttcgggtacaggtacccacttgtttaaggtcgttcgagcttt 87522

                              
Query: 62    tcctgggagtatggcat 78
             || ||||||| ||||||
Sbjct: 87521 tcttgggagtgtggcat 87505



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                      
Query: 169    gcttggtactcggacctcggctcgaggcattttctctacc 208
              ||||||||||||||| | |||| || |||||||| |||||
Sbjct: 114636 gcttggtactcggacattggctggaagcattttcactacc 114675



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 169   gcttggtactcggacctcggctcgaggcattttctctacc 208
             ||||||||||||||| | |||| || |||||||| |||||
Sbjct: 87484 gcttggtactcggacattggctggaagcattttcactacc 87445

---

>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 8235

 Score =  317 bits (160), Expect = 2e-83
 Identities = 187/197 (94%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 4628 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 4687

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4688 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 4747

                                                                        
Query: 484  ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
            |||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 4748 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 4807

                             
Query: 543  gcaaactctgaatacta 559
            |||||||||||||||||
Sbjct: 4808 gcaaactctgaatacta 4824



 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Minus

                                                                        
Query: 235  accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 294
            |||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||||||| |
Sbjct: 5397 accttgcgtccttaaaccgataaccatctttcggctaacctaaccttctccgtccctcgg 5338

                                                     
Query: 295  taccaacaaggggtagtacaggaatattgacctgttgtcca 335
             |||||| | || ||||||||||||||| ||||||||||||
Sbjct: 5337 gaccaactaaggatagtacaggaatattcacctgttgtcca 5297



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 96/111 (86%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||| |||||||||||||||||||||||||| ||  ||||| |||||||||||||||||
Sbjct: 5563 ctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagcttt 5504

                                                               
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
            || ||||||| ||||||  ||    ||||||||||||||||| ||| ||||
Sbjct: 5503 tcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagtat 5457

---

>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence
          Length = 2819

 Score =  317 bits (160), Expect = 2e-83
 Identities = 187/197 (94%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 738 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 797

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 798 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 857

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           |||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 858 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 917

                            
Query: 543 gcaaactctgaatacta 559
           |||||||||||||||||
Sbjct: 918 gcaaactctgaatacta 934



 Score =  125 bits (63), Expect = 2e-25
 Identities = 156/186 (83%), Gaps = 2/186 (1%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | ||| | | ||| |||||| | ||||| ||||||||||||||||  |
Sbjct: 1592 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 1533

                                                                        
Query: 212  tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 269
            || |||| || | || |  ||| | |||||| ||||||||||| ||||||||||||||||
Sbjct: 1532 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 1473

                                                                        
Query: 270  taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 329
            ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| ||||||
Sbjct: 1472 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 1413

                  
Query: 330  tgtcca 335
            ||||||
Sbjct: 1412 tgtcca 1407



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 96/111 (86%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||| |||||||||||||||||||||||||| ||  ||||| |||||||||||||||||
Sbjct: 1673 ctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagcttt 1614

                                                               
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
            || ||||||| ||||||  ||    ||||||||||||||||| ||| ||||
Sbjct: 1613 tcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagtat 1567

---

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score =  317 bits (160), Expect = 2e-83
 Identities = 187/197 (94%), Gaps = 1/197 (0%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 150507 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 150448

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 150447 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 150388

                                                                          
Query: 484    ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              |||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 150387 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 150328

                               
Query: 543    gcaaactctgaatacta 559
              |||||||||||||||||
Sbjct: 150327 gcaaactctgaatacta 150311



 Score =  317 bits (160), Expect = 2e-83
 Identities = 187/197 (94%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 118159 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 118218

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 118219 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 118278

                                                                          
Query: 484    ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              |||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 118279 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 118338

                               
Query: 543    gcaaactctgaatacta 559
              |||||||||||||||||
Sbjct: 118339 gcaaactctgaatacta 118355



 Score =  125 bits (63), Expect = 2e-25
 Identities = 156/186 (83%), Gaps = 2/186 (1%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||| | | ||| |||||| | ||||| ||||||||||||||||  |
Sbjct: 149653 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 149712

                                                                          
Query: 212    tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 269
              || |||| || | || |  ||| | |||||| ||||||||||| ||||||||||||||||
Sbjct: 149713 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 149772

                                                                          
Query: 270    taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 329
              ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| ||||||
Sbjct: 149773 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 149832

                    
Query: 330    tgtcca 335
              ||||||
Sbjct: 149833 tgtcca 149838



 Score =  125 bits (63), Expect = 2e-25
 Identities = 156/186 (83%), Gaps = 2/186 (1%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              ||||||||||| | ||| | | ||| |||||| | ||||| ||||||||||||||||  |
Sbjct: 119013 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 118954

                                                                          
Query: 212    tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 269
              || |||| || | || |  ||| | |||||| ||||||||||| ||||||||||||||||
Sbjct: 118953 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 118894

                                                                          
Query: 270    taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 329
              ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| ||||||
Sbjct: 118893 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 118834

                    
Query: 330    tgtcca 335
              ||||||
Sbjct: 118833 tgtcca 118828



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 96/111 (86%), Gaps = 4/111 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||| |||||||||||||||||||||||||| ||  ||||| |||||||||||||||||
Sbjct: 149572 ctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagcttt 149631

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              || ||||||| ||||||  ||    ||||||||||||||||| ||| ||||
Sbjct: 149632 tcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagtat 149678



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 96/111 (86%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||| |||||||||||||||||||||||||| ||  ||||| |||||||||||||||||
Sbjct: 119094 ctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagcttt 119035

                                                                 
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
              || ||||||| ||||||  ||    ||||||||||||||||| ||| ||||
Sbjct: 119034 tcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagtat 118988

---

>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA,
           complete sequence
          Length = 3503

 Score =  317 bits (160), Expect = 2e-83
 Identities = 187/197 (94%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 738 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 797

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 798 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 857

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           |||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 858 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 917

                            
Query: 543 gcaaactctgaatacta 559
           |||||||||||||||||
Sbjct: 918 gcaaactctgaatacta 934



 Score =  125 bits (63), Expect = 2e-25
 Identities = 156/186 (83%), Gaps = 2/186 (1%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | ||| | | ||| |||||| | ||||| ||||||||||||||||  |
Sbjct: 1592 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 1533

                                                                        
Query: 212  tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 269
            || |||| || | || |  ||| | |||||| ||||||||||| ||||||||||||||||
Sbjct: 1532 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 1473

                                                                        
Query: 270  taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 329
            ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| ||||||
Sbjct: 1472 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 1413

                  
Query: 330  tgtcca 335
            ||||||
Sbjct: 1412 tgtcca 1407



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 96/111 (86%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||| |||||||||||||||||||||||||| ||  ||||| |||||||||||||||||
Sbjct: 1673 ctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagcttt 1614

                                                               
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
            || ||||||| ||||||  ||    ||||||||||||||||| ||| ||||
Sbjct: 1613 tcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagtat 1567

---

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score =  315 bits (159), Expect = 9e-83
 Identities = 185/196 (94%)
 Strand = Plus / Minus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51949 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 51890

                                                                         
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 51889 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 51830

                                                                         
Query: 484   ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
             ||||||||||||||||||||||||||| | |||||| |   |||||| |||||| | | |
Sbjct: 51829 ggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaag 51770

                             
Query: 544   caaactctgaatacta 559
             ||||||||||||||||
Sbjct: 51769 caaactctgaatacta 51754



 Score =  315 bits (159), Expect = 9e-83
 Identities = 185/196 (94%)
 Strand = Plus / Plus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37879 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 37938

                                                                         
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 37939 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 37998

                                                                         
Query: 484   ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
             ||||||||||||||||||||||||||| | |||||| |   |||||| |||||| | | |
Sbjct: 37999 ggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaag 38058

                             
Query: 544   caaactctgaatacta 559
             ||||||||||||||||
Sbjct: 38059 caaactctgaatacta 38074



 Score =  155 bits (78), Expect = 2e-34
 Identities = 162/188 (86%), Gaps = 4/188 (2%)
 Strand = Plus / Plus

                                                                         
Query: 152   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
             ||||||||||| | ||||| |||| |||  || | |||||||||||||||||||||||||
Sbjct: 51097 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 51156

                                                                         
Query: 212   t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 267
             |  |||||||||||||| ||||| ||| ||  || ||| |||| |||||||||||||  |
Sbjct: 51157 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 51216

                                                                         
Query: 268   gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 327
             ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| ||||
Sbjct: 51217 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 51276

                     
Query: 328   gttgtcca 335
             ||||||||
Sbjct: 51277 gttgtcca 51284



 Score =  155 bits (78), Expect = 2e-34
 Identities = 162/188 (86%), Gaps = 4/188 (2%)
 Strand = Plus / Minus

                                                                         
Query: 152   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
             ||||||||||| | ||||| |||| |||  || | |||||||||||||||||||||||||
Sbjct: 38731 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 38672

                                                                         
Query: 212   t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 267
             |  |||||||||||||| ||||| ||| ||  || ||| |||| |||||||||||||  |
Sbjct: 38671 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 38612

                                                                         
Query: 268   gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 327
             ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| ||||
Sbjct: 38611 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 38552

                     
Query: 328   gttgtcca 335
             ||||||||
Sbjct: 38551 gttgtcca 38544



 Score =  113 bits (57), Expect = 6e-22
 Identities = 98/110 (89%), Gaps = 5/110 (4%)
 Strand = Plus / Plus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttg-ttgaaggtcgttcgagctt 60
             ||||||||||||||||||||| ||||||||| |||||||| || |||| |||||||||||
Sbjct: 51015 ctacccacctgtgtcggtttcaggtacaggtgcccttttgtttaaaggccgttcgagctt 51074

                                                               
Query: 61    ttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 110
             |||| ||||||||||| | |||    ||||||||||||||||||||||||
Sbjct: 51075 ttcccgggagtatggcgtgggt----tacttcagcgccgtagcgcctggt 51120



 Score =  113 bits (57), Expect = 6e-22
 Identities = 98/110 (89%), Gaps = 5/110 (4%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttg-ttgaaggtcgttcgagctt 60
             ||||||||||||||||||||| ||||||||| |||||||| || |||| |||||||||||
Sbjct: 38813 ctacccacctgtgtcggtttcaggtacaggtgcccttttgtttaaaggccgttcgagctt 38754

                                                               
Query: 61    ttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 110
             |||| ||||||||||| | |||    ||||||||||||||||||||||||
Sbjct: 38753 ttcccgggagtatggcgtgggt----tacttcagcgccgtagcgcctggt 38708

---

>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial
           sequence; chloroplast
          Length = 674

 Score =  315 bits (159), Expect = 9e-83
 Identities = 185/196 (94%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 297

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           || ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 298 ccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgact 357

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 358 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 417

                           
Query: 544 caaactctgaatacta 559
           ||||||||||||||||
Sbjct: 418 caaactctgaatacta 433

---

>emb|X59768.1|CA23SRR C.americana 23S rRNA gene
          Length = 2902

 Score =  315 bits (159), Expect = 9e-83
 Identities = 185/196 (94%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 795

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 796 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 855

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||||||||||||||||||||| | |||||| |   |||||| |||||| | | |
Sbjct: 856 ggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaag 915

                           
Query: 544 caaactctgaatacta 559
           ||||||||||||||||
Sbjct: 916 caaactctgaatacta 931



 Score =  168 bits (85), Expect = 1e-38
 Identities = 131/145 (90%), Gaps = 1/145 (0%)
 Strand = Plus / Minus

                                                                        
Query: 187  ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtcct 246
            ||||||||| |||||||||||||||||||||||||||||| ||||| ||||||  || ||
Sbjct: 1552 ggctcgaggtattttctctaccccttcttaccctgaaaaa-cagggacaccttacgttct 1494

                                                                        
Query: 247  taaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggg 306
            | |||| |||||||||||| |||||||||||||| ||||||||||| | |||||||||||
Sbjct: 1493 tgaaccgataaccatcttttggctaacctagcctgctccgtccctcgggaccaacaaggg 1434

                                     
Query: 307  gtagtacaggaatattgacctgttg 331
            ||||||||| |||||| ||||||||
Sbjct: 1433 gtagtacagaaatattcacctgttg 1409



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 41/42 (97%)
 Strand = Plus / Minus

                                                      
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgtt 43
            |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1681 ctacccacctgtgttggtttcgggtacaggtacccttttgtt 1640



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 58/66 (87%), Gaps = 4/66 (6%)
 Strand = Plus / Minus

                                                                        
Query: 45   aaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcg 104
            |||||| ||||||||||||||||||||||||| | |||    |||||||||||||||| |
Sbjct: 1625 aaggtcattcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagtg 1570

                  
Query: 105  cctggt 110
            ||||||
Sbjct: 1569 cctggt 1564

---

>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes
          Length = 7395

 Score =  315 bits (159), Expect = 9e-83
 Identities = 185/196 (94%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4807 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 4866

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4867 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 4926

                                                                        
Query: 484  ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||||||||||||||||||||||||||| | |||||| |   |||||| |||||| | | |
Sbjct: 4927 ggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaag 4986

                            
Query: 544  caaactctgaatacta 559
            ||||||||||||||||
Sbjct: 4987 caaactctgaatacta 5002



 Score =  155 bits (78), Expect = 2e-34
 Identities = 162/188 (86%), Gaps = 4/188 (2%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | ||||| |||| |||  || | |||||||||||||||||||||||||
Sbjct: 5659 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 5600

                                                                        
Query: 212  t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 267
            |  |||||||||||||| ||||| ||| ||  || ||| |||| |||||||||||||  |
Sbjct: 5599 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 5540

                                                                        
Query: 268  gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 327
            ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| ||||
Sbjct: 5539 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 5480

                    
Query: 328  gttgtcca 335
            ||||||||
Sbjct: 5479 gttgtcca 5472



 Score =  113 bits (57), Expect = 6e-22
 Identities = 98/110 (89%), Gaps = 5/110 (4%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttg-ttgaaggtcgttcgagctt 60
            ||||||||||||||||||||| ||||||||| |||||||| || |||| |||||||||||
Sbjct: 5741 ctacccacctgtgtcggtttcaggtacaggtgcccttttgtttaaaggccgttcgagctt 5682

                                                              
Query: 61   ttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 110
            |||| ||||||||||| | |||    ||||||||||||||||||||||||
Sbjct: 5681 ttcccgggagtatggcgtgggt----tacttcagcgccgtagcgcctggt 5636

---

>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome
          Length = 154373

 Score =  309 bits (156), Expect = 5e-81
 Identities = 186/197 (94%), Gaps = 1/197 (0%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 145820 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 145761

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 145760 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 145701

                                                                          
Query: 484    ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              |||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 145700 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 145641

                               
Query: 543    gcaaactctgaatacta 559
              |||||||||||||||||
Sbjct: 145640 gcaaactctgaatacta 145624



 Score =  309 bits (156), Expect = 5e-81
 Identities = 186/197 (94%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 112642 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 112701

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 112702 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 112761

                                                                          
Query: 484    ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              |||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 112762 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 112821

                               
Query: 543    gcaaactctgaatacta 559
              |||||||||||||||||
Sbjct: 112822 gcaaactctgaatacta 112838



 Score =  161 bits (81), Expect = 3e-36
 Identities = 147/169 (86%), Gaps = 5/169 (2%)
 Strand = Plus / Plus

                                                                          
Query: 172    tggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagg 231
              |||||||||||| | ||||| |||||||||||||||||||||||||| | |||||  | |
Sbjct: 144982 tggtactcggacgttggctcaaggcattttctctaccccttcttacctttaaaaaaaaag 145041

                                                                          
Query: 232    gtc-----accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccg 286
              ||      |||||| |||||| |||| |||||||||| ||||||||| ||||||||||||
Sbjct: 145042 gtttactaaccttgcgtccttgaaccgataaccatctctcggctaacttagcctcctccg 145101

                                                               
Query: 287    tccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 335
              |||||| | ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 145102 tccctcgggaccaacaaggggtagtacaggaatattcacctgttgtcca 145150



 Score =  161 bits (81), Expect = 3e-36
 Identities = 147/169 (86%), Gaps = 5/169 (2%)
 Strand = Plus / Minus

                                                                          
Query: 172    tggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagg 231
              |||||||||||| | ||||| |||||||||||||||||||||||||| | |||||  | |
Sbjct: 113480 tggtactcggacgttggctcaaggcattttctctaccccttcttacctttaaaaaaaaag 113421

                                                                          
Query: 232    gtc-----accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccg 286
              ||      |||||| |||||| |||| |||||||||| ||||||||| ||||||||||||
Sbjct: 113420 gtttactaaccttgcgtccttgaaccgataaccatctctcggctaacttagcctcctccg 113361

                                                               
Query: 287    tccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcca 335
              |||||| | ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 113360 tccctcgggaccaacaaggggtagtacaggaatattcacctgttgtcca 113312



 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||| |||||||||||||||||||||||||||||  | |||||||||||||||||||||
Sbjct: 144881 ctacctacctgtgtcggtttcgggtacaggtacccactcgttgaaggtcgttcgagcttt 144940

                               
Query: 62     tcctgggagtatggcat 78
              || ||||||| ||||||
Sbjct: 144941 tcttgggagtgtggcat 144957



 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||| |||||||||||||||||||||||||||||  | |||||||||||||||||||||
Sbjct: 113581 ctacctacctgtgtcggtttcgggtacaggtacccactcgttgaaggtcgttcgagcttt 113522

                               
Query: 62     tcctgggagtatggcat 78
              || ||||||| ||||||
Sbjct: 113521 tcttgggagtgtggcat 113505

---

>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 2989

 Score =  307 bits (155), Expect = 2e-80
 Identities = 185/196 (94%), Gaps = 1/196 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 743 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 802

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 803 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 862

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
            ||| ||||||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 863 agactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 922

                           
Query: 543 gcaaactctgaatact 558
           ||||||||||||||||
Sbjct: 923 gcaaactctgaatact 938



 Score =  121 bits (61), Expect = 3e-24
 Identities = 85/93 (91%)
 Strand = Plus / Minus

                                                                        
Query: 243  tccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaaca 302
            ||||| |||| ||||||||||||||||||||||||||| ||||||||||| | |||| ||
Sbjct: 1500 tccttgaaccgataaccatctttcggctaacctagcctactccgtccctcgggaccagca 1441

                                             
Query: 303  aggggtagtacaggaatattgacctgttgtcca 335
            ||||||||||||||||||||  |||||||||||
Sbjct: 1440 aggggtagtacaggaatattcgcctgttgtcca 1408



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||| |||||||||||||||||||||||||||||  | | | |||||||||||||||||
Sbjct: 1679 ctacctacctgtgtcggtttcgggtacaggtacccactcgcttaaggtcgttcgagcttt 1620

                             
Query: 62   tcctgggagtatggcat 78
            ||  |||||| ||||||
Sbjct: 1619 tctcgggagtgtggcat 1603

---

>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome
          Length = 430597

 Score =  303 bits (153), Expect = 3e-79
 Identities = 191/205 (93%), Gaps = 1/205 (0%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 177581 gaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaatg 177639

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 177640 ccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 177699

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              ||||||||||||||||||||| ||||| | |||||| ||  |||||| |||||| | |||
Sbjct: 177700 ggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgagg 177759

                                       
Query: 544    caaactctgaatactanatatgacc 568
              |||||||||||||||| ||||||||
Sbjct: 177760 caaactctgaatactagatatgacc 177784



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                   
Query: 249    aacctataaccatctttcggctaacctagcctcctcc 285
              |||| ||||||||||||||||||||||||||||||||
Sbjct: 393104 aaccgataaccatctttcggctaacctagcctcctcc 393068

---

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score =  301 bits (152), Expect = 1e-78
 Identities = 185/197 (93%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 87002 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 87061

                                                                         
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 87062 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 87121

                                                                         
Query: 484   gga-catctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
             ||| |||||||||||||||||||||||| |  ||||| ||  |||||| |||||| | ||
Sbjct: 87122 ggaccatctaggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaatcgag 87181

                              
Query: 543   gcaaactctgaatacta 559
             |||||||||||||||||
Sbjct: 87182 gcaaactctgaatacta 87198



 Score =  254 bits (128), Expect = 3e-64
 Identities = 170/184 (92%), Gaps = 5/184 (2%)
 Strand = Plus / Minus

                                                                         
Query: 152   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
             ||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 87840 tacttcagcgctgtagcgcttggtactcggacattggctcgaggcattttctctacccct 87781

                                                                         
Query: 212   tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
             |||||||||||||     ||||||||||| |||||| |||| ||||||||||||||||||
Sbjct: 87780 tcttaccctgaaa-----gggtcaccttgcgtccttgaaccgataaccatctttcggcta 87726

                                                                         
Query: 272   acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
             ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 87725 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 87666

                 
Query: 332   tcca 335
             ||||
Sbjct: 87665 tcca 87662



 Score =  145 bits (73), Expect = 2e-31
 Identities = 101/110 (91%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 87921 ctacctacctgtgtcggtttcgggtacaggtacccatttgttgaaggtcgttcgagcttt 87862

                                                               
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
             ||||||||||||||||| |||    ||||||||||| ||||||| |||||
Sbjct: 87861 tcctgggagtatggcatgggt----tacttcagcgctgtagcgcttggta 87816

---

>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 2945

 Score =  299 bits (151), Expect = 5e-78
 Identities = 184/196 (93%), Gaps = 1/196 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 725 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 784

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 785 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcaacagttgact 844

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           |||| ||||||||||||||||||||||| | |||||| ||  |||||| |||||| | ||
Sbjct: 845 ggactatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 904

                           
Query: 543 gcaaactctgaatact 558
           ||||||||||||||||
Sbjct: 905 gcaaactctgaatact 920



 Score =  145 bits (73), Expect = 2e-31
 Identities = 94/101 (93%)
 Strand = Plus / Minus

                                                                        
Query: 235  accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 294
            |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1488 accttgagtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 1429

                                                     
Query: 295  taccaacaaggggtagtacaggaatattgacctgttgtcca 335
             |||||||||||||||||||||||||||  |||||||||||
Sbjct: 1428 gaccaacaaggggtagtacaggaatattcgcctgttgtcca 1388



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||| |||||||||||||||||||||||||||||  ||| | |||||||||||||||||
Sbjct: 1634 ctacctacctgtgtcggtttcgggtacaggtacccacttgcttaaggtcgttcgagcttt 1575

                             
Query: 62   tcctgggagtatggcat 78
            || ||||||| ||||||
Sbjct: 1574 tcttgggagtgtggcat 1558



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 52/57 (91%)
 Strand = Plus / Minus

                                                                     
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 208
            ||||||||| | | |||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 1553 tacttcagcaccgtagcgcttggtactcggacgttggctcgaggcattttctctacc 1497

---

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score =  299 bits (151), Expect = 5e-78
 Identities = 192/207 (92%), Gaps = 1/207 (0%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 127702 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 127643

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 127642 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgacc 127583

                                                                          
Query: 484    ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              |||| | ||||||||||||||||||||| | |||||||||   ||||| |||||| | ||
Sbjct: 127582 ggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 127523

                                         
Query: 543    gcaaactctgaatactanatatgaccc 569
              |||||||||||||||||  ||||||||
Sbjct: 127522 gcaaactctgaatactaggtatgaccc 127496



 Score =  299 bits (151), Expect = 5e-78
 Identities = 192/207 (92%), Gaps = 1/207 (0%)
 Strand = Plus / Plus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 95745 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 95804

                                                                         
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 95805 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgacc 95864

                                                                         
Query: 484   ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
             |||| | ||||||||||||||||||||| | |||||||||   ||||| |||||| | ||
Sbjct: 95865 ggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 95924

                                        
Query: 543   gcaaactctgaatactanatatgaccc 569
             |||||||||||||||||  ||||||||
Sbjct: 95925 gcaaactctgaatactaggtatgaccc 95951



 Score =  145 bits (73), Expect = 2e-31
 Identities = 94/101 (93%)
 Strand = Plus / Plus

                                                                          
Query: 235    accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 294
              |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 126938 accttgcgtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 126997

                                                       
Query: 295    taccaacaaggggtagtacaggaatattgacctgttgtcca 335
               |||||||||| |||||||||||||||| ||||||||||||
Sbjct: 126998 gaccaacaaggagtagtacaggaatattcacctgttgtcca 127038



 Score =  145 bits (73), Expect = 2e-31
 Identities = 94/101 (93%)
 Strand = Plus / Minus

                                                                         
Query: 235   accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 294
             |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 96509 accttgcgtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 96450

                                                      
Query: 295   taccaacaaggggtagtacaggaatattgacctgttgtcca 335
              |||||||||| |||||||||||||||| ||||||||||||
Sbjct: 96449 gaccaacaaggagtagtacaggaatattcacctgttgtcca 96409



 Score =  129 bits (65), Expect = 1e-26
 Identities = 96/106 (90%), Gaps = 4/106 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 126772 ctacccacctgtgtcggtttcgggtacaggtacccacttgttgaaggtcgttcgagcttt 126831

                                                            
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 107
              || |||||||||| ||| |||    |||||||||||| ||||||||
Sbjct: 126832 tcttgggagtatgacatgggt----tacttcagcgccatagcgcct 126873



 Score =  129 bits (65), Expect = 1e-26
 Identities = 96/106 (90%), Gaps = 4/106 (3%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||
Sbjct: 96675 ctacccacctgtgtcggtttcgggtacaggtacccacttgttgaaggtcgttcgagcttt 96616

                                                           
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 107
             || |||||||||| ||| |||    |||||||||||| ||||||||
Sbjct: 96615 tcttgggagtatgacatgggt----tacttcagcgccatagcgcct 96574



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              |||||||||||   ||||| | || ||||||| | |||||||||||||||||| ||||||
Sbjct: 126853 tacttcagcgccatagcgcctagtgctcggacgttggctcgaggcattttctccacccct 126912

               
Query: 212    t 212
              |
Sbjct: 126913 t 126913



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                         
Query: 152   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
             |||||||||||   ||||| | || ||||||| | |||||||||||||||||| ||||||
Sbjct: 96594 tacttcagcgccatagcgcctagtgctcggacgttggctcgaggcattttctccacccct 96535

              
Query: 212   t 212
             |
Sbjct: 96534 t 96534

---

>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome
          Length = 150568

 Score =  293 bits (148), Expect = 3e-76
 Identities = 184/197 (93%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 144661 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 144720

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 144721 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 144780

                                                                          
Query: 484    gga-catctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
               || |||||||||||||||||| ||| | | |||||||||  |||||| |||||| | ||
Sbjct: 144781 agaccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgag 144840

                               
Query: 543    gcaaactctgaatacta 559
              |||||||||||||||||
Sbjct: 144841 gcaaactctgaatacta 144857



 Score =  293 bits (148), Expect = 3e-76
 Identities = 184/197 (93%), Gaps = 1/197 (0%)
 Strand = Plus / Minus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 88190 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 88131

                                                                         
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 88130 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 88071

                                                                         
Query: 484   gga-catctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              || |||||||||||||||||| ||| | | |||||||||  |||||| |||||| | ||
Sbjct: 88070 agaccatctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgag 88011

                              
Query: 543   gcaaactctgaatacta 559
             |||||||||||||||||
Sbjct: 88010 gcaaactctgaatacta 87994



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Minus

                                                                          
Query: 242    gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
              |||||| |||| ||||||| ||||||||||||||||||||||||||||||| | ||||||
Sbjct: 145425 gtccttgaaccgataaccacctttcggctaacctagcctcctccgtccctcgggaccaac 145366

                                                
Query: 302    aaggggtagtacaggaatattgacctgttgtcca 335
              |||||| ||||| |||||||| ||| ||||||||
Sbjct: 145365 aaggggcagtacgggaatattaacccgttgtcca 145332



 Score =  115 bits (58), Expect = 2e-22
 Identities = 85/94 (90%)
 Strand = Plus / Plus

                                                                         
Query: 242   gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 301
             |||||| |||| ||||||| ||||||||||||||||||||||||||||||| | ||||||
Sbjct: 87426 gtccttgaaccgataaccacctttcggctaacctagcctcctccgtccctcgggaccaac 87485

                                               
Query: 302   aaggggtagtacaggaatattgacctgttgtcca 335
             |||||| ||||| |||||||| ||| ||||||||
Sbjct: 87486 aaggggcagtacgggaatattaacccgttgtcca 87519



 Score =  113 bits (57), Expect = 6e-22
 Identities = 94/106 (88%), Gaps = 4/106 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              |||||||||||||||||||||||||||||||||||  ||||  |||||||||||||||||
Sbjct: 145584 ctacccacctgtgtcggtttcgggtacaggtacccacttgtcaaaggtcgttcgagcttt 145525

                                                            
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 107
              || ||||||| |||||| |||    |||||| ||||||||||||||
Sbjct: 145524 tcttgggagtgtggcatgggt----tacttcggcgccgtagcgcct 145483



 Score =  113 bits (57), Expect = 6e-22
 Identities = 94/106 (88%), Gaps = 4/106 (3%)
 Strand = Plus / Plus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             |||||||||||||||||||||||||||||||||||  ||||  |||||||||||||||||
Sbjct: 87267 ctacccacctgtgtcggtttcgggtacaggtacccacttgtcaaaggtcgttcgagcttt 87326

                                                           
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 107
             || ||||||| |||||| |||    |||||| ||||||||||||||
Sbjct: 87327 tcttgggagtgtggcatgggt----tacttcggcgccgtagcgcct 87368



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                          
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
              |||||| |||| | ||||| | |||||||||| | |||||||||||||||||||||||||
Sbjct: 145503 tacttcggcgccgtagcgcctagtactcggacgttggctcgaggcattttctctacccct 145444



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                         
Query: 152   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
             |||||| |||| | ||||| | |||||||||| | |||||||||||||||||||||||||
Sbjct: 87348 tacttcggcgccgtagcgcctagtactcggacgttggctcgaggcattttctctacccct 87407

---

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score =  293 bits (148), Expect = 3e-76
 Identities = 184/197 (93%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 89088 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 89147

                                                                         
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 89148 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 89207

                                                                         
Query: 484   gga-catctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
             ||| |||||||||||||||||||||||| |  |||||  |  |||||| |||||| | ||
Sbjct: 89208 ggaccatctaggggtaaagcactgtttcggtacgggccacgagagcggtaccaaatcgag 89267

                              
Query: 543   gcaaactctgaatacta 559
             |||||||||||||||||
Sbjct: 89268 gcaaactctgaatacta 89284



 Score =  244 bits (123), Expect = 3e-61
 Identities = 169/184 (91%), Gaps = 4/184 (2%)
 Strand = Plus / Minus

                                                                         
Query: 152   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
             ||||||||||||| ||||||| |||||||||| | |||||||||||||||||||||||||
Sbjct: 89928 tacttcagcgctgtagcgcttagtactcggacattggctcgaggcattttctctacccct 89869

                                                                         
Query: 212   tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
             ||||||||||||||    |||| |||||| |||||| |||| ||||||||||||||||||
Sbjct: 89868 tcttaccctgaaaa----gggtaaccttgcgtccttgaaccgataaccatctttcggcta 89813

                                                                         
Query: 272   acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
             ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 89812 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 89753

                 
Query: 332   tcca 335
             ||||
Sbjct: 89752 tcca 89749



 Score =  151 bits (76), Expect = 3e-33
 Identities = 82/84 (97%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90009 ctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 89950

                                     
Query: 62    tcctgggagtatggcatcggttac 85
             ||||||||||||||||| ||||||
Sbjct: 89949 tcctgggagtatggcatgggttac 89926

---

>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence;
           chloroplast gene for chloroplast product
          Length = 433

 Score =  283 bits (143), Expect = 3e-73
 Identities = 152/156 (97%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 325

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 326 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgact 385

                                               
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggc 519
           ||||||||||||||||||||||||||| | ||||||
Sbjct: 386 ggacatctaggggtaaagcactgtttcggtgcgggc 421

---

>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence
          Length = 148736

 Score =  272 bits (137), Expect = 1e-69
 Identities = 183/201 (91%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790

                                                                          
Query: 484    ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              |||||| ||||||||||||| |||||| |  ||||| ||  ||||||  ||||| | |||
Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730

                                   
Query: 544    caaactctgaatactanatat 564
              ||||||||||||| || ||||
Sbjct: 141729 caaactctgaatattagatat 141709

---

>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence;
           chloroplast gene for chloroplast product
          Length = 425

 Score =  272 bits (137), Expect = 1e-69
 Identities = 149/154 (96%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 321

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||
Sbjct: 322 ccactcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggttgact 381

                                             
Query: 484 ggacatctaggggtaaagcactgtttcngngcgg 517
           ||||||||||||||||||||||||||| | ||||
Sbjct: 382 ggacatctaggggtaaagcactgtttcggtgcgg 415

---

>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome
          Length = 157089

 Score =  262 bits (132), Expect = 1e-66
 Identities = 180/197 (91%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 855  gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 914

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            |||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 915  ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgact 974

                                                                        
Query: 484  ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
            ||||   ||||||||||||||||||||| | |||||||||   ||||| |||||| | ||
Sbjct: 975  ggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 1034

                             
Query: 543  gcaaactctgaatacta 559
            |||||||||||||||||
Sbjct: 1035 gcaaactctgaatacta 1051



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 65/74 (87%), Gaps = 2/74 (2%)
 Strand = Plus / Minus

                                                                        
Query: 264  ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 321
            |||||||| | ||||||||||||||||||    | || |||||||||||||||||||| |
Sbjct: 1577 ttcggctagcttagcctcctccgtccctcttattgccgacaaggggtagtacaggaatct 1518

                          
Query: 322  tgacctgttgtcca 335
            ||||||||||||||
Sbjct: 1517 tgacctgttgtcca 1504



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                              
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacc 35
            ||||||||||||||||||||||||||||||||||
Sbjct: 1830 ctacccacctgtgtcggtttcgggtacaggtacc 1797

---

>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 2669

 Score =  262 bits (132), Expect = 1e-66
 Identities = 180/197 (91%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 738 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 797

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 798 ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgact 857

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           ||||   ||||||||||||||||||||| | |||||||||   ||||| |||||| | ||
Sbjct: 858 ggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 917

                            
Query: 543 gcaaactctgaatacta 559
           |||||||||||||||||
Sbjct: 918 gcaaactctgaatacta 934



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                             
Query: 2    ctacccacctgtgtcggtttcgggtacaggtac 34
            |||||||||||||||||||||||||||||||||
Sbjct: 1692 ctacccacctgtgtcggtttcgggtacaggtac 1660



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/74 (85%), Gaps = 2/74 (2%)
 Strand = Plus / Minus

                                                                        
Query: 264  ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 321
            |||||||| | ||||||||||||||||||    | || | |||| ||||||||||||| |
Sbjct: 1460 ttcggctagcttagcctcctccgtccctcttattgccgataaggagtagtacaggaatct 1401

                          
Query: 322  tgacctgttgtcca 335
            ||||||||||||||
Sbjct: 1400 tgacctgttgtcca 1387

---

>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 2825

 Score =  262 bits (132), Expect = 1e-66
 Identities = 180/197 (91%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 751 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 810

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 811 ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgact 870

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           ||||   ||||||||||||||||||||| | |||||||||   ||||| |||||| | ||
Sbjct: 871 ggactgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 930

                            
Query: 543 gcaaactctgaatacta 559
           |||||||||||||||||
Sbjct: 931 gcaaactctgaatacta 947



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 33/33 (100%)
 Strand = Plus / Minus

                                             
Query: 2    ctacccacctgtgtcggtttcgggtacaggtac 34
            |||||||||||||||||||||||||||||||||
Sbjct: 1705 ctacccacctgtgtcggtttcgggtacaggtac 1673



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 63/74 (85%), Gaps = 2/74 (2%)
 Strand = Plus / Minus

                                                                        
Query: 264  ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 321
            |||||||| | ||||||||||||||||||    | || | |||| ||||||||||||| |
Sbjct: 1473 ttcggctagcttagcctcctccgtccctcttattgccgataaggagtagtacaggaatct 1414

                          
Query: 322  tgacctgttgtcca 335
            ||||||||||||||
Sbjct: 1413 tgacctgttgtcca 1400

---

>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2754

 Score =  254 bits (128), Expect = 3e-64
 Identities = 184/204 (90%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 814

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           ||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||| | || 
Sbjct: 815 ccaatcgaacccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-acc 873

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
           ||||||||||||||||||||||||||| | |||||   |  |||||| ||||||   |||
Sbjct: 874 ggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgagg 933

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| ||||||||| |||||||
Sbjct: 934 caaactatgaatactagatatgac 957



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                   
Query: 2    ctacccacctgtgtcggtttcgggtacaggtaccctttt 40
            ||||| |||||||| ||||||||||||||||||||||||
Sbjct: 1653 ctacctacctgtgttggtttcgggtacaggtaccctttt 1615



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%), Gaps = 5/66 (7%)
 Strand = Plus / Minus

                                                                        
Query: 270  taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 329
            ||||||||||| ||||||||||| |||     | ||||||||||||||||||| |||| |
Sbjct: 1490 taacctagcctactccgtccctcggta-----agggggtagtacaggaatattaacctat 1436

                  
Query: 330  tgtcca 335
            ||||||
Sbjct: 1435 tgtcca 1430

---

>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 2886

 Score =  252 bits (127), Expect = 1e-63
 Identities = 183/203 (90%), Gaps = 1/203 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 739 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 798

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||| | ||||||||||||||||||||||||||||||||||||||| | | | |
Sbjct: 799 ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaat 858

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           || | || |||||||||||||||||||| | |||||||||   ||||| |||||| | | 
Sbjct: 859 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgat 918

                                  
Query: 543 gcaaactctgaatactanatatg 565
           ||||||||||||||||| |||||
Sbjct: 919 gcaaactctgaatactaaatatg 941



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 2    ctacccacctgtgtcggtttcgggtacagg 31
            |||||||||||||||||||| |||||||||
Sbjct: 1630 ctacccacctgtgtcggttttgggtacagg 1601

---

>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene,
            partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala
            (trnA(ugc)) genes, complete sequence; large subunit
            ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes,
            complete sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 6131

 Score =  252 bits (127), Expect = 1e-63
 Identities = 183/203 (90%), Gaps = 1/203 (0%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3773 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 3832

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            |||||||||| | ||||||||||||||||||||||||||||||||||||||| | | | |
Sbjct: 3833 ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaat 3892

                                                                        
Query: 484  ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
            || | || |||||||||||||||||||| | |||||||||   ||||| |||||| | | 
Sbjct: 3893 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgat 3952

                                   
Query: 543  gcaaactctgaatactanatatg 565
            ||||||||||||||||| |||||
Sbjct: 3953 gcaaactctgaatactaaatatg 3975



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 2    ctacccacctgtgtcggtttcgggtacagg 31
            |||||||||||||||||||| |||||||||
Sbjct: 4664 ctacccacctgtgtcggttttgggtacagg 4635

---

>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 2888

 Score =  252 bits (127), Expect = 1e-63
 Identities = 183/203 (90%), Gaps = 1/203 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 739 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 798

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||| | ||||||||||||||||||||||||||||||||||||||| | | | |
Sbjct: 799 ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaat 858

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           || | || |||||||||||||||||||| | |||||||||   ||||| |||||| | | 
Sbjct: 859 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgat 918

                                  
Query: 543 gcaaactctgaatactanatatg 565
           ||||||||||||||||| |||||
Sbjct: 919 gcaaactctgaatactaaatatg 941



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                      
Query: 235  accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 292
            ||||||| |||||||||| ||||||||| ||||| |||| |||||| |||||||||||
Sbjct: 1484 accttgtatccttaaaccgataaccatcattcggataacttagccttctccgtccctc 1427



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 2    ctacccacctgtgtcggtttcgggtacagg 31
            |||||||||||||||||||| |||||||||
Sbjct: 1630 ctacccacctgtgtcggttttgggtacagg 1601

---

>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA
            (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and
            Ile) genes
          Length = 9493

 Score =  250 bits (126), Expect = 4e-63
 Identities = 144/149 (96%), Gaps = 1/149 (0%)
 Strand = Plus / Minus

                                                                        
Query: 363  agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 422
            |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 5810 agaggtccgaaccgactgatgttgcaaaatcagcggatgagttgtggttaggggtgaaat 5751

                                                                        
Query: 423  gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgac 482
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5750 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5691

                                         
Query: 483  tgga-catctaggggtaaagcactgtttc 510
            |||| | ||||||||||||||||||||||
Sbjct: 5690 tggaccgtctaggggtaaagcactgtttc 5662



 Score =  170 bits (86), Expect = 3e-39
 Identities = 166/190 (87%), Gaps = 7/190 (3%)
 Strand = Plus / Plus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | |||||||| |||||||  || ||| |||||||||||||||||||||
Sbjct: 4975 tacttcagcgccgtagcgcttg-tactcggcgcttggcccgaggcattttctctacccct 5033

                                                                        
Query: 212  tcttaccct----gaaaaa--gcagggtcaccttgtgtccttaaacctataaccatcttt 265
            ||| |||||    ||||||  ||| |||||||||| |||||| |||| |||||||| |||
Sbjct: 5034 tctgaccctccctgaaaaaaggcaaggtcaccttgcgtccttgaaccgataaccattttt 5093

                                                                        
Query: 266  cggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgac 325
            ||||||||||||||||||||||||||| | |||||||| || ||||||||||||||| ||
Sbjct: 5094 cggctaacctagcctcctccgtccctcgggaccaacaaaggatagtacaggaatattcac 5153

                      
Query: 326  ctgttgtcca 335
            ||||||||||
Sbjct: 5154 ctgttgtcca 5163



 Score =  135 bits (68), Expect = 2e-28
 Identities = 71/72 (98%)
 Strand = Plus / Plus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4894 ctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 4953

                        
Query: 62   tcctgggagtat 73
            ||||||||||||
Sbjct: 4954 tcctgggagtat 4965

---

>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 2674

 Score =  246 bits (124), Expect = 7e-62
 Identities = 178/197 (90%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 694 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 753

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||| | |||||||||||||||||||||||||||||||||||||||   ||| |
Sbjct: 754 ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattgatt 813

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           |||| |  |||||||||||||||||||| | |||||||||   ||||| |||||| | ||
Sbjct: 814 ggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 873

                            
Query: 543 gcaaactctgaatacta 559
           |||||||||||||||||
Sbjct: 874 gcaaactctgaatacta 890



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 2    ctacccacctgtgtcggtttcgggtacaggtac 34
            ||||||||||||||||||||| |||||||||||
Sbjct: 1560 ctacccacctgtgtcggtttcaggtacaggtac 1528



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 307  gtagtacaggaatattgacctgttgtcca 335
            |||||||||||||||  ||||||||||||
Sbjct: 1376 gtagtacaggaatataaacctgttgtcca 1348

---

>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon
          Length = 2900

 Score =  246 bits (124), Expect = 7e-62
 Identities = 169/184 (91%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | ||| | ||||||||| || | |||||| ||||||||||||||||||
Sbjct: 1218 tacttcagcgccgtagcacctggtactcgaacattggctcggggcattttctctacccct 1159

                                                                        
Query: 212  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
            ||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||
Sbjct: 1158 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1099

                                                                        
Query: 272  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
            ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||
Sbjct: 1098 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 1039

                
Query: 332  tcca 335
            ||||
Sbjct: 1038 tcca 1035



 Score =  117 bits (59), Expect = 4e-23
 Identities = 97/110 (88%), Gaps = 11/110 (10%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 1292 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc--- 1236

                                                              
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
                ||||||||||||| |||    ||||||||||||||||| |||||||
Sbjct: 1235 ----gggagtatggcatgggt----tacttcagcgccgtagcacctggta 1194

---

>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0577B11
          Length = 180355

 Score =  240 bits (121), Expect = 4e-60
 Identities = 218/249 (87%), Gaps = 6/249 (2%)
 Strand = Plus / Plus

                                                                         
Query: 4     acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 63
             ||||||||||||| ||||| |||||| |||| ||||||||||||||| || |||||||||
Sbjct: 58140 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 58199

                                                                         
Query: 64    ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 123
             |||  |||||||||| |     ||||||||||| | || ||  ||||| |||||||||||
Sbjct: 58200 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 58254

                                                                         
Query: 124   agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 183
               ||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||
Sbjct: 58255 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 58314

                                                                         
Query: 184   ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 243
             || ||||  |||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 58315 cttggcttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgt 58373

                      
Query: 244   ccttaaacc 252
             |||||||||
Sbjct: 58374 ccttaaacc 58382



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                         
Query: 495   ggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctgaa 554
             |||||||||| ||||  | ||||| ||| ||||||| |||||| | || |||||||||||
Sbjct: 59055 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 58996

                              
Query: 555   tactanatatgacccaa 571
             ||||| |||||||||||
Sbjct: 58995 tactagatatgacccaa 58979

---

>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0672D01
          Length = 146954

 Score =  240 bits (121), Expect = 4e-60
 Identities = 218/249 (87%), Gaps = 6/249 (2%)
 Strand = Plus / Plus

                                                                          
Query: 4      acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 63
              ||||||||||||| ||||| |||||| |||| ||||||||||||||| || |||||||||
Sbjct: 135351 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 135410

                                                                          
Query: 64     ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 123
              |||  |||||||||| |     ||||||||||| | || ||  ||||| |||||||||||
Sbjct: 135411 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 135465

                                                                          
Query: 124    agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 183
                ||||||| |||||||||   ||||||||||||||||||||||||||||||||||||||
Sbjct: 135466 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 135525

                                                                          
Query: 184    ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 243
              || ||||  |||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 135526 cttggcttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgt 135584

                       
Query: 244    ccttaaacc 252
              |||||||||
Sbjct: 135585 ccttaaacc 135593



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                          
Query: 495    ggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctgaa 554
              |||||||||| ||||  | ||||| ||| ||||||| |||||| | || |||||||||||
Sbjct: 136266 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 136207

                               
Query: 555    tactanatatgacccaa 571
              ||||| |||||||||||
Sbjct: 136206 tactagatatgacccaa 136190

---

>gb|DQ481232.1| Populus suaveolens unknown gene
          Length = 854

 Score =  238 bits (120), Expect = 2e-59
 Identities = 168/184 (91%)
 Strand = Plus / Minus

                                                                       
Query: 152 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
           ||||||||||| | ||||| ||||||||| || | |||||||||||||||||||||||||
Sbjct: 534 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 475

                                                                       
Query: 212 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
           ||||||||||||||| ||||| |||| || |||||| |||| ||||||||||||||||||
Sbjct: 474 tcttaccctgaaaaaacagggacaccgtgcgtccttgaaccgataaccatctttcggcta 415

                                                                       
Query: 272 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
           ||||||||||||||||||||| | |||||||||||||||||||||||||||  |||||||
Sbjct: 414 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcgcctgttg 355

               
Query: 332 tcca 335
           ||||
Sbjct: 354 tcca 351



 Score =  176 bits (89), Expect = 5e-41
 Identities = 105/110 (95%), Gaps = 4/110 (3%)
 Strand = Plus / Minus

                                                                       
Query: 2   ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 556

                                                             
Query: 62  tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 111
           ||||||||||||||||| |||    |||||||||||||||||||||||||
Sbjct: 555 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 510

---

>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome
          Length = 144170

 Score =  236 bits (119), Expect = 6e-59
 Identities = 176/196 (89%), Gaps = 1/196 (0%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 138529 gaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatg 138470

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              |||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 138469 ccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgact 138410

                                                                          
Query: 484    -ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
               ||  | || | |||||||||||||| | | |||||||||  |||| | |||||| | ||
Sbjct: 138409 aggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgag 138350

                              
Query: 543    gcaaactctgaatact 558
              ||||||||||||||||
Sbjct: 138349 gcaaactctgaatact 138334



 Score =  236 bits (119), Expect = 6e-59
 Identities = 176/196 (89%), Gaps = 1/196 (0%)
 Strand = Plus / Plus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 83348 gaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtgaaatg 83407

                                                                         
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
             |||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 83408 ccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgact 83467

                                                                         
Query: 484   -ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              ||  | || | |||||||||||||| | | |||||||||  |||| | |||||| | ||
Sbjct: 83468 aggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgag 83527

                             
Query: 543   gcaaactctgaatact 558
             ||||||||||||||||
Sbjct: 83528 gcaaactctgaatact 83543



 Score =  107 bits (54), Expect = 4e-20
 Identities = 94/107 (87%), Gaps = 4/107 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||| |||||||||||||  | ||||||||||||||| |||||
Sbjct: 137592 ctacccacctgtgtcggtttcaggtacaggtacccactcgttgaaggtcgttcgggcttt 137651

                                                             
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctg 108
              || ||||||| ||||||  ||    ||||||||||||||||||||||
Sbjct: 137652 tcttgggagtgtggcatgagt----tacttcagcgccgtagcgcctg 137694



 Score =  107 bits (54), Expect = 4e-20
 Identities = 94/107 (87%), Gaps = 4/107 (3%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||| |||||||||||||  | ||||||||||||||| |||||
Sbjct: 84285 ctacccacctgtgtcggtttcaggtacaggtacccactcgttgaaggtcgttcgggcttt 84226

                                                            
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctg 108
             || ||||||| ||||||  ||    ||||||||||||||||||||||
Sbjct: 84225 tcttgggagtgtggcatgagt----tacttcagcgccgtagcgcctg 84183



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 83/93 (89%), Gaps = 2/93 (2%)
 Strand = Plus / Plus

                                                                          
Query: 244    ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgt-accaaca 302
              |||| |||| |||||||||| ||||||||||| |||||||||||||| |||| |||||| 
Sbjct: 137767 ccttgaaccgataaccatctctcggctaacctggcctcctccgtccc-ccgtgaccaacg 137825

                                               
Query: 303    aggggtagtacaggaatattgacctgttgtcca 335
              | ||||||||||||||||||  |||||||||||
Sbjct: 137826 atgggtagtacaggaatattcgcctgttgtcca 137858



 Score = 89.7 bits (45), Expect = 9e-15
 Identities = 83/93 (89%), Gaps = 2/93 (2%)
 Strand = Plus / Minus

                                                                         
Query: 244   ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgt-accaaca 302
             |||| |||| |||||||||| ||||||||||| |||||||||||||| |||| |||||| 
Sbjct: 84110 ccttgaaccgataaccatctctcggctaacctggcctcctccgtccc-ccgtgaccaacg 84052

                                              
Query: 303   aggggtagtacaggaatattgacctgttgtcca 335
             | ||||||||||||||||||  |||||||||||
Sbjct: 84051 atgggtagtacaggaatattcgcctgttgtcca 84019



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                         
Query: 152    tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccc 210
              ||||||||||| | ||||| || ||||||||| | ||||||||||||| ||||||||||
Sbjct: 137673 tacttcagcgccgtagcgcctgctactcggacgttggctcgaggcattctctctacccc 137731



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                        
Query: 152   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccc 210
             ||||||||||| | ||||| || ||||||||| | ||||||||||||| ||||||||||
Sbjct: 84204 tacttcagcgccgtagcgcctgctactcggacgttggctcgaggcattctctctacccc 84146

---

>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes,
            complete sequence; and atp6 pseudogene, partial sequence;
            mitochondrial
          Length = 10403

 Score =  230 bits (116), Expect = 4e-57
 Identities = 173/193 (89%), Gaps = 1/193 (0%)
 Strand = Plus / Minus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3083 gaggtccgaactgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 3024

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            |||||| || ||||||||||||||||||||| ||||||| |||| ||||||||| |||||
Sbjct: 3023 ccactc-aaaccagagctagctggttctccctgaaatgcattgaagcgcagcagttgact 2965

                                                                        
Query: 484  ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||||||||||| ||||||||||||||| | ||||||     |||| | ||||||   |||
Sbjct: 2964 ggacatctaggagtaaagcactgtttcggtgcgggcaatgagagcagtaccaaattgagg 2905

                         
Query: 544  caaactctgaata 556
            |||||||||||||
Sbjct: 2904 caaactctgaata 2892



 Score =  133 bits (67), Expect = 7e-28
 Identities = 154/183 (84%)
 Strand = Plus / Plus

                                                                        
Query: 153  acttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccctt 212
            |||||| || || ||||| ||||||||| || | |||| |||| ||||||||||||||||
Sbjct: 2233 acttcaacgttgtagcgcctggtactcgaacattggcttgaggtattttctctacccctt 2292

                                                                        
Query: 213  cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaa 272
             | ||| | |||||  |||| |||||||  ||||| |||| |||||||| |||| |||||
Sbjct: 2293 ttgaccgtaaaaaaataggggcaccttgcatccttgaaccgataaccatttttctgctaa 2352

                                                                        
Query: 273  cctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgt 332
            ||||||||||||||| |||| | ||||||||| |||||||| |||||||| |||| ||||
Sbjct: 2353 cctagcctcctccgtacctcgggaccaacaagaggtagtactggaatattcacctcttgt 2412

               
Query: 333  cca 335
            |||
Sbjct: 2413 cca 2415



 Score =  121 bits (61), Expect = 3e-24
 Identities = 73/77 (94%)
 Strand = Plus / Plus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2151 ctacctacctgtgttagtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 2210

                             
Query: 62   tcctgggagtatggcat 78
            |||| ||||||||||||
Sbjct: 2211 tcctaggagtatggcat 2227

---

>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene
           for chloroplast product
          Length = 1041

 Score =  230 bits (116), Expect = 4e-57
 Identities = 169/184 (91%), Gaps = 2/184 (1%)
 Strand = Plus / Minus

                                                                       
Query: 152 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
           ||||||||||||| |||||| |||||||| || | |||||||||||||||||||||||||
Sbjct: 850 tacttcagcgctgtagcgct-ggtactcgaactttggctcgaggcattttctctacccct 792

                                                                       
Query: 212 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
           | ||||||||||||||||||| |||| || |||||| |||| ||||||||||||||||||
Sbjct: 791 tattaccctgaaaaagcaggggcaccatgcgtccttgaaccgataaccatctttcggcta 732

                                                                       
Query: 272 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
           |||||||||||||||||||| || |||||||| |||||||||||||||||| ||||||||
Sbjct: 731 acctagcctcctccgtccct-cggaccaacaaagggtagtacaggaatattcacctgttg 673

               
Query: 332 tcca 335
           ||||
Sbjct: 672 tcca 669



 Score =  145 bits (73), Expect = 2e-31
 Identities = 76/77 (98%)
 Strand = Plus / Minus

                                                                       
Query: 2   ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 931 ctacccacctgtgtcggtttcgggtacaggtacccatttgttgaaggtcgttcgagcttt 872

                            
Query: 62  tcctgggagtatggcat 78
           |||||||||||||||||
Sbjct: 871 tcctgggagtatggcat 855

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score =  228 bits (115), Expect = 2e-56
 Identities = 124/127 (97%)
 Strand = Plus / Minus

                                                                          
Query: 2      ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 814524 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 814465

                                                                          
Query: 62     tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
              ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 814464 tcctgggagtatggcatgggttacatacttcagcgccgtagtgcctggtatgagcctcgt 814405

                     
Query: 122    ggagaag 128
              |||||||
Sbjct: 814404 ggagaag 814398



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                
Query: 303     aggggtagtacaggaatattgacctgttgtcca 335
               |||||||||||||| |||||||| |||||||||
Sbjct: 9725496 aggggtagtacaggtatattgacatgttgtcca 9725464



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 40/46 (86%), Gaps = 4/46 (8%)
 Strand = Plus / Minus

                                                              
Query: 117      ctcgtggagaagcaattgctagt----ccacggggctcatacttca 158
                |||||||||||||||| ||||||    | |||||||||||||||||
Sbjct: 30471823 ctcgtggagaagcaatggctagtctagctacggggctcatacttca 30471778



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 354      acgaggagcagaggtccgaaccga 377
                |||||||||||||| |||||||||
Sbjct: 29146634 acgaggagcagaggaccgaaccga 29146611

---

>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1442_E05
          Length = 162407

 Score =  228 bits (115), Expect = 2e-56
 Identities = 124/127 (97%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 23732 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 23673

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 23672 tcctgggagtatggcatgggttacatacttcagcgccgtagtgcctggtatgagcctcgt 23613

                    
Query: 122   ggagaag 128
             |||||||
Sbjct: 23612 ggagaag 23606

---

>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0036E06
          Length = 137926

 Score =  228 bits (115), Expect = 2e-56
 Identities = 124/127 (97%)
 Strand = Plus / Minus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 92655 ctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagcttt 92596

                                                                         
Query: 62    tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgt 121
             ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 92595 tcctgggagtatggcatgggttacatacttcagcgccgtagtgcctggtatgagcctcgt 92536

                    
Query: 122   ggagaag 128
             |||||||
Sbjct: 92535 ggagaag 92529

---

>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2737

 Score =  224 bits (113), Expect = 2e-55
 Identities = 181/205 (88%), Gaps = 1/205 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 801

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           ||| || |||||| |||||| ||||||||||||||||||||| |||||||| || | || 
Sbjct: 802 ccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-acc 860

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            |||||||||||||||||||||||||| |  ||||  ||  |||| | ||||||   |||
Sbjct: 861 agacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgagg 920

                                    
Query: 544 caaactctgaatactanatatgacc 568
           |||||| ||||||||| ||||||||
Sbjct: 921 caaactatgaatactagatatgacc 945



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 243  tccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 292
            ||||| ||||||||||||| ||| || ||||||||||| |||||||||||
Sbjct: 1497 tcctttaacctataaccatattttggttaacctagcctactccgtccctc 1448



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 2    ctacccacctgtgtcggtttcgggtacaggtaccctttt 40
            ||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 1646 ctacctacctgtgttggttttgggtacaggtaccctttt 1608



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 52   ttcgagcttttcctgggagtatggcat 78
            |||||||||||||||||||||| ||||
Sbjct: 1588 ttcgagcttttcctgggagtatagcat 1562



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 188  gctcgaggcattttctctaccccttc 213
            ||||||||||||||||||||| ||||
Sbjct: 1534 gctcgaggcattttctctacctcttc 1509

---

>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 3349

 Score =  220 bits (111), Expect = 4e-54
 Identities = 174/196 (88%), Gaps = 1/196 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||||||
Sbjct: 750 gaggtcccaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatg 809

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||| | ||||||||||||||||||||||||||||||||||||||||  | |||
Sbjct: 810 ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaact 869

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           |||| ||| ||||||||||||||||||| | |||||||||   ||||| |||||| | ||
Sbjct: 870 ggactatccaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 929

                           
Query: 543 gcaaactctgaatact 558
            |||||||||||||||
Sbjct: 930 acaaactctgaatact 945



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 88/103 (85%)
 Strand = Plus / Minus

                                                                        
Query: 233  tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 292
            ||||||||| ||||| |||| || ||||| ||||||| || ||||||| |||||||||||
Sbjct: 1500 tcaccttgtatccttgaaccgatcaccatttttcggccaatctagccttctccgtccctc 1441

                                                       
Query: 293  cgtaccaacaaggggtagtacaggaatattgacctgttgtcca 335
             | || || ||||||| |||||||||||||  |||||||||||
Sbjct: 1440 gggacaaataaggggtggtacaggaatattcgcctgttgtcca 1398

---

>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score =  214 bits (108), Expect = 2e-52
 Identities = 174/197 (88%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            |||| |||||||||||| ||||||| || ||||||||||| |||||||||||||||||||
Sbjct: 1142 gaggcccgaaccgactggtgttgaaaaaccagcggatgagctgtggttaggggtgaaatg 1201

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            |||||||||| | |||||||||||||||||||||||||||||||||||||||   |||||
Sbjct: 1202 ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcgattgact 1261

                                                                        
Query: 484  ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              ||  | |||||||||||||||||||| | |||||||||   ||||| |||||| | ||
Sbjct: 1262 aaactgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 1321

                             
Query: 543  gcaaactctgaatacta 559
            |||||||||||||||||
Sbjct: 1322 gcaaactctgaatacta 1338



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 2    ctacccacctgtgtcggtttcgggtacaggta 33
            ||||||||||||||||||||| ||||||||||
Sbjct: 1989 ctacccacctgtgtcggtttctggtacaggta 1958

---

>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA
           (rrl) gene, complete sequence; chloroplast gene for
           chloroplast product
          Length = 2875

 Score =  214 bits (108), Expect = 2e-52
 Identities = 174/197 (88%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| 
Sbjct: 739 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaaata 798

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           ||| |||||| | ||||||||||||||||||||||||||||||||||||||| | | | |
Sbjct: 799 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaatt 858

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           || |   ||||||||||||||||||||| | |||||||||   ||||| |||||| | ||
Sbjct: 859 gggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 918

                            
Query: 543 gcaaactctgaatacta 559
           |||||||||||||||||
Sbjct: 919 gcaaactctgaatacta 935



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 80/93 (86%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                        
Query: 244  ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 303
            |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | ||||||||
Sbjct: 1481 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 1422

                                             
Query: 304  ggg-gtagtacaggaatattgacctgttgtcca 335
                || ||||||||||||| ||||||||||||
Sbjct: 1421 ataagtggtacaggaatattaacctgttgtcca 1389



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 48   gtcgttcgagcttttcctgggagtatggcatcggttac 85
            |||||||||||||||| |||||||||||||| ||||||
Sbjct: 1589 gtcgttcgagcttttcttgggagtatggcataggttac 1552



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 2    ctacccacctgtgtcggtttcgggtacagg 31
            ||||| ||||||||||||||| ||||||||
Sbjct: 1636 ctacctacctgtgtcggtttcaggtacagg 1607



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 188  gctcgaggcattttctctacc 208
            |||||||||||||||||||||
Sbjct: 1518 gctcgaggcattttctctacc 1498

---

>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 2571

 Score =  212 bits (107), Expect = 9e-52
 Identities = 172/195 (88%), Gaps = 2/195 (1%)
 Strand = Plus / Plus

                                                                       
Query: 367 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 426
           |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 740 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 799

                                                                       
Query: 427 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact--g 484
            |||||| | ||||||||||||||||||||||||||||||||||||||| | ||  |  |
Sbjct: 800 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagg 859

                                                                       
Query: 485 gacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggc 544
           |   |||||||||||||||||||||| | |||||||||  |||||| |||||| | | ||
Sbjct: 860 gctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgc 919

                          
Query: 545 aaactctgaatacta 559
           |||||||||||||||
Sbjct: 920 aaactctgaatacta 934



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 2    ctacccacctgtgtcggtttcgggtacaggtac 34
            ||||| |||||||||||||||||||||||||||
Sbjct: 1634 ctacctacctgtgtcggtttcgggtacaggtac 1602



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 308  tagtacaggaatattgacctgttgtcca 335
            ||||||||||||||| ||||||||||||
Sbjct: 1416 tagtacaggaatattaacctgttgtcca 1389

---

>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome
          Length = 118360

 Score =  212 bits (107), Expect = 9e-52
 Identities = 172/195 (88%), Gaps = 2/195 (1%)
 Strand = Plus / Minus

                                                                          
Query: 367    gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 426
              |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 114922 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 114863

                                                                          
Query: 427    ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact--g 484
               |||||| | ||||||||||||||||||||||||||||||||||||||| | ||  |  |
Sbjct: 114862 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagg 114803

                                                                          
Query: 485    gacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggc 544
              |   |||||||||||||||||||||| | |||||||||  |||||| |||||| | | ||
Sbjct: 114802 gctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgc 114743

                             
Query: 545    aaactctgaatacta 559
              |||||||||||||||
Sbjct: 114742 aaactctgaatacta 114728



 Score =  212 bits (107), Expect = 9e-52
 Identities = 172/195 (88%), Gaps = 2/195 (1%)
 Strand = Plus / Plus

                                                                         
Query: 367   gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 426
             |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 87066 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 87125

                                                                         
Query: 427   ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact--g 484
              |||||| | ||||||||||||||||||||||||||||||||||||||| | ||  |  |
Sbjct: 87126 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggatagg 87185

                                                                         
Query: 485   gacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggc 544
             |   |||||||||||||||||||||| | |||||||||  |||||| |||||| | | ||
Sbjct: 87186 gctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgc 87245

                            
Query: 545   aaactctgaatacta 559
             |||||||||||||||
Sbjct: 87246 aaactctgaatacta 87260



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                               
Query: 2      ctacccacctgtgtcggtttcgggtacaggtac 34
              ||||| |||||||||||||||||||||||||||
Sbjct: 114029 ctacctacctgtgtcggtttcgggtacaggtac 114061



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                              
Query: 2     ctacccacctgtgtcggtttcgggtacaggtac 34
             ||||| |||||||||||||||||||||||||||
Sbjct: 87959 ctacctacctgtgtcggtttcgggtacaggtac 87927



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 308    tagtacaggaatattgacctgttgtcca 335
              ||||||||||||||| ||||||||||||
Sbjct: 114246 tagtacaggaatattaacctgttgtcca 114273



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 308   tagtacaggaatattgacctgttgtcca 335
             ||||||||||||||| ||||||||||||
Sbjct: 87742 tagtacaggaatattaacctgttgtcca 87715

---

>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome
          Length = 191952

 Score =  210 bits (106), Expect = 4e-51
 Identities = 172/195 (88%), Gaps = 1/195 (0%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 189662 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaaatg 189721

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              ||| ||||| || ||||||||||||||||||||||||| ||||||||||||| | |||  
Sbjct: 189722 ccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatg 189781

                                                                          
Query: 484    ggacatc-taggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
                  ||| | |||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 189782 cttaatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 189841

                             
Query: 543    gcaaactctgaatac 557
              |||||||||||||||
Sbjct: 189842 gcaaactctgaatac 189856



 Score =  210 bits (106), Expect = 4e-51
 Identities = 172/195 (88%), Gaps = 1/195 (0%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 151089 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggctaggggtgaaatg 151148

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              ||| ||||| || ||||||||||||||||||||||||| ||||||||||||| | |||  
Sbjct: 151149 ccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatg 151208

                                                                          
Query: 484    ggacatc-taggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
                  ||| | |||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 151209 cttaatcttgggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 151268

                             
Query: 543    gcaaactctgaatac 557
              |||||||||||||||
Sbjct: 151269 gcaaactctgaatac 151283



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 2      ctacccacctgtgtcggtttcgggtacagg 31
              ||||| |||||||||||||| |||||||||
Sbjct: 190547 ctacctacctgtgtcggtttagggtacagg 190518



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 2      ctacccacctgtgtcggtttcgggtacagg 31
              ||||| |||||||||||||| |||||||||
Sbjct: 151974 ctacctacctgtgtcggtttagggtacagg 151945

---

>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence
          Length = 838

 Score =  208 bits (105), Expect = 1e-50
 Identities = 105/105 (100%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 770

                                                        
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgag 468
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ccactcgaacccagagctagctggttctccccgaaatgcgttgag 815

---

>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial
           sequence; chloroplast
          Length = 2661

 Score =  208 bits (105), Expect = 1e-50
 Identities = 160/178 (89%), Gaps = 4/178 (2%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 742 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 801

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgac- 482
           ||| |||||| | ||||||||||||||||||||||||||||||||||||||| | |||| 
Sbjct: 802 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacg 861

                                                                     
Query: 483 --tggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaa 537
             ||| | ||||||||||||||||||||||| | |||||||||  |||||| ||||||
Sbjct: 862 aatgggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 919



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 8    acctgtgtcggtttcgggtacaggt 32
            |||||||||||||||||||||||||
Sbjct: 1684 acctgtgtcggtttcgggtacaggt 1660

---

>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene,
           partial sequence; chloroplast gene for chloroplast
           product
          Length = 2691

 Score =  206 bits (104), Expect = 6e-50
 Identities = 178/204 (87%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||| ||||||| || || |||||||| ||||| |||||||||||||
Sbjct: 701 gaggtccgaaccgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatg 760

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||| | ||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 761 ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgact 820

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
            ||| || |||||||||||||||||||| | ||||||||    | ||| ||||||   | 
Sbjct: 821 agactatttaggggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgat 880

                                   
Query: 543 gcaaactctgaatactanatatga 566
           ||||||||||||||||| ||||||
Sbjct: 881 gcaaactctgaatactaaatatga 904



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 2    ctacccacctgtgtcggtttcgggtacag 30
            ||||||||||||||||||||  |||||||
Sbjct: 1574 ctacccacctgtgtcggttttaggtacag 1546



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 307  gtagtacaggaatattgacctgttgtcca 335
            |||||||||||||||| ||||||| ||||
Sbjct: 1380 gtagtacaggaatattaacctgttatcca 1352

---

>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score =  206 bits (104), Expect = 6e-50
 Identities = 173/197 (87%), Gaps = 1/197 (0%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| 
Sbjct: 124526 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaaata 124467

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              ||| |||||| | ||||||||||||||||||||||||||||||||||||||| | | | |
Sbjct: 124466 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaatt 124407

                                                                          
Query: 484    ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              || |   ||||||||||||||||||||| | |||||||||   ||||| |||||| | ||
Sbjct: 124406 gggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 124347

                               
Query: 543    gcaaactctgaatacta 559
               ||||||||||||||||
Sbjct: 124346 tcaaactctgaatacta 124330



 Score =  206 bits (104), Expect = 6e-50
 Identities = 173/197 (87%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| 
Sbjct: 95340 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaaata 95399

                                                                         
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
             ||| |||||| | ||||||||||||||||||||||||||||||||||||||| | | | |
Sbjct: 95400 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaatt 95459

                                                                         
Query: 484   ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
             || |   ||||||||||||||||||||| | |||||||||   ||||| |||||| | ||
Sbjct: 95460 gggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgag 95519

                              
Query: 543   gcaaactctgaatacta 559
              ||||||||||||||||
Sbjct: 95520 tcaaactctgaatacta 95536



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 80/93 (86%), Gaps = 1/93 (1%)
 Strand = Plus / Plus

                                                                          
Query: 244    ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 303
              |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | ||||||||
Sbjct: 123784 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 123843

                                               
Query: 304    ggg-gtagtacaggaatattgacctgttgtcca 335
                  || ||||||||||||| ||||||||||||
Sbjct: 123844 ataagtggtacaggaatattcacctgttgtcca 123876



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 80/93 (86%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                         
Query: 244   ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 303
             |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | ||||||||
Sbjct: 96082 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 96023

                                              
Query: 304   ggg-gtagtacaggaatattgacctgttgtcca 335
                 || ||||||||||||| ||||||||||||
Sbjct: 96022 ataagtggtacaggaatattcacctgttgtcca 95990



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                    
Query: 48     gtcgttcgagcttttcctgggagtatggcatcggttac 85
              |||||||||||||||| |||||||||||||| ||||||
Sbjct: 123676 gtcgttcgagcttttcttgggagtatggcataggttac 123713



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 48    gtcgttcgagcttttcctgggagtatggcatcggttac 85
             |||||||||||||||| |||||||||||||| ||||||
Sbjct: 96190 gtcgttcgagcttttcttgggagtatggcataggttac 96153



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 2      ctacccacctgtgtcggtttcgggtacagg 31
              ||||| ||||||||||||||| ||||||||
Sbjct: 123629 ctacctacctgtgtcggtttcaggtacagg 123658



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 2     ctacccacctgtgtcggtttcgggtacagg 31
             ||||| ||||||||||||||| ||||||||
Sbjct: 96237 ctacctacctgtgtcggtttcaggtacagg 96208



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 188    gctcgaggcattttctctacc 208
              |||||||||||||||||||||
Sbjct: 123747 gctcgaggcattttctctacc 123767



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 188   gctcgaggcattttctctacc 208
             |||||||||||||||||||||
Sbjct: 96119 gctcgaggcattttctctacc 96099

---

>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA
            gene, 23S rRNA gene (partial) and 5S rRNA gene
          Length = 6689

 Score =  206 bits (104), Expect = 6e-50
 Identities = 165/184 (89%), Gaps = 1/184 (0%)
 Strand = Plus / Minus

                                                                        
Query: 152  tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
            ||||||||||| | ||||| ||||| ||| || | |||||||||||||||||||||||||
Sbjct: 1043 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 984

                                                                        
Query: 212  tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 271
            |||||||||| ||| |||||| ||||||  || ||| |||| ||||||||||||||||||
Sbjct: 983  tcttaccctgcaaa-gcagggacaccttacgttcttgaaccgataaccatctttcggcta 925

                                                                        
Query: 272  acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 331
            ||||||||||||||||||||| | |||||||||||| |||||||||||||| ||||||||
Sbjct: 924  acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 865

                
Query: 332  tcca 335
            ||||
Sbjct: 864  tcca 861



 Score =  202 bits (102), Expect = 9e-49
 Identities = 102/102 (100%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 256

                                                     
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgtt 465
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ccactcgaacccagagctagctggttctccccgaaatgcgtt 298



 Score =  153 bits (77), Expect = 7e-34
 Identities = 77/77 (100%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1701 ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 1642

                             
Query: 62   tcctgggagtatggcat 78
            |||||||||||||||||
Sbjct: 1641 tcctgggagtatggcat 1625



 Score =  147 bits (74), Expect = 5e-32
 Identities = 102/111 (91%), Gaps = 4/111 (3%)
 Strand = Plus / Minus

                                                                        
Query: 2    ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
            |||||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||
Sbjct: 1124 ctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagcttt 1065

                                                               
Query: 62   tcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 112
            ||||||||||||||||| |||    ||||||||||||||||||||||||||
Sbjct: 1064 tcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 1018



 Score =  113 bits (57), Expect = 6e-22
 Identities = 77/86 (89%)
 Strand = Plus / Plus

                                                                       
Query: 483 tggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           |||||||||||||||||||||||||||| | |||||| ||  |||||| |||||| | ||
Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376

                                     
Query: 543 gcaaactctgaatactanatatgacc 568
           ||||||||||||||||| ||||||||
Sbjct: 377 gcaaactctgaatactagatatgacc 402

---

>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 7651

 Score =  204 bits (103), Expect = 2e-49
 Identities = 172/196 (87%), Gaps = 1/196 (0%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||||||
Sbjct: 4788 gaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatg 4847

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            |||||||||| | ||||||||||||||||||||||||||||||||||||||||  | |||
Sbjct: 4848 ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaact 4907

                                                                        
Query: 484  ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
            | || ||| ||||||||||||||||||| | ||||||| |   || || |||||| | ||
Sbjct: 4908 gcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgag 4967

                            
Query: 543  gcaaactctgaatact 558
            ||||||||||||||||
Sbjct: 4968 gcaaactctgaatact 4983



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 88/103 (85%)
 Strand = Plus / Minus

                                                                        
Query: 233  tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 292
            ||||||||  ||||| |||| || ||||| |||||||||| ||||||| |||||||||||
Sbjct: 5538 tcaccttgcatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 5479

                                                       
Query: 293  cgtaccaacaaggggtagtacaggaatattgacctgttgtcca 335
             | || || ||||||| |||||||||||||  |||||||||||
Sbjct: 5478 gggacaaataaggggtggtacaggaatattcgcctgttgtcca 5436

---

>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 3257

 Score =  204 bits (103), Expect = 2e-49
 Identities = 172/196 (87%), Gaps = 1/196 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||||||
Sbjct: 755 gaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatg 814

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||| | ||||||||||||||||||||||||||||||||||||||||  | |||
Sbjct: 815 ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaact 874

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           | || ||| ||||||||||||||||||| | ||||||| |   || || |||||| | ||
Sbjct: 875 gcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgag 934

                           
Query: 543 gcaaactctgaatact 558
           ||||||||||||||||
Sbjct: 935 gcaaactctgaatact 950



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 88/103 (85%)
 Strand = Plus / Minus

                                                                        
Query: 233  tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 292
            ||||||||  ||||| |||| || ||||| |||||||||| ||||||| |||||||||||
Sbjct: 1505 tcaccttgcatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 1446

                                                       
Query: 293  cgtaccaacaaggggtagtacaggaatattgacctgttgtcca 335
             | || || ||||||| |||||||||||||  |||||||||||
Sbjct: 1445 gggacaaataaggggtggtacaggaatattcgcctgttgtcca 1403

---

>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 3277

 Score =  204 bits (103), Expect = 2e-49
 Identities = 172/196 (87%), Gaps = 1/196 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||| ||||||| ||||||||| |||| ||||||||| ||||||||| |||||||||
Sbjct: 755 gaggtccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatg 814

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
           |||||||||| | ||||||||||||||||||||||||||||||||||||||||  | |||
Sbjct: 815 ccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaact 874

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
           | || ||| ||||||||||||||||||| | ||||||| |   || || |||||| | ||
Sbjct: 875 gcactatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgag 934

                           
Query: 543 gcaaactctgaatact 558
           ||||||||||||||||
Sbjct: 935 gcaaactctgaatact 950



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 89/103 (86%)
 Strand = Plus / Minus

                                                                        
Query: 233  tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 292
            ||||||||| ||||| |||| || ||||| |||||||||| ||||||| |||||||||||
Sbjct: 1505 tcaccttgtatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 1446

                                                       
Query: 293  cgtaccaacaaggggtagtacaggaatattgacctgttgtcca 335
             | || || ||||||| |||||||||||||  |||||||||||
Sbjct: 1445 gggacaaataaggggtggtacaggaatattcgcctgttgtcca 1403

---

>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome
          Length = 569630

 Score =  202 bits (102), Expect = 9e-49
 Identities = 102/102 (100%)
 Strand = Plus / Minus

                                                                         
Query: 360   agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74961 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 74902

                                                       
Query: 420   aatgccactcgaacccagagctagctggttctccccgaaatg 461
             ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74901 aatgccactcgaacccagagctagctggttctccccgaaatg 74860

---

>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete
              genome
          Length = 701046

 Score =  202 bits (102), Expect = 9e-49
 Identities = 102/102 (100%)
 Strand = Plus / Plus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382577 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 382636

                                                        
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatg 461
              ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382637 aatgccactcgaacccagagctagctggttctccccgaaatg 382678

---

>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome
          Length = 569553

 Score =  202 bits (102), Expect = 9e-49
 Identities = 102/102 (100%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113052 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 112993

                                                        
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatg 461
              ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112992 aatgccactcgaacccagagctagctggttctccccgaaatg 112951

---

>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2716

 Score =  202 bits (102), Expect = 9e-49
 Identities = 176/202 (87%), Gaps = 1/202 (0%)
 Strand = Plus / Plus

                                                                       
Query: 366 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 425
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ggtctgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 791

                                                                       
Query: 426 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgactgg 485
           | ||||||||| ||||||||||||| ||||||||||| || ||||||||||| | || ||
Sbjct: 792 aatcgaacccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt-accgg 850

                                                                       
Query: 486 acatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggca 545
            ||||||||||||||||| |||||  | |||||   |  |||||| ||||||   |||||
Sbjct: 851 gcatctaggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgaggca 910

                                 
Query: 546 aactctgaatactanatatgac 567
            ||| ||||||||| |||||||
Sbjct: 911 gactatgaatactagatatgac 932



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 2    ctacccacctgtgtcggtttcgggtacaggtaccctttt 40
            ||||| || ||||| ||||||||||| ||||||||||||
Sbjct: 1621 ctacctacttgtgttggtttcgggtataggtaccctttt 1583



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 52   ttcgagcttttcctgggagtat 73
            ||||||||||||||||||||||
Sbjct: 1572 ttcgagcttttcctgggagtat 1551



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 189  ctcgaggcattttctctaccccttc 213
            |||||||||||||||||||| ||||
Sbjct: 1518 ctcgaggcattttctctacctcttc 1494

---

>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome
          Length = 535825

 Score =  202 bits (102), Expect = 9e-49
 Identities = 105/106 (99%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367734 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 367675

                                                            
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgtt 465
              ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 367674 aatgccactcgaacccagagctagctggttctccccgaaattcgtt 367629



 Score =  202 bits (102), Expect = 9e-49
 Identities = 105/106 (99%)
 Strand = Plus / Minus

                                                                          
Query: 360    agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 419
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184339 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 184280

                                                            
Query: 420    aatgccactcgaacccagagctagctggttctccccgaaatgcgtt 465
              ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 184279 aatgccactcgaacccagagctagctggttctccccgaaattcgtt 184234

---

>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome
          Length = 191028

 Score =  202 bits (102), Expect = 9e-49
 Identities = 174/198 (87%), Gaps = 3/198 (1%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              |||||||||||||||| |||||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 188739 gaggtccgaaccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatg 188798

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntga-- 481
              ||| ||||| || ||||||||||||||||||||||||| ||||||||||||| | |||  
Sbjct: 188799 ccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatg 188858

                                                                          
Query: 482    ctggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancna 541
              ||  | |  |||||||||||||||||||| | |||||||||  |||||| |||||| | |
Sbjct: 188859 ct-taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 188917

                                
Query: 542    ggcaaactctgaatacta 559
              ||||||||||||||||||
Sbjct: 188918 ggcaaactctgaatacta 188935



 Score =  194 bits (98), Expect = 2e-46
 Identities = 173/198 (87%), Gaps = 3/198 (1%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||| |||||| |||||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 150296 gaggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatg 150355

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntga-- 481
              ||| ||||| || ||||||||||||||||||||||||| ||||||||||||| | |||  
Sbjct: 150356 ccaatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatg 150415

                                                                          
Query: 482    ctggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancna 541
              ||  | |  |||||||||||||||||||| | |||||||||  |||||| |||||| | |
Sbjct: 150416 ct-taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 150474

                                
Query: 542    ggcaaactctgaatacta 559
              ||||||||||||||||||
Sbjct: 150475 ggcaaactctgaatacta 150492



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 3      tacccacctgtgtcggtttcgggtacaggta 33
              |||| |||||||||||||| |||||||||||
Sbjct: 189623 tacctacctgtgtcggtttagggtacaggta 189593



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 3      tacccacctgtgtcggtttcgggtacagg 31
              |||| |||||||||||||| |||||||||
Sbjct: 151180 tacctacctgtgtcggtttagggtacagg 151152

---

>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome
          Length = 22085

 Score =  200 bits (101), Expect = 4e-48
 Identities = 179/205 (87%), Gaps = 2/205 (0%)
 Strand = Plus / Plus

                                                                        
Query: 365  aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 424
            |||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| |
Sbjct: 6433 aggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatac 6492

                                                                        
Query: 425  cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntga-ct 483
            || |||||||| |||||||||||||||||||||||||||||||||||||||||   | ||
Sbjct: 6493 cagtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatct 6552

                                                                        
Query: 484  ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
             | | ||||||||||||||||||||||| | ||||||||   || ||| |||||| |  |
Sbjct: 6553 agtctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtg 6612

                                     
Query: 543  gcaaactctgaatactanatatgac 567
            ||||||||||||||||| | |||||
Sbjct: 6613 gcaaactctgaatactagaaatgac 6637



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 2    ctacccacctgtgtcggtttcgggtacaggta 33
            ||||||||||||||||||||  ||||||||||
Sbjct: 7383 ctacccacctgtgtcggtttatggtacaggta 7352

---

>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA
            genecluster
          Length = 5001

 Score =  200 bits (101), Expect = 4e-48
 Identities = 179/205 (87%), Gaps = 2/205 (0%)
 Strand = Plus / Plus

                                                                        
Query: 365  aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 424
            |||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| |
Sbjct: 3496 aggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatac 3555

                                                                        
Query: 425  cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntga-ct 483
            || |||||||| |||||||||||||||||||||||||||||||||||||||||   | ||
Sbjct: 3556 cagtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatct 3615

                                                                        
Query: 484  ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
             | | ||||||||||||||||||||||| | ||||||||   || ||| |||||| |  |
Sbjct: 3616 agtctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtg 3675

                                     
Query: 543  gcaaactctgaatactanatatgac 567
            ||||||||||||||||| | |||||
Sbjct: 3676 gcaaactctgaatactagaaatgac 3700



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 2    ctacccacctgtgtcggtttcgggtacaggta 33
            ||||||||||||||||||||  ||||||||||
Sbjct: 4444 ctacccacctgtgtcggtttatggtacaggta 4413

---

>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene,
           partial sequence; chloroplast gene for chloroplast
           product
          Length = 2715

 Score =  200 bits (101), Expect = 4e-48
 Identities = 179/205 (87%), Gaps = 2/205 (0%)
 Strand = Plus / Plus

                                                                       
Query: 365 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 424
           |||||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| |
Sbjct: 784 aggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatac 843

                                                                       
Query: 425 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntga-ct 483
           || |||||||| |||||||||||||||||||||||||||||||||||||||||   | ||
Sbjct: 844 cagtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatct 903

                                                                       
Query: 484 ggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
            | | ||||||||||||||||||||||| | ||||||||   || ||| |||||| |  |
Sbjct: 904 agtctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtg 963

                                    
Query: 543 gcaaactctgaatactanatatgac 567
           ||||||||||||||||| | |||||
Sbjct: 964 gcaaactctgaatactagaaatgac 988



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 2    ctacccacctgtgtcggtttcgggtacaggta 33
            ||||||||||||||||||||  ||||||||||
Sbjct: 1734 ctacccacctgtgtcggtttatggtacaggta 1703

---

>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2689

 Score =  198 bits (100), Expect = 1e-47
 Identities = 177/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | || 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-acc 836

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 837 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 896

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 897 caaactatgaatattagatatgac 920



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1591 acctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  198 bits (100), Expect = 1e-47
 Identities = 177/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | || 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-acc 836

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 837 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 896

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 897 caaactatgaatattagatatgac 920



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1591 acctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  198 bits (100), Expect = 1e-47
 Identities = 177/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | || 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-acc 836

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 837 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 896

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 897 caaactatgaatattagatatgac 920



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1591 acctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  198 bits (100), Expect = 1e-47
 Identities = 177/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | || 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-acc 836

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 837 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 896

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 897 caaactatgaatattagatatgac 920



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1591 acctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  198 bits (100), Expect = 1e-47
 Identities = 177/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | || 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-acc 836

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 837 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 896

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 897 caaactatgaatattagatatgac 920



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 8    acctgtgtcggtttcgggtacaggtaccc 36
            |||||||| |||||| |||||||||||||
Sbjct: 1591 acctgtgttggtttcaggtacaggtaccc 1563

---

>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  198 bits (100), Expect = 1e-47
 Identities = 177/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | || 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-acc 836

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 837 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 896

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 897 caaactatgaatattagatatgac 920



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1591 acctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2696

 Score =  198 bits (100), Expect = 1e-47
 Identities = 177/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 776

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | || 
Sbjct: 777 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-acc 835

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 836 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 895

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 896 caaactatgaatattagatatgac 919



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1590 acctgtgttggtttcaggtacaggtaccctttt 1558

---

>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  198 bits (100), Expect = 1e-47
 Identities = 177/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | || 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-acc 836

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 837 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 896

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 897 caaactatgaatattagatatgac 920



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1591 acctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  198 bits (100), Expect = 1e-47
 Identities = 177/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | || 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-acc 836

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 837 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 896

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 897 caaactatgaatattagatatgac 920



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1591 acctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  198 bits (100), Expect = 1e-47
 Identities = 177/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | || 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-acc 836

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 837 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 896

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 897 caaactatgaatattagatatgac 920



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1591 acctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  198 bits (100), Expect = 1e-47
 Identities = 177/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | || 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-acc 836

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 837 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 896

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 897 caaactatgaatattagatatgac 920



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1591 acctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2689

 Score =  198 bits (100), Expect = 1e-47
 Identities = 177/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | || 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-acc 836

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 837 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 896

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 897 caaactatgaatattagatatgac 920



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1590 acctgtgttggtttcaggtacaggtaccctttt 1558

---

>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94
          Length = 4290

 Score =  196 bits (99), Expect = 6e-47
 Identities = 172/196 (87%), Gaps = 2/196 (1%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 2296 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatg 2355

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            ||| ||||| || ||||||||||||||||||||||||||||||||||||||| | | | |
Sbjct: 2356 ccaatcgaatccggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaat 2415

                                                                        
Query: 484  ggacatctagggg-taaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              | | || |||| |||||||||||||| | |||||||||   ||||| |||||| | | 
Sbjct: 2416 tta-agcttgggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgat 2474

                            
Query: 543  gcaaactctgaatact 558
            ||||||||||||||||
Sbjct: 2475 gcaaactctgaatact 2490



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 2    ctacccacctgtgtcggtttcgggtacagg 31
            ||||| ||||||||||||||||||||||||
Sbjct: 3177 ctacctacctgtgtcggtttcgggtacagg 3148

---

>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0073M15, complete sequence
          Length = 143071

 Score =  194 bits (98), Expect = 2e-46
 Identities = 104/106 (98%)
 Strand = Plus / Minus

                                                                         
Query: 38    tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 97
             ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 24880 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 24821

                                                           
Query: 98    cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccac 143
             ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 24820 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccac 24775

---

>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 7514

 Score =  194 bits (98), Expect = 2e-46
 Identities = 155/173 (89%), Gaps = 2/173 (1%)
 Strand = Plus / Plus

                                                                        
Query: 367  gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 426
            |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 891  gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 950

                                                                        
Query: 427  ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgac-tgg 485
             |||||| | ||||||||||||||||||||||||||||||||||||||| | | || |||
Sbjct: 951  atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtgg 1010

                                                                 
Query: 486  ac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaa 537
             |  |||||||||||||||||||||| | |||||||||  |||||| ||||||
Sbjct: 1011 gcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 1063

---

>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2689

 Score =  192 bits (97), Expect = 9e-46
 Identities = 176/204 (86%), Gaps = 2/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| |||   | || 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc--gttacc 835

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 836 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 895

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 896 caaactatgaatattagatatgac 919



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1590 acctgtgttggtttcaggtacaggtaccctttt 1558

---

>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2689

 Score =  190 bits (96), Expect = 3e-45
 Identities = 176/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 776

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | || 
Sbjct: 777 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-acc 835

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 836 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 895

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 896 caaactatgaatattagatatgac 919



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1590 acctgtgttggtttcaggtacaggtaccctttt 1558

---

>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  190 bits (96), Expect = 3e-45
 Identities = 176/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||  | | || 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-acc 836

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 837 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 896

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 897 caaactatgaatattagatatgac 920



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1591 acctgtgttggtttcaggtacaggtaccctttt 1559



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 304  ggggtagtacaggaatattgacctgttgtcca 335
            ||||||||||| ||||||| |||| |||||||
Sbjct: 1408 ggggtagtacaagaatattaacctattgtcca 1377

---

>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene,
           partial sequence; chloroplast gene for chloroplast
           product
          Length = 2834

 Score =  190 bits (96), Expect = 3e-45
 Identities = 155/174 (89%), Gaps = 3/174 (1%)
 Strand = Plus / Plus

                                                                       
Query: 367 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 426
           |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 809 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcca 868

                                                                       
Query: 427 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntga-ctgg 485
            |||||||| ||||||||||||||||||||||||||||||||||||||| | |||  | |
Sbjct: 869 atcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttg 928

                                                                 
Query: 486 acat--ctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaa 537
           |  |  ||||||||||||||||||||| | |||||||||  |||||| ||||||
Sbjct: 929 agctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 982



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 308  tagtacaggaatattgacctgttgtcca 335
            ||||||||||||||| ||||||| ||||
Sbjct: 1602 tagtacaggaatattaacctgttttcca 1575

---

>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene
          Length = 4870

 Score =  190 bits (96), Expect = 3e-45
 Identities = 171/197 (86%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 2499 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatg 2558

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            ||| ||||| || |||||||||||||||||||||||||||||  |||||||| | |||  
Sbjct: 2559 ccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttgatg 2618

                                                                        
Query: 484  ggacatc-taggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              | | | |||||||||||||||||||| |  |||||||    ||||| |||||| | ||
Sbjct: 2619 ctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcgag 2678

                             
Query: 543  gcaaactctgaatacta 559
            |||||||||||||||||
Sbjct: 2679 gcaaactctgaatacta 2695



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 2    ctacccacctgtgtcggtttcgggtacaggt 32
            ||||| |||||||||||||||||||||||||
Sbjct: 3382 ctacctacctgtgtcggtttcgggtacaggt 3352

---

>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1,
            strain SAG 34.90
          Length = 4586

 Score =  190 bits (96), Expect = 3e-45
 Identities = 171/197 (86%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            |||| |||||||||  ||||||||| ||||  ||||||||||||||||||||||||||||
Sbjct: 2556 gaggcccgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatg 2615

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntga-c 482
            ||| |||||||| ||||||||||||||||||||||||||||||||||||||| | |||  
Sbjct: 2616 ccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatg 2675

                                                                        
Query: 483  tggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
            |    || |||||||||||||||||||| | ||||||| |  ||| || |||||| | ||
Sbjct: 2676 ttataatttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgag 2735

                             
Query: 543  gcaaactctgaatacta 559
            |||||||||||||||||
Sbjct: 2736 gcaaactctgaatacta 2752



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 2    ctacccacctgtgtcggtttcgggtaca 29
            |||||||||||||||||||| |||||||
Sbjct: 3491 ctacccacctgtgtcggtttggggtaca 3464

---

>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome
          Length = 135599

 Score =  190 bits (96), Expect = 3e-45
 Identities = 171/197 (86%), Gaps = 1/197 (0%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||||
Sbjct: 114692 gaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaatg 114633

                                                                          
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
              ||| |||||||| ||||||||||||||||||||||||| ||||||||||||| | |||  
Sbjct: 114632 ccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgaga 114573

                                                                          
Query: 484    ggacatc-taggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
                | | | |||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 114572 ttataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 114513

                               
Query: 543    gcaaactctgaatacta 559
              |||||||||||||||||
Sbjct: 114512 gcaaactctgaatacta 114496



 Score =  190 bits (96), Expect = 3e-45
 Identities = 171/197 (86%), Gaps = 1/197 (0%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||||
Sbjct: 2825 gaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaatg 2884

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            ||| |||||||| ||||||||||||||||||||||||| ||||||||||||| | |||  
Sbjct: 2885 ccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgaga 2944

                                                                        
Query: 484  ggacatc-taggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnag 542
              | | | |||||||||||||||||||| | |||||||||  |||||| |||||| | ||
Sbjct: 2945 ttataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 3004

                             
Query: 543  gcaaactctgaatacta 559
            |||||||||||||||||
Sbjct: 3005 gcaaactctgaatacta 3021



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 3      tacccacctgtgtcggtttcgggtacagg 31
              ||||||||||||||||||| |||||||||
Sbjct: 113767 tacccacctgtgtcggttttgggtacagg 113795



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 3    tacccacctgtgtcggtttcgggtacagg 31
            ||||||||||||||||||| |||||||||
Sbjct: 3750 tacccacctgtgtcggttttgggtacagg 3722

---

>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA
           gene, partial sequence; chloroplast gene for chloroplast
           product
          Length = 2690

 Score =  188 bits (95), Expect = 1e-44
 Identities = 176/204 (86%), Gaps = 1/204 (0%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 777

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | |  | 
Sbjct: 778 tcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg-tatcc 836

                                                                       
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
            ||| ||||||||||||||||| |||| | || ||  ||  |||||| ||||||   |||
Sbjct: 837 agacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgagg 896

                                   
Query: 544 caaactctgaatactanatatgac 567
           |||||| |||||| || |||||||
Sbjct: 897 caaactatgaatattagatatgac 920



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 8    acctgtgtcggtttcgggtacaggtaccctttt 40
            |||||||| |||||| |||||||||||||||||
Sbjct: 1591 acctgtgttggtttcaggtacaggtaccctttt 1559

---

>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL)
            gene
          Length = 5398

 Score =  188 bits (95), Expect = 1e-44
 Identities = 157/177 (88%), Gaps = 3/177 (1%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 873  gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 932

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgac- 482
            ||| |||||||  ||||||||||| ||||||||||||||||||||||||||| | | || 
Sbjct: 933  ccaatcgaacctggagctagctggatctccccgaaatgcgttgaggcgcagcggttaacg 992

                                                                     
Query: 483  -tggac-atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaa 537
             ||| |  |||||||||||||||||||||| | |||||||||  |||||| ||||||
Sbjct: 993  atgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 1049



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 2    ctacccacctgtgtcggtttcgggtacaggta 33
            ||||| ||||||||||||||||||||| ||||
Sbjct: 1810 ctacctacctgtgtcggtttcgggtacgggta 1779

---

>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13
             of library OSJNBa from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 104259

 Score =  188 bits (95), Expect = 1e-44
 Identities = 101/103 (98%)
 Strand = Plus / Minus

                                                                         
Query: 142   acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 201
             |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 15893 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 15834

                                                        
Query: 202   ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 244
             |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15833 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 15791

---

>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene,
            partial sequence; 16S-23S ribosomal RNA intergenic
            spacer, tRNA-Ile and tRNA-Ala genes, complete sequence;
            and 23S ribosomal RNA gene, partial sequence
          Length = 3434

 Score =  182 bits (92), Expect = 8e-43
 Identities = 107/112 (95%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2440 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2499

                                                                
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
            ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 2500 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2551



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                        
Query: 493  ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
            |||||||||||||||||| | ||||||||   || ||| |||||| | || ||||||| |
Sbjct: 2570 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2629

                 
Query: 553  aatac 557
            |||||
Sbjct: 2630 aatac 2634



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 8    acctgtgtcggtttcgggtacaggta 33
            ||||||||||||||||||||| ||||
Sbjct: 3262 acctgtgtcggtttcgggtacgggta 3237

---

>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL)
           gene
          Length = 3334

 Score =  182 bits (92), Expect = 8e-43
 Identities = 107/112 (95%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 749 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 808

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||| ||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 809 ccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagc 860

---

>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) gene, complete sequence; and putative site-specific
            DNA endonuclease (orf167) gene, complete cds; chloroplast
            genes for chloroplast products
          Length = 5476

 Score =  182 bits (92), Expect = 8e-43
 Identities = 107/112 (95%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2487 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2546

                                                                
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
            ||| |||||| ||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 2547 ccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagc 2598

---

>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene,
           partial sequence
          Length = 2446

 Score =  178 bits (90), Expect = 1e-41
 Identities = 171/197 (86%), Gaps = 5/197 (2%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 357 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 416

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag--ntga 481
           ||| |||||||  ||||||||||||||||||||||||| ||| ||||||||| |   |||
Sbjct: 417 ccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatga 476

                                                                       
Query: 482 ctggacatctagggg-taaagcactgtttcngngcgggctgcncgagcggnaccaaancn 540
            |  | |||| |||| |||||||||||||| | ||||||||   || ||| |||||| | 
Sbjct: 477 tt--atatctggggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcg 534

                            
Query: 541 aggcaaactctgaatac 557
           || ||||||||||||||
Sbjct: 535 agacaaactctgaatac 551



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 8    acctgtgtcggtttcgggtacaggta 33
            ||||||||||||||||||||||||||
Sbjct: 1239 acctgtgtcggtttcgggtacaggta 1214

---

>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene,
           partial sequence; chloroplast gene for chloroplast
           product
          Length = 2622

 Score =  176 bits (89), Expect = 5e-41
 Identities = 142/160 (88%), Gaps = 3/160 (1%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||
Sbjct: 716 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatg 775

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagnt---g 480
           ||| |||||| | ||||||||||||||||||||||||||||||||||||||| | |   |
Sbjct: 776 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttggcg 835

                                                   
Query: 481 actggacatctaggggtaaagcactgtttcngngcgggct 520
           || ||   |||||||||||||||||||||| | |||||||
Sbjct: 836 acgggctgtctaggggtaaagcactgtttcggtgcgggct 875

---

>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 2704

 Score =  176 bits (89), Expect = 5e-41
 Identities = 152/174 (87%), Gaps = 3/174 (1%)
 Strand = Plus / Plus

                                                                       
Query: 367 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 426
           |||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||||||||
Sbjct: 753 gtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatgcca 812

                                                                       
Query: 427 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag---ntgact 483
            |||||| | ||||||||||||||||||||||||||||||||||||||| |    |||  
Sbjct: 813 atcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaatgatg 872

                                                                 
Query: 484 ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaa 537
           ||   |||||||||||||||||||||| | |||||||||  |||||| ||||||
Sbjct: 873 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaa 926



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 8    acctgtgtcggtttcgggtacaggta 33
            ||||||||||||||||||||||||||
Sbjct: 1719 acctgtgtcggtttcgggtacaggta 1694

---

>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial
           sequence
          Length = 2444

 Score =  174 bits (88), Expect = 2e-40
 Identities = 106/112 (94%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 357 gaggtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatg 416

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 417 ccaatcgaaccgggagctagctggttctccccgaaatgtgttgaggcgcagc 468



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 493 ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
           |||||||||||||| ||| | ||||||||   || ||| |||||| | || |||||||||
Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546

                
Query: 553 aatac 557
           |||||
Sbjct: 547 aatac 551



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 8    acctgtgtcggtttcgggtacaggta 33
            ||||||||||||||||||||| ||||
Sbjct: 1240 acctgtgtcggtttcgggtacgggta 1215

---

>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence
          Length = 2435

 Score =  174 bits (88), Expect = 2e-40
 Identities = 106/112 (94%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||
Sbjct: 358 gaggtccgaaccgaccgatgttgaaaaatcggcggatgaggtgtggttaggggtgaaatg 417

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagc 469



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 493 ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
           |||||||||||||||||| | |||||||||  |||||| |||||| | || |||||||||
Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547

                
Query: 553 aatac 557
           |||||
Sbjct: 548 aatac 552



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 8    acctgtgtcggtttcgggtacagg 31
            ||||||||||||||||||||||||
Sbjct: 1235 acctgtgtcggtttcgggtacagg 1212

---

>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence
          Length = 2441

 Score =  174 bits (88), Expect = 2e-40
 Identities = 106/112 (94%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 357 gaggtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatg 416

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 417 ccaatcgaaccgggagctagctggttctccccgaaatgtgttgaggcgcagc 468



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 493 ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
           |||||||||||||| ||| | ||||||||   || ||| |||||| | || |||||||||
Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546

                
Query: 553 aatac 557
           |||||
Sbjct: 547 aatac 551



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 8    acctgtgtcggtttcgggtacaggta 33
            ||||||||||||||||||||| ||||
Sbjct: 1238 acctgtgtcggtttcgggtacgggta 1213

---

>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial
           sequence
          Length = 2440

 Score =  174 bits (88), Expect = 2e-40
 Identities = 106/112 (94%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 358 gaggtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatg 417

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||||| ||||||||||||||||||||||||| |||||||| ||||
Sbjct: 418 ccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcacagc 469



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 493 ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
           |||||||||||||||||| | |||||||||  |||||| |||||| | || |||||||||
Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547

                
Query: 553 aatac 557
           |||||
Sbjct: 548 aatac 552



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 8    acctgtgtcggtttcgggtacagg 31
            ||||||||||||||||||||||||
Sbjct: 1239 acctgtgtcggtttcgggtacagg 1216

---

>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene,
           partial sequence
          Length = 2364

 Score =  174 bits (88), Expect = 2e-40
 Identities = 106/112 (94%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 357 gaggtccgaaccgactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatg 416

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 417 ccaatcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagc 468



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 493 ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
           |||||||||||||||||| | |||||||||  |||||| |||||| | || ||||||| |
Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcag 546

                
Query: 553 aatac 557
           |||||
Sbjct: 547 aatac 551

---

>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7
          Length = 348071

 Score =  174 bits (88), Expect = 2e-40
 Identities = 103/108 (95%)
 Strand = Plus / Minus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 5868 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 5809

                                                            
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
            ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 5808 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 5761



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 8    acctgtgtcggtttcgggtac 28
            |||||||||||||||||||||
Sbjct: 4987 acctgtgtcggtttcgggtac 5007

---

>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7
          Length = 349391

 Score =  174 bits (88), Expect = 2e-40
 Identities = 103/108 (95%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 211904 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 211963

                                                              
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
              ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 211964 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 212011



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 8      acctgtgtcggtttcgggtac 28
              |||||||||||||||||||||
Sbjct: 212785 acctgtgtcggtttcgggtac 212765

---

>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial
           sequence
          Length = 806

 Score =  174 bits (88), Expect = 2e-40
 Identities = 103/108 (95%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 591 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 650

                                                           
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
           ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 651 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 698

---

>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial
           sequence
          Length = 2389

 Score =  170 bits (86), Expect = 3e-39
 Identities = 170/197 (86%), Gaps = 5/197 (2%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 357 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 416

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcag--ntga 481
           ||| |||||||  ||||||||||||||||||||||||| ||| ||||||||| |   |||
Sbjct: 417 ccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatga 476

                                                                       
Query: 482 ctggacatctagggg-taaagcactgtttcngngcgggctgcncgagcggnaccaaancn 540
            |  | |||| |||| |||||||||||||| | ||||||||   || ||| |||||| | 
Sbjct: 477 tt--atatctggggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcg 534

                            
Query: 541 aggcaaactctgaatac 557
           || ||||||||||||||
Sbjct: 535 agacaaactctgaatac 551



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 8    acctgtgtcggtttcgggtacaggta 33
            ||||||||||||||||||||| ||||
Sbjct: 1184 acctgtgtcggtttcgggtacgggta 1159

---

>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 2552

 Score =  170 bits (86), Expect = 3e-39
 Identities = 165/193 (85%), Gaps = 3/193 (1%)
 Strand = Plus / Plus

                                                                       
Query: 369 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 428
           ||||||| |||||||||||| |||||| ||||||||||||||||| |||||||||||| |
Sbjct: 724 ccgaacccactgatgttgaaaaatcaggggatgagttgtggttagcggtgaaatgccaat 783

                                                                       
Query: 429 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc---agntgactgg 485
           ||||| ||||||||||||| |||||||||||||||||||||||||||    | |||  ||
Sbjct: 784 cgaactcagagctagctggatctccccgaaatgcgttgaggcgcagcggttgttgatggg 843

                                                                       
Query: 486 acatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggca 545
            | || ||||||||||||||||||| | |||||||||   ||||| |||||| |  ||||
Sbjct: 844 tcgtcaaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 903

                        
Query: 546 aactctgaatact 558
           ||||  |||||||
Sbjct: 904 aactaagaatact 916

---

>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial
           sequence
          Length = 2451

 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||
Sbjct: 360 gaggtccgaaccgaccgatgttgaaaaatcggcggatgaggtgtggttaggggtgaaatg 419

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 420 ccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagc 471



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 56/65 (86%)
 Strand = Plus / Plus

                                                                       
Query: 493 ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
           |||||||||||||||||| | |||||||||   ||||| |||||| | || |||||||||
Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549

                
Query: 553 aatac 557
           |||||
Sbjct: 550 aatac 554



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 5    cccacctgtgtcggtttcgggtacagg 31
            |||||||||||||||||||||||||||
Sbjct: 1248 cccacctgtgtcggtttcgggtacagg 1222

---

>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene,
           partial sequence
          Length = 2387

 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 357 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 416

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||||  ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 417 ccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcgcagc 468



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 493 ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
           |||||||||||||||||| | ||||||||   || ||| |||||| | || ||||||| |
Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546

                
Query: 553 aatac 557
           |||||
Sbjct: 547 aatac 551



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 8    acctgtgtcggtttcgggtacaggta 33
            ||||||||||||||||||||| ||||
Sbjct: 1182 acctgtgtcggtttcgggtacgggta 1157

---

>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene,
           partial sequence
          Length = 2390

 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 357 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 416

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 417 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 468



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 493 ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
           |||||||||||||||||| | ||||||||   || ||| |||||| | || ||||||| |
Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546

                
Query: 553 aatac 557
           |||||
Sbjct: 547 aatac 551



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 8    acctgtgtcggtttcgggtacaggtac 34
            ||||||||||||||||||||| |||||
Sbjct: 1182 acctgtgtcggtttcgggtacgggtac 1156

---

>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial
           sequence
          Length = 2385

 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 357 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 416

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 417 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 468



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                       
Query: 492 aggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactct 551
           ||||||||||||||||||| | ||||||||   || ||| |||||| | || ||||||| 
Sbjct: 486 aggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545

                  
Query: 552 gaatact 558
           |||||||
Sbjct: 546 gaatact 552



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 8    acctgtgtcggtttcgggtacaggta 33
            ||||||||||||||||||||| ||||
Sbjct: 1181 acctgtgtcggtttcgggtacgggta 1156

---

>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene,
           partial sequence
          Length = 2389

 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 357 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 416

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 417 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 468



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 493 ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
           |||||||||||||||||| | ||||||||   || ||| |||||| | || ||||||| |
Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546

                
Query: 553 aatac 557
           |||||
Sbjct: 547 aatac 551



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 8    acctgtgtcggtttcgggtacaggtac 34
            ||||||||||||||||||||| |||||
Sbjct: 1182 acctgtgtcggtttcgggtacgggtac 1156

---

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Minus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 5434627 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 5434568

                                                                   
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
               ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 5434567 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 5434516



 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 3896811 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 3896870

                                                                   
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
               ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 3896871 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 3896922



 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Minus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 2807348 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 2807289

                                                                   
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
               ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 2807288 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2807237



 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 1005654 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 1005713

                                                                   
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
               ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 1005714 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 1005765



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 493     ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
               |||||||||||||||||| | ||||||||   || ||| |||||| | || ||||||| |
Sbjct: 5434497 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5434438

                    
Query: 553     aatac 557
               |||||
Sbjct: 5434437 aatac 5434433



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                           
Query: 493     ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
               |||||||||||||||||| | ||||||||   || ||| |||||| | || ||||||| |
Sbjct: 3896941 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 3897000

                    
Query: 553     aatac 557
               |||||
Sbjct: 3897001 aatac 3897005



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 493     ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
               |||||||||||||||||| | ||||||||   || ||| |||||| | || ||||||| |
Sbjct: 2807218 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2807159

                    
Query: 553     aatac 557
               |||||
Sbjct: 2807158 aatac 2807154



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                           
Query: 493     ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
               |||||||||||||||||| | ||||||||   || ||| |||||| | || ||||||| |
Sbjct: 1005784 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 1005843

                    
Query: 553     aatac 557
               |||||
Sbjct: 1005844 aatac 1005848



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 8       acctgtgtcggtttcgggtacaggtac 34
               ||||||||||||||||||||| |||||
Sbjct: 5433801 acctgtgtcggtttcgggtacgggtac 5433827



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 8       acctgtgtcggtttcgggtacaggtac 34
               ||||||||||||||||||||| |||||
Sbjct: 3897637 acctgtgtcggtttcgggtacgggtac 3897611



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 8       acctgtgtcggtttcgggtacaggtac 34
               ||||||||||||||||||||| |||||
Sbjct: 2806522 acctgtgtcggtttcgggtacgggtac 2806548



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 8       acctgtgtcggtttcgggtacaggtac 34
               ||||||||||||||||||||| |||||
Sbjct: 1006480 acctgtgtcggtttcgggtacgggtac 1006454

---

>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S
            ribosomal RNA, and 5S ribosomal RNA genes, complete
            sequence; chloroplast
          Length = 5026

 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538

                                                                
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
            ||| |||||  | ||||||||||||||||||||||||||||| |||||||||
Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590

---

>gb|AC151709.9| Medicago truncatula clone mth2-31g22, complete sequence
          Length = 116699

 Score =  167 bits (84), Expect = 5e-38
 Identities = 136/152 (89%), Gaps = 1/152 (0%)
 Strand = Plus / Plus

                                                                         
Query: 152   tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 211
             ||||||||||| | ||||| | ||||||| |||| |||| ||| ||||||||||||||||
Sbjct: 77396 tacttcagcgccggagcgcctcgtactcgaaccttggctggagccattttctctacccct 77455

                                                                         
Query: 212   tcttaccctgaaaaagcagggt-caccttgtgtccttaaacctataaccatctttcggct 270
             ||||||||||||||| |||||  |||||||||| ||| |||| |||||||||||||||||
Sbjct: 77456 tcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatctttcggct 77515

                                             
Query: 271   aacctagcctcctccgtccctccgtaccaaca 302
             |||||||||||||||||||||| | |||||||
Sbjct: 77516 aacctagcctcctccgtccctcgggaccaaca 77547



 Score =  139 bits (70), Expect = 1e-29
 Identities = 76/78 (97%)
 Strand = Plus / Plus

                                                                         
Query: 2     ctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttt 61
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 77315 ctacccacctgtgtcggtttcgggtacaggtacccttttgtttaaggtcgttcgagcttt 77374

                               
Query: 62    tcctgggagtatggcatc 79
             || |||||||||||||||
Sbjct: 77375 tcttgggagtatggcatc 77392

---

>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Minus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               |||| ||||||||  |||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 2051113 gagggccgaaccgggtgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatg 2051054

                                                                   
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
               ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2051053 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 2051002



 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               |||| ||||||||  |||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 1450388 gagggccgaaccgggtgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatg 1450447

                                                                   
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
               ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1450448 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 1450499



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                        
Query: 4       acccacctgtgtcggtttcgggtac 28
               |||||||||||||||||||||||||
Sbjct: 2050301 acccacctgtgtcggtttcgggtac 2050325



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                        
Query: 4       acccacctgtgtcggtttcgggtac 28
               |||||||||||||||||||||||||
Sbjct: 1451200 acccacctgtgtcggtttcgggtac 1451176

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               |||| ||||||||  |||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 2313039 gagggccgaaccggttgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatg 2313098

                                                                   
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
               ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2313099 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 2313150



 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Minus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               |||| ||||||||  |||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 1108808 gagggccgaaccggttgatgttgaaaaatcatcggatgagctgtggttaggggtgaaatg 1108749

                                                                   
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
               ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1108748 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 1108697



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                        
Query: 4       acccacctgtgtcggtttcgggtac 28
               |||||||||||||||||||||||||
Sbjct: 2313851 acccacctgtgtcggtttcgggtac 2313827



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                        
Query: 4       acccacctgtgtcggtttcgggtac 28
               |||||||||||||||||||||||||
Sbjct: 1107996 acccacctgtgtcggtttcgggtac 1108020

---

>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete
           sequence; chloroplast gene for chloroplast product
          Length = 2568

 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||| ||||||||| |||| || ||||||||||||||||||||||||||
Sbjct: 731 gaggtccgaaccgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatg 790

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 842



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                       
Query: 488 atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaa 547
           |||||||||||||||||||| || | |||||||||   ||||| |||||| |    ||||
Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918

                           
Query: 548 ctctgaatactanata 563
           |||||||||||| |||
Sbjct: 919 ctctgaatactagata 934



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 266  cggctaacctagcctcctccgtccctc 292
            |||||||||||||||||| ||||||||
Sbjct: 1455 cggctaacctagcctccttcgtccctc 1429



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 5    cccacctgtgtcggtttcgggtacaggt 32
            |||||||||||||||||  |||||||||
Sbjct: 1597 cccacctgtgtcggtttatggtacaggt 1570

---

>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial
           sequence; chloroplast gene for chloroplast product
          Length = 2632

 Score =  167 bits (84), Expect = 5e-38
 Identities = 169/199 (84%), Gaps = 3/199 (1%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| 
Sbjct: 739 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaata 798

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc---agntg 480
           ||| |||||| | |||||||||||||||||||||||||||||||||||||||   |  ||
Sbjct: 799 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtaaatg 858

                                                                       
Query: 481 actggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancn 540
           |  ||   |||||||||||||| ||||||| | |||||||||   ||||| |||||| | 
Sbjct: 859 atgggctgtctaggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcg 918

                              
Query: 541 aggcaaactctgaatacta 559
            ||||||||  ||||||||
Sbjct: 919 tggcaaactaagaatacta 937



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 8    acctgtgtcggtttcgggtacaggt 32
            |||||||||||||| ||||||||||
Sbjct: 1661 acctgtgtcggtttggggtacaggt 1637

---

>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; and large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; chloroplast genes for chloroplast products
          Length = 5057

 Score =  167 bits (84), Expect = 5e-38
 Identities = 169/199 (84%), Gaps = 3/199 (1%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| 
Sbjct: 2621 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaata 2680

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc---agntg 480
            ||| |||||| | |||||||||||||||||||||||||||||||||||||||   |  ||
Sbjct: 2681 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtaaatg 2740

                                                                        
Query: 481  actggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancn 540
            |  ||   |||||||||||||| ||||||| | |||||||||   ||||| |||||| | 
Sbjct: 2741 atgggctgtctaggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcg 2800

                               
Query: 541  aggcaaactctgaatacta 559
             ||||||||  ||||||||
Sbjct: 2801 tggcaaactaagaatacta 2819



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 8    acctgtgtcggtttcgggtacaggt 32
            |||||||||||||| ||||||||||
Sbjct: 3542 acctgtgtcggtttggggtacaggt 3518

---

>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene,
           complete sequence; chloroplast gene for chloroplast
           product
          Length = 2840

 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           |||| |||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagc 847



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                       
Query: 488 atctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaa 547
           ||||||||||||||||||||||| | |||||||||  |||||| |||||| | || ||||
Sbjct: 863 atctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaa 922

                       
Query: 548 ctctgaatacta 559
           ||||||||||||
Sbjct: 923 ctctgaatacta 934



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 310  gtacaggaatattgacctgttgtcca 335
            |||||||||| |||||||||||||||
Sbjct: 1412 gtacaggaattttgacctgttgtcca 1387

---

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Minus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 5944667 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 5944608

                                                                   
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
               ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 5944607 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 5944556



 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Minus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 4917023 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 4916964

                                                                   
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
               ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 4916963 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 4916912



 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 2503273 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 2503332

                                                                   
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
               ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 2503333 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2503384



 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 2378482 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 2378541

                                                                   
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
               ||| |||||||  ||||||||||||||||||||||||| |||||||||||||
Sbjct: 2378542 ccaatcgaaccaggagctagctggttctccccgaaatgtgttgaggcgcagc 2378593



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 493     ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
               |||||||||||||||||| | ||||||||   || ||| |||||| | || ||||||| |
Sbjct: 5944537 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5944478

                    
Query: 553     aatac 557
               |||||
Sbjct: 5944477 aatac 5944473



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 493     ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
               |||||||||||||||||| | ||||||||   || ||| |||||| | || ||||||| |
Sbjct: 4916893 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 4916834

                    
Query: 553     aatac 557
               |||||
Sbjct: 4916833 aatac 4916829



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                           
Query: 493     ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
               |||||||||||||||||| | ||||||||   || ||| |||||| | || ||||||| |
Sbjct: 2503403 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2503462

                    
Query: 553     aatac 557
               |||||
Sbjct: 2503463 aatac 2503467



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                           
Query: 493     ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
               |||||||||||||||||| | ||||||||   || ||| |||||| | || ||||||| |
Sbjct: 2378612 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2378671

                    
Query: 553     aatac 557
               |||||
Sbjct: 2378672 aatac 2378676



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 8       acctgtgtcggtttcgggtacaggtacc 35
               ||||||||||||||||||||| ||||||
Sbjct: 5943844 acctgtgtcggtttcgggtacgggtacc 5943871



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 8       acctgtgtcggtttcgggtacaggtacc 35
               ||||||||||||||||||||| ||||||
Sbjct: 4916200 acctgtgtcggtttcgggtacgggtacc 4916227



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 8       acctgtgtcggtttcgggtacaggtacc 35
               ||||||||||||||||||||| ||||||
Sbjct: 2504096 acctgtgtcggtttcgggtacgggtacc 2504069



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 8       acctgtgtcggtttcgggtacaggtacc 35
               ||||||||||||||||||||| ||||||
Sbjct: 2380776 acctgtgtcggtttcgggtacgggtacc 2380749

---

>gb|AF041468.1| Guillardia theta complete plastid genome
          Length = 121524

 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Minus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 39690 gaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 39631

                                                                 
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
             ||| ||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 39630 ccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcgcagc 39579



 Score =  167 bits (84), Expect = 5e-38
 Identities = 105/112 (93%)
 Strand = Plus / Plus

                                                                         
Query: 364   gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
             ||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 19710 gaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 19769

                                                                 
Query: 424   ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
             ||| ||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 19770 ccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcgcagc 19821



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/69 (85%)
 Strand = Plus / Minus

                                                                         
Query: 491   taggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactc 550
             |||||||||||||||||||| | |||||||||    |||| |||||| | | ||||||||
Sbjct: 39562 taggggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactc 39503

                      
Query: 551   tgaatacta 559
             |||||||||
Sbjct: 39502 tgaatacta 39494



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                         
Query: 491   taggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactc 550
             |||||||||||||||||||| | |||||||||    |||| |||||| | | ||||||||
Sbjct: 19838 taggggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactc 19897

                      
Query: 551   tgaatacta 559
             |||||||||
Sbjct: 19898 tgaatacta 19906



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 3     tacccacctgtgtcggtttcgggtacaggta 33
             |||||||||||||||||||  ||||||||||
Sbjct: 38809 tacccacctgtgtcggtttgtggtacaggta 38839



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 3     tacccacctgtgtcggtttcgggtacaggta 33
             |||||||||||||||||||  ||||||||||
Sbjct: 20591 tacccacctgtgtcggtttgtggtacaggta 20561

---

>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score =  167 bits (84), Expect = 5e-38
 Identities = 102/108 (94%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 356207 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 356266

                                                              
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
              ||| |||||||  |||||||||||||||||||||||| ||||||||||
Sbjct: 356267 ccaatcgaaccaggagctagctggttctccccgaaatacgttgaggcg 356314



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                         
Query: 5      cccacctgtgtcggtttcgggtacagg 31
              |||||||||||||||||||||||||||
Sbjct: 357089 cccacctgtgtcggtttcgggtacagg 357063

---

>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1,
            strain M 0880
          Length = 4934

 Score =  167 bits (84), Expect = 5e-38
 Identities = 102/108 (94%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 2949 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 3008

                                                            
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
            ||| |||||||| |||||||||||||||||||||||| |||| |||||
Sbjct: 3009 ccaatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 56/66 (84%), Gaps = 1/66 (1%)
 Strand = Plus / Plus

                                                                        
Query: 493  ggggtaaagc-actgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactct 551
            |||||||||| |||||||| |  ||||||||  |||||| |||||| | || ||||||||
Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138

                  
Query: 552  gaatac 557
            ||||||
Sbjct: 3139 gaatac 3144



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 5    cccacctgtgtcggtttcgggtac 28
            ||||||||||||||||||||||||
Sbjct: 3828 cccacctgtgtcggtttcgggtac 3805

---

>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1,
            strain SAG 36.94
          Length = 4420

 Score =  161 bits (81), Expect = 3e-36
 Identities = 165/196 (84%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            ||||||||||||||||||||||||| ||||| |||||||| ||||| ||| |||||||| 
Sbjct: 2430 gaggtccgaaccgactgatgttgaaaaatcaacggatgagctgtggctagcggtgaaata 2489

                                                                        
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagntgact 483
            ||| |||||  | ||||||||||||||||||||||||||||||||||||||| | |||  
Sbjct: 2490 ccaatcgaattcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgaaa 2549

                                                                        
Query: 484  ggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnagg 543
              | |  |||||||||||||||||||| | |||||||||   || || |||||| | | |
Sbjct: 2550 ttaaacttaggggtaaagcactgtttcggtgcgggctgcgaaagyggtaccaaatcgatg 2609

                            
Query: 544  caaactctgaatacta 559
            ||||||  ||||||||
Sbjct: 2610 caaactaagaatacta 2625



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 308  tagtacaggaatattgacctgttgtcca 335
            ||||||||||||||| ||||||||||||
Sbjct: 3096 tagtacaggaatattaacctgttgtcca 3069



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 3    tacccacctgtgtcggtttcgggtacaggta 33
            |||| |||||||||||||| |||||||||||
Sbjct: 3312 tacctacctgtgtcggtttagggtacaggta 3282

---

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Minus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               |||||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||
Sbjct: 2138052 gaggtccgaaccgactgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatg 2137993

                                                               
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
               ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 2137992 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 2137945



 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              |||||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||
Sbjct: 476808 gaggtccgaaccgactgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatg 476867

                                                              
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
              ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 476868 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 476915



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 5       cccacctgtgtcggtttcgggtac 28
               ||||||||||||||||||||||||
Sbjct: 2137176 cccacctgtgtcggtttcgggtac 2137199



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 5      cccacctgtgtcggtttcgggtac 28
              ||||||||||||||||||||||||
Sbjct: 477684 cccacctgtgtcggtttcgggtac 477661

---

>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence;
            internal transcribed spacer 1, complete sequence;
            tRNA-Ile gene, complete sequence; and 23S ribosomal RNA
            gene, partial sequence
          Length = 3320

 Score =  159 bits (80), Expect = 1e-35
 Identities = 104/112 (92%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            |||||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 2272 gaggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatg 2331

                                                                
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
            ||| |||||| | ||||||||||||||||||||||||| |||||||||||||
Sbjct: 2332 ccaatcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagc 2383



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 5    cccacctgtgtcggtttcgggtacagg 31
            |||||||||||||||||||||||||||
Sbjct: 3153 cccacctgtgtcggtttcgggtacagg 3127



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 53/65 (81%)
 Strand = Plus / Plus

                                                                        
Query: 493  ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
            ||||||||||||||||||   ||||||||   || ||| ||||   | ||||||||||||
Sbjct: 2402 ggggtaaagcactgtttcgccgcgggctgggagaccggtaccagggcgaggcaaactctg 2461

                 
Query: 553  aatac 557
            |||||
Sbjct: 2462 aatac 2466

---

>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence;
            tRNA-Ile gene and 16S-23S ribosomal RNA intergenic
            spacer, complete sequences; and 23S ribosomal RNA gene,
            partial sequence
          Length = 3321

 Score =  159 bits (80), Expect = 1e-35
 Identities = 104/112 (92%)
 Strand = Plus / Plus

                                                                        
Query: 364  gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
            |||||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 2273 gaggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatg 2332

                                                                
Query: 424  ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
            ||| |||||| | ||||||||||||||||||||||||| |||||||||||||
Sbjct: 2333 ccaatcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagc 2384



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 5    cccacctgtgtcggtttcgggtacagg 31
            |||||||||||||||||||||||||||
Sbjct: 3154 cccacctgtgtcggtttcgggtacagg 3128



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                        
Query: 493  ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
            ||||||||||||||||||   ||||||||   || ||| |||||  | ||||||||||||
Sbjct: 2403 ggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctg 2462

                 
Query: 553  aatac 557
            |||||
Sbjct: 2463 aatac 2467

---

>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial
           sequence
          Length = 2435

 Score =  159 bits (80), Expect = 1e-35
 Identities = 104/112 (92%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           |||||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 357 gaggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatg 416

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||| | ||||||||||||||||||||||||| |||||||||||||
Sbjct: 417 ccaatcgaactcggagctagctggttctccccgaaatgtgttgaggcgcagc 468



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                       
Query: 5    cccacctgtgtcggtttcgggtacagg 31
            |||||||||||||||||||||||||||
Sbjct: 1237 cccacctgtgtcggtttcgggtacagg 1211



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 493 ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
           ||||||||||||||||||   ||||||||   || ||| |||||  | ||||||||||||
Sbjct: 487 ggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctg 546

                
Query: 553 aatac 557
           |||||
Sbjct: 547 aatac 551

---

>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene,
           partial sequence
          Length = 2340

 Score =  159 bits (80), Expect = 1e-35
 Identities = 104/112 (92%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct: 355 gaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatg 414

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||||  ||||||||||||||||||||||||| ||| |||| ||||
Sbjct: 415 ccaatcgaaccaggagctagctggttctccccgaaatgtgtttaggcacagc 466



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 5    cccacctgtgtcggtttcgggtac 28
            ||||||||||||||||||||||||
Sbjct: 1167 cccacctgtgtcggtttcgggtac 1144

---

>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence
          Length = 2441

 Score =  159 bits (80), Expect = 1e-35
 Identities = 104/112 (92%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           |||||||||||||||| |||||||| ||| |||||||||| |||||||||||||||||||
Sbjct: 358 gaggtccgaaccgactaatgttgaaaaattagcggatgagctgtggttaggggtgaaatg 417

                                                               
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 475
           ||| |||||||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct: 418 ccaatcgaacccggagctagctggttctccccgaaatgtgtttaggcgcagc 469



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 8    acctgtgtcggtttcgggtacaggt 32
            |||||||||||||||||||||||||
Sbjct: 1237 acctgtgtcggtttcgggtacaggt 1213



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 53/65 (81%)
 Strand = Plus / Plus

                                                                       
Query: 493 ggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancnaggcaaactctg 552
           ||||||||||||||||||   |||||| ||  |||| | ||||||   |||||||||| |
Sbjct: 489 ggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcag 548

                
Query: 553 aatac 557
           |||||
Sbjct: 549 aatac 553

---

>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7
          Length = 349122

 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              |||||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||
Sbjct: 339303 gaggtccgaaccgactgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatg 339244

                                                              
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
              ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 339243 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 339196



 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Minus

                                                                          
Query: 364    gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
              |||||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||
Sbjct: 132363 gaggtccgaaccgactgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatg 132304

                                                              
Query: 424    ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
              ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 132303 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 132256



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 5      cccacctgtgtcggtttcgggtac 28
              ||||||||||||||||||||||||
Sbjct: 338429 cccacctgtgtcggtttcgggtac 338452



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 5      cccacctgtgtcggtttcgggtac 28
              ||||||||||||||||||||||||
Sbjct: 131489 cccacctgtgtcggtttcgggtac 131512

---

>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA
           (rrnL) gene
          Length = 3875

 Score =  159 bits (80), Expect = 1e-35
 Identities = 168/199 (84%), Gaps = 3/199 (1%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           |||| |||||||||| ||||||||| |||| |||||||||||||||||||||||||||| 
Sbjct: 754 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaata 813

                                                                       
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagn---tg 480
           ||| |||||| | ||||||||||||||||||||||||||||||||||||||| |    ||
Sbjct: 814 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggcgaatg 873

                                                                       
Query: 481 actggacatctaggggtaaagcactgtttcngngcgggctgcncgagcggnaccaaancn 540
           |  ||   |||||||||||||| |||||||   |||||||||   ||||| |||||| | 
Sbjct: 874 atgggctgtctaggggtaaagctctgtttcgatgcgggctgcgaaagcggtaccaaatcg 933

                              
Query: 541 aggcaaactctgaatacta 559
            ||||||||  ||||||||
Sbjct: 934 tggcaaactaagaatacta 952



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 4    acccacctgtgtcggtttcgggtacaggt 32
            |||||||||||||||||| ||||||||||
Sbjct: 1675 acccacctgtgtcggtttggggtacaggt 1647

---

>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               ||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||
Sbjct: 1659234 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatg 1659293

                                                               
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
               ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 1659294 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 1659341



 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Minus

                                                                           
Query: 364     gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
               ||||||||||||||| ||||||||| |||| ||||||||| |||||||||||||||||||
Sbjct: 1049510 gaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaatg 1049451

                                                               
Query: 424     ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
               ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 1049450 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 1049403



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 5       cccacctgtgtcggtttcgggtacagg 31
               ||||||||||||||||| |||||||||
Sbjct: 1660117 cccacctgtgtcggtttagggtacagg 1660091



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 5       cccacctgtgtcggtttcgggtacagg 31
               ||||||||||||||||| |||||||||
Sbjct: 1048627 cccacctgtgtcggtttagggtacagg 1048653



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 310     gtacaggaatattgacctgttgtcca 335
               ||||||||||||| ||||||||||||
Sbjct: 1659901 gtacaggaatattaacctgttgtcca 1659876



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 310     gtacaggaatattgacctgttgtcca 335
               ||||||||||||| ||||||||||||
Sbjct: 1048843 gtacaggaatattaacctgttgtcca 1048868

---

>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial
           sequence
          Length = 793

 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||
Sbjct: 578 gaggtccgaacggactgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatg 637

                                                           
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
           ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 638 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 685

---

>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial
           sequence
          Length = 793

 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||
Sbjct: 578 gaggtccgaacggactgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatg 637

                                                           
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
           ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 638 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 685

---

>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial
           sequence
          Length = 723

 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           |||||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||
Sbjct: 591 gaggtccgaaccgactgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatg 650

                                                           
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
           ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 651 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 698

---

>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial
           sequence
          Length = 723

 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           |||||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||
Sbjct: 591 gaggtccgaaccgactgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatg 650

                                                           
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
           ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 651 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 698

---

>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial
           sequence
          Length = 793

 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           ||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||
Sbjct: 578 gaggtccgaacggactgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatg 637

                                                           
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
           ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 638 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 685

---

>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial
           sequence
          Length = 806

 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                       
Query: 364 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 423
           |||||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||
Sbjct: 591 gaggtccgaaccgactgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatg 650

                                                           
Query: 424 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 471
           ||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 651 ccaatcgaacccggagctagctggttctccccgaaatacgttgaggcg 698


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,001,834
Number of Sequences: 3902068
Number of extensions: 3001834
Number of successful extensions: 64585
Number of sequences better than 10.0: 2563
Number of HSP's better than 10.0 without gapping: 2526
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 53131
Number of HSP's gapped (non-prelim): 11057
length of query: 571
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 548
effective length of database: 17,143,297,704
effective search space: 9394527141792
effective search space used: 9394527141792
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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