| Clone Name | baal40b18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096P07, full insert sequence Length = 1341 Score = 371 bits (187), Expect = 2e-99 Identities = 423/501 (84%), Gaps = 3/501 (0%) Strand = Plus / Plus Query: 149 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 208 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 123 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 182 Query: 209 cctcgtccccgacgcgcaaggggatctcgcggatgtcgttcttgggttcgacaccctgga 268 | ||||||||||||| || ||| ||||||||||||| |||||||| |||||||| ||||| Sbjct: 183 catcgtccccgacgcccacgggaatctcgcggatgtggttcttggattcgacactctgga 242 Query: 269 gccgtacttgaaaggcatggcaccttattttggttgcatagttggccgagttgcaaatag 328 ||| ||| |||||||||| ||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 243 gccttacatgaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaatag 302 Query: 329 gatcaaggatgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgg 388 ||||||||| || |||||| |||||| ||||| |||||||| || ||||||| ||||| Sbjct: 303 gatcaaggagggaaagtttactctgaatggagttgagtattcactagctatcaataatgg 362 Query: 389 gccgaacagccttcatggtggattgaaggggtttgacaaggttgtgtgggatgttgtaga 448 || ||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct: 363 acccaacagtcttcatggtgggttgaaggggtttgacaaagtagtgtgggatgtagtaga 422 Query: 449 gcgtaaagatggcgagtacccatcaataaccttccagtatgagagcaaagatggcgaaga 508 ||| ||| | || | ||||||||| |||||||| ||| | ||||| ||||| ||||| Sbjct: 423 gcgcaaa---agtgaatgcccatcaatcaccttccaatatcacagcaaggatggggaaga 479 Query: 509 aggttaccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactct 568 || |||||||||||||| || | |||||||| || ||||||||||| ||||||| | Sbjct: 480 gggctaccctggcgatgtgactgttcgagcaacatactctcttcctgattctaccacctt 539 Query: 569 aagacttgacatggaagctataccagctaacaaagccactcctatcagcttggcacagca 628 |||||||||||||||||| || ||| |||||||| || || |||| |||||| ||||| Sbjct: 540 aagacttgacatggaagcagtagcagagaacaaagcgacgcccatcaacttggcgcagca 599 Query: 629 tacttactggaaccttgcagg 649 || ||||||||||| ||||| Sbjct: 600 cacctactggaacctggcagg 620
>dbj|AK061152.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-F01, full insert sequence Length = 1857 Score = 371 bits (187), Expect = 2e-99 Identities = 423/501 (84%), Gaps = 3/501 (0%) Strand = Plus / Plus Query: 149 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 208 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 630 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 689 Query: 209 cctcgtccccgacgcgcaaggggatctcgcggatgtcgttcttgggttcgacaccctgga 268 | ||||||||||||| || ||| ||||||||||||| |||||||| |||||||| ||||| Sbjct: 690 catcgtccccgacgcccacgggaatctcgcggatgtggttcttggattcgacactctgga 749 Query: 269 gccgtacttgaaaggcatggcaccttattttggttgcatagttggccgagttgcaaatag 328 ||| ||| |||||||||| ||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 750 gccttacatgaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaatag 809 Query: 329 gatcaaggatgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgg 388 ||||||||| || |||||| |||||| ||||| |||||||| || ||||||| ||||| Sbjct: 810 gatcaaggagggaaagtttactctgaatggagttgagtattcactagctatcaataatgg 869 Query: 389 gccgaacagccttcatggtggattgaaggggtttgacaaggttgtgtgggatgttgtaga 448 || ||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct: 870 acccaacagtcttcatggtgggttgaaggggtttgacaaagtagtgtgggatgtagtaga 929 Query: 449 gcgtaaagatggcgagtacccatcaataaccttccagtatgagagcaaagatggcgaaga 508 ||| ||| | || | ||||||||| |||||||| ||| | ||||| ||||| ||||| Sbjct: 930 gcgcaaa---agtgaatgcccatcaatcaccttccaatatcacagcaaggatggggaaga 986 Query: 509 aggttaccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactct 568 || |||||||||||||| || | |||||||| || ||||||||||| ||||||| | Sbjct: 987 gggctaccctggcgatgtgactgttcgagcaacatactctcttcctgattctaccacctt 1046 Query: 569 aagacttgacatggaagctataccagctaacaaagccactcctatcagcttggcacagca 628 |||||||||||||||||| || ||| |||||||| || || |||| |||||| ||||| Sbjct: 1047 aagacttgacatggaagcagtagcagagaacaaagcgacgcccatcaacttggcgcagca 1106 Query: 629 tacttactggaaccttgcagg 649 || ||||||||||| ||||| Sbjct: 1107 cacctactggaacctggcagg 1127
>gb|AY110655.1| Zea mays CL9117_1 mRNA sequence Length = 1124 Score = 369 bits (186), Expect = 8e-99 Identities = 422/501 (84%) Strand = Plus / Minus Query: 149 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 208 ||||||||| |||| |||||| |||| ||| | |||||||||||||||||||||||||| Sbjct: 1109 gctctccaacggcaagatcaccgcgaggatctccaactggggcgccaccatcacctccct 1050 Query: 209 cctcgtccccgacgcgcaaggggatctcgcggatgtcgttcttgggttcgacaccctgga 268 || ||||||||||| || ||| | ||| |||| || ||||| ||||| | |||| Sbjct: 1049 tcttgtccccgacgcccaggggagtatcgttgatggggtgcttggattcgatggcttgga 990 Query: 269 gccgtacttgaaaggcatggcaccttattttggttgcatagttggccgagttgcaaatag 328 |||||| ||||||||||| ||||||||||||| |||||||||||||| || || ||||| Sbjct: 989 tccgtacgtgaaaggcatgtcaccttattttggctgcatagttggccgngtcgcgaatag 930 Query: 329 gatcaaggatgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgg 388 ||||||||||||||||||| || |||||| | |||||||| || |||||||||||||| Sbjct: 929 gatcaaggatgggaagtttacactaaacggacttgagtattcattgcctatcaacaatgg 870 Query: 389 gccgaacagccttcatggtggattgaaggggtttgacaaggttgtgtgggatgttgtaga 448 || ||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || || Sbjct: 869 acctaacagccttcatggtgggttgaagggatttgataaggtcgtgtgggatgtcgtgga 810 Query: 449 gcgtaaagatggcgagtacccatcaataaccttccagtatgagagcaaagatggcgaaga 508 || ||||||||||| | ||| |||||||| || ||||| | ||||| || || ||||| Sbjct: 809 gcacaaagatggcgaatgcccttcaataacttttcagtaccacagcaaggacggggaaga 750 Query: 509 aggttaccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactct 568 ||| || || |||||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 749 aggctatccaggcgatgtaaccattcgagcaacatactctcttcctgaagctactactct 690 Query: 569 aagacttgacatggaagctataccagctaacaaagccactcctatcagcttggcacagca 628 ||| |||||||||||||||| ||||| |||||||| |||||||| ||| |||| ||||| Sbjct: 689 aaggcttgacatggaagctacaccagagaacaaagcaactcctataagcctggcgcagca 630 Query: 629 tacttactggaaccttgcagg 649 || ||||||||||| ||||| Sbjct: 629 cacctactggaacctcgcagg 609
>ref|NM_194929.1| Oryza sativa (japonica cultivar-group) putative aldose 1-epimerase - like protein (OSJNAa0034B05.14), mRNA Length = 1032 Score = 250 bits (126), Expect = 5e-63 Identities = 311/372 (83%), Gaps = 3/372 (0%) Strand = Plus / Plus Query: 278 gaaaggcatggcaccttattttggttgcatagttggccgagttgcaaataggatcaagga 337 ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 183 gaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaataggatcaagga 242 Query: 338 tgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgggccgaacag 397 || |||||| |||||| ||||| |||||||| || ||||||| ||||| || ||||| Sbjct: 243 gggaaagtttactctgaatggagttgagtattcactagctatcaataatggacccaacag 302 Query: 398 ccttcatggtggattgaaggggtttgacaaggttgtgtgggatgttgtagagcgtaaaga 457 ||||||||||| ||||||||||||||||| || ||||||||||| |||||||| ||| Sbjct: 303 tcttcatggtgggttgaaggggtttgacaaagtagtgtgggatgtagtagagcgcaaa-- 360 Query: 458 tggcgagtacccatcaataaccttccagtatgagagcaaagatggcgaagaaggttaccc 517 | || | ||||||||| |||||||| ||| | ||||| ||||| ||||| || ||||| Sbjct: 361 -agtgaatgcccatcaatcaccttccaatatcacagcaaggatggggaagagggctaccc 419 Query: 518 tggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactctaagacttga 577 ||||||||| || | |||||||| || ||||||||||| ||||||| |||||||||| Sbjct: 420 tggcgatgtgactgttcgagcaacatactctcttcctgattctaccaccttaagacttga 479 Query: 578 catggaagctataccagctaacaaagccactcctatcagcttggcacagcatacttactg 637 ||||||||| || ||| |||||||| || || |||| |||||| ||||| || ||||| Sbjct: 480 catggaagcagtagcagagaacaaagcgacgcccatcaacttggcgcagcacacctactg 539 Query: 638 gaaccttgcagg 649 |||||| ||||| Sbjct: 540 gaacctggcagg 551 Score = 125 bits (63), Expect = 2e-25 Identities = 108/123 (87%) Strand = Plus / Plus Query: 149 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 208 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 24 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 83 Query: 209 cctcgtccccgacgcgcaaggggatctcgcggatgtcgttcttgggttcgacaccctgga 268 | ||||||||||||| || ||| ||||||||||||| |||||||| |||||||| ||||| Sbjct: 84 catcgtccccgacgcccacgggaatctcgcggatgtggttcttggattcgacactctgga 143 Query: 269 gcc 271 ||| Sbjct: 144 gcc 146
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 278 gaaaggcatggcaccttattttggttgcatagttggccgagttgcaaataggatcaagga 337 ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 47084 gaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaataggatcaagga 47025 Query: 338 tgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgggccgaacag 397 || |||||| |||||| ||||| |||||||| || ||||||| ||||| || ||||| Sbjct: 47024 gggaaagtttactctgaatggagttgagtattcactagctatcaataatggacccaacag 46965 Query: 398 ccttcatggt 407 ||||||||| Sbjct: 46964 tcttcatggt 46955 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Minus Query: 513 taccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactctaaga 572 |||||||||||||| || | |||||||| || ||||||||||| ||||||| ||||| Sbjct: 46592 taccctggcgatgtgactgttcgagcaacatactctcttcctgattctaccaccttaaga 46533 Query: 573 cttgacatggaagctataccagctaacaaagccactcctatcagcttggcacagcatact 632 |||||||||||||| || ||| |||||||| || || |||| |||||| ||||| || Sbjct: 46532 cttgacatggaagcagtagcagagaacaaagcgacgcccatcaacttggcgcagcacacc 46473 Query: 633 tactggaaccttgcagg 649 ||||||||||| ||||| Sbjct: 46472 tactggaacctggcagg 46456 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 149 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 208 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 48212 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 48153 Query: 209 cctcgtccccgacgc 223 | ||||||||||||| Sbjct: 48152 catcgtccccgacgc 48138 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 405 ggtggattgaaggggtttgacaaggttgtgtgggatgttgtagagcg 451 ||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 46793 ggtgggttgaaggggtttgacaaagtagtgtgggatgtagtagagcg 46747 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 227 aggggatctcgcggatgtcgttcttgggttcgacaccctggagcc 271 |||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 48008 agggaatctcgcggatgtggttcttggattcgacactctggagcc 47964
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05, complete sequence Length = 125655 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 278 gaaaggcatggcaccttattttggttgcatagttggccgagttgcaaataggatcaagga 337 ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 112739 gaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaataggatcaagga 112680 Query: 338 tgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgggccgaacag 397 || |||||| |||||| ||||| |||||||| || ||||||| ||||| || ||||| Sbjct: 112679 gggaaagtttactctgaatggagttgagtattcactagctatcaataatggacccaacag 112620 Query: 398 ccttcatggt 407 ||||||||| Sbjct: 112619 tcttcatggt 112610 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Minus Query: 513 taccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactctaaga 572 |||||||||||||| || | |||||||| || ||||||||||| ||||||| ||||| Sbjct: 112247 taccctggcgatgtgactgttcgagcaacatactctcttcctgattctaccaccttaaga 112188 Query: 573 cttgacatggaagctataccagctaacaaagccactcctatcagcttggcacagcatact 632 |||||||||||||| || ||| |||||||| || || |||| |||||| ||||| || Sbjct: 112187 cttgacatggaagcagtagcagagaacaaagcgacgcccatcaacttggcgcagcacacc 112128 Query: 633 tactggaaccttgcagg 649 ||||||||||| ||||| Sbjct: 112127 tactggaacctggcagg 112111 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 149 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 208 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 113867 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 113808 Query: 209 cctcgtccccgacgc 223 | ||||||||||||| Sbjct: 113807 catcgtccccgacgc 113793 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 405 ggtggattgaaggggtttgacaaggttgtgtgggatgttgtagagcg 451 ||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 112448 ggtgggttgaaggggtttgacaaagtagtgtgggatgtagtagagcg 112402 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 227 aggggatctcgcggatgtcgttcttgggttcgacaccctggagcc 271 |||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 113663 agggaatctcgcggatgtggttcttggattcgacactctggagcc 113619
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 278 gaaaggcatggcaccttattttggttgcatagttggccgagttgcaaataggatcaagga 337 ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 3455955 gaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaataggatcaagga 3455896 Query: 338 tgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgggccgaacag 397 || |||||| |||||| ||||| |||||||| || ||||||| ||||| || ||||| Sbjct: 3455895 gggaaagtttactctgaatggagttgagtattcactagctatcaataatggacccaacag 3455836 Query: 398 ccttcatggt 407 ||||||||| Sbjct: 3455835 tcttcatggt 3455826 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Minus Query: 513 taccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactctaaga 572 |||||||||||||| || | |||||||| || ||||||||||| ||||||| ||||| Sbjct: 3455463 taccctggcgatgtgactgttcgagcaacatactctcttcctgattctaccaccttaaga 3455404 Query: 573 cttgacatggaagctataccagctaacaaagccactcctatcagcttggcacagcatact 632 |||||||||||||| || ||| |||||||| || || |||| |||||| ||||| || Sbjct: 3455403 cttgacatggaagcagtagcagagaacaaagcgacgcccatcaacttggcgcagcacacc 3455344 Query: 633 tactggaaccttgcagg 649 ||||||||||| ||||| Sbjct: 3455343 tactggaacctggcagg 3455327 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 149 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 208 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 3457083 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 3457024 Query: 209 cctcgtccccgacgc 223 | ||||||||||||| Sbjct: 3457023 catcgtccccgacgc 3457009 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 405 ggtggattgaaggggtttgacaaggttgtgtgggatgttgtagagcg 451 ||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 3455664 ggtgggttgaaggggtttgacaaagtagtgtgggatgtagtagagcg 3455618 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 227 aggggatctcgcggatgtcgttcttgggttcgacaccctggagcc 271 |||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 3456879 agggaatctcgcggatgtggttcttggattcgacactctggagcc 3456835
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 278 gaaaggcatggcaccttattttggttgcatagttggccgagttgcaaataggatcaagga 337 ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 3455876 gaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaataggatcaagga 3455817 Query: 338 tgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgggccgaacag 397 || |||||| |||||| ||||| |||||||| || ||||||| ||||| || ||||| Sbjct: 3455816 gggaaagtttactctgaatggagttgagtattcactagctatcaataatggacccaacag 3455757 Query: 398 ccttcatggt 407 ||||||||| Sbjct: 3455756 tcttcatggt 3455747 Score = 89.7 bits (45), Expect = 1e-14 Identities = 114/137 (83%) Strand = Plus / Minus Query: 513 taccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactctaaga 572 |||||||||||||| || | |||||||| || ||||||||||| ||||||| ||||| Sbjct: 3455384 taccctggcgatgtgactgttcgagcaacatactctcttcctgattctaccaccttaaga 3455325 Query: 573 cttgacatggaagctataccagctaacaaagccactcctatcagcttggcacagcatact 632 |||||||||||||| || ||| |||||||| || || |||| |||||| ||||| || Sbjct: 3455324 cttgacatggaagcagtagcagagaacaaagcgacgcccatcaacttggcgcagcacacc 3455265 Query: 633 tactggaaccttgcagg 649 ||||||||||| ||||| Sbjct: 3455264 tactggaacctggcagg 3455248 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 149 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 208 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 3457004 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 3456945 Query: 209 cctcgtccccgacgc 223 | ||||||||||||| Sbjct: 3456944 catcgtccccgacgc 3456930 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 405 ggtggattgaaggggtttgacaaggttgtgtgggatgttgtagagcg 451 ||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 3455585 ggtgggttgaaggggtttgacaaagtagtgtgggatgtagtagagcg 3455539 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 227 aggggatctcgcggatgtcgttcttgggttcgacaccctggagcc 271 |||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 3456800 agggaatctcgcggatgtggttcttggattcgacactctggagcc 3456756
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 289 caccttattttggttgcatagttggccgagttgcaaataggatcaaggatgggaagttt 347 ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 767491 caccttattttggctgcattgttgggcgagttgcaaataggatcaaggatgggaagttt 767549
>dbj|AP005787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0501E09 Length = 150604 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 289 caccttattttggttgcatagttggccgagttgcaaataggatcaaggatgggaagttt 347 ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 52830 caccttattttggctgcattgttgggcgagttgcaaataggatcaaggatgggaagttt 52888
>dbj|AP005591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0584E12 Length = 159071 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 289 caccttattttggttgcatagttggccgagttgcaaataggatcaaggatgggaagttt 347 ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 140032 caccttattttggctgcattgttgggcgagttgcaaataggatcaaggatgggaagttt 140090
>dbj|AK063547.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-D04, full insert sequence Length = 1483 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 289 caccttattttggttgcatagttggccgagttgcaaataggatcaaggatgggaagttt 347 ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 622 caccttattttggctgcattgttgggcgagttgcaaataggatcaaggatgggaagttt 680
>ref|NM_112675.3| Arabidopsis thaliana aldose 1-epimerase AT3G17940 mRNA, complete cds Length = 1288 Score = 48.1 bits (24), Expect = 0.036 Identities = 60/72 (83%) Strand = Plus / Plus Query: 570 agacttgacatggaagctataccagctaacaaagccactcctatcagcttggcacagcat 629 |||||||||||||||||| | |||| ||||||| ||||| |||| ||| || || ||| Sbjct: 537 agacttgacatggaagctgttccagagaacaaagatactcccatcaacttagctcaacat 596 Query: 630 acttactggaac 641 || ||||||||| Sbjct: 597 acatactggaac 608
>gb|AY039932.1| Arabidopsis thaliana putative aldose 1-epimerase (At3g17940) mRNA, complete cds Length = 1166 Score = 48.1 bits (24), Expect = 0.036 Identities = 60/72 (83%) Strand = Plus / Plus Query: 570 agacttgacatggaagctataccagctaacaaagccactcctatcagcttggcacagcat 629 |||||||||||||||||| | |||| ||||||| ||||| |||| ||| || || ||| Sbjct: 454 agacttgacatggaagctgttccagagaacaaagatactcccatcaacttagctcaacat 513 Query: 630 acttactggaac 641 || ||||||||| Sbjct: 514 acatactggaac 525
>emb|BX824889.1|CNS0A6X7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZB03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1180 Score = 48.1 bits (24), Expect = 0.036 Identities = 60/72 (83%) Strand = Plus / Plus Query: 570 agacttgacatggaagctataccagctaacaaagccactcctatcagcttggcacagcat 629 |||||||||||||||||| | |||| ||||||| ||||| |||| ||| || || ||| Sbjct: 429 agacttgacatggaagctgttccagagaacaaagatactcccatcaacttagctcaacat 488 Query: 630 acttactggaac 641 || ||||||||| Sbjct: 489 acatactggaac 500
>emb|BX822398.1|CNS0A708 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB34ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1214 Score = 48.1 bits (24), Expect = 0.036 Identities = 60/72 (83%) Strand = Plus / Plus Query: 570 agacttgacatggaagctataccagctaacaaagccactcctatcagcttggcacagcat 629 |||||||||||||||||| | |||| ||||||| ||||| |||| ||| || || ||| Sbjct: 529 agacttgacatggaagctgttccagagaacaaagatactcccatcaacttagctcaacat 588 Query: 630 acttactggaac 641 || ||||||||| Sbjct: 589 acatactggaac 600
>dbj|AB019230.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEB5 Length = 74968 Score = 48.1 bits (24), Expect = 0.036 Identities = 60/72 (83%) Strand = Plus / Minus Query: 570 agacttgacatggaagctataccagctaacaaagccactcctatcagcttggcacagcat 629 |||||||||||||||||| | |||| ||||||| ||||| |||| ||| || || ||| Sbjct: 54824 agacttgacatggaagctgttccagagaacaaagatactcccatcaacttagctcaacat 54765 Query: 630 acttactggaac 641 || ||||||||| Sbjct: 54764 acatactggaac 54753
>gb|BT001908.1| Arabidopsis thaliana clone C105464 putative aldose 1-epimerase (At3g17940) mRNA, complete cds Length = 1002 Score = 48.1 bits (24), Expect = 0.036 Identities = 60/72 (83%) Strand = Plus / Plus Query: 570 agacttgacatggaagctataccagctaacaaagccactcctatcagcttggcacagcat 629 |||||||||||||||||| | |||| ||||||| ||||| |||| ||| || || ||| Sbjct: 409 agacttgacatggaagctgttccagagaacaaagatactcccatcaacttagctcaacat 468 Query: 630 acttactggaac 641 || ||||||||| Sbjct: 469 acatactggaac 480
>gb|BC102446.1| Bos taurus galactose mutarotase (aldose 1-epimerase), mRNA (cDNA clone MGC:127639 IMAGE:7947254), complete cds Length = 2247 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Plus Query: 381 aacaatgggccgaacagccttcatggtggattgaaggggtttgacaaggt 430 ||||| ||||| |||||||| ||||| ||| | || |||||||||||||| Sbjct: 340 aacaacgggcccaacagcctgcatggaggagtcaaagggtttgacaaggt 389
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 191 cgccaccatcacctccctcctc 212 |||||||||||||||||||||| Sbjct: 17812018 cgccaccatcacctccctcctc 17811997
>dbj|AP004348.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0683C09 Length = 185139 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 191 cgccaccatcacctccctcctc 212 |||||||||||||||||||||| Sbjct: 39010 cgccaccatcacctccctcctc 38989
>dbj|AP003849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1753_E03 Length = 126734 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 191 cgccaccatcacctccctcctc 212 |||||||||||||||||||||| Sbjct: 116771 cgccaccatcacctccctcctc 116750
>gb|BT020690.1| Bos taurus galactose mutarotase (aldose 1-epimerase) (GALM), mRNA, complete cds Length = 2194 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Plus Query: 381 aacaatgggccgaacagccttcatggtggattgaaggggtttgacaaggt 430 ||||| ||||| |||||||| ||||| ||| | || |||||||||||||| Sbjct: 357 aacaacgggcccaacagcctgcatggaggagtcaaagggtttgacaaggt 406
>ref|NM_001034795.1| Bos taurus galactose mutarotase (aldose 1-epimerase) (GALM), mRNA Length = 2247 Score = 44.1 bits (22), Expect = 0.57 Identities = 43/50 (86%) Strand = Plus / Plus Query: 381 aacaatgggccgaacagccttcatggtggattgaaggggtttgacaaggt 430 ||||| ||||| |||||||| ||||| ||| | || |||||||||||||| Sbjct: 340 aacaacgggcccaacagcctgcatggaggagtcaaagggtttgacaaggt 389
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 218 cgacgcgcaaggggatctcgcggat 242 |||||||||||||| |||||||||| Sbjct: 2334127 cgacgcgcaaggggctctcgcggat 2334103
>ref|NM_214406.1| Sus scrofa galactose mutarotase (GALM), mRNA Length = 2219 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 378 atcaacaatgggccgaacagccttcatgg 406 |||||||| ||||| |||||||||||||| Sbjct: 352 atcaacaacgggcccaacagccttcatgg 380
>dbj|AB044390.1| Sus scrofa mut mRNA for aldose 1-epimerase, complete cds Length = 2219 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 378 atcaacaatgggccgaacagccttcatgg 406 |||||||| ||||| |||||||||||||| Sbjct: 352 atcaacaacgggcccaacagccttcatgg 380
>ref|XM_466284.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1691 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ggcagcagcaatggcggtgg 132 |||||||||||||||||||| Sbjct: 1107 ggcagcagcaatggcggtgg 1088
>ref|NM_190204.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1509 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aggcagcagcaatggcggtg 131 |||||||||||||||||||| Sbjct: 1470 aggcagcagcaatggcggtg 1489
>gb|AC122457.4| Mus musculus BAC clone RP24-266P11 from chromosome 12, complete sequence Length = 159954 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 agcaaagatggcgaagaagg 511 |||||||||||||||||||| Sbjct: 133234 agcaaagatggcgaagaagg 133253
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 agcaagcaagcaggttcatc 109 |||||||||||||||||||| Sbjct: 13718407 agcaagcaagcaggttcatc 13718388
>gb|AC103576.8| Rattus norvegicus 12 BAC CH230-63N13 (Children's Hospital Oakland Research Institute) complete sequence Length = 219287 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 aagcaagcaagcaggttcat 108 |||||||||||||||||||| Sbjct: 144939 aagcaagcaagcaggttcat 144958
>emb|AL731561.12| Human DNA sequence from clone RP11-463P17 on chromosome 10 Contains a novel gene, gene FLJ32104, a novel gene, the RBP3 gene for retinol binding protein 3, the GDF2 gene for growth differentiation factor 2, the GDF10 gene for growth differentiation factor 10 and three CpG islands, complete sequence Length = 204512 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 gtttgacaaggttgtgtggg 438 |||||||||||||||||||| Sbjct: 18640 gtttgacaaggttgtgtggg 18659
>emb|AL603764.27| Human DNA sequence from clone RP11-481L19 on chromosome 10 Contains the 3' end of the PRSS11 gene for protease serine 11 (IGF binding) and the DMBT1 gene for deleted in malignant brain tumors 1, complete sequence Length = 191741 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 gccaccatcacctccctcct 211 |||||||||||||||||||| Sbjct: 21482 gccaccatcacctccctcct 21501
>emb|AL603965.10| Human DNA sequence from clone RP11-145E20 on chromosome 10 Contains a ARF GTPase-activating protein (MRIP2) pseudogene, the gene for a novel protein similar to annexin A8 (ANXA8) the 5' end of a novel gene similar to LOC195977 (FLJ32754), a novel pseudogene and a novel gene, complete sequence Length = 104811 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 419 gtttgacaaggttgtgtggg 438 |||||||||||||||||||| Sbjct: 100054 gtttgacaaggttgtgtggg 100073
>emb|AJ229043.1| Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22, segment 3/3 Length = 288002 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 aacaaagccactcctatcag 616 |||||||||||||||||||| Sbjct: 139043 aacaaagccactcctatcag 139062
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 gatggcgaagaaggttaccc 517 |||||||||||||||||||| Sbjct: 1320911 gatggcgaagaaggttaccc 1320930
>gb|AF015262.2|AF015262 Homo sapiens chromosome 21 clone Pac 255P7 map 21q-AML, complete sequence Length = 250598 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 aacaaagccactcctatcag 616 |||||||||||||||||||| Sbjct: 148960 aacaaagccactcctatcag 148941
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 agcaagcaagcaggttcatc 109 |||||||||||||||||||| Sbjct: 13713382 agcaagcaagcaggttcatc 13713363
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ggcagcagcaatggcggtgg 132 |||||||||||||||||||| Sbjct: 21469628 ggcagcagcaatggcggtgg 21469647
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aggcagcagcaatggcggtg 131 |||||||||||||||||||| Sbjct: 38624801 aggcagcagcaatggcggtg 38624820 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 tctagcgaagcaagcaagca 101 |||||||||||||||||||| Sbjct: 3727557 tctagcgaagcaagcaagca 3727576
>gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0033D20, from chromosome 3, complete sequence Length = 128707 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 agcaagcaagcaggttcatc 109 |||||||||||||||||||| Sbjct: 109079 agcaagcaagcaggttcatc 109060
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aggcagcagcaatggcggtg 131 |||||||||||||||||||| Sbjct: 145482 aggcagcagcaatggcggtg 145501
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aggcagcagcaatggcggtg 131 |||||||||||||||||||| Sbjct: 82774 aggcagcagcaatggcggtg 82793
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 ggcagcagcaatggcggtgg 132 |||||||||||||||||||| Sbjct: 64555 ggcagcagcaatggcggtgg 64574
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 tctagcgaagcaagcaagca 101 |||||||||||||||||||| Sbjct: 1099 tctagcgaagcaagcaagca 1118
>dbj|BS000195.1| Pan troglodytes chromosome 22 clone:PTB-014E11, map 22, complete sequences Length = 251753 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 aacaaagccactcctatcag 616 |||||||||||||||||||| Sbjct: 78808 aacaaagccactcctatcag 78789
>dbj|BS000111.1| Pan troglodytes chromosome 22 clone:PTB-093K04, map 22, complete sequences Length = 184428 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ccaccatcacctccctcctc 212 |||||||||||||||||||| Sbjct: 164006 ccaccatcacctccctcctc 164025
>dbj|AK121374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C14, full insert sequence Length = 2115 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aggcagcagcaatggcggtg 131 |||||||||||||||||||| Sbjct: 1730 aggcagcagcaatggcggtg 1749
>dbj|AK120665.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159K02, full insert sequence Length = 1691 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 ggcagcagcaatggcggtgg 132 |||||||||||||||||||| Sbjct: 1107 ggcagcagcaatggcggtgg 1088
>ref|XM_565013.1| Anopheles gambiae str. PEST ENSANGP00000029239 (ENSANGG00000022823), partial mRNA Length = 2484 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ctcctcgtccccgacgcgca 226 |||||||||||||||||||| Sbjct: 606 ctcctcgtccccgacgcgca 587
>dbj|AK072733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141N06, full insert sequence Length = 1089 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 aggcagcagcaatggcggtg 131 |||||||||||||||||||| Sbjct: 875 aggcagcagcaatggcggtg 894
>emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067 Length = 340000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 597 aacaaagccactcctatcag 616 |||||||||||||||||||| Sbjct: 51034 aacaaagccactcctatcag 51015
>dbj|AP001710.1| Homo sapiens genomic DNA, chromosome 21q, section 54/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ccaccatcacctccctcctc 212 |||||||||||||||||||| Sbjct: 326357 ccaccatcacctccctcctc 326376
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 498 gatggcgaagaaggttaccc 517 |||||||||||||||||||| Sbjct: 1344502 gatggcgaagaaggttaccc 1344521
>dbj|AB001920.1| Oryza sativa (japonica cultivar-group) gene for phospholipase D, complete cds Length = 5871 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tctagcgaagcaagcaagca 101 |||||||||||||||||||| Sbjct: 1758 tctagcgaagcaagcaagca 1739
>gb|AC131795.3| Mus musculus BAC clone RP24-490N11 from 10, complete sequence Length = 181961 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tcacctccctcctcgtcccc 218 |||||||||||||||||||| Sbjct: 22087 tcacctccctcctcgtcccc 22106
>gb|AC117209.3| Mus musculus BAC clone RP23-281E24 from 10, complete sequence Length = 195911 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 tcacctccctcctcgtcccc 218 |||||||||||||||||||| Sbjct: 186141 tcacctccctcctcgtcccc 186160
>dbj|AP000248.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:P289H18, complete sequence Length = 146847 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ccaccatcacctccctcctc 212 |||||||||||||||||||| Sbjct: 69441 ccaccatcacctccctcctc 69460
>dbj|AP000210.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 8/12, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ccaccatcacctccctcctc 212 |||||||||||||||||||| Sbjct: 345 ccaccatcacctccctcctc 364 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,025,384 Number of Sequences: 3902068 Number of extensions: 4025384 Number of successful extensions: 72457 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 61 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72028 Number of HSP's gapped (non-prelim): 429 length of query: 649 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 626 effective length of database: 17,143,297,704 effective search space: 10731704362704 effective search space used: 10731704362704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)