ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal40b13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101230.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033031H21, full insert sequence Length = 2739 Score = 462 bits (233), Expect = e-127 Identities = 350/389 (89%) Strand = Plus / Plus Query: 1 aaggtagattcatttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgat 60 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 2012 aaggtagattcatttcatcatgagtataactcaatggcatgcaccctcgaatttgttgat 2071 Query: 61 gatatacagtcagcaattgaccatataaatcgttatggaagtgcacacacagattgtatt 120 ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 2072 gatgtgcagtcagcaattgaccatataaatcgctatggaagtgcacacacagattgcatt 2131 Query: 121 atcacaaccgataagaagtcagcagatactttcctacaacaagttgatagtgctgctgtg 180 ||||| || ||| ||| ||||||| ||||| ||||| ||||||||||||||||| || Sbjct: 2132 atcactactgatggaaaggcagcagagacttttctacagcaagttgatagtgctgcggta 2191 Query: 181 ttccataatgcaagcacaaggttctgtgatgggactcgcttcggtctaggtgcagaggtt 240 |||||||||||||||||| |||||||||||||| ||||||| ||||||||||| |||||| Sbjct: 2192 ttccataatgcaagcacacggttctgtgatggggctcgctttggtctaggtgctgaggtt 2251 Query: 241 ggcataagcacagggcgcatacatgcccgtggacctgttggtgtcgacggtcttctaacc 300 |||||||||||||||||||||||||| || || |||||||| || || || || ||||| Sbjct: 2252 ggcataagcacagggcgcatacatgctcgggggcctgttggcgttgatggactcctaaca 2311 Query: 301 actcggtgcattctacgagggagtggacaagtagtgaacggagacaagggagttgtgtac 360 ||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||| ||| Sbjct: 2312 actcgatgcattttacgaggaagtggacaagtagtgaacggcgacaagggagttgtttac 2371 Query: 361 acccacaaggatcttcctttgcaatgagg 389 ||||||| ||| || |||||||| ||||| Sbjct: 2372 acccacagggagctccctttgcagtgagg 2400
>dbj|AK069425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019K03, full insert sequence Length = 3386 Score = 462 bits (233), Expect = e-127 Identities = 350/389 (89%) Strand = Plus / Plus Query: 1 aaggtagattcatttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgat 60 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 1956 aaggtagattcatttcatcatgagtataactcaatggcatgcaccctcgaatttgttgat 2015 Query: 61 gatatacagtcagcaattgaccatataaatcgttatggaagtgcacacacagattgtatt 120 ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 2016 gatgtgcagtcagcaattgaccatataaatcgctatggaagtgcacacacagattgcatt 2075 Query: 121 atcacaaccgataagaagtcagcagatactttcctacaacaagttgatagtgctgctgtg 180 ||||| || ||| ||| ||||||| ||||| ||||| ||||||||||||||||| || Sbjct: 2076 atcactactgatggaaaggcagcagagacttttctacagcaagttgatagtgctgcggta 2135 Query: 181 ttccataatgcaagcacaaggttctgtgatgggactcgcttcggtctaggtgcagaggtt 240 |||||||||||||||||| |||||||||||||| ||||||| ||||||||||| |||||| Sbjct: 2136 ttccataatgcaagcacacggttctgtgatggggctcgctttggtctaggtgctgaggtt 2195 Query: 241 ggcataagcacagggcgcatacatgcccgtggacctgttggtgtcgacggtcttctaacc 300 |||||||||||||||||||||||||| || || |||||||| || || || || ||||| Sbjct: 2196 ggcataagcacagggcgcatacatgctcgggggcctgttggcgttgatggactcctaaca 2255 Query: 301 actcggtgcattctacgagggagtggacaagtagtgaacggagacaagggagttgtgtac 360 ||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||| ||| Sbjct: 2256 actcgatgcattttacgaggaagtggacaagtagtgaacggcgacaagggagttgtttac 2315 Query: 361 acccacaaggatcttcctttgcaatgagg 389 ||||||| ||| || |||||||| ||||| Sbjct: 2316 acccacagggagctccctttgcagtgagg 2344
>ref|NM_190603.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2208 Score = 458 bits (231), Expect = e-125 Identities = 345/383 (90%) Strand = Plus / Plus Query: 1 aaggtagattcatttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgat 60 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 1822 aaggtagattcatttcatcatgagtataactcaatggcatgcaccctcgaatttgttgat 1881 Query: 61 gatatacagtcagcaattgaccatataaatcgttatggaagtgcacacacagattgtatt 120 ||| | |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 1882 gatgtgcagtcagcaattgaccatataaatcgctatggaagtgcacacacagattgcatt 1941 Query: 121 atcacaaccgataagaagtcagcagatactttcctacaacaagttgatagtgctgctgtg 180 ||||| || ||| ||| ||||||| ||||| ||||| ||||||||||||||||| || Sbjct: 1942 atcactactgatggaaaggcagcagagacttttctacagcaagttgatagtgctgcggta 2001 Query: 181 ttccataatgcaagcacaaggttctgtgatgggactcgcttcggtctaggtgcagaggtt 240 |||||||||||||||||| |||||||||||||| ||||||| ||||||||||| |||||| Sbjct: 2002 ttccataatgcaagcacacggttctgtgatggggctcgctttggtctaggtgctgaggtt 2061 Query: 241 ggcataagcacagggcgcatacatgcccgtggacctgttggtgtcgacggtcttctaacc 300 |||||||||||||||||||||||||| || || |||||||| || || || || ||||| Sbjct: 2062 ggcataagcacagggcgcatacatgctcgggggcctgttggcgttgatggactcctaaca 2121 Query: 301 actcggtgcattctacgagggagtggacaagtagtgaacggagacaagggagttgtgtac 360 ||||| |||||| ||||||| |||||||||||||||||||| |||||||||||||| ||| Sbjct: 2122 actcgatgcattttacgaggaagtggacaagtagtgaacggcgacaagggagttgtttac 2181 Query: 361 acccacaaggatcttcctttgca 383 ||||||| ||| || |||||||| Sbjct: 2182 acccacagggagctccctttgca 2204
>gb|AY105865.1| Zea mays PCO085448 mRNA sequence Length = 1685 Score = 369 bits (186), Expect = 7e-99 Identities = 341/390 (87%), Gaps = 2/390 (0%) Strand = Plus / Plus Query: 1 aaggtagattcatttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgat 60 |||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 968 aaggtagactcatttcgtcatgagtatagctcaatggcatgcacagtcgaatttgttgat 1027 Query: 61 gatatacagtcagcaattgaccatataaatcgttatggaagtgcacacacagattgtatt 120 ||| | |||||||| || || || ||||||||||||||||||||||||||||| || || Sbjct: 1028 gatgtgcagtcagctatcgatcacataaatcgttatggaagtgcacacacagactgcatc 1087 Query: 121 atcacaaccgataagaagt-cagcagatactttcctacaacaagttgatagtgctgctgt 179 |||||||| |||| ||||| | ||||| | || || || |||||||||||||| ||||| Sbjct: 1088 atcacaactgata-gaagtgctgcagaggcctttctgcagcaagttgatagtgccgctgt 1146 Query: 180 gttccataatgcaagcacaaggttctgtgatgggactcgcttcggtctaggtgcagaggt 239 ||| |||||||||||||||||||| ||||||||||| || || || |||||||| ||||| Sbjct: 1147 gtttcataatgcaagcacaaggttttgtgatgggacgcgttttgggctaggtgctgaggt 1206 Query: 240 tggcataagcacagggcgcatacatgcccgtggacctgttggtgtcgacggtcttctaac 299 ||||||||| |||| ||||||||||||||| ||||||||||| || || || |||||||| Sbjct: 1207 tggcataagtacagagcgcatacatgcccgcggacctgttggagttgatggacttctaac 1266 Query: 300 cactcggtgcattctacgagggagtggacaagtagtgaacggagacaagggagttgtgta 359 ||||| |||||| | || || ||||||||||| ||||| || ||||||||||| || || Sbjct: 1267 tactcgctgcattttgcgcggtagtggacaagtggtgaatggtgacaagggagtggttta 1326 Query: 360 cacccacaaggatcttcctttgcaatgagg 389 |||||||||||||||||||||||||||||| Sbjct: 1327 cacccacaaggatcttcctttgcaatgagg 1356
>gb|AF022914.1|AF022914 Triticum aestivum pyrroline-5-carboxylate synthetase mRNA, partial cds Length = 452 Score = 303 bits (153), Expect = 4e-79 Identities = 177/185 (95%) Strand = Plus / Plus Query: 1 aaggtagattcatttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgat 60 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 244 aaggtagattcatttcatcatgagtatagctcaatggcatgcaccctcgaatttgttgat 303 Query: 61 gatatacagtcagcaattgaccatataaatcgttatggaagtgcacacacagattgtatt 120 ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 gatgtgcagtcagcgattgaccatataaatcgttatggaagtgcacacacagattgtatt 363 Query: 121 atcacaaccgataagaagtcagcagatactttcctacaacaagttgatagtgctgctgtg 180 |||||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||| Sbjct: 364 atcacaactgataagaagtcagcggatacttttctacaacaagttgacagtgctgctgtg 423 Query: 181 ttcca 185 ||||| Sbjct: 424 ttcca 428
>dbj|AK102633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099M14, full insert sequence Length = 2767 Score = 224 bits (113), Expect = 3e-55 Identities = 314/381 (82%) Strand = Plus / Plus Query: 9 ttcatttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgatgatataca 68 ||||||||||||||||||||| || ||||| ||||| | || |||||||||||| | || Sbjct: 1891 ttcatttcatcatgagtatagttctatggcctgcactgttgagtttgttgatgatgttca 1950 Query: 69 gtcagcaattgaccatataaatcgttatggaagtgcacacacagattgtattatcacaac 128 ||||||||||||||||| |||||||||||||||| || ||||||||||| |||| || Sbjct: 1951 atcagcaattgaccatattcatcgttatggaagtgctcatacagattgtatcgtcactac 2010 Query: 129 cgataagaagtcagcagatactttcctacaacaagttgatagtgctgctgtgttccataa 188 ||| | ||| |||||| ||||| |||| |||||||||||||||||| || ||||| Sbjct: 2011 agatgataaggtagcagagacttttctacgcagagttgatagtgctgctgtatttcataa 2070 Query: 189 tgcaagcacaaggttctgtgatgggactcgcttcggtctaggtgcagaggttggcataag 248 |||||| || || |||| ||||||| |||| || || | ||||| |||||||||||||| Sbjct: 2071 tgcaagtacgagattctctgatggggctcgttttggattgggtgctgaggttggcataag 2130 Query: 249 cacagggcgcatacatgcccgtggacctgttggtgtcgacggtcttctaaccactcggtg 308 ||||||||| || |||||||||||||| || ||||| || ||||| |||| || || || Sbjct: 2131 cacagggcgtatccatgcccgtggaccagtgggtgttgaaggtctcttaactacacgatg 2190 Query: 309 cattctacgagggagtggacaagtagtgaacggagacaagggagttgtgtacacccacaa 368 || | |||||| |||| ||||| ||||| || ||||||| || ||||||||||| || Sbjct: 2191 gatcttgcgagggcgtgggcaagtggtgaatggtgacaaggatgtcgtgtacacccataa 2250 Query: 369 ggatcttcctttgcaatgagg 389 | |||||||||||||||||| Sbjct: 2251 gagtcttcctttgcaatgagg 2271
>gb|AY574031.1| Oryza sativa (japonica cultivar-group) delta-1-pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2151 Score = 220 bits (111), Expect = 4e-54 Identities = 312/379 (82%) Strand = Plus / Plus Query: 9 ttcatttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgatgatataca 68 ||||||||||||||||||||| || ||||| ||||| | || |||||||||||| | || Sbjct: 1773 ttcatttcatcatgagtatagttctatggcctgcactgttgagtttgttgatgatgttca 1832 Query: 69 gtcagcaattgaccatataaatcgttatggaagtgcacacacagattgtattatcacaac 128 ||||||||||||||||| |||||||||||||||| || ||||||||||| |||| || Sbjct: 1833 atcagcaattgaccatattcatcgttatggaagtgctcatacagattgtatcgtcactac 1892 Query: 129 cgataagaagtcagcagatactttcctacaacaagttgatagtgctgctgtgttccataa 188 ||| | ||| |||||| ||||| |||| |||||||||||||||||| || ||||| Sbjct: 1893 agatgataaggtagcagagacttttctacgcagagttgatagtgctgctgtatttcataa 1952 Query: 189 tgcaagcacaaggttctgtgatgggactcgcttcggtctaggtgcagaggttggcataag 248 |||||| || || |||| ||||||| |||| || || | ||||| |||||||||||||| Sbjct: 1953 tgcaagtacgagattctctgatggggctcgttttggattgggtgctgaggttggcataag 2012 Query: 249 cacagggcgcatacatgcccgtggacctgttggtgtcgacggtcttctaaccactcggtg 308 ||||||||| || |||||||||||||| || ||||| || ||||| |||| || || || Sbjct: 2013 cacagggcgtatccatgcccgtggaccagtgggtgttgaaggtctcttaactacacgatg 2072 Query: 309 cattctacgagggagtggacaagtagtgaacggagacaagggagttgtgtacacccacaa 368 || | |||||| |||| ||||| ||||| || ||||||| || ||||||||||| || Sbjct: 2073 gatcttgcgagggcgtgggcaagtggtgaatggtgacaaggatgtcgtgtacacccataa 2132 Query: 369 ggatcttcctttgcaatga 387 | |||||||||||||||| Sbjct: 2133 gagtcttcctttgcaatga 2151
>dbj|D49714.1| Oryza sativa mRNA for deltal-pyrroline-5-carboxylate synthetase, complete cds Length = 2549 Score = 216 bits (109), Expect = 7e-53 Identities = 313/381 (82%) Strand = Plus / Plus Query: 9 ttcatttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgatgatataca 68 ||||||||||||||||||||| || ||||| ||||| | || |||||||||||| | || Sbjct: 1871 ttcatttcatcatgagtatagttctatggcctgcactgttgagtttgttgatgatgttca 1930 Query: 69 gtcagcaattgaccatataaatcgttatggaagtgcacacacagattgtattatcacaac 128 ||||||||||||||||| |||||||||||||||| || ||||||||||| |||| || Sbjct: 1931 atcagcaattgaccatattcatcgttatggaagtgctcatacagattgtatcgtcactac 1990 Query: 129 cgataagaagtcagcagatactttcctacaacaagttgatagtgctgctgtgttccataa 188 ||| | ||| |||||| ||||| |||| |||||||||||||||||| || ||||| Sbjct: 1991 agatgataaggtagcagagacttttctacgcagagttgatagtgctgctgtatttcataa 2050 Query: 189 tgcaagcacaaggttctgtgatgggactcgcttcggtctaggtgcagaggttggcataag 248 |||||| || || |||| ||||||| |||| || || | ||||| |||||||||||||| Sbjct: 2051 tgcaagtacgagattctctgatggggctcgttttggattgggtgctgaggttggcataag 2110 Query: 249 cacagggcgcatacatgcccgtggacctgttggtgtcgacggtcttctaaccactcggtg 308 ||||||||| || |||||||||||||| || ||||| || ||||| |||| || || || Sbjct: 2111 cacagggcgtatccatgcccgtggaccagtgggtgttgaaggtctcttaactacacgatg 2170 Query: 309 cattctacgagggagtggacaagtagtgaacggagacaagggagttgtgtacacccacaa 368 || | ||||| |||| ||||| ||||| || ||||||| || ||||||||||| || Sbjct: 2171 gatcttgcgaggacgtgggcaagtggtgaatggtgacaaggatgtcgtgtacacccataa 2230 Query: 369 ggatcttcctttgcaatgagg 389 | |||||||||||||||||| Sbjct: 2231 gagtcttcctttgcaatgagg 2251
>gb|AY109740.1| Zea mays CL2942_1 mRNA sequence Length = 1961 Score = 198 bits (100), Expect = 2e-47 Identities = 241/288 (83%) Strand = Plus / Plus Query: 6 agattcatttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgatgatat 65 ||||||||| |||||||| |||||||| ||||| ||||| | || || ||||||||| | Sbjct: 1223 agattcattccatcatgaatatagctctatggcctgcacaattgagttcgttgatgatgt 1282 Query: 66 acagtcagcaattgaccatataaatcgttatggaagtgcacacacagattgtattatcac 125 ||||||||||||| |||||||| ||||||||||||||||||| |||||||| |||||||| Sbjct: 1283 acagtcagcaattaaccatatacatcgttatggaagtgcacatacagattgcattatcac 1342 Query: 126 aaccgataagaagtcagcagatactttcctacaacaagttgatagtgctgctgtgttcca 185 || ||| | || |||||| ||||| || | |||||||||||||||||||| || || Sbjct: 1343 cacagatgataaagtagcagaaacttttctgcggcaagttgatagtgctgctgtatttca 1402 Query: 186 taatgcaagcacaaggttctgtgatgggactcgcttcggtctaggtgcagaggttggcat 245 |||||| || ||| | |||| ||||||| |||| || || | ||||| ||||||||||| Sbjct: 1403 taatgcgagtacacgattctctgatggggctcgttttggattgggtgccgaggttggcat 1462 Query: 246 aagcacagggcgcatacatgcccgtggacctgttggtgtcgacggtct 293 |||||||||||| |||||||| || || ||||| ||||| || ||||| Sbjct: 1463 aagcacagggcgtatacatgctcgcgggcctgtgggtgttgaaggtct 1510
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 161 bits (81), Expect = 3e-36 Identities = 96/101 (95%) Strand = Plus / Plus Query: 1 aaggtagattcatttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgat 60 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 36432004 aaggtagattcatttcatcatgagtataactcaatggcatgcaccctcgaatttgttgat 36432063 Query: 61 gatatacagtcagcaattgaccatataaatcgttatggaag 101 ||| | |||||||||||||||||||||||||| |||||||| Sbjct: 36432064 gatgtgcagtcagcaattgaccatataaatcgctatggaag 36432104 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 308 gcattctacgagggagtggacaagtagtgaacggagacaagggagttgtgtacacccaca 367 ||||| ||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 36432908 gcattttacgaggaagtggacaagtagtgaacggcgacaagggagttgtttacacccaca 36432967 Query: 368 aggatcttcctttgcaatgagg 389 ||| || |||||||| ||||| Sbjct: 36432968 gggagctccctttgcagtgagg 36432989 Score = 93.7 bits (47), Expect = 7e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 169 agtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgcttcggtcta 228 |||||||| || |||||||||||||||||| |||||||||||||| ||||||| |||||| Sbjct: 36432406 agtgctgcggtattccataatgcaagcacacggttctgtgatggggctcgctttggtcta 36432465 Query: 229 ggtgcagaggt 239 ||||| ||||| Sbjct: 36432466 ggtgctgaggt 36432476 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 236 aggttggcataagcacagggcgcatacatgcccgtggacctgttgg 281 ||||||||||||||||||||||||||||||| || || |||||||| Sbjct: 36432623 aggttggcataagcacagggcgcatacatgctcgggggcctgttgg 36432668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 100 agtgcacacacagattgtattatcacaaccgataagaagtcagcagatactttcctacaa 159 ||||||||||||||||| |||||||| || ||| ||| ||||||| ||||| ||||| Sbjct: 36432244 agtgcacacacagattgcattatcactactgatggaaaggcagcagagacttttctacag 36432303 Query: 160 caagttgatag 170 ||||||||||| Sbjct: 36432304 caagttgatag 36432314
>dbj|AP004127.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0005H10 Length = 142885 Score = 161 bits (81), Expect = 3e-36 Identities = 96/101 (95%) Strand = Plus / Plus Query: 1 aaggtagattcatttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgat 60 |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 83843 aaggtagattcatttcatcatgagtataactcaatggcatgcaccctcgaatttgttgat 83902 Query: 61 gatatacagtcagcaattgaccatataaatcgttatggaag 101 ||| | |||||||||||||||||||||||||| |||||||| Sbjct: 83903 gatgtgcagtcagcaattgaccatataaatcgctatggaag 83943 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 308 gcattctacgagggagtggacaagtagtgaacggagacaagggagttgtgtacacccaca 367 ||||| ||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 84747 gcattttacgaggaagtggacaagtagtgaacggcgacaagggagttgtttacacccaca 84806 Query: 368 aggatcttcctttgcaatgagg 389 ||| || |||||||| ||||| Sbjct: 84807 gggagctccctttgcagtgagg 84828 Score = 93.7 bits (47), Expect = 7e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 169 agtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgcttcggtcta 228 |||||||| || |||||||||||||||||| |||||||||||||| ||||||| |||||| Sbjct: 84245 agtgctgcggtattccataatgcaagcacacggttctgtgatggggctcgctttggtcta 84304 Query: 229 ggtgcagaggt 239 ||||| ||||| Sbjct: 84305 ggtgctgaggt 84315 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 236 aggttggcataagcacagggcgcatacatgcccgtggacctgttgg 281 ||||||||||||||||||||||||||||||| || || |||||||| Sbjct: 84462 aggttggcataagcacagggcgcatacatgctcgggggcctgttgg 84507 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 100 agtgcacacacagattgtattatcacaaccgataagaagtcagcagatactttcctacaa 159 ||||||||||||||||| |||||||| || ||| ||| ||||||| ||||| ||||| Sbjct: 84083 agtgcacacacagattgcattatcactactgatggaaaggcagcagagacttttctacag 84142 Query: 160 caagttgatag 170 ||||||||||| Sbjct: 84143 caagttgatag 84153
>dbj|AB193551.1| Triticum aestivum WP5CS mRNA for delta1-pyrroline-5-carboxylate synthetase, complete cds Length = 2405 Score = 139 bits (70), Expect = 1e-29 Identities = 268/334 (80%) Strand = Plus / Plus Query: 55 gttgatgatatacagtcagcaattgaccatataaatcgttatggaagtgcacacacagat 114 ||||||||| |||| |||||||||||||||||| |||| |||||||||||||| ||||| Sbjct: 1901 gttgatgatgtacaatcagcaattgaccatatacatcgctatggaagtgcacatacagac 1960 Query: 115 tgtattatcacaaccgataagaagtcagcagatactttcctacaacaagttgatagtgct 174 ||| | |||| || ||| | || |||||| || || |||| ||||||||||||||| Sbjct: 1961 tgtgtggtcactacagatgataaagtagcagagacctttctacgtcaagttgatagtgct 2020 Query: 175 gctgtgttccataatgcaagcacaaggttctgtgatgggactcgcttcggtctaggtgca 234 || || || | || || || ||||| |||| ||||| |||| || || || ||||| Sbjct: 2021 gccgtattatacaacgcgagtacaagattctccgatggtgctcgttttgggctcggtgct 2080 Query: 235 gaggttggcataagcacagggcgcatacatgcccgtggacctgttggtgtcgacggtctt 294 |||||||||||||| ||||| || |||||||| ||||||||||| ||||| || |||||| Sbjct: 2081 gaggttggcataagtacaggccgtatacatgcacgtggacctgtgggtgttgaaggtctt 2140 Query: 295 ctaaccactcggtgcattctacgagggagtggacaagtagtgaacggagacaagggagtt 354 |||| || || || | ||||||||| || ||||| ||||| || ||||||| ||| Sbjct: 2141 ttaactacacgatggctcttacgagggaaagggcaagtggtgaatggtgacaaggatgtt 2200 Query: 355 gtgtacacccacaaggatcttcctttgcaatgag 388 | ||||||||| ||| ||||||||||||||||| Sbjct: 2201 gagtacacccataagagtcttcctttgcaatgag 2234
>gb|AY888045.1| Triticum aestivum delta 1-pyrroline-5-carboxylate synthetase mRNA, complete cds Length = 2260 Score = 131 bits (66), Expect = 3e-27 Identities = 267/334 (79%) Strand = Plus / Plus Query: 55 gttgatgatatacagtcagcaattgaccatataaatcgttatggaagtgcacacacagat 114 ||||||||| |||| |||||||||||||||||| |||| |||||||||||||| ||||| Sbjct: 1927 gttgatgatgtacaatcagcaattgaccatatacatcgctatggaagtgcacatacagac 1986 Query: 115 tgtattatcacaaccgataagaagtcagcagatactttcctacaacaagttgatagtgct 174 ||| | |||| || ||| | || |||||| || || |||| ||||||||||||||| Sbjct: 1987 tgtgtggtcactacagatgataaagtagcagagacctttctacgtcaagttgatagtgct 2046 Query: 175 gctgtgttccataatgcaagcacaaggttctgtgatgggactcgcttcggtctaggtgca 234 || || || | || || || ||||| |||| ||||| |||| || || || ||||| Sbjct: 2047 gccgtattatacaacgcgagtacaagattctccgatggtgctcgttttggactcggtgct 2106 Query: 235 gaggttggcataagcacagggcgcatacatgcccgtggacctgttggtgtcgacggtctt 294 |||||||||||||| ||||| || |||||||| ||||||||||| ||||| || |||||| Sbjct: 2107 gaggttggcataagtacaggccgtatacatgcacgtggacctgtgggtgttgaaggtctt 2166 Query: 295 ctaaccactcggtgcattctacgagggagtggacaagtagtgaacggagacaagggagtt 354 |||| || || || | ||||||||| || ||||| ||||| || ||||||| ||| Sbjct: 2167 ttaactacacgatggctcttacgagggaaagggcaagtggtgaatggtgacaaggatgtt 2226 Query: 355 gtgtacacccacaaggatcttcctttgcaatgag 388 | ||||||||| ||| |||||||||||||||| Sbjct: 2227 gagtacacccataagagccttcctttgcaatgag 2260
>dbj|AK120668.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160C21, full insert sequence Length = 3713 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 308 gcattctacgagggagtggacaagtagtgaacggagacaagggagttgtgtacacccaca 367 ||||| ||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 3012 gcattttacgaggaagtggacaagtagtgaacggcgacaagggagttgtttacacccaca 2953 Query: 368 aggatcttcctttgcaatgagg 389 ||| || |||||||| ||||| Sbjct: 2952 gggagctccctttgcagtgagg 2931 Score = 93.7 bits (47), Expect = 7e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 169 agtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgcttcggtcta 228 |||||||| || |||||||||||||||||| |||||||||||||| ||||||| |||||| Sbjct: 3514 agtgctgcggtattccataatgcaagcacacggttctgtgatggggctcgctttggtcta 3455 Query: 229 ggtgcagaggt 239 ||||| ||||| Sbjct: 3454 ggtgctgaggt 3444 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 236 aggttggcataagcacagggcgcatacatgcccgtggacctgttgg 281 ||||||||||||||||||||||||||||||| || || |||||||| Sbjct: 3297 aggttggcataagcacagggcgcatacatgctcgggggcctgttgg 3252 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Minus Query: 100 agtgcacacacagattgtattatcacaaccgataagaagtcagcagatactttcctacaa 159 ||||||||||||||||| |||||||| || ||| ||| ||||||| ||||| ||||| Sbjct: 3676 agtgcacacacagattgcattatcactactgatggaaaggcagcagagacttttctacag 3617 Query: 160 caagttgatag 170 ||||||||||| Sbjct: 3616 caagttgatag 3606
>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06, complete sequence Length = 145323 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 9 ttcatttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgatgatataca 68 ||||||||||||||||||||| || ||||| ||||| | || |||||||||||| | || Sbjct: 73733 ttcatttcatcatgagtatagttctatggcctgcactgttgagtttgttgatgatgttca 73674 Query: 69 gtcagcaattgaccatataaatcgttatggaag 101 ||||||||||||||||| ||||||||||||| Sbjct: 73673 atcagcaattgaccatattcatcgttatggaag 73641 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 236 aggttggcataagcacagggcgcatacatgcccgtggacctgttggtgtcgacggtct 293 |||||||||||||||||||||| || |||||||||||||| || ||||| || ||||| Sbjct: 73188 aggttggcataagcacagggcgtatccatgcccgtggaccagtgggtgttgaaggtct 73131 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 316 cgagggagtggacaagtagtgaacggagacaagggagttgtgtacacccacaaggatctt 375 |||||| |||| ||||| ||||| || ||||||| || ||||||||||| ||| |||| Sbjct: 72943 cgagggcgtgggcaagtggtgaatggtgacaaggatgtcgtgtacacccataagagtctt 72884 Query: 376 cctttgcaatgagg 389 |||||||||||||| Sbjct: 72883 cctttgcaatgagg 72870 Score = 44.1 bits (22), Expect = 0.55 Identities = 43/50 (86%) Strand = Plus / Minus Query: 169 agtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcg 218 ||||||||||| || ||||||||||| || || |||| ||||||| |||| Sbjct: 73325 agtgctgctgtatttcataatgcaagtacgagattctctgatggggctcg 73276
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 89.7 bits (45), Expect = 1e-14 Identities = 81/93 (87%) Strand = Plus / Minus Query: 9 ttcatttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgatgatataca 68 ||||||||||||||||||||| || ||||| ||||| | || |||||||||||| | || Sbjct: 22230468 ttcatttcatcatgagtatagttctatggcctgcactgttgagtttgttgatgatgttca 22230409 Query: 69 gtcagcaattgaccatataaatcgttatggaag 101 ||||||||||||||||| ||||||||||||| Sbjct: 22230408 atcagcaattgaccatattcatcgttatggaag 22230376 Score = 67.9 bits (34), Expect = 4e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 236 aggttggcataagcacagggcgcatacatgcccgtggacctgttggtgtcgacggtct 293 |||||||||||||||||||||| || |||||||||||||| || ||||| || ||||| Sbjct: 22229923 aggttggcataagcacagggcgtatccatgcccgtggaccagtgggtgttgaaggtct 22229866 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 316 cgagggagtggacaagtagtgaacggagacaagggagttgtgtacacccacaaggatctt 375 |||||| |||| ||||| ||||| || ||||||| || ||||||||||| ||| |||| Sbjct: 22229678 cgagggcgtgggcaagtggtgaatggtgacaaggatgtcgtgtacacccataagagtctt 22229619 Query: 376 cctttgcaatgagg 389 |||||||||||||| Sbjct: 22229618 cctttgcaatgagg 22229605 Score = 44.1 bits (22), Expect = 0.55 Identities = 43/50 (86%) Strand = Plus / Minus Query: 169 agtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcg 218 ||||||||||| || ||||||||||| || || |||| ||||||| |||| Sbjct: 22230060 agtgctgctgtatttcataatgcaagtacgagattctctgatggggctcg 22230011
>gb|U92286.1|ADU92286 Actinidia deliciosa pyrroline-5-carboxylate synthetase mRNA, complete cds Length = 2378 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 187 aatgcaagcacaaggttctgtgatgggactcgcttcggtctaggtgcagaggttggcata 246 |||||||||||||| || |||| ||| |||| ||||| ||||||||||||||||| ||| Sbjct: 1959 aatgcaagcacaagatttagtgacggggctcgtttcgggctaggtgcagaggttgggata 2018 Query: 247 agcacagggcgcatacatgcccgtggacctgttggtgt 284 || ||| | | |||||||| ||||||||||| ||||| Sbjct: 2019 agtacaagtaggatacatgcacgtggacctgtcggtgt 2056
>dbj|AB097403.1| Raphanus sativus P5CS mRNA for delta1-pyrroline-5-carboxylate synthetase, partial cds Length = 712 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgc 219 ||||| || ||||||||||||||||| || ||||||||||| |||| |||||| ||| Sbjct: 554 caagtagacagtgctgctgtgttccacaacgcaagcacaagattctctgatggttttcga 613 Query: 220 ttcggtctaggtgcagaggttggcataagcacagggcgcatacatgcccgtgg 272 || || || ||||| |||||||| ||||||||||| | || ||||||||||| Sbjct: 614 tttggacttggtgctgaggttgggataagcacaggcaggatccatgcccgtgg 666
>gb|AY108698.1| Zea mays PCO099071 mRNA sequence Length = 599 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 229 ggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgttggtgtcgac 288 ||||| ||||||||||||||||||||||| |||||||| ||||| || || ||||| || Sbjct: 555 ggtgctgaggttggcataagcacagggcgtatacatgctcgtgggcccgtgggtgttgaa 496 Query: 289 ggtcttctaaccactcggtgcattctacgagggagtggacaagtagtgaacggagacaa 347 ||||| |||| || || || || | |||||||| || ||||| |||||||| ||||| Sbjct: 495 ggtctcttaacaacgcgctggatcatgcgagggagcgggcaagtggtgaacggtgacaa 437
>emb|X98422.1|MSP5CS2 M.sativa mRNA for delta-1-pyrroline-5-carboxylate synthase, P5CS-2 Length = 1250 Score = 67.9 bits (34), Expect = 4e-08 Identities = 78/93 (83%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgc 219 |||||||| ||||||||||| ||||| |||||||| ||||| || || |||||| | || Sbjct: 616 caagttgacagtgctgctgtattccacaatgcaagtacaagattttgcgatggggcacga 675 Query: 220 ttcggtctaggtgcagaggttggcataagcaca 252 || || || ||||||||||| || ||||||||| Sbjct: 676 tttgggcttggtgcagaggtnggaataagcaca 708
>gb|AY492005.1| Glycine max delta-pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2148 Score = 65.9 bits (33), Expect = 2e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgc 219 ||||| || ||||||||||| ||||| ||||| || ||||| ||| |||||||| | || Sbjct: 1924 caagtagacagtgctgctgttttccacaatgctagtacaagattcagtgatggggcacga 1983 Query: 220 ttcggtctaggtgcagaggttggcataag 248 || || ||||||||||||||||| ||||| Sbjct: 1984 tttggactaggtgcagaggttggaataag 2012 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 71 cagcaattgaccatataaatcgttatggaagtgcaca 107 |||| ||||| |||||||||| ||||||||||||||| Sbjct: 1835 cagctattgatcatataaatctttatggaagtgcaca 1871
>gb|AF314811.1|AF314811 Brassica napus delta 1-pyrroline-5-carboxylate synthetase A mRNA, complete cds Length = 2551 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 172 gctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgcttcggtctaggt 231 |||||||||||||| || ||||||||||| |||| |||||| ||| || || || ||| Sbjct: 2029 gctgctgtgttccacaacgcaagcacaagattctctgatggttttcgatttggacttggt 2088 Query: 232 gcagaggttggcataagcacagggcgcatacatgcccgtgg 272 || ||||| || |||||||||||| | || ||||||||||| Sbjct: 2089 gctgaggtggggataagcacagggaggatccatgcccgtgg 2129 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 95 atggaagtgcacacacagattgtatt 120 ||||||||||||||||||| |||||| Sbjct: 1952 atggaagtgcacacacagactgtatt 1977
>dbj|AP006103.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11J24, TM0185, complete sequence Length = 121047 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Plus Query: 167 atagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgcttcggtc 226 ||||||||||||| ||||| |||||||| |||||||| |||||||| | ||||| || | Sbjct: 63720 atagtgctgctgtattccacaatgcaagtacaaggttttgtgatggagcacgctttgggc 63779 Query: 227 taggtgcagaggt 239 | ||||||||||| Sbjct: 63780 ttggtgcagaggt 63792
>emb|AJ715851.1| Glycine max partial p5cs gene for delta 1-pyrroline-5-carboxylate synthetase, cultivar Williams Length = 831 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgc 219 |||||||| ||||||||||| ||||| |||||||| || |||| |||||||| | ||| Sbjct: 705 caagttgacagtgctgctgtattccacaatgcaagtacgcggttttgtgatggagcacgc 764 Query: 220 ttcggtctaggtgcagaggttgg 242 || || || |||||||||||||| Sbjct: 765 tttgggcttggtgcagaggttgg 787
>emb|AJ005686.1|VVI5686 Vitis vinifera mRNA for pyrroline-5-carboxylate synthetase (delta 1 type) Length = 2374 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcg 218 |||||||||||||||||||| || || ||||| |||||||| || ||||||||| |||| Sbjct: 1974 caagttgatagtgctgctgtctttcacaatgctagcacaagattttgtgatggggctcg 2032 Score = 48.1 bits (24), Expect = 0.035 Identities = 78/96 (81%) Strand = Plus / Plus Query: 13 tttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgatgatatacagtca 72 |||||||||||||||| |||||||| ||||| | || ||||||||||| |||| || Sbjct: 1830 tttcatcatgagtataattcaatggcttgcactgttgagattgttgatgatgtacattct 1889 Query: 73 gcaattgaccatataaatcgttatggaagtgcacac 108 || ||||| ||||| | || |||||||||||||| Sbjct: 1890 gccattgatcatattcaccgacatggaagtgcacac 1925
>ref|NM_115419.3| Arabidopsis thaliana catalytic/ glutamate 5-kinase/ glutamate-5-semialdehyde dehydrogenase AT3G55610 mRNA, complete cds Length = 2541 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgc 219 ||||| || ||||||||||| ||||| |||||||||||||| |||| |||||| | | Sbjct: 2028 caagtggacagtgctgctgttttccacaatgcaagcacaagattctctgatggttttagg 2087 Query: 220 ttcggtctaggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgtt 279 ||||| || ||||| ||||| || ||||||||| | | || ||||||||||| || ||| Sbjct: 2088 ttcggacttggtgctgaggtgggaataagcacaagcaggattcatgcccgtggtccagtt 2147 Query: 280 gg 281 || Sbjct: 2148 gg 2149 Score = 44.1 bits (22), Expect = 0.55 Identities = 46/54 (85%) Strand = Plus / Plus Query: 325 ggacaagtagtgaacggagacaagggagttgtgtacacccacaaggatcttcct 378 |||||||| ||| | |||||||| ||| | || |||||||| |||||||||||| Sbjct: 2193 ggacaagttgtggatggagacaatggaatcgtttacacccataaggatcttcct 2246
>emb|Y09355.1|ATP5CS2 A.thaliana mRNA for pyrroline-5-carboxlyate synthetase Length = 2440 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgc 219 ||||| || ||||||||||| ||||| |||||||||||||| |||| |||||| | | Sbjct: 1998 caagtggacagtgctgctgttttccacaatgcaagcacaagattctctgatggttttagg 2057 Query: 220 ttcggtctaggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgtt 279 ||||| || ||||| ||||| || ||||||||| | | || ||||||||||| || ||| Sbjct: 2058 ttcggacttggtgctgaggtgggaataagcacaagcaggattcatgcccgtggtccagtt 2117 Query: 280 gg 281 || Sbjct: 2118 gg 2119 Score = 44.1 bits (22), Expect = 0.55 Identities = 46/54 (85%) Strand = Plus / Plus Query: 325 ggacaagtagtgaacggagacaagggagttgtgtacacccacaaggatcttcct 378 |||||||| ||| | |||||||| ||| | || |||||||| |||||||||||| Sbjct: 2163 ggacaagttgtggatggagacaatggaatcgtttacacccataaggatcttcct 2216
>gb|AY091766.1| Arabidopsis thaliana AT3g55610/F1I16_20 mRNA, complete cds Length = 2517 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgc 219 ||||| || ||||||||||| ||||| |||||||||||||| |||| |||||| | | Sbjct: 2028 caagtggacagtgctgctgttttccacaatgcaagcacaagattctctgatggttttagg 2087 Query: 220 ttcggtctaggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgtt 279 ||||| || ||||| ||||| || ||||||||| | | || ||||||||||| || ||| Sbjct: 2088 ttcggacttggtgctgaggtgggaataagcacaagcaggattcatgcccgtggtccagtt 2147 Query: 280 gg 281 || Sbjct: 2148 gg 2149 Score = 44.1 bits (22), Expect = 0.55 Identities = 46/54 (85%) Strand = Plus / Plus Query: 325 ggacaagtagtgaacggagacaagggagttgtgtacacccacaaggatcttcct 378 |||||||| ||| | |||||||| ||| | || |||||||| |||||||||||| Sbjct: 2193 ggacaagttgtggatggagacaatggaatcgtttacacccataaggatcttcct 2246
>dbj|AK220885.1| Arabidopsis thaliana mRNA for delta-1-pyrroline-5-carboxylate synthetase, partial cds, clone: RAFL22-44-G03 Length = 567 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgc 219 ||||| || ||||||||||| ||||| |||||||||||||| |||| |||||| | | Sbjct: 44 caagtggacagtgctgctgttttccacaatgcaagcacaagattctctgatggttttagg 103 Query: 220 ttcggtctaggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgtt 279 ||||| || ||||| ||||| || ||||||||| | | || ||||||||||| || ||| Sbjct: 104 ttcggacttggtgctgaggtgggaataagcacaagcaggattcatgcccgtggtccagtt 163 Query: 280 gg 281 || Sbjct: 164 gg 165 Score = 44.1 bits (22), Expect = 0.55 Identities = 46/54 (85%) Strand = Plus / Plus Query: 325 ggacaagtagtgaacggagacaagggagttgtgtacacccacaaggatcttcct 378 |||||||| ||| | |||||||| ||| | || |||||||| |||||||||||| Sbjct: 209 ggacaagttgtggatggagacaatggaatcgtttacacccataaggatcttcct 262
>gb|AF314812.1|AF314812 Brassica napus delta 1-pyrroline-5-carboxylate synthetase B mRNA, complete cds Length = 2529 Score = 60.0 bits (30), Expect = 9e-06 Identities = 99/122 (81%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgc 219 ||||| || ||||||||||| |||| |||||||||||||| ||||||||||| ||| Sbjct: 2046 caagtggacagtgctgctgttatccacaatgcaagcacaagattctgtgatggttttcga 2105 Query: 220 ttcggtctaggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgtt 279 || || || ||||| ||||| || ||||||||| | | || ||||||||||| || ||| Sbjct: 2106 tttggacttggtgctgaggtgggaataagcacaagcaggatccatgcccgtggtccagtt 2165 Query: 280 gg 281 || Sbjct: 2166 gg 2167
>gb|DQ226732.1| Boechera divaricarpa isolate SLW-A-B08 mRNA sequence Length = 451 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgg 212 ||||| || ||||||||||| ||||| |||||||||||||| |||| |||||| Sbjct: 357 caagtggacagtgctgctgttttccacaatgcaagcacaagattctctgatgg 305
>emb|AJ278818.1|MTR278818 Medicago truncatula mRNA for pyrroline-5-carboxylate synthetase 1 (p5CS1 gene) Length = 2520 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 71 cagcaattgaccatataaatcgttatggaagtgcaca 107 |||| ||||| |||||||||||||||||||||||||| Sbjct: 1905 cagctattgatcatataaatcgttatggaagtgcaca 1941
>dbj|AB056452.2| Vigna unguiculata VuP5CS mRNA, complete cds Length = 2791 Score = 58.0 bits (29), Expect = 4e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgc 219 |||||||| |||||||| || ||||| |||||||| ||| | || |||||||| | ||| Sbjct: 2089 caagttgacagtgctgcagttttccacaatgcaagtacacgattttgtgatggagcacgc 2148 Query: 220 ttcggtctaggtgcagaggttggcataagcaca 252 || || || |||||||||||||| || |||||| Sbjct: 2149 tttggccttggtgcagaggttggaattagcaca 2181
>emb|X86778.1|ATP5CSBGN A.thaliana p5csB gene Length = 5789 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 169 agtgctgctgtgttccataatgcaagcacaaggttctgtgatgg 212 ||||||||||| ||||| |||||||||||||| |||| |||||| Sbjct: 4712 agtgctgctgttttccacaatgcaagcacaagattctctgatgg 4755 Score = 44.1 bits (22), Expect = 0.55 Identities = 46/54 (85%) Strand = Plus / Plus Query: 325 ggacaagtagtgaacggagacaagggagttgtgtacacccacaaggatcttcct 378 |||||||| ||| | |||||||| ||| | || |||||||| |||||||||||| Sbjct: 5065 ggacaagttgtggatggagacaatggaatcgtttacacccataaggatcttcct 5118
>emb|AL161667.1|ATF1I16 Arabidopsis thaliana DNA chromosome 3, BAC clone F1I16 Length = 103785 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 169 agtgctgctgtgttccataatgcaagcacaaggttctgtgatgg 212 ||||||||||| ||||| |||||||||||||| |||| |||||| Sbjct: 12811 agtgctgctgttttccacaatgcaagcacaagattctctgatgg 12768 Score = 44.1 bits (22), Expect = 0.55 Identities = 46/54 (85%) Strand = Plus / Minus Query: 325 ggacaagtagtgaacggagacaagggagttgtgtacacccacaaggatcttcct 378 |||||||| ||| | |||||||| ||| | || |||||||| |||||||||||| Sbjct: 12458 ggacaagttgtggatggagacaatggaatcgtttacacccataaggatcttcct 12405
>dbj|AP004477.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT12K07, TM0011b, complete sequence Length = 44662 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 164 ttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgcttcg 223 |||||| ||| ||||| || || |||||||||||||| || ||||||||| | | |||| Sbjct: 20688 ttgataatgcggctgtttttcacaatgcaagcacaagattttgtgatggggcactattcg 20629 Query: 224 gtctaggtgcagaggt 239 | |||||||||||||| Sbjct: 20628 gactaggtgcagaggt 20613 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 13 tttcatcatgagtatagctcaatggcatgcacgctcgaatttgttgatgatatacagtca 72 |||||||||||||| || ||| |||| ||||| | ||| |||| |||||| | || || Sbjct: 21248 tttcatcatgagtacagttcattggcttgcactgttgaaattgtggatgatgtgcatgca 21189 Query: 73 gcaattgaccatataaatcgttatggaag 101 || ||||| |||||||||| ||||||||| Sbjct: 21188 gctattgatcatataaatctttatggaag 21160
>gb|AF067967.1|AF067967 Mesembryanthemum crystallinum pyrroline-5-carboxylate synthetase (P5CS) mRNA, complete cds Length = 2992 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 162 agttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgg 212 |||||| ||||||||||| | ||||||||||| ||||| ||||||||||| Sbjct: 2117 agttgacagtgctgctgtacttcataatgcaagtacaagattctgtgatgg 2167
>gb|AY804246.1| Chorispora bungeana delta-1-pyrroline 5-carboxylase synthetase mRNA, complete cds Length = 2181 Score = 50.1 bits (25), Expect = 0.009 Identities = 91/113 (80%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgc 219 ||||| || ||||||||||| ||||| || ||||||||||| |||| ||||| ||| Sbjct: 1924 caagtagacagtgctgctgtattccacaacgcaagcacaagattctcagatggttttcga 1983 Query: 220 ttcggtctaggtgcagaggttggcataagcacagggcgcatacatgcccgtgg 272 ||||| || ||||| ||||| || ||||||||| | | || ||||||||||| Sbjct: 1984 ttcggacttggtgctgaggtgggaataagcacaagcaggatccatgcccgtgg 2036 Score = 44.1 bits (22), Expect = 0.55 Identities = 46/54 (85%) Strand = Plus / Plus Query: 325 ggacaagtagtgaacggagacaagggagttgtgtacacccacaaggatcttcct 378 |||||||| ||| | ||| |||| ||| |||| |||||||| |||||||||||| Sbjct: 2089 ggacaagttgtggatggaaacaatggaattgtttacacccataaggatcttcct 2142
>gb|AF503911.1| Suaeda maritima subsp. salsa delta 1-pyrroline-5-carboxylate synthetase (P5CS) mRNA, partial cds Length = 967 Score = 50.1 bits (25), Expect = 0.009 Identities = 76/93 (81%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatgggactcgc 219 ||||| |||||||||||||| || || ||||||||||| || || ||||| ||| |||| Sbjct: 452 caagtagatagtgctgctgtatttcacaatgcaagcacgagattttgtgacggggctcgt 511 Query: 220 ttcggtctaggtgcagaggttggcataagcaca 252 || || | ||||| |||||||| || |||||| Sbjct: 512 tttgggttgggtgctgaggttgggattagcaca 544
>ref|NM_201912.1| Arabidopsis thaliana P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1) AT2G39800 (P5CS1) transcript variant AT2G39800.2 mRNA, complete cds Length = 2519 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttct 205 ||||| ||||| |||||||||||||| || || |||||||| |||| Sbjct: 1940 caagtggatagcgctgctgtgttccacaacgccagcacaagattct 1985
>ref|NM_129539.2| Arabidopsis thaliana P5CS1 (DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1) AT2G39800 (P5CS1) transcript variant AT2G39800.1 mRNA, complete cds Length = 2886 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttct 205 ||||| ||||| |||||||||||||| || || |||||||| |||| Sbjct: 2304 caagtggatagcgctgctgtgttccacaacgccagcacaagattct 2349
>gb|AY150430.1| Arabidopsis thaliana delta-1-pyrroline 5-carboxylase synthetase (P5C1) (At2g39800) mRNA, complete cds Length = 2185 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttct 205 ||||| ||||| |||||||||||||| || || |||||||| |||| Sbjct: 1924 caagtggatagcgctgctgtgttccacaacgccagcacaagattct 1969
>emb|X98421.1|MSP5CS1 M.sativa mRNA for delta-1-pyrroline-5-carboxylate synthase, P5CS-1 Length = 2603 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 82 catataaatcgttatggaagtgcaca 107 |||||||||| ||||||||||||||| Sbjct: 2011 catataaatctttatggaagtgcaca 2036
>emb|X87330.1|ATP5COSMR A.thaliana mRNA for pyrroline-5-carboxylate synthetase Length = 2584 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttct 205 ||||| ||||| |||||||||||||| || || |||||||| |||| Sbjct: 2022 caagtggatagcgctgctgtgttccacaacgccagcacaagattct 2067
>emb|X86777.1|ATP5CSAGN A.thaliana mRNA for pyrroline-5-carboxylate synthetase A Length = 2552 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttct 205 ||||| ||||| |||||||||||||| || || |||||||| |||| Sbjct: 1996 caagtggatagcgctgctgtgttccacaacgccagcacaagattct 2041
>gb|AY080771.1| Arabidopsis thaliana putative delta-1-pyrroline 5-carboxylase synthetase P5C1 (At2g39800) mRNA, complete cds Length = 2600 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttct 205 ||||| ||||| |||||||||||||| || || |||||||| |||| Sbjct: 2043 caagtggatagcgctgctgtgttccacaacgccagcacaagattct 2088
>gb|AY113046.1| Arabidopsis thaliana At2g39800/T5I7.10 mRNA, complete cds Length = 2154 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttct 205 ||||| ||||| |||||||||||||| || || |||||||| |||| Sbjct: 1924 caagtggatagcgctgctgtgttccacaacgccagcacaagattct 1969
>gb|AF424633.1|AF424633 Arabidopsis thaliana At2g39800/T5I7.10 mRNA, complete cds Length = 2630 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttct 205 ||||| ||||| |||||||||||||| || || |||||||| |||| Sbjct: 2043 caagtggatagcgctgctgtgttccacaacgccagcacaagattct 2088
>emb|BX821655.1|CNS0AAA7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL61ZD08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 963 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttct 205 ||||| ||||| |||||||||||||| || || |||||||| |||| Sbjct: 489 caagtggatagcgctgctgtgttccacaacgccagcacaagattct 534
>emb|BX821384.1|CNS0AAEL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZA05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 469 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttct 205 ||||| ||||| |||||||||||||| || || |||||||| |||| Sbjct: 31 caagtggatagcgctgctgtgttccacaacgccagcacaagattct 76
>dbj|D32138.1|ATHATP5CS Arabidopsis thaliana mRNA for delta1-pyrroline-5-carboxylate synthase, complete cds Length = 2571 Score = 44.1 bits (22), Expect = 0.55 Identities = 40/46 (86%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttct 205 ||||| ||||| |||||||||||||| || || |||||||| |||| Sbjct: 2030 caagtggatagcgctgctgtgttccacaacgccagcacaagattct 2075
>gb|M92276.1|VIRPYRR Vigna aconitifolia pyrroline-5-carboxylate synthetase associated mRNA sequence Length = 2417 Score = 44.1 bits (22), Expect = 0.55 Identities = 46/54 (85%) Strand = Plus / Plus Query: 160 caagttgatagtgctgctgtgttccataatgcaagcacaaggttctgtgatggg 213 ||||| || ||||||||||| || || ||||||||||| || ||| |||||||| Sbjct: 1963 caagtagacagtgctgctgtttttcacaatgcaagcaccagattcagtgatggg 2016 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 71 cagcaattgaccatataaatcgttatggaagtgcaca 107 |||| ||||| |||||||||| |||||||||||||| Sbjct: 1874 cagctattgatcatataaatctgtatggaagtgcaca 1910
>gb|AC110209.11| Mus musculus chromosome 12, clone RP23-279O18, complete sequence Length = 177587 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 atttgttgatgatatacagtc 71 ||||||||||||||||||||| Sbjct: 85948 atttgttgatgatatacagtc 85928
>gb|AC146613.3| Mus musculus BAC clone RP23-36P1 from chromosome 18, complete sequence Length = 197939 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 367 aaggatcttcctttgcaatga 387 ||||||||||||||||||||| Sbjct: 66403 aaggatcttcctttgcaatga 66423
>gb|AC137693.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1111_B01, complete sequence Length = 136068 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 agattgtattatcacaaccga 131 ||||||||||||||||||||| Sbjct: 63700 agattgtattatcacaaccga 63680
>emb|AL158824.11| Human DNA sequence from clone RP11-165N19 on chromosome 9 Contains a ribosomal protein L29 (RPL29) pseudogene, the 3' end of the gene for regulator of differentiation 1 (ROD1), a novel gene containing DKFZP761E1824, a heat shock 10 KDa protein 1 (HSPE1) pseudogene and a CpG island, complete sequence Length = 147345 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 tttgttgatgatatacagtca 72 ||||||||||||||||||||| Sbjct: 68987 tttgttgatgatatacagtca 68967
>ref|XM_701764.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 7 (LOC557186), mRNA Length = 3262 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 226 ctaggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgt 278 |||||||| ||||||||||| ||||| | || || ||||||||||| ||||| Sbjct: 2279 ctaggtgcggaggttggcatcagcactgcccgtattcatgcccgtggtcctgt 2331
>ref|XM_701763.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 6 (LOC557186), mRNA Length = 3234 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 226 ctaggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgt 278 |||||||| ||||||||||| ||||| | || || ||||||||||| ||||| Sbjct: 2251 ctaggtgcggaggttggcatcagcactgcccgtattcatgcccgtggtcctgt 2303
>ref|XM_701762.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 5 (LOC557186), mRNA Length = 3262 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 226 ctaggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgt 278 |||||||| ||||||||||| ||||| | || || ||||||||||| ||||| Sbjct: 2279 ctaggtgcggaggttggcatcagcactgcccgtattcatgcccgtggtcctgt 2331
>ref|XM_701761.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 4 (LOC557186), mRNA Length = 3258 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 226 ctaggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgt 278 |||||||| ||||||||||| ||||| | || || ||||||||||| ||||| Sbjct: 2275 ctaggtgcggaggttggcatcagcactgcccgtattcatgcccgtggtcctgt 2327
>ref|XM_701760.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 3 (LOC557186), mRNA Length = 3271 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 226 ctaggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgt 278 |||||||| ||||||||||| ||||| | || || ||||||||||| ||||| Sbjct: 2288 ctaggtgcggaggttggcatcagcactgcccgtattcatgcccgtggtcctgt 2340
>ref|XM_701759.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 2 (LOC557186), mRNA Length = 3274 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 226 ctaggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgt 278 |||||||| ||||||||||| ||||| | || || ||||||||||| ||||| Sbjct: 2291 ctaggtgcggaggttggcatcagcactgcccgtattcatgcccgtggtcctgt 2343
>ref|XM_677993.1| PREDICTED: Danio rerio similar to pyrroline-5-carboxylate synthetase isoform 1, transcript variant 1 (LOC557186), mRNA Length = 3289 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 226 ctaggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgt 278 |||||||| ||||||||||| ||||| | || || ||||||||||| ||||| Sbjct: 2306 ctaggtgcggaggttggcatcagcactgcccgtattcatgcccgtggtcctgt 2358
>emb|BX510312.7| Zebrafish DNA sequence from clone CH211-240B21 in linkage group 5, complete sequence Length = 177177 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 533 tgtacaatgatttatccatacaatg 557 |||||||||||||||| |||||||| Sbjct: 147790 tgtacaatgatttatcaatacaatg 147766
>gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 agattgtattatcacaaccga 131 ||||||||||||||||||||| Sbjct: 8668 agattgtattatcacaaccga 8648
>gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 agattgtattatcacaaccga 131 ||||||||||||||||||||| Sbjct: 8668 agattgtattatcacaaccga 8648
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 agattgtattatcacaaccga 131 ||||||||||||||||||||| Sbjct: 20427539 agattgtattatcacaaccga 20427559
>gb|AC154226.3| Mus musculus BAC clone RP24-353J14 from chromosome 13, complete sequence Length = 196991 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 49 gaatttgttgatgatatacagtcagcaat 77 ||||||||||||||| ||||||| ||||| Sbjct: 24231 gaatttgttgatgatttacagtctgcaat 24259
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 agattgtattatcacaaccga 131 ||||||||||||||||||||| Sbjct: 20737773 agattgtattatcacaaccga 20737793
>emb|CT010497.9| Mouse DNA sequence from clone RP23-239L12 on chromosome 12, complete sequence Length = 189472 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 atttgttgatgatatacagtc 71 ||||||||||||||||||||| Sbjct: 43025 atttgttgatgatatacagtc 43005
>gb|AC154355.1| Mus musculus BAC clone RP23-220N4 from 13, complete sequence Length = 168447 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 49 gaatttgttgatgatatacagtcagcaat 77 ||||||||||||||| ||||||| ||||| Sbjct: 67596 gaatttgttgatgatttacagtctgcaat 67624
>emb|CT010470.9| Mouse DNA sequence from clone RP23-313D12 on chromosome 13, complete sequence Length = 199355 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 49 gaatttgttgatgatatacagtcagcaat 77 ||||||||||||||| ||||||| ||||| Sbjct: 126052 gaatttgttgatgatttacagtctgcaat 126080
>gb|AC166111.4| Mus musculus BAC clone RP23-68O7 from chromosome 1, complete sequence Length = 185692 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtgctgctgtgttccataat 189 |||||||||||||||||||| Sbjct: 155420 gtgctgctgtgttccataat 155439
>ref|XM_524439.1| PREDICTED: Pan troglodytes similar to cAMP-specific 3,5-cyclic phosphodiesterase 4A (DPDE2) (PDE46) (LOC469054), mRNA Length = 567 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 350 ctcttcaaagcccccttctc 369
>gb|AF069491.1|HSPDE4A5 Homo sapiens cAMP specific phosphodiesterase 4A variant pde46 (PDE4A) gene, exon 15 and 15a and alternative splice products, complete cds Length = 3908 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 1362 ctcttcaaagcccccttctc 1381
>gb|AC091473.2| Mus musculus chromosome X clones RP21-114F21, RP21-430D6 complete sequence Length = 221860 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 aagaaagacaggagaacgtt 489 |||||||||||||||||||| Sbjct: 173666 aagaaagacaggagaacgtt 173647
>gb|AF241726.3| Homo sapiens chromosome X, clones RP5-819E23 and RP1-137P19, Map p11.4, complete sequences Length = 244978 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 atggaagtgcacacacagat 114 |||||||||||||||||||| Sbjct: 20611 atggaagtgcacacacagat 20592
>gb|BC019864.1| Homo sapiens phosphodiesterase 4A, cAMP-specific (phosphodiesterase E2 dunce homolog, Drosophila), mRNA (cDNA clone MGC:30168 IMAGE:4942336), complete cds Length = 2429 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 1911 ctcttcaaagcccccttctc 1930
>ref|XM_455582.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F11022g predicted mRNA Length = 2667 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 cacaaggatcttcctttgcaatga 387 |||||| ||||||||||||||||| Sbjct: 2521 cacaagaatcttcctttgcaatga 2498
>gb|AY593872.1| Homo sapiens cAMP-specific phosphodiesterase (PDE4A) mRNA, complete cds Length = 2707 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 2462 ctcttcaaagcccccttctc 2481
>gb|AE004177.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 85 of 251 of the complete chromosome Length = 21916 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 taatgcaagcacaaggttct 205 |||||||||||||||||||| Sbjct: 1170 taatgcaagcacaaggttct 1189
>gb|AC166996.1| Mus musculus BAC clone RP23-268E1 from chromosome 12, complete sequence Length = 162710 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttgttgatgatatacagtca 72 |||||||||||||||||||| Sbjct: 33147 ttgttgatgatatacagtca 33128
>emb|AL157766.9| Human DNA sequence from clone RP11-40O20 on chromosome 13q12.11-12.2 Contains the 3' end of the SGCG gene for sarcoglycan gamma (35kD dystrophin-associated glycoprotein), the SACS gene for spastic ataxia of Charlevoix-Saguenay (sacsin), a ribosomal protein large P1 (RPLP1) pseudogene and a CpG island, complete sequence Length = 92693 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 agggtagaggattcttgctg 406 |||||||||||||||||||| Sbjct: 71561 agggtagaggattcttgctg 71542
>emb|AL096699.11|HS1145L23 Human DNA sequence from clone RP5-1145L23 on chromosome Xp21.1-21.3 Contains part of the DMD gene for dystrophin (muscular dystrophy, Duchenne and Becker types) and a novel gene, complete sequence Length = 203006 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 aagaagtcagcagatacttt 152 |||||||||||||||||||| Sbjct: 63081 aagaagtcagcagatacttt 63100
>emb|BX537139.17| Zebrafish DNA sequence from clone DKEY-46K9 in linkage group 9, complete sequence Length = 243063 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 atttgttgatgatatacagtcagc 74 |||||||| ||||||||||||||| Sbjct: 15188 atttgttggtgatatacagtcagc 15211
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 cacaaggatcttcctttgcaatga 387 |||||| ||||||||||||||||| Sbjct: 1016360 cacaagaatcttcctttgcaatga 1016383
>emb|CR378665.1| Photobacterium profundum SS9; segment 3/12 Length = 347213 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 ctcgaatttgttgatgatat 65 |||||||||||||||||||| Sbjct: 136732 ctcgaatttgttgatgatat 136751
>emb|BX571866.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 8/17 Length = 349652 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 tgtacaatgatttatccata 552 |||||||||||||||||||| Sbjct: 315353 tgtacaatgatttatccata 315372
>emb|AL672262.11| Mouse DNA sequence from clone RP23-318G8 on chromosome 11, complete sequence Length = 101598 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gtagattcatttcatcatga 23 |||||||||||||||||||| Sbjct: 64088 gtagattcatttcatcatga 64107
>gb|AC011461.5| Homo sapiens chromosome 19 clone CTC-429L19, complete sequence Length = 100680 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 11314 ctcttcaaagcccccttctc 11333
>ref|NM_031179.1| Mus musculus splicing factor 3b, subunit 1 (Sf3b1), mRNA Length = 6232 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtgctgctgtgttccataat 189 |||||||||||||||||||| Sbjct: 4486 gtgctgctgtgttccataat 4467
>ref|NM_006202.1| Homo sapiens phosphodiesterase 4A, cAMP-specific (phosphodiesterase E2 dunce homolog, Drosophila) (PDE4A), mRNA Length = 4255 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 2030 ctcttcaaagcccccttctc 2049
>gb|AF073745.2|AF073745 Homo sapiens cyclic AMP-specific phosphodiesterase HSPDE4A10 (PDE4A) mRNA, complete cds Length = 2478 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 2261 ctcttcaaagcccccttctc 2280
>gb|S75213.1| type-IVA cyclic AMP specific phosphodiesterase HPDE4A [human, T-cells, mRNA Partial, 2319 nt] Length = 2319 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 1788 ctcttcaaagcccccttctc 1807
>dbj|AK077993.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030498N11 product:splicing factor 3b, subunit 1, 155 kDa, full insert sequence Length = 2233 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtgctgctgtgttccataat 189 |||||||||||||||||||| Sbjct: 493 gtgctgctgtgttccataat 474
>dbj|AK048521.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130069B05 product:splicing factor 3b, subunit 1, 155 kDa, full insert sequence Length = 3352 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtgctgctgtgttccataat 189 |||||||||||||||||||| Sbjct: 1624 gtgctgctgtgttccataat 1605
>gb|AC149412.2| Phakopsora pachyrhizi clone JGIAFNA-69I18, complete sequence Length = 37632 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 ttgcaatgagggtagaggat 398 |||||||||||||||||||| Sbjct: 25399 ttgcaatgagggtagaggat 25380
>gb|AY618547.1| Homo sapiens cyclic AMP phosphodiesterase PDE4A11 (PDE4A) mRNA, partial cds, alternatively spliced Length = 2583 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 2366 ctcttcaaagcccccttctc 2385
>gb|L20967.1|HUMPDEC Homo sapiens phosphodiesterase gene, partial cds Length = 3131 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 2444 ctcttcaaagcccccttctc 2463
>gb|AC074367.6| Homo sapiens BAC clone RP11-261A24 from 2, complete sequence Length = 102105 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 579 ttgtaactgtagaattgcat 598 |||||||||||||||||||| Sbjct: 50360 ttgtaactgtagaattgcat 50379
>gb|AC092969.7| Homo sapiens 3 BAC RP11-561L3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180773 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 atgaagaaagacaggagaac 486 |||||||||||||||||||| Sbjct: 91191 atgaagaaagacaggagaac 91210
>gb|AC108391.14| Mus musculus chromosome 1, clone RP23-16N14, complete sequence Length = 257730 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gtgctgctgtgttccataat 189 |||||||||||||||||||| Sbjct: 109473 gtgctgctgtgttccataat 109492
>gb|AC175366.1| Pan troglodytes chromosome X clone CH251-499L9 map human ortholog p11.4, complete sequence Length = 217335 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 atggaagtgcacacacagat 114 |||||||||||||||||||| Sbjct: 74019 atggaagtgcacacacagat 74000
>gb|U68532.1|HSU68532 Homo sapiens cyclic AMP specific phosphodiesterase RD1 (PDE4a) mRNA, complete cds Length = 1963 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 1735 ctcttcaaagcccccttctc 1754
>gb|U60822.1|HSU60822 Human dystrophin (DMD) gene, exons 7, 8 and 9, and partial cds Length = 112359 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 aagaagtcagcagatacttt 152 |||||||||||||||||||| Sbjct: 81635 aagaagtcagcagatacttt 81616
>gb|U18087.1|HSU18087 Human 3',5'-cyclic AMP phosphodiesterase HPDE4A6 mRNA, complete cds Length = 2091 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 1853 ctcttcaaagcccccttctc 1872
>gb|U97584.1|HSU97584 Homo sapiens cyclic AMP-specific phosphodiesterase HSPDE4A1A (PDE4A) mRNA, complete cds Length = 1965 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 1748 ctcttcaaagcccccttctc 1767
>gb|BC038234.1| Homo sapiens phosphodiesterase 4A, cAMP-specific (phosphodiesterase E2 dunce homolog, Drosophila), mRNA (cDNA clone MGC:46146 IMAGE:5732341), complete cds Length = 2635 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 2052 ctcttcaaagcccccttctc 2071
>emb|CT476827.2| Pan troglodytes chromosome X BAC RP43-033L16, complete sequence Length = 165984 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 aagaagtcagcagatacttt 152 |||||||||||||||||||| Sbjct: 96219 aagaagtcagcagatacttt 96238
>emb|CR354534.15| Zebrafish DNA sequence from clone CH211-140C18 in linkage group 23, complete sequence Length = 189794 Score = 40.1 bits (20), Expect = 8.6 Identities = 44/52 (84%) Strand = Plus / Minus Query: 227 taggtgcagaggttggcataagcacagggcgcatacatgcccgtggacctgt 278 ||||||| ||||||||||| ||||| | || || ||||||||||| ||||| Sbjct: 7046 taggtgcggaggttggcatcagcactgcccgtattcatgcccgtggtcctgt 6995
>gb|M37744.1|HUMPDEAA Human cyclic AMP (cAMP)-specific phosphodiesterase mRNA, complete cds Length = 2619 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 2112 ctcttcaaagcccccttctc 2131
>emb|AL807376.4| Mouse DNA sequence from clone RP23-436K3 on chromosome X, complete sequence Length = 203189 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 aagaaagacaggagaacgtt 489 |||||||||||||||||||| Sbjct: 34999 aagaaagacaggagaacgtt 34980
>dbj|AB037890.1| Mus musculus Sf3b1 mRNA for pre-mRNA splicing factor SF3b 155 kDa subunit, complete cds Length = 6232 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 gtgctgctgtgttccataat 189 |||||||||||||||||||| Sbjct: 4486 gtgctgctgtgttccataat 4467
>gb|L20965.1|HUMPDEA Human phosphodiesterase mRNA, complete cds Length = 3705 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctcttcaaagcccccttctc 454 |||||||||||||||||||| Sbjct: 2559 ctcttcaaagcccccttctc 2578 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,185,013 Number of Sequences: 3902068 Number of extensions: 5185013 Number of successful extensions: 108707 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 108340 Number of HSP's gapped (non-prelim): 350 length of query: 631 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 608 effective length of database: 17,143,297,704 effective search space: 10423125004032 effective search space used: 10423125004032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
