| Clone Name | baal40b02 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X76642.1|LLGRPEDK L.lactis MG1363 grpE and dnaK genes Length = 5915 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 153 tctttgatgatttattcaaa 172 |||||||||||||||||||| Sbjct: 905 tctttgatgatttattcaaa 924
>emb|BX530059.4| Zebrafish DNA sequence from clone DKEYP-111B3 in linkage group 21, complete sequence Length = 179045 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 atgatttattcaaaaacaga 178 |||||||||||||||||||| Sbjct: 50512 atgatttattcaaaaacaga 50531
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tgacgagggtcaaacctgtc 38 |||||||||||||||||||| Sbjct: 8702439 tgacgagggtcaaacctgtc 8702458
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tgacgagggtcaaacctgtc 38 |||||||||||||||||||| Sbjct: 8702322 tgacgagggtcaaacctgtc 8702341
>emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa0036A15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 195500 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 tgacgagggtcaaacctgtc 38 |||||||||||||||||||| Sbjct: 139730 tgacgagggtcaaacctgtc 139711
>gb|AF016443.1| Caenorhabditis elegans cosmid C17E7, complete sequence Length = 43254 Score = 38.2 bits (19), Expect = 9.2 Identities = 21/22 (95%) Strand = Plus / Plus Query: 164 ttattcaaaaacaganctttga 185 ||||||||||||||| |||||| Sbjct: 699 ttattcaaaaacagatctttga 720
>emb|AL022394.3|HS511B24 Human DNA sequence from clone RP3-511B24 on chromosome 20q11.2-12 Contains the 3' end of the TOP1 gene for topoisomerase (DNA) I, the PLCG1 gene for phospholipase C gamma 1, the 3' end of the TIX1 gene for triple homeobox 1, a ribosomal protein L23 (RPL23) pseudogene, a novel gene, the 5' end of a novel gene and a CpG island, complete sequence Length = 146547 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 109 acatggtcctttttgtgaa 127 ||||||||||||||||||| Sbjct: 140202 acatggtcctttttgtgaa 140184
>gb|AC146862.24| Medicago truncatula clone mth2-174p12, complete sequence Length = 114731 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 156 ttgatgatttattcaaaaa 174 ||||||||||||||||||| Sbjct: 7044 ttgatgatttattcaaaaa 7062
>gb|AC174352.7| Medicago truncatula clone mth2-7o1, complete sequence Length = 121626 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 156 ttgatgatttattcaaaaa 174 ||||||||||||||||||| Sbjct: 41484 ttgatgatttattcaaaaa 41466
>emb|BX537314.17| Zebrafish DNA sequence from clone CH211-120E1 in linkage group 19, complete sequence Length = 168538 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 159 atgatttattcaaaaacag 177 ||||||||||||||||||| Sbjct: 38313 atgatttattcaaaaacag 38331
>gb|AC013640.7| Homo sapiens chromosome 15, clone RP11-16L14, complete sequence Length = 149555 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 155 tttgatgatttattcaaaa 173 ||||||||||||||||||| Sbjct: 47477 tttgatgatttattcaaaa 47495
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 158 gatgatttattcaaaaaca 176 ||||||||||||||||||| Sbjct: 17140843 gatgatttattcaaaaaca 17140861
>gb|AE004464.1| Pseudomonas aeruginosa PAO1, section 25 of 529 of the complete genome Length = 11680 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 gcgcaagtacatggtcctt 119 ||||||||||||||||||| Sbjct: 3251 gcgcaagtacatggtcctt 3233
>gb|AC136289.2| Homo sapiens chromosome 3 clone RP11-584G1, complete sequence Length = 191776 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 155 tttgatgatttattcaaaa 173 ||||||||||||||||||| Sbjct: 78529 tttgatgatttattcaaaa 78511
>emb|BX323007.11| Zebrafish DNA sequence from clone CH211-262K23 in linkage group 19, complete sequence Length = 130807 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 159 atgatttattcaaaaacag 177 ||||||||||||||||||| Sbjct: 32277 atgatttattcaaaaacag 32295
>gb|AC007429.11|AC007429 Homo sapiens, clone hRPK.70_A_1, complete sequence Length = 160025 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 155 tttgatgatttattcaaaa 173 ||||||||||||||||||| Sbjct: 25607 tttgatgatttattcaaaa 25625
>emb|AL662956.3|OSJN00159 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018J19, complete sequence Length = 169559 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 158 gatgatttattcaaaaaca 176 ||||||||||||||||||| Sbjct: 85140 gatgatttattcaaaaaca 85158
>emb|AJ288335.1|RRU288335 Rhytidium rugosum internal transcribed spacer 1 (ITS1), clone 002 Length = 340 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 121 ttgtgaaagcgtaatccga 139 ||||||||||||||||||| Sbjct: 257 ttgtgaaagcgtaatccga 275
>emb|AJ288334.1|RRU288334 Rhytidium rugosum internal transcribed spacer 1 (ITS1), clone 001 Length = 340 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 121 ttgtgaaagcgtaatccga 139 ||||||||||||||||||| Sbjct: 257 ttgtgaaagcgtaatccga 275 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,021,731 Number of Sequences: 3902068 Number of extensions: 1021731 Number of successful extensions: 74488 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74385 Number of HSP's gapped (non-prelim): 103 length of query: 187 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 165 effective length of database: 17,147,199,772 effective search space: 2829287962380 effective search space used: 2829287962380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)