Clone Name	baal40a19
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triumph M...	674	0.0
2	gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Kompolti ...	674	0.0
3	gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure MADS...	674	0.0
4	gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri MADS...	674	0.0
5	gb|AY785832.1| Hordeum vulgare subsp. spontaneum cultivar OSU11 ...	674	0.0
6	gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Tremois M...	674	0.0
7	gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Strider M...	674	0.0
8	gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo M...	674	0.0
9	gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 M...	674	0.0
10	gb|AY758238.1| Hordeum vulgare cultivar Dairokkaku BM5a mRNA, co...	674	0.0
11	gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triumph B...	674	0.0
12	gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, com...	674	0.0
13	gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harringto...	666	0.0
14	gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar Morex MAD...	666	0.0
15	gb|AY758237.1| Hordeum vulgare cultivar Golden Promise BM5a mRNA...	666	0.0
16	gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri BM5a...	666	0.0
17	gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5...	666	0.0
18	gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC...	666	0.0
19	gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN...	666	0.0
20	gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar Morex MAD...	662	0.0
21	emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box prote...	658	0.0
22	gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5...	537	e-150
23	gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 V...	537	e-150
24	gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
25	gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
26	gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
27	gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
28	gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
29	gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
30	gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
31	gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
32	gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
33	gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
34	gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
35	gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
36	gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
37	gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	458	e-126
38	gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	450	e-123
39	gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	450	e-123
40	gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	450	e-123
41	gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	450	e-123
42	gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI...	450	e-123
43	gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN...	371	1e-99
44	gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN...	371	1e-99
45	gb|AY747599.1| Triticum aestivum cultivar IL369 line VRN-A1 (VRN...	371	1e-99
46	gb|AY747598.1| Triticum turgidum cultivar Langdon clone BAC 1256...	371	1e-99
47	gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) g...	369	4e-99
48	gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) g...	369	4e-99
49	gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) g...	369	4e-99
50	gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A1...	369	4e-99
51	emb|AJ577374.1|TAE577374 Triticum aestivum partial mRNA for puta...	363	3e-97
52	gb|AY280870.1| Triticum aestivum MADS-box protein TaVRT-1 mRNA, ...	339	4e-90
53	gb|AY747604.1| Triticum aestivum cultivar Triple Dirk C line VRN...	339	4e-90
54	gb|AY747603.1| Triticum aestivum cultivar Triple Dirk B line VRN...	339	4e-90
55	gb|AY747602.1| Triticum turgidum cultivar Langdon clone BAC 1225...	339	4e-90
56	gb|AY747606.1| Triticum aestivum cultivar Triple Dirk C line VRN...	315	5e-83
57	gb|AY747605.1| Aegilops tauschii BAC 22J2 VRN-D1 (VRN-D1) gene, ...	315	5e-83
58	gb|AY747597.1| Triticum aestivum cultivar Triple Dirk E line VRN...	315	5e-83
59	dbj|AB007504.1| Triticum aestivum TaMADS#11 mRNA for MADS box tr...	315	5e-83
60	gb|AY466447.1| Triticum turgidum subsp. durum clone BAC 1225D16 ...	107	2e-20
61	gb|AY466446.1| Aegilops tauschii clone BAC 22J2 VRN-D1 gene, par...	107	2e-20
62	gb|AY466448.1| Triticum turgidum subsp. durum clone BAC 1256C17 ...	100	6e-18
63	gb|AY198326.1| Lolium perenne MADS1 mRNA, complete cds	54	3e-04
64	gb|AY395715.1| Dendrocalamus latiflorus MADS-box protein (Mads2)...	50	0.005
65	gb|AY395714.1| Dendrocalamus latiflorus MADS-box protein (Mads1)...	50	0.005
66	gb|AF035378.1|AF035378 Lolium temulentum MADS-box protein 1 (MAD...	46	0.079
67	gb|AC103358.7| Mus musculus chromosome 19, clone RP24-358I11, co...	44	0.31
68	emb|AL161452.19| Human DNA sequence from clone RP11-426A6 on chr...	44	0.31
69	gb|AC157907.2| Mus musculus chromosome 19, clone RP23-79H21, com...	44	0.31
70	gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Canc...	42	1.2
71	ref|XM_469789.1| Oryza sativa (japonica cultivar-group), mRNA	42	1.2
72	gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome...	42	1.2
73	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	42	1.2
74	gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-box p...	42	1.2
75	gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genom...	42	1.2
76	emb|AL512663.4| Human DNA sequence from clone RP11-356H7 on chro...	42	1.2
77	gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS box p...	42	1.2
78	gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic ...	42	1.2
79	gb|AC158678.6| Mus musculus 6 BAC RP23-142I6 (Roswell Park Cance...	42	1.2
80	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.2
81	gb|AF139664.2|AF139664 Oryza sativa FDRMADS6 mRNA, complete cds	42	1.2
82	gb|AC012485.13| Homo sapiens BAC clone RP11-5O24 from 2, complet...	42	1.2
83	gb|AF058697.1|AF058697 Oryza sativa MADS14 protein mRNA, complet...	42	1.2
84	emb|AL929212.8| Mouse DNA sequence from clone RP23-65G6 on chrom...	42	1.2
85	gb|AC153867.3| Mus musculus 6 BAC RP23-400K22 (Roswell Park Canc...	42	1.2
86	dbj|AB041020.1| Oryza sativa RAP1B mRNA for AP1-like MADS box pr...	42	1.2
87	gb|AC183300.4| Pan troglodytes BAC clone CH251-263P14 from chrom...	40	4.9
88	gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosom...	40	4.9
89	gb|AC117118.4| Rattus norvegicus 1 BAC CH230-161O8 (Children's H...	40	4.9
90	gb|AC125109.3| Mus musculus BAC clone RP24-232H5 from chromosome...	40	4.9
91	gb|AC125074.3| Mus musculus BAC clone RP23-464N18 from chromosom...	40	4.9
92	gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome	40	4.9
93	emb|AL365260.11| Human DNA sequence from clone RP11-433J22 on ch...	40	4.9
94	emb|AL139320.18| Human DNA sequence from clone RP11-154C3 on chr...	40	4.9
95	emb|AL662783.13| Mouse DNA sequence from clone RP23-378N18 on ch...	40	4.9
96	gb|AC015813.12| Homo sapiens, clone RP11-159D12, complete sequence	40	4.9
97	gb|AC154575.2| Mus musculus BAC clone RP23-248E1 from chromosome...	40	4.9
98	gb|AC182643.2| Pan troglodytes BAC clone CH251-219K6 from chromo...	40	4.9
99	gb|AC093890.3| Homo sapiens BAC clone RP11-673E1 from 4, complet...	40	4.9
100	gb|AC104090.3| Homo sapiens BAC clone RP11-780M14 from 4, comple...	40	4.9
101	gb|AC177797.3| Mus musculus BAC clone RP24-558G11 from chromosom...	40	4.9
102	gb|AC048387.16| Homo sapiens chromosome 8, clone RP11-465K16, co...	40	4.9
103	gb|AC004757.2| Homo sapiens chromosome 17, clone CTB-117K16, com...	40	4.9
104	gb|AC131790.4| Mus musculus BAC clone RP24-447L18 from 3, comple...	40	4.9
105	emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chro...	40	4.9

---

>gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triumph MADS-box protein
            HvBM5A (BM5A) mRNA, complete cds
          Length = 1105

 Score =  674 bits (340), Expect = 0.0
 Identities = 347/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 740  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 798

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 858

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 918

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 978

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1038

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1086

---

>gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai MADS-box
            protein HvBM5A (BM5A) mRNA, complete cds
          Length = 1113

 Score =  674 bits (340), Expect = 0.0
 Identities = 347/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 748  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 806

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 866

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 926

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 986

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1046

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1094

---

>gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure MADS-box protein HvBM5A
            (BM5A) mRNA, complete cds
          Length = 1113

 Score =  674 bits (340), Expect = 0.0
 Identities = 347/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 748  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 806

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 866

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 926

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 986

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1046

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1094

---

>gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri MADS-box protein HvBM5A
            (BM5A) mRNA, complete cds
          Length = 1113

 Score =  674 bits (340), Expect = 0.0
 Identities = 347/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 748  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 806

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 866

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 926

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 986

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1046

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1094

---

>gb|AY785832.1| Hordeum vulgare subsp. spontaneum cultivar OSU11 Caesarea 26-24
            MADS-box protein HvBM5A (BM5A) mRNA, complete cds
          Length = 1117

 Score =  674 bits (340), Expect = 0.0
 Identities = 347/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 752  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 810

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 870

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 930

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 990

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1050

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1098

---

>gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Tremois MADS-box protein
            HvBM5A (BM5A) mRNA, complete cds
          Length = 1113

 Score =  674 bits (340), Expect = 0.0
 Identities = 347/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 748  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 806

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 866

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 926

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 986

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1046

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1094

---

>gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Strider MADS-box protein
            HvBM5A (BM5A) mRNA, complete cds
          Length = 1113

 Score =  674 bits (340), Expect = 0.0
 Identities = 347/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 748  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 806

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 866

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 926

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 986

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1046

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1094

---

>gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo MADS-box protein
            HvBM5A (BM5A) mRNA, complete cds
          Length = 1113

 Score =  674 bits (340), Expect = 0.0
 Identities = 347/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 748  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 806

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 866

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 926

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 986

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1046

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1094

---

>gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab536 MADS-box protein
            HvBM5A (BM5A) mRNA, complete cds
          Length = 1113

 Score =  674 bits (340), Expect = 0.0
 Identities = 347/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 748  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 806

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 866

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 926

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 986

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1046

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1094

---

>gb|AY758238.1| Hordeum vulgare cultivar Dairokkaku BM5a mRNA, complete cds
          Length = 1153

 Score =  674 bits (340), Expect = 0.0
 Identities = 347/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 781  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 839

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 899

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 959

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 1019

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1079

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1127

---

>gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triumph BM5a mRNA, complete
            cds
          Length = 1145

 Score =  674 bits (340), Expect = 0.0
 Identities = 347/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 773  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 831

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 891

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 951

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 1011

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1071

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1119

---

>gb|AY750993.1| Hordeum vulgare cultivar Strider VRN-H1 gene, complete cds; and
             transposon MITE-like and retrotransposon Lolaog, complete
             sequence
          Length = 17220

 Score =  674 bits (340), Expect = 0.0
 Identities = 347/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 16830 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 16888

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16889 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 16948

                                                                         
Query: 128   acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16949 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 17008

                                                                         
Query: 188   catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17009 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 17068

                                                                         
Query: 248   tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17069 tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 17128

                                                             
Query: 308   ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
             ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17129 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 17176

---

>gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harrington MADS-box protein
            HvBM5A (BM5A) mRNA, complete cds
          Length = 1117

 Score =  666 bits (336), Expect = 0.0
 Identities = 346/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 752  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 810

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 870

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871  acgagtaacaagttgcagcggccagcctggtgtatcatgcggttgcgaacatgctaaccc 930

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 990

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1050

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1098

---

>gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A
            (BM5A) mRNA, complete cds
          Length = 1117

 Score =  666 bits (336), Expect = 0.0
 Identities = 346/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 752  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 810

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 870

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871  acgagtaacaagttgcagcggccagcctggtgtatcatgcggttgcgaacatgctaaccc 930

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 990

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1050

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1098

---

>gb|AY758237.1| Hordeum vulgare cultivar Golden Promise BM5a mRNA, complete cds
          Length = 1157

 Score =  666 bits (336), Expect = 0.0
 Identities = 346/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 785  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 843

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 903

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904  acgagtaacaagttgcagcggccagcctggtgtatcatgcggttgcgaacatgctaaccc 963

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 1023

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1083

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1131

---

>gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri BM5a mRNA, complete cds
          Length = 1153

 Score =  666 bits (336), Expect = 0.0
 Identities = 346/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 781  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 839

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 899

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 959

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 1019

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1079

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1080 ccatgtaatttatttgtagcatgagtgacgaattttcaactttcgatg 1127

---

>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds
          Length = 12080

 Score =  666 bits (336), Expect = 0.0
 Identities = 346/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 10849 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 10907

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10908 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 10967

                                                                         
Query: 128   acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10968 acgagtaacaagttgcagcggccagcctggtgtatcatgcggttgcgaacatgctaaccc 11027

                                                                         
Query: 188   catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11028 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 11087

                                                                         
Query: 248   tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11088 tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 11147

                                                             
Query: 308   ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
             ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11148 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 11195

---

>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete
             sequence
          Length = 101158

 Score =  666 bits (336), Expect = 0.0
 Identities = 346/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 62570 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 62628

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62629 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 62688

                                                                         
Query: 128   acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62689 acgagtaacaagttgcagcggccagcctggtgtatcatgcggttgcgaacatgctaaccc 62748

                                                                         
Query: 188   catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62749 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 62808

                                                                         
Query: 248   tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62809 tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 62868

                                                             
Query: 308   ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
             ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62869 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 62916

---

>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete cds
          Length = 12360

 Score =  666 bits (336), Expect = 0.0
 Identities = 346/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 11619 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 11677

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11678 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 11737

                                                                         
Query: 128   acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11738 acgagtaacaagttgcagcggccagcctggtgtatcatgcggttgcgaacatgctaaccc 11797

                                                                         
Query: 188   catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11798 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 11857

                                                                         
Query: 248   tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11858 tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 11917

                                                             
Query: 308   ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
             ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11918 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 11965

---

>gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A
            (BM5A) mRNA, complete cds
          Length = 1151

 Score =  662 bits (334), Expect = 0.0
 Identities = 344/346 (99%), Gaps = 1/346 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 785  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 843

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 903

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904  acgagtaacaagttgcagcggccagcctggtgtatcatgcggttgcgaacatgctaaccc 963

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 1023

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1083

                                                          
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcga 353
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcga 1129

---

>emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box protein 5 (m5 gene)
          Length = 1196

 Score =  658 bits (332), Expect = 0.0
 Identities = 345/348 (99%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 791  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 849

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 909

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910  acgagtaacaagttgcagcggccagcctggtgtatcatgcggttgcgaacatgctaaccc 969

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 970  catggaggggagaggaaaagaaatcagagtaaagcagcaagctgcaggaatgtgtatatt 1029

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1030 tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 1089

                                                            
Query: 308  ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 355
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1090 ccatgtaatttatatgtagcatgagtgacgaattttcaactttcgatg 1137

---

>gb|AY758234.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5b gene, partial cds
          Length = 4954

 Score =  537 bits (271), Expect = e-150
 Identities = 299/307 (97%), Gaps = 1/307 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 3486 gagggcagaggatgtggcagtgcagcctcagatcccactccgg-acggcgcttccactgt 3544

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3545 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 3604

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 3605 acgagtaacaagttgcaccggccagactggtgtatcatgcggttgcgaacacgctaaccc 3664

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3665 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcagcaatgtgtatatt 3724

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 3725 tcacttcgtccacttcagtttcctttccacctgggctgagatggctgtacgagtaaatta 3784

                   
Query: 308  ccatgta 314
            |||||||
Sbjct: 3785 ccatgta 3791



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                    
Query: 312  gtaatttatatgtagcatgagtgacgaattttcaactttc 351
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3883 gtaatttatatgtagcatgagtgacgaattttcaactttc 3922

---

>gb|AY887088.1| Hordeum vulgare subsp. vulgare clone BAC 315I20 VRN-H1 (AP1b)
            pseudogene, partial sequence
          Length = 4018

 Score =  537 bits (271), Expect = e-150
 Identities = 299/307 (97%), Gaps = 1/307 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 3534 gagggcagaggatgtggcagtgcagcctcagatcccactccgg-acggcgcttccactgt 3592

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3593 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 3652

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 3653 acgagtaacaagttgcaccggccagactggtgtatcatgcggttgcgaacacgctaaccc 3712

                                                                        
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatatt 247
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3713 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcagcaatgtgtatatt 3772

                                                                        
Query: 248  tcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatcta 307
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 3773 tcacttcgtccacttcagtttcctttccacctgggctgagatggctgtacgagtaaatta 3832

                   
Query: 308  ccatgta 314
            |||||||
Sbjct: 3833 ccatgta 3839



 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                    
Query: 312  gtaatttatatgtagcatgagtgacgaattttcaactttc 351
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 3931 gtaatttatatgtagcatgagtgacgaattttcaactttc 3970

---

>gb|AY896053.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 560559 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1214

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 977  gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1035

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1036 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1095

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1096 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1155

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1156 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1214

---

>gb|AY896052.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 559556 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1023 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1081

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1141

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1201

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1260

---

>gb|AY896048.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420916 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1024 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1082

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1142

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1202

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1261

---

>gb|AY896047.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420913 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1024 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1082

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1142

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1202

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1261

---

>gb|AY896044.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 401370 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1024 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1082

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1142

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1202

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1261

---

>gb|AY896043.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 366446 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1023 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1081

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1141

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1201

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1260

---

>gb|AY896042.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293411 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1023 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1081

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1141

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1201

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1260

---

>gb|AY896041.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293409 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1259

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1022 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1080

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1140

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1200

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1259

---

>gb|AY896040.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 293402 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1023 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1081

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1141

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1201

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1260

---

>gb|AY896039.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 268242 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1024 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1082

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1142

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1202

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1261

---

>gb|AY896038.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 254894 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1261

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1024 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1082

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1142

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1202

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1261

---

>gb|AY896037.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 236388 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1259

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1022 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1080

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1140

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1200

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1259

---

>gb|AY896036.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 220523 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1023 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1081

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1141

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1201

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1260

---

>gb|AY896035.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 212306 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1260

 Score =  458 bits (231), Expect = e-126
 Identities = 238/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1023 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1081

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1141

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1142 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 1201

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1202 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1260

---

>gb|AY896051.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531957 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score =  450 bits (227), Expect = e-123
 Identities = 237/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1025 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1083

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1143

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1144 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacacgctaaccc 1203

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1262

---

>gb|AY896050.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 531853 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score =  450 bits (227), Expect = e-123
 Identities = 237/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1025 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1083

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1143

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1144 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacacgctaaccc 1203

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1262

---

>gb|AY896049.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 466460 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score =  450 bits (227), Expect = e-123
 Identities = 237/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1025 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1083

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1143

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1144 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacacgctaaccc 1203

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1262

---

>gb|AY896046.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 420911 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score =  450 bits (227), Expect = e-123
 Identities = 237/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1025 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1083

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1143

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1144 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacacgctaaccc 1203

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1262

---

>gb|AY896045.1| Hordeum vulgare subsp. spontaneum voucher NPGS PI 406276 MADS box
            transcription factor (Vrn1) gene, partial cds
          Length = 1262

 Score =  450 bits (227), Expect = e-123
 Identities = 237/239 (99%), Gaps = 1/239 (0%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1025 gagggcagaggatgtggcagtgcagcctcaggtcccactccgg-acggcgcttccactgt 1083

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 1143

                                                                        
Query: 128  acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgctaaccc 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1144 acgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacacgctaaccc 1203

                                                                       
Query: 188  catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 246
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 catggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtatat 1262

---

>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene,
             complete cds; and Stowaway MITE and gypsy retrotransposon
             Sukkula, complete sequence
          Length = 12464

 Score =  371 bits (187), Expect = 1e-99
 Identities = 311/347 (89%), Gaps = 4/347 (1%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||| ||
Sbjct: 12068 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccaccgt 12126

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||||||||
Sbjct: 12127 ggatggtgagccacatcaacgggtgaagggcatccagcccatacaggcgtactattcagt 12186

                                                                         
Query: 128   ac-gagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgc-taac 185
             |  | |||||||||||||||||||||||||||||||  ||||||||| | || || | ||
Sbjct: 12187 agagggtaacaagttgcaccggccagcctggtgtatgttgcggttgctagcacgcctgac 12246

                                                                         
Query: 186   cccat-ggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtat 244
             ||| | |||||||| |||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 12247 ccctttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagcgatgtgtat 12306

                                                                         
Query: 245   atttcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaat 304
             ||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||
Sbjct: 12307 atttcactttgtccacctcagtttccctcccagctgggctgagatggctgtacgagtaat 12366

                                                            
Query: 305   ctaccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
              ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 12367 ttaccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 12413

---

>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene,
             complete cds; and Stowaway MITE and gypsy retrotransposon
             Sukkula, complete sequence
          Length = 12233

 Score =  371 bits (187), Expect = 1e-99
 Identities = 311/347 (89%), Gaps = 4/347 (1%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||| ||
Sbjct: 11837 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccaccgt 11895

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||||||||
Sbjct: 11896 ggatggtgagccacatcaacgggtgaagggcatccagcccatacaggcgtactattcagt 11955

                                                                         
Query: 128   ac-gagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgc-taac 185
             |  | |||||||||||||||||||||||||||||||  ||||||||| | || || | ||
Sbjct: 11956 agagggtaacaagttgcaccggccagcctggtgtatgttgcggttgctagcacgcctgac 12015

                                                                         
Query: 186   cccat-ggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtat 244
             ||| | |||||||| |||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 12016 ccctttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagcgatgtgtat 12075

                                                                         
Query: 245   atttcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaat 304
             ||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||
Sbjct: 12076 atttcactttgtccacctcagtttccctcccagctgggctgagatggctgtacgagtaat 12135

                                                            
Query: 305   ctaccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
              ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 12136 ttaccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 12182

---

>gb|AY747599.1| Triticum aestivum cultivar IL369 line VRN-A1 (VRN-A1) gene, complete
            cds; and gypsy retrotransposon Sukkula, complete sequence
          Length = 6730

 Score =  371 bits (187), Expect = 1e-99
 Identities = 311/347 (89%), Gaps = 4/347 (1%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||| ||
Sbjct: 6334 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccaccgt 6392

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||||||||
Sbjct: 6393 ggatggtgagccacatcaacgggtgaagggcatccagcccatacaggcgtactattcagt 6452

                                                                        
Query: 128  ac-gagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgc-taac 185
            |  | |||||||||||||||||||||||||||||||  ||||||||| | || || | ||
Sbjct: 6453 agagggtaacaagttgcaccggccagcctggtgtatgttgcggttgctagcacgcctgac 6512

                                                                        
Query: 186  cccat-ggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtat 244
            ||| | |||||||| |||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 6513 ccctttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagcgatgtgtat 6572

                                                                        
Query: 245  atttcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaat 304
            ||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||
Sbjct: 6573 atttcactttgtccacctcagtttccctcccagctgggctgagatggctgtacgagtaat 6632

                                                           
Query: 305  ctaccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
             ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 6633 ttaccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 6679

---

>gb|AY747598.1| Triticum turgidum cultivar Langdon clone BAC 1256C17 VRN-A1 (VRN-A1)
            gene, complete cds
          Length = 5065

 Score =  371 bits (187), Expect = 1e-99
 Identities = 311/347 (89%), Gaps = 4/347 (1%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||| ||
Sbjct: 4669 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccaccgt 4727

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||||||||
Sbjct: 4728 ggatggtgagccacatcaacgggtgaagggcatccagcccatacaggcgtactattcagt 4787

                                                                        
Query: 128  ac-gagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgc-taac 185
            |  | |||||||||||||||||||||||||||||||  ||||||||| | || || | ||
Sbjct: 4788 agagggtaacaagttgcaccggccagcctggtgtatgttgcggttgctagcacgcctgac 4847

                                                                        
Query: 186  cccat-ggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtat 244
            ||| | |||||||| |||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 4848 ccctttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagcgatgtgtat 4907

                                                                        
Query: 245  atttcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaat 304
            ||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||
Sbjct: 4908 atttcactttgtccacctcagtttccctcccagctgggctgagatggctgtacgagtaat 4967

                                                           
Query: 305  ctaccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
             ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 4968 ttaccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 5014

---

>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds
          Length = 16224

 Score =  369 bits (186), Expect = 4e-99
 Identities = 309/346 (89%), Gaps = 3/346 (0%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||| ||
Sbjct: 15422 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccaccgt 15480

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||||||||
Sbjct: 15481 ggatggtgagccacatcaacgggtgaagggcatccagcccatacaggcgtactattcagt 15540

                                                                         
Query: 128   ac-gagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgc-taac 185
             |  | ||||||||||||||||||||||| |||||||  ||||||||| | || || | ||
Sbjct: 15541 agagggtaacaagttgcaccggccagcccggtgtatgttgcggttgctagcacgcctgac 15600

                                                                         
Query: 186   cccatggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtata 245
             ||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 15601 cccttggagggaaaaggaaaagaaatcagagtaaagtagcaagctgcagcgatgtgtata 15660

                                                                         
Query: 246   tttcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatc 305
             |||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||| 
Sbjct: 15661 tttcacttggtccacctcagtttccctcccagctgggctgagatggctgtacgagtaatt 15720

                                                           
Query: 306   taccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
             ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 15721 taccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 15766

---

>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds
          Length = 15688

 Score =  369 bits (186), Expect = 4e-99
 Identities = 309/346 (89%), Gaps = 3/346 (0%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||| ||
Sbjct: 14886 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccaccgt 14944

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||||||||
Sbjct: 14945 ggatggtgagccacatcaacgggtgaagggcatccagcccatacaggcgtactattcagt 15004

                                                                         
Query: 128   ac-gagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgc-taac 185
             |  | ||||||||||||||||||||||| |||||||  ||||||||| | || || | ||
Sbjct: 15005 agagggtaacaagttgcaccggccagcccggtgtatgttgcggttgctagcacgcctgac 15064

                                                                         
Query: 186   cccatggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtata 245
             ||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 15065 cccttggagggaaaaggaaaagaaatcagagtaaagtagcaagctgcagcgatgtgtata 15124

                                                                         
Query: 246   tttcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatc 305
             |||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||| 
Sbjct: 15125 tttcacttggtccacctcagtttccctcccagctgggctgagatggctgtacgagtaatt 15184

                                                           
Query: 306   taccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
             ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 15185 taccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 15230

---

>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds
          Length = 16209

 Score =  369 bits (186), Expect = 4e-99
 Identities = 309/346 (89%), Gaps = 3/346 (0%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||| ||
Sbjct: 15407 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccaccgt 15465

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||||||||
Sbjct: 15466 ggatggtgagccacatcaacgggtgaagggcatccagcccatacaggcgtactattcagt 15525

                                                                         
Query: 128   ac-gagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgc-taac 185
             |  | ||||||||||||||||||||||| |||||||  ||||||||| | || || | ||
Sbjct: 15526 agagggtaacaagttgcaccggccagcccggtgtatgttgcggttgctagcacgcctgac 15585

                                                                         
Query: 186   cccatggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtata 245
             ||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 15586 cccttggagggaaaaggaaaagaaatcagagtaaagtagcaagctgcagcgatgtgtata 15645

                                                                         
Query: 246   tttcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatc 305
             |||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||| 
Sbjct: 15646 tttcacttggtccacctcagtttccctcccagctgggctgagatggctgtacgagtaatt 15705

                                                           
Query: 306   taccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
             ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 15706 taccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 15751

---

>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence
          Length = 133625

 Score =  369 bits (186), Expect = 4e-99
 Identities = 309/346 (89%), Gaps = 3/346 (0%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||| ||
Sbjct: 81958 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccaccgt 82016

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||||||||
Sbjct: 82017 ggatggtgagccacatcaacgggtgaagggcatccagcccatacaggcgtactattcagt 82076

                                                                         
Query: 128   ac-gagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgc-taac 185
             |  | ||||||||||||||||||||||| |||||||  ||||||||| | || || | ||
Sbjct: 82077 agagggtaacaagttgcaccggccagcccggtgtatgttgcggttgctagcacgcctgac 82136

                                                                         
Query: 186   cccatggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtata 245
             ||| ||||||| | |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 82137 cccttggagggaaaaggaaaagaaatcagagtaaagtagcaagctgcagcgatgtgtata 82196

                                                                         
Query: 246   tttcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaatc 305
             |||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||| 
Sbjct: 82197 tttcacttggtccacctcagtttccctcccagctgggctgagatggctgtacgagtaatt 82256

                                                           
Query: 306   taccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
             ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 82257 taccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 82302

---

>emb|AJ577374.1|TAE577374 Triticum aestivum partial mRNA for putative MADS-box transcription
           factor (mads#11 gene)
          Length = 770

 Score =  363 bits (183), Expect = 3e-97
 Identities = 310/347 (89%), Gaps = 4/347 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
           |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||| ||
Sbjct: 393 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccaccgt 451

                                                                       
Query: 68  ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
           |||||||||||||||||||||| |||||||| ||||||||||  | ||||||||||||||
Sbjct: 452 ggatggtgagccacatcaacgggtgaagggcatccagcccatacaggcgtactattcagt 511

                                                                       
Query: 128 ac-gagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgc-taac 185
           |  | |||||||||||||||||||||||||||||||  ||||||||| | || || | ||
Sbjct: 512 agagggtaacaagttgcaccggccagcctggtgtatgttgcggttgctagcacgcctgac 571

                                                                       
Query: 186 cccat-ggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtat 244
           ||| | |||||||| |||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 572 ccctttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagcgatgtgtat 631

                                                                       
Query: 245 atttcacttcgtccacctcagtttcctttccacctgggctgagatggctgtacgagtaat 304
           ||||| ||| |||||||||||||||| | ||| |||||||||||||||||||||||||||
Sbjct: 632 atttcgctttgtccacctcagtttccctcccagctgggctgagatggctgtacgagtaat 691

                                                          
Query: 305 ctaccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
            ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 692 ttaccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 738

---

>gb|AY280870.1| Triticum aestivum MADS-box protein TaVRT-1 mRNA, complete cds
          Length = 1210

 Score =  339 bits (171), Expect = 4e-90
 Identities = 255/279 (91%), Gaps = 3/279 (1%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||||||
Sbjct: 800  gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccactgt 858

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 859  ggatggttagccacatcaacggctgaagggcttccagcccatataagcgtactattcagt 918

                                                                        
Query: 128  ac-gagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgc-taac 185
            |  |||||||||||||||||||||||||||||||||  ||||||||| | ||||| | ||
Sbjct: 919  agagagtaacaagttgcaccggccagcctggtgtatgttgcggttgctagcatgcctgac 978

                                                                        
Query: 186  cccatggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtata 245
            ||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 979  cccttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagtgatgtgtata 1038

                                                   
Query: 246  tttcacttcgtccacctcagtttcctttccacctgggct 284
            |||||||| |||||||||||||||| | ||| |||||||
Sbjct: 1039 tttcactttgtccacctcagtttccctcccagctgggct 1077



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                          
Query: 306  taccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
            ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 1083 taccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 1128

---

>gb|AY747604.1| Triticum aestivum cultivar Triple Dirk C line VRN-B1 (VRN-B1) gene,
             complete cds
          Length = 13141

 Score =  339 bits (171), Expect = 4e-90
 Identities = 255/279 (91%), Gaps = 3/279 (1%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||||||
Sbjct: 12762 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccactgt 12820

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 12821 ggatggttagccacatcaacggctgaagggcttccagcccatataagcgtactattcagt 12880

                                                                         
Query: 128   ac-gagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgc-taac 185
             |  |||||||||||||||||||||||||||||||||  ||||||||| | ||||| | ||
Sbjct: 12881 agagagtaacaagttgcaccggccagcctggtgtatgttgcggttgctagcatgcctgac 12940

                                                                         
Query: 186   cccatggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtata 245
             ||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 12941 cccttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagtgatgtgtata 13000

                                                    
Query: 246   tttcacttcgtccacctcagtttcctttccacctgggct 284
             |||||||| |||||||||||||||| | ||| |||||||
Sbjct: 13001 tttcactttgtccacctcagtttccctcccagctgggct 13039



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 306   taccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
             ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 13045 taccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 13090

---

>gb|AY747603.1| Triticum aestivum cultivar Triple Dirk B line VRN-B1 (VRN-B1) gene,
            complete cds
          Length = 6297

 Score =  339 bits (171), Expect = 4e-90
 Identities = 255/279 (91%), Gaps = 3/279 (1%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||||||
Sbjct: 5918 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccactgt 5976

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 5977 ggatggttagccacatcaacggctgaagggcttccagcccatataagcgtactattcagt 6036

                                                                        
Query: 128  ac-gagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgc-taac 185
            |  |||||||||||||||||||||||||||||||||  ||||||||| | ||||| | ||
Sbjct: 6037 agagagtaacaagttgcaccggccagcctggtgtatgttgcggttgctagcatgcctgac 6096

                                                                        
Query: 186  cccatggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtata 245
            ||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 6097 cccttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagtgatgtgtata 6156

                                                   
Query: 246  tttcacttcgtccacctcagtttcctttccacctgggct 284
            |||||||| |||||||||||||||| | ||| |||||||
Sbjct: 6157 tttcactttgtccacctcagtttccctcccagctgggct 6195



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                          
Query: 306  taccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
            ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 6201 taccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 6246

---

>gb|AY747602.1| Triticum turgidum cultivar Langdon clone BAC 1225D16 VRN-B1 (VRN-B1)
             gene, complete cds
          Length = 13141

 Score =  339 bits (171), Expect = 4e-90
 Identities = 255/279 (91%), Gaps = 3/279 (1%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||||||
Sbjct: 12762 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccactgt 12820

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 12821 ggatggttagccacatcaacggctgaagggcttccagcccatataagcgtactattcagt 12880

                                                                         
Query: 128   ac-gagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatgc-taac 185
             |  |||||||||||||||||||||||||||||||||  ||||||||| | ||||| | ||
Sbjct: 12881 agagagtaacaagttgcaccggccagcctggtgtatgttgcggttgctagcatgcctgac 12940

                                                                         
Query: 186   cccatggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtata 245
             ||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 12941 cccttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagtgatgtgtata 13000

                                                    
Query: 246   tttcacttcgtccacctcagtttcctttccacctgggct 284
             |||||||| |||||||||||||||| | ||| |||||||
Sbjct: 13001 tttcactttgtccacctcagtttccctcccagctgggct 13039



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 306   taccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
             ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 13045 taccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 13090

---

>gb|AY747606.1| Triticum aestivum cultivar Triple Dirk C line VRN-D1 (VRN-D1) gene,
             complete cds
          Length = 12335

 Score =  315 bits (159), Expect = 5e-83
 Identities = 252/279 (90%), Gaps = 3/279 (1%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             |||||||| ||||| |||||||||||| |||| ||||| |||| |||| |||||||||||
Sbjct: 11955 gagggcaggggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccactgt 12013

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 12014 ggatggtgagccacatcaacggctgaagggcttccagcccatataagcgtactattcagt 12073

                                                                         
Query: 128   a-cgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatg-ctaac 185
             |  ||||||||||||||||||||||| |||||||||  ||||||||| | || | || ||
Sbjct: 12074 agagagtaacaagttgcaccggccagtctggtgtatgttgcggttgctagcacgcctgac 12133

                                                                         
Query: 186   cccatggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtata 245
             ||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 12134 cccttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagcgatgtgtata 12193

                                                    
Query: 246   tttcacttcgtccacctcagtttcctttccacctgggct 284
             |||||||| ||||||| |||||||| | ||| |||||||
Sbjct: 12194 tttcactttgtccaccccagtttccctcccagctgggct 12232



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 306   taccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
             ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 12238 taccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 12283

---

>gb|AY747605.1| Aegilops tauschii BAC 22J2 VRN-D1 (VRN-D1) gene, complete cds
          Length = 12224

 Score =  315 bits (159), Expect = 5e-83
 Identities = 252/279 (90%), Gaps = 3/279 (1%)
 Strand = Plus / Plus

                                                                         
Query: 8     gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
             |||||||| ||||| |||||||||||| |||| ||||| |||| |||| |||||||||||
Sbjct: 11844 gagggcaggggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccactgt 11902

                                                                         
Query: 68    ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
             |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 11903 ggatggtgagccacatcaacggctgaagggcttccagcccatataagcgtactattcagt 11962

                                                                         
Query: 128   a-cgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatg-ctaac 185
             |  ||||||||||||||||||||||| |||||||||  ||||||||| | || | || ||
Sbjct: 11963 agagagtaacaagttgcaccggccagtctggtgtatgttgcggttgctagcacgcctgac 12022

                                                                         
Query: 186   cccatggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtata 245
             ||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 12023 cccttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagcgatgtgtata 12082

                                                    
Query: 246   tttcacttcgtccacctcagtttcctttccacctgggct 284
             |||||||| ||||||| |||||||| | ||| |||||||
Sbjct: 12083 tttcactttgtccaccccagtttccctcccagctgggct 12121



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                           
Query: 306   taccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
             ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 12127 taccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 12172

---

>gb|AY747597.1| Triticum aestivum cultivar Triple Dirk E line VRN-D1 (VRN-D1) gene,
            complete cds
          Length = 8100

 Score =  315 bits (159), Expect = 5e-83
 Identities = 252/279 (90%), Gaps = 3/279 (1%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            |||||||| ||||| |||||||||||| |||| ||||| |||| |||| |||||||||||
Sbjct: 7720 gagggcaggggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccactgt 7778

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 7779 ggatggtgagccacatcaacggctgaagggcttccagcccatataagcgtactattcagt 7838

                                                                        
Query: 128  a-cgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatg-ctaac 185
            |  ||||||||||||||||||||||| |||||||||  ||||||||| | || | || ||
Sbjct: 7839 agagagtaacaagttgcaccggccagtctggtgtatgttgcggttgctagcacgcctgac 7898

                                                                        
Query: 186  cccatggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtata 245
            ||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 7899 cccttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagcgatgtgtata 7958

                                                   
Query: 246  tttcacttcgtccacctcagtttcctttccacctgggct 284
            |||||||| ||||||| |||||||| | ||| |||||||
Sbjct: 7959 tttcactttgtccaccccagtttccctcccagctgggct 7997



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                          
Query: 306  taccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
            ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 8003 taccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 8048

---

>dbj|AB007504.1| Triticum aestivum TaMADS#11 mRNA for MADS box transcription factor,
            complete cds
          Length = 1161

 Score =  315 bits (159), Expect = 5e-83
 Identities = 252/279 (90%), Gaps = 3/279 (1%)
 Strand = Plus / Plus

                                                                        
Query: 8    gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
            |||||||| ||||| |||||||||||| |||| ||||| |||| |||| |||||||||||
Sbjct: 725  gagggcaggggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccactgt 783

                                                                        
Query: 68   ggatggtgagccacatcaacggctgaagggcttccagcccatgtaagcgtactattcagt 127
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 784  ggatggtgagccacatcaacggctgaagggcttccagcccatataagcgtactattcagt 843

                                                                        
Query: 128  a-cgagtaacaagttgcaccggccagcctggtgtatcatgcggttgcgaacatg-ctaac 185
            |  ||||||||||||||||||||||| |||||||||  ||||||||| | || | || ||
Sbjct: 844  agagagtaacaagttgcaccggccagtctggtgtatgttgcggttgctagcacgcctgac 903

                                                                        
Query: 186  cccatggaggggagaggaaaagaaatcagagtaaagtagcaagctgcaggaatgtgtata 245
            ||| ||||||||| |||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 904  cccttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagcgatgtgtata 963

                                                   
Query: 246  tttcacttcgtccacctcagtttcctttccacctgggct 284
            |||||||| ||||||| |||||||| | ||| |||||||
Sbjct: 964  tttcactttgtccaccccagtttccctcccagctgggct 1002



 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 42/46 (91%)
 Strand = Plus / Plus

                                                          
Query: 306  taccatgtaatttatatgtagcatgagtgacgaattttcaactttc 351
            ||||||||||| |||||||||| ||||||| |||||||||| ||||
Sbjct: 1008 taccatgtaatctatatgtagcttgagtgatgaattttcaagtttc 1053

---

>gb|AY466447.1| Triticum turgidum subsp. durum clone BAC 1225D16 VRN-B1 gene,
           partial cds
          Length = 965

 Score =  107 bits (54), Expect = 2e-20
 Identities = 79/86 (91%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
           |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||||||
Sbjct: 881 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccactgt 939

                                     
Query: 68  ggatggtgagccacatcaacggctga 93
           ||||||| ||||||||||||||||||
Sbjct: 940 ggatggttagccacatcaacggctga 965

---

>gb|AY466446.1| Aegilops tauschii clone BAC 22J2 VRN-D1 gene, partial cds
          Length = 957

 Score =  107 bits (54), Expect = 2e-20
 Identities = 79/86 (91%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
           |||||||| ||||| |||||||||||| |||| ||||| |||| |||| |||||||||||
Sbjct: 873 gagggcaggggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccactgt 931

                                     
Query: 68  ggatggtgagccacatcaacggctga 93
           ||||||||||||||||||||||||||
Sbjct: 932 ggatggtgagccacatcaacggctga 957

---

>gb|AY466448.1| Triticum turgidum subsp. durum clone BAC 1256C17 VRN-A1 gene,
           partial cds
          Length = 959

 Score = 99.6 bits (50), Expect = 6e-18
 Identities = 75/82 (91%), Gaps = 1/82 (1%)
 Strand = Plus / Plus

                                                                       
Query: 8   gagggcagaggatgtggcagtgcagcctcaggtcccactccggnacggcgcttccactgt 67
           |||||||||||||| |||||||||||| |||| ||||| |||| |||| |||||||| ||
Sbjct: 875 gagggcagaggatgcggcagtgcagccgcaggccccaccccgg-acggggcttccaccgt 933

                                 
Query: 68  ggatggtgagccacatcaacgg 89
           ||||||||||||||||||||||
Sbjct: 934 ggatggtgagccacatcaacgg 955

---

>gb|AY198326.1| Lolium perenne MADS1 mRNA, complete cds
          Length = 1284

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 86/104 (82%), Gaps = 5/104 (4%)
 Strand = Plus / Plus

                                                                       
Query: 52  acggcgcttccactgtggatggtgagccacatcaac---ggctgaaggg--cttccagcc 106
           |||| ||||||||  ||||||||||| |||||||||   ||||||||||  ||||||  |
Sbjct: 857 acggtgcttccaccatggatggtgagtcacatcaacaatggctgaaggggccttccactc 916

                                                       
Query: 107 catgtaagcgtactattcagtacgagtaacaagttgcaccggcc 150
           ||| ||| |||| ||||||||||| ||| | || ||||||||||
Sbjct: 917 catctaaacgtattattcagtacgtgtagcgagctgcaccggcc 960

---

>gb|AY395715.1| Dendrocalamus latiflorus MADS-box protein (Mads2) mRNA, complete
           cds
          Length = 735

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 67  tggatggtgagccacatcaacggct 91
           |||||||||||||||||||||||||
Sbjct: 709 tggatggtgagccacatcaacggct 733

---

>gb|AY395714.1| Dendrocalamus latiflorus MADS-box protein (Mads1) mRNA, complete
           cds
          Length = 735

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 67  tggatggtgagccacatcaacggct 91
           |||||||||||||||||||||||||
Sbjct: 709 tggatggtgagccacatcaacggct 733

---

>gb|AF035378.1|AF035378 Lolium temulentum MADS-box protein 1 (MADS1) mRNA, complete cds
          Length = 1207

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 85/104 (81%), Gaps = 5/104 (4%)
 Strand = Plus / Plus

                                                                       
Query: 52  acggcgcttccactgtggatggtgagccacatcaac---ggctgaaggg--cttccagcc 106
           |||| ||||||||  ||||||||||| ||| |||||   ||||||||||  ||||||  |
Sbjct: 833 acggtgcttccaccatggatggtgagtcacctcaacaatggctgaagggtccttccactc 892

                                                       
Query: 107 catgtaagcgtactattcagtacgagtaacaagttgcaccggcc 150
           ||| ||| |||| ||||||||||| ||| | || ||||||||||
Sbjct: 893 catctaaacgtattattcagtacgtgtagcgagctgcaccggcc 936

---

>gb|AC103358.7| Mus musculus chromosome 19, clone RP24-358I11, complete sequence
          Length = 117340

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 196   ggagaggaaaagaaatcagagt 217
             ||||||||||||||||||||||
Sbjct: 26730 ggagaggaaaagaaatcagagt 26709

---

>emb|AL161452.19| Human DNA sequence from clone RP11-426A6 on chromosome 9 Contains the
             OBP2A gene for odorant-binding protein 2A, the LCN1 gene
             for lipocalin 1, the MRPS2 gene for mitochondrial
             ribosomal protein S2, gene MGC29761, a novel gene, gene
             KIAA0649, a novel gene, a novel gene, a suppressor of
             cytokine signaling 5 (SOCS5) pseudogene and two CpG
             islands, complete sequence
          Length = 153231

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 185   ccccatggaggggagaggaaaa 206
             ||||||||||||||||||||||
Sbjct: 51021 ccccatggaggggagaggaaaa 51042

---

>gb|AC157907.2| Mus musculus chromosome 19, clone RP23-79H21, complete sequence
          Length = 153518

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 196   ggagaggaaaagaaatcagagt 217
             ||||||||||||||||||||||
Sbjct: 56816 ggagaggaaaagaaatcagagt 56837

---

>gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 217496

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 188    catggaggggagaggaaaaga 208
              |||||||||||||||||||||
Sbjct: 139214 catggaggggagaggaaaaga 139234

---

>ref|XM_469789.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 813

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 67  tggatggtgagccacatcaacggct 91
           |||||| ||||||||||||||||||
Sbjct: 759 tggatgctgagccacatcaacggct 783

---

>gb|AF377947.3| Oryza sativa (japonica cultivar-group) chromosome 3, BAC clone
             OSJNBa0032E21, complete sequence
          Length = 137580

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 67    tggatggtgagccacatcaacggct 91
             |||||| ||||||||||||||||||
Sbjct: 64138 tggatgctgagccacatcaacggct 64162

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 67       tggatggtgagccacatcaacggct 91
                |||||| ||||||||||||||||||
Sbjct: 30739645 tggatgctgagccacatcaacggct 30739621

---

>gb|AY551916.1| Oryza sativa (japonica cultivar-group) MADS-box protein RMADS211
           mRNA, complete cds
          Length = 1109

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 67  tggatggtgagccacatcaacggct 91
           |||||| ||||||||||||||||||
Sbjct: 837 tggatgctgagccacatcaacggct 861

---

>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete
             sequence
          Length = 157970

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 67    tggatggtgagccacatcaacggct 91
             |||||| ||||||||||||||||||
Sbjct: 22745 tggatgctgagccacatcaacggct 22769

---

>emb|AL512663.4| Human DNA sequence from clone RP11-356H7 on chromosome 1, complete
             sequence
          Length = 75171

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   tctaccatgtaatttatatgt 324
             |||||||||||||||||||||
Sbjct: 24199 tctaccatgtaatttatatgt 24219

---

>gb|AY332478.1| Oryza sativa (japonica cultivar-group) MADS box protein (AGL10)
           mRNA, complete cds
          Length = 964

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 67  tggatggtgagccacatcaacggct 91
           |||||| ||||||||||||||||||
Sbjct: 803 tggatgctgagccacatcaacggct 827

---

>gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 genomic sequence, complete
             sequence
          Length = 128294

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 67    tggatggtgagccacatcaacggct 91
             |||||| ||||||||||||||||||
Sbjct: 48346 tggatgctgagccacatcaacggct 48322

---

>gb|AC158678.6| Mus musculus 6 BAC RP23-142I6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 217586

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 188    catggaggggagaggaaaaga 208
              |||||||||||||||||||||
Sbjct: 164020 catggaggggagaggaaaaga 164000

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 67       tggatggtgagccacatcaacggct 91
                |||||| ||||||||||||||||||
Sbjct: 30831069 tggatgctgagccacatcaacggct 30831045

---

>gb|AF139664.2|AF139664 Oryza sativa FDRMADS6 mRNA, complete cds
          Length = 1101

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 67  tggatggtgagccacatcaacggct 91
           |||||| ||||||||||||||||||
Sbjct: 730 tggatgctgagccacatcaacggct 754

---

>gb|AC012485.13| Homo sapiens BAC clone RP11-5O24 from 2, complete sequence
          Length = 168738

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    tggcagtgcagcctcaggtcc 42
             |||||||||||||||||||||
Sbjct: 55184 tggcagtgcagcctcaggtcc 55164

---

>gb|AF058697.1|AF058697 Oryza sativa MADS14 protein mRNA, complete cds
          Length = 1373

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 67   tggatggtgagccacatcaacggct 91
            |||||| ||||||||||||||||||
Sbjct: 1002 tggatgctgagccacatcaacggct 1026

---

>emb|AL929212.8| Mouse DNA sequence from clone RP23-65G6 on chromosome 2, complete
              sequence
          Length = 255261

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 5      cacgagggcagaggatgtggc 25
              |||||||||||||||||||||
Sbjct: 153150 cacgagggcagaggatgtggc 153130

---

>gb|AC153867.3| Mus musculus 6 BAC RP23-400K22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse6 BAC Library) complete sequence
          Length = 196838

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 188    catggaggggagaggaaaaga 208
              |||||||||||||||||||||
Sbjct: 192904 catggaggggagaggaaaaga 192924

---

>dbj|AB041020.1| Oryza sativa RAP1B mRNA for AP1-like MADS box protein, complete cds
          Length = 1124

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 67  tggatggtgagccacatcaacggct 91
           |||||| ||||||||||||||||||
Sbjct: 720 tggatgctgagccacatcaacggct 744

---

>gb|AC183300.4| Pan troglodytes BAC clone CH251-263P14 from chromosome 4, complete
              sequence
          Length = 171121

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    ggaggggagaggaaaagaaa 210
              ||||||||||||||||||||
Sbjct: 159873 ggaggggagaggaaaagaaa 159854



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   ggaggggagaggaaaagaaa 210
             ||||||||||||||||||||
Sbjct: 49309 ggaggggagaggaaaagaaa 49290

---

>gb|AC137585.3| Mus musculus BAC clone RP23-355I23 from chromosome 18, complete
             sequence
          Length = 216041

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   ggaggggagaggaaaagaaa 210
             ||||||||||||||||||||
Sbjct: 81501 ggaggggagaggaaaagaaa 81520

---

>gb|AC117118.4| Rattus norvegicus 1 BAC CH230-161O8 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 216036

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    gtaatttatatgtagcatga 331
              ||||||||||||||||||||
Sbjct: 160097 gtaatttatatgtagcatga 160116

---

>gb|AC125109.3| Mus musculus BAC clone RP24-232H5 from chromosome 3, complete sequence
          Length = 165361

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    atggaggggagaggaaaaga 208
              ||||||||||||||||||||
Sbjct: 142273 atggaggggagaggaaaaga 142292

---

>gb|AC125074.3| Mus musculus BAC clone RP23-464N18 from chromosome 14, complete sequence
          Length = 181200

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    ggaggggagaggaaaagaaa 210
              ||||||||||||||||||||
Sbjct: 115298 ggaggggagaggaaaagaaa 115317

---

>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 193     aggggagaggaaaagaaatc 212
               ||||||||||||||||||||
Sbjct: 4111547 aggggagaggaaaagaaatc 4111566

---

>emb|AL365260.11| Human DNA sequence from clone RP11-433J22 on chromosome 1 Contains the
             GJA5 gene for gap junction protein, alpha 5, 40kDa
             (connexin 40) protein, complete sequence
          Length = 114412

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   tccacctcagtttcctttcc 275
             ||||||||||||||||||||
Sbjct: 43085 tccacctcagtttcctttcc 43104

---

>emb|AL139320.18| Human DNA sequence from clone RP11-154C3 on chromosome 13 Contains a
             cytochrome c oxidase subunit IV pseudogene, a novel gene,
             an aldo-keto reductase family 1, member B10 (aldose
             reductase) (AKR1B10) pseudogene, a novel gene, similar to
             RIKEN cDNA 1700086N05 and CpG island, complete sequence
          Length = 112107

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 196   ggagaggaaaagaaatcaga 215
             ||||||||||||||||||||
Sbjct: 46544 ggagaggaaaagaaatcaga 46525

---

>emb|AL662783.13| Mouse DNA sequence from clone RP23-378N18 on chromosome 11 Contains the
             5' end of a novel gene, a novel gene (4933430M04Rik) and a
             pseudogene similar to part of DEAD (Asp-Glu-Ala-Asp) box
             polypeptide 5 (Ddx5), complete sequence
          Length = 181503

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 205   aagaaatcagagtaaagtag 224
             ||||||||||||||||||||
Sbjct: 84895 aagaaatcagagtaaagtag 84876

---

>gb|AC015813.12| Homo sapiens, clone RP11-159D12, complete sequence
          Length = 181494

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    cctcagtttcctttccacct 279
              ||||||||||||||||||||
Sbjct: 131377 cctcagtttcctttccacct 131358

---

>gb|AC154575.2| Mus musculus BAC clone RP23-248E1 from chromosome 14, complete sequence
          Length = 210912

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   ggaggggagaggaaaagaaa 210
             ||||||||||||||||||||
Sbjct: 58379 ggaggggagaggaaaagaaa 58360

---

>gb|AC182643.2| Pan troglodytes BAC clone CH251-219K6 from chromosome 4, complete
              sequence
          Length = 176400

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    ggaggggagaggaaaagaaa 210
              ||||||||||||||||||||
Sbjct: 102582 ggaggggagaggaaaagaaa 102601

---

>gb|AC093890.3| Homo sapiens BAC clone RP11-673E1 from 4, complete sequence
          Length = 171358

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   ggaggggagaggaaaagaaa 210
             ||||||||||||||||||||
Sbjct: 68526 ggaggggagaggaaaagaaa 68545

---

>gb|AC104090.3| Homo sapiens BAC clone RP11-780M14 from 4, complete sequence
          Length = 101033

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   ggaggggagaggaaaagaaa 210
             ||||||||||||||||||||
Sbjct: 94727 ggaggggagaggaaaagaaa 94746

---

>gb|AC177797.3| Mus musculus BAC clone RP24-558G11 from chromosome y, complete sequence
          Length = 174066

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 300    gtaatctaccatgtaatttatatg 323
              ||||||||||||||| ||||||||
Sbjct: 100735 gtaatctaccatgtattttatatg 100712

---

>gb|AC048387.16| Homo sapiens chromosome 8, clone RP11-465K16, complete sequence
          Length = 193896

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 190   tggaggggagaggaaaagaa 209
             ||||||||||||||||||||
Sbjct: 95971 tggaggggagaggaaaagaa 95990

---

>gb|AC004757.2| Homo sapiens chromosome 17, clone CTB-117K16, complete sequence
          Length = 107156

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   cctcagtttcctttccacct 279
             ||||||||||||||||||||
Sbjct: 82669 cctcagtttcctttccacct 82688

---

>gb|AC131790.4| Mus musculus BAC clone RP24-447L18 from 3, complete sequence
          Length = 170634

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 191    ggaggggagaggaaaagaaa 210
              ||||||||||||||||||||
Sbjct: 122854 ggaggggagaggaaaagaaa 122835

---

>emb|AL807764.9| Mouse DNA sequence from clone RP23-400F8 on chromosome 4, complete
             sequence
          Length = 226637

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   ggaggggagaggaaaagaaa 210
             ||||||||||||||||||||
Sbjct: 93943 ggaggggagaggaaaagaaa 93924


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,764,337
Number of Sequences: 3902068
Number of extensions: 3764337
Number of successful extensions: 75898
Number of sequences better than 10.0: 105
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 75594
Number of HSP's gapped (non-prelim): 213
length of query: 365
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 343
effective length of database: 17,147,199,772
effective search space: 5881489521796
effective search space used: 5881489521796
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---