ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal40a17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ... 383 e-106
2RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a... 367 e-101
3RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ... 365 e-101
4RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ... 357 2e-98
5RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ... 356 3e-98
6RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a... 350 2e-96
7RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a... 347 1e-95
8RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a... 346 4e-95
9RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ... 346 4e-95
10RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a... 345 5e-95
11RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a... 343 3e-94
12RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ... 342 4e-94
13RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a... 342 7e-94
14RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a... 337 1e-92
15RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a... 337 2e-92
16RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a... 304 1e-82
17RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a... 250 3e-66
18RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a... 248 8e-66
19RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase a... 38 0.027
20FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-) 33 0.66
21FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-) 33 0.66
22FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-) 33 0.66
23FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-) 33 0.66
24FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-) 33 0.66
25CD48A_ARATH (P54609) Cell division control protein 48 homolog A ... 33 0.66
26YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.... 33 0.66
27YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.... 33 0.66
28CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ... 32 1.1
29PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6) 32 1.5
30FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2... 32 1.9
31FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2... 32 1.9
32FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2... 32 1.9
33FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2... 32 1.9
34MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1)... 31 2.5
35PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteaso... 31 2.5
36TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h... 31 2.5
37AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-) 31 2.5
38PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Pro... 31 2.5
39PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (P... 31 2.5
40PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (P... 31 2.5
41FILA_HUMAN (P20930) Filaggrin 31 3.3
42EPHB6_PANTR (P0C0K6) Ephrin type-B receptor 6 precursor (Tyrosin... 31 3.3
43TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER... 31 3.3
44TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER... 31 3.3
45TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T... 31 3.3
46TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T... 31 3.3
47EPHB6_HUMAN (O15197) Ephrin type-B receptor 6 precursor (Tyrosin... 31 3.3
48DTD_BURPS (Q63QX1) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-) 31 3.3
49DTD_BURMA (Q62HB3) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-) 31 3.3
50ODP1_BUCBP (Q89AR0) Pyruvate dehydrogenase E1 component (EC 1.2.... 31 3.3
51PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog ... 30 4.3
52PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog ... 30 4.3
53FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.... 30 4.3
54YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC... 30 4.3
55PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog ... 30 4.3
56PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (P... 30 4.3
57EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosin... 30 4.3
58EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-... 30 4.3
59PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1... 30 5.6
60FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2... 30 5.6
61FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-) 30 5.6
62FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.... 30 5.6
63PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1... 30 7.3
64PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1... 30 7.3
65PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso... 30 7.3
66PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso... 30 7.3
67PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso... 30 7.3
68CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog 30 7.3
69PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso... 30 7.3
70AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg... 30 7.3
71AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-) 30 7.3
72RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3) 30 7.3
73CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h... 30 7.3
74FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-) 29 9.6
75PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Proteas... 29 9.6
76PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Proteas... 29 9.6
77LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA 29 9.6
78PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4) 29 9.6
79CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val... 29 9.6
80ODP1_HAEIN (P45119) Pyruvate dehydrogenase E1 component (EC 1.2.... 29 9.6
81ODP1_ECOLI (P0AFG8) Pyruvate dehydrogenase E1 component (EC 1.2.... 29 9.6
82ODP1_ECO57 (P0AFG9) Pyruvate dehydrogenase E1 component (EC 1.2.... 29 9.6 
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  383 bits (984), Expect = e-106
 Identities = 192/212 (90%), Positives = 192/212 (90%), Gaps = 19/212 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGKSFQCELVFAKMGINPI                   RQRYREAADMIKKGKMCCLF
Sbjct: 157 KGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLF 216

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNK ENPRVPIVVTGND
Sbjct: 217 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGND 276

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG
Sbjct: 277 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 336

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD
Sbjct: 337 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 368
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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  367 bits (942), Expect = e-101
 Identities = 179/211 (84%), Positives = 188/211 (89%), Gaps = 18/211 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI------------------RQRYREAADMIKKGKMCCLFI 163
           KGQGKSFQCELVFAKMGINPI                  RQRYREAAD+IKKGKMCCLFI
Sbjct: 158 KGQGKSFQCELVFAKMGINPIMMSAGELESGNGEPAKLIRQRYREAADIIKKGKMCCLFI 217

Query: 164 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 343
           NDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDF
Sbjct: 218 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDF 277

Query: 344 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 523
           STLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGA
Sbjct: 278 STLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGA 337

Query: 524 LRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           LRARVYDDEVRKWV  TG+ENIGKRLVNSR+
Sbjct: 338 LRARVYDDEVRKWVSDTGVENIGKRLVNSRE 368
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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  365 bits (938), Expect = e-101
 Identities = 179/211 (84%), Positives = 188/211 (89%), Gaps = 18/211 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI------------------RQRYREAADMIKKGKMCCLFI 163
           KGQGKSFQCELVFAKMGINPI                  RQRYREAAD+I KGKMCCLFI
Sbjct: 155 KGQGKSFQCELVFAKMGINPIMMSAGELESGNGEPAKLIRQRYREAADIINKGKMCCLFI 214

Query: 164 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 343
           NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPI+VTGNDF
Sbjct: 215 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDF 274

Query: 344 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 523
           STLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGA
Sbjct: 275 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 334

Query: 524 LRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           LRARVYDDEVRKWVG  G+ENI KRLVNSR+
Sbjct: 335 LRARVYDDEVRKWVGEIGVENISKRLVNSRE 365
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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  357 bits (915), Expect = 2e-98
 Identities = 173/212 (81%), Positives = 186/212 (87%), Gaps = 19/212 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGKSFQCELVFAKMGINPI                   RQRYREAAD+IKKGKMCCLF
Sbjct: 167 KGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLF 226

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGND
Sbjct: 227 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGND 286

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFG
Sbjct: 287 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFG 346

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           ALRARVY DEVRKWV   G++ IGK+LVNS++
Sbjct: 347 ALRARVYHDEVRKWVSEVGVDTIGKKLVNSKE 378
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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  356 bits (914), Expect = 3e-98
 Identities = 173/212 (81%), Positives = 185/212 (87%), Gaps = 19/212 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGKSFQCELVFAKMGINPI                   RQRYREAAD+IKKGKMCCLF
Sbjct: 167 KGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLF 226

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGND
Sbjct: 227 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGND 286

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFG
Sbjct: 287 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFG 346

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           ALRARVYDDEVRKWV   G++ IGK+LVNS++
Sbjct: 347 ALRARVYDDEVRKWVSEVGVDTIGKKLVNSKE 378
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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  350 bits (897), Expect = 2e-96
 Identities = 172/212 (81%), Positives = 185/212 (87%), Gaps = 19/212 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGKSFQCELVF KMGINPI                   RQRYREAA++I+KG MCCLF
Sbjct: 166 KGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLF 225

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGND
Sbjct: 226 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGND 285

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFG
Sbjct: 286 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFG 345

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           ALRARVYDDEVRKWV  TGIE IG++L+NSRD
Sbjct: 346 ALRARVYDDEVRKWVSGTGIELIGEKLLNSRD 377
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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  347 bits (891), Expect = 1e-95
 Identities = 169/212 (79%), Positives = 184/212 (86%), Gaps = 19/212 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGKSFQCELVFAKMGI PI                   RQRYREA+D+IKKGKM CLF
Sbjct: 163 KGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLF 222

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGND
Sbjct: 223 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGND 282

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFG
Sbjct: 283 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFG 342

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           ALRARVYDDEVR+WV  TG+ENI ++LVNS++
Sbjct: 343 ALRARVYDDEVRRWVSETGVENIARKLVNSKE 374
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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  346 bits (887), Expect = 4e-95
 Identities = 171/212 (80%), Positives = 181/212 (85%), Gaps = 19/212 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGKSFQCELV AKMGINPI                   RQRYREAAD+IKKGKMCCLF
Sbjct: 167 KGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLF 226

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPI+ TGND
Sbjct: 227 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGND 286

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD + DE +V +VD FPGQSIDFFG
Sbjct: 287 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFG 346

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           ALRARVYDDEVRK+V S G+E IGKRLVNSR+
Sbjct: 347 ALRARVYDDEVRKFVESLGVEKIGKRLVNSRE 378
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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  346 bits (887), Expect = 4e-95
 Identities = 170/212 (80%), Positives = 183/212 (86%), Gaps = 19/212 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGKSFQCELVF KMGINPI                   RQRYREAA++I+KG +CCLF
Sbjct: 171 KGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNICCLF 230

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGND
Sbjct: 231 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGND 290

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFG
Sbjct: 291 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFG 350

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           ALRARVYDDEVRKWV  TGIE IG +L+NS D
Sbjct: 351 ALRARVYDDEVRKWVSGTGIEAIGDKLLNSFD 382
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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  345 bits (886), Expect = 5e-95
 Identities = 168/212 (79%), Positives = 181/212 (85%), Gaps = 19/212 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGKSFQCELVFAKMGINPI                   RQRYREAAD+IKKGKMCCLF
Sbjct: 164 KGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLF 223

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGND
Sbjct: 224 INDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGND 283

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRM+KFYWAPTR+DRIG+C GIF+TD V  E +VK+VDTFPGQSIDFFG
Sbjct: 284 FSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFG 343

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           ALRARVYDDEVRKW    G+E IG+ LVNS++
Sbjct: 344 ALRARVYDDEVRKWAVGVGVERIGRNLVNSKE 375
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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  343 bits (879), Expect = 3e-94
 Identities = 166/212 (78%), Positives = 180/212 (84%), Gaps = 19/212 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGKSFQCELVFAKMGINPI                   RQRYREAAD+I KGKMC LF
Sbjct: 169 KGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALF 228

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPI+VTGND
Sbjct: 229 INDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGND 288

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TD V +E + K+VDTFPGQSIDFFG
Sbjct: 289 FSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFG 348

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           ALRARVYDDEVRKW+   G++  GK+LVNS++
Sbjct: 349 ALRARVYDDEVRKWISGVGVDATGKKLVNSKE 380
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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  342 bits (878), Expect = 4e-94
 Identities = 170/212 (80%), Positives = 179/212 (84%), Gaps = 19/212 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGKSFQCELVF KMGINPI                   RQRYREAA++I+KG MCCLF
Sbjct: 171 KGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLF 230

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGND
Sbjct: 231 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGND 290

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TDNV  E VVKIVD FPGQSIDFFG
Sbjct: 291 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFG 350

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           ALRARVYDDEVRKWV  TGIE IG +L+NS D
Sbjct: 351 ALRARVYDDEVRKWVSGTGIEKIGDKLLNSFD 382
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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  342 bits (876), Expect = 7e-94
 Identities = 166/212 (78%), Positives = 184/212 (86%), Gaps = 19/212 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGKSFQCELVFAKM I+PI                   RQRYREAAD+I+KGKMC LF
Sbjct: 167 KGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALF 226

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGND
Sbjct: 227 INDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGND 286

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF++DNV+ E +VK+VDTFPGQSIDFFG
Sbjct: 287 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFG 346

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           ALRARVYDDEVRKW+   G+++IGK+LVNS++
Sbjct: 347 ALRARVYDDEVRKWITGVGVDSIGKKLVNSKE 378
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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  337 bits (865), Expect = 1e-92
 Identities = 162/212 (76%), Positives = 182/212 (85%), Gaps = 19/212 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGKSFQCELVFAKMGINPI                   RQRYREA+D+IKKGKMC LF
Sbjct: 171 KGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMCVLF 230

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+N RVPI+VTGND
Sbjct: 231 INDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGND 290

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V ++ +V++VD  PGQSIDFFG
Sbjct: 291 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFG 350

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           ALRARVYDDEVRKW+   G++++GK+LVNS++
Sbjct: 351 ALRARVYDDEVRKWISGVGVDSVGKKLVNSKE 382
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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  337 bits (864), Expect = 2e-92
 Identities = 165/212 (77%), Positives = 179/212 (84%), Gaps = 19/212 (8%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGKSFQCELVFAK+GINPI                   RQRYREAAD+I KGKMC LF
Sbjct: 165 KGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALF 224

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDL+ GAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK++N RVPI+VTGND
Sbjct: 225 INDLEPGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGND 284

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TD V  E VVK+VD FPGQSIDFFG
Sbjct: 285 FSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFG 344

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSRD 616
           ALRARVY DEVRKWV S G++N+GK+LVNS+D
Sbjct: 345 ALRARVYHDEVRKWVNSVGVDNVGKKLVNSKD 376
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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  304 bits (779), Expect = 1e-82
 Identities = 150/211 (71%), Positives = 167/211 (79%), Gaps = 19/211 (9%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINPI-------------------RQRYREAADMIKKGKMCCLF 160
           KGQGK+FQC L + K+GI PI                   R RYREA+D+IKKG+MC LF
Sbjct: 140 KGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLF 199

Query: 161 INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 340
           INDLDAGAGRMG TTQYTVNNQMVNATLMNIAD PTNVQLPG+Y  EE PRVPIV TGND
Sbjct: 200 INDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGND 259

Query: 341 FSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFG 520
           FSTLYAPLIRDGRMEK+YW PTR+DRIGVC GIFQ DNV    V  +VDTFPGQSIDFFG
Sbjct: 260 FSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFG 319

Query: 521 ALRARVYDDEVRKWVGSTGIENIGKRLVNSR 613
           ALRARVYDD VR+W+  TG++ IG++LVN+R
Sbjct: 320 ALRARVYDDMVRQWITDTGVDKIGQQLVNAR 350
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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  250 bits (638), Expect = 3e-66
 Identities = 125/211 (59%), Positives = 151/211 (71%), Gaps = 20/211 (9%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINP-------------------IRQRYREAADMIK-KGKMCCL 157
           KG+GK+FQCEL F KMG+                     IR RYRE A++IK +GKMC L
Sbjct: 39  KGEGKTFQCELAFEKMGVEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVL 98

Query: 158 FINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGN 337
            INDLDAGAGR    TQYTVN Q+VNATLMNIAD PT+VQLPG Y+     RVPI+VTGN
Sbjct: 99  MINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSTPLRRVPIIVTGN 158

Query: 338 DFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFF 517
           DFSTLYAPLIRDGRMEKFYW P RD+++G+  GIF  D +S   V K+VD+FP QSIDFF
Sbjct: 159 DFSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFF 218

Query: 518 GALRARVYDDEVRKWVGSTGIENIGKRLVNS 610
            ALR+R+YD+++R ++   G EN+  R+VNS
Sbjct: 219 SALRSRIYDEQIRDFIHQVGYENVSLRVVNS 249
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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  248 bits (634), Expect = 8e-66
 Identities = 126/211 (59%), Positives = 149/211 (70%), Gaps = 20/211 (9%)
 Frame = +2

Query: 38  KGQGKSFQCELVFAKMGINP-------------------IRQRYREAADMIK-KGKMCCL 157
           KG+GK+FQCEL F KMGI                     IR RYRE A++IK +GKMC L
Sbjct: 39  KGEGKTFQCELAFEKMGIEVTLISGGELESPDAGDPARLIRLRYRETAELIKVRGKMCVL 98

Query: 158 FINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGN 337
            INDLDAGAGR    TQYTVN Q+VNATLMNIAD PT+VQLPG Y+     RVPI+VTGN
Sbjct: 99  MINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGN 158

Query: 338 DFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFF 517
           DFSTLYAPLIRDGRMEKFYW P RDD++G+  GIF  D +S   + ++VDTFP QSIDFF
Sbjct: 159 DFSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFF 218

Query: 518 GALRARVYDDEVRKWVGSTGIENIGKRLVNS 610
            ALR+R+YD ++R ++   G E I  R+VNS
Sbjct: 219 SALRSRIYDIQIRDFIHKVGFERISLRVVNS 249
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>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 37.7 bits (86), Expect = 0.027
 Identities = 16/17 (94%), Positives = 17/17 (100%)
 Frame = +2

Query: 479 IVDTFPGQSIDFFGALR 529
           +VDTFPGQSIDFFGALR
Sbjct: 1   LVDTFPGQSIDFFGALR 17
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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNA 238
           F +M +     R R+  +  KK   C +FI+++DA     GAG  GG   +    Q +N 
Sbjct: 221 FVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQ 277

Query: 239 TLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 388
            L         V++ G    E N  + ++   N    L   L+R GR ++
Sbjct: 278 ML---------VEMDGF---EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315
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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNA 238
           F +M +     R R+  +  KK   C +FI+++DA     GAG  GG   +    Q +N 
Sbjct: 221 FVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQ 277

Query: 239 TLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 388
            L         V++ G    E N  + ++   N    L   L+R GR ++
Sbjct: 278 ML---------VEMDGF---EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315
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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNA 238
           F +M +     R R+  +  KK   C +FI+++DA     GAG  GG   +    Q +N 
Sbjct: 221 FVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQ 277

Query: 239 TLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 388
            L         V++ G    E N  + ++   N    L   L+R GR ++
Sbjct: 278 ML---------VEMDGF---EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315
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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNA 238
           F +M +     R R+  +  KK   C +FI+++DA     GAG  GG   +    Q +N 
Sbjct: 221 FVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQ 277

Query: 239 TLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 388
            L         V++ G    E N  + ++   N    L   L+R GR ++
Sbjct: 278 ML---------VEMDGF---EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315
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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNA 238
           F +M +     R R+  +  KK   C +FI+++DA     GAG  GG   +    Q +N 
Sbjct: 221 FVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQ 277

Query: 239 TLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 388
            L         V++ G    E N  + ++   N    L   L+R GR ++
Sbjct: 278 ML---------VEMDGF---EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315
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>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 33/145 (22%), Positives = 61/145 (42%), Gaps = 13/145 (8%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDA-------GAGRMGGTTQYTVNNQMVNATLMNIADAPTN 271
           RE  D  ++   C LF ++LD+       G+G  GG     V NQ++  T M+  +A   
Sbjct: 563 REIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLL--TEMDGMNAKKT 620

Query: 272 VQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYW--APTRDDRIGVCKGIFQ 445
           V + G  N+ +               + + L+R GR+++  +   P  D R+ + K   +
Sbjct: 621 VFIIGATNRPD--------------IIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALR 666

Query: 446 TDNVSDE----SVVKIVDTFPGQSI 508
              ++ +    ++ K    F G  I
Sbjct: 667 KSPIAKDVDIGALAKYTQGFSGADI 691
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>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 30/114 (26%), Positives = 46/114 (40%)
 Frame = +2

Query: 71  VFAKMGINPIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMN 250
           +F  +G + IR  +REA    K    C +FI++LD+  G+   +  +  + Q +N  L  
Sbjct: 411 MFVGVGASRIRNLFREA----KANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAE 466

Query: 251 IADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 412
                       M   + N  V I+   N    L   LIR GR +     P  D
Sbjct: 467 ------------MDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPD 508
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>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 33.1 bits (74), Expect = 0.66
 Identities = 30/114 (26%), Positives = 46/114 (40%)
 Frame = +2

Query: 71  VFAKMGINPIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMN 250
           +F  +G + IR  +REA    K    C +FI++LD+  G+   +  +  + Q +N  L  
Sbjct: 353 MFVGVGASRIRNLFREA----KANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAE 408

Query: 251 IADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 412
                       M   + N  V I+   N    L   LIR GR +     P  D
Sbjct: 409 ------------MDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPD 450
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>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
           (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 6/138 (4%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 292
           RE  D  ++   C LF ++LD+ A + G +                 AD   N  L  M 
Sbjct: 563 REIFDKARQSAPCVLFFDELDSIATQRGNSA----------GDAGGAADRVLNQLLTEMD 612

Query: 293 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYW--APTRDDRIGVCKGIFQTDNVSDE 466
                  V I+   N    + + L+R GR+++  +   P  D R+ + K   +   V+ +
Sbjct: 613 GMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKD 672

Query: 467 ----SVVKIVDTFPGQSI 508
               ++ K    F G  I
Sbjct: 673 VDVTALAKYTQGFSGADI 690
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>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1135

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 6/146 (4%)
 Frame = +2

Query: 98   IRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQ 277
            +R+ +++A D     K C +F ++LD+ A + G        NQ  +  +M+   +    +
Sbjct: 894  VRRVFQKARD----AKPCVIFFDELDSVAPKRG--------NQGDSGGVMDRIVSQLLAE 941

Query: 278  LPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYW---APTRDDRIGVCKGI--- 439
            L GM   E    V +V   N    L   L+R GR +K  +   A T + +  + + +   
Sbjct: 942  LDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIADTHEKQAKIIQALTRK 1001

Query: 440  FQTDNVSDESVVKIVDTFPGQSIDFF 517
            FQ D   D   +     F     DF+
Sbjct: 1002 FQLDPSVDLGRIAETCPFTYTGADFY 1027
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>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNA 238
           F +M +     R R+  +  K+   C +FI+++DA     G G  GG  +     Q +N 
Sbjct: 224 FVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDE---REQTLNQ 280

Query: 239 TLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 388
            L         V++ G    E N  V I+   N    L   L+R GR ++
Sbjct: 281 ML---------VEMDGF---EANEGVVIIAATNRPDVLDRALLRPGRFDR 318
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>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNA 238
           F +M +     R R+  +  K+   C +FI+++DA     G G  GG  +     Q +N 
Sbjct: 224 FVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGNDE---REQTLNQ 280

Query: 239 TLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 388
            L         V++ G    E N  V I+   N    L   L+R GR ++
Sbjct: 281 ML---------VEMDGF---EANEGVVIIAATNRPDVLDRALLRPGRFDR 318
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>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNA 238
           F +M +     R R+  +  KK   C +FI+++DA     GAG  GG   +    Q +N 
Sbjct: 230 FVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQ 286

Query: 239 TLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 388
            L         V++ G      N  + I+   N    L   L+R GR ++
Sbjct: 287 LL---------VEMDGF---SANEGIIIIAATNRADILDPALLRPGRFDR 324
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>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 5/110 (4%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNA 238
           F +M +     R R+  +  KK   C +FI+++DA     GAG  GG   +    Q +N 
Sbjct: 235 FVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQ 291

Query: 239 TLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 388
            L         V++ G      N  + I+   N    L   L+R GR ++
Sbjct: 292 LL---------VEMDGF---SANEGIIIIAATNRADILDPALLRPGRFDR 329
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>MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1) (Protein nM15)|
          Length = 529

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
 Frame = -3

Query: 425 HRYGRHGWEPSRTSPYDHHGSEEXXXXXXXXXXXRWAHGGSPPCCTCQGAARWWGHR--R 252
           H    H W+  R  P+++    +            W H  +P     +G + W G    R
Sbjct: 181 HTLAFHDWQGPR--PWENLNLSDWEVQSPIQVSGDWEHPNTP-----RGLSGWEGPSTSR 233

Query: 251 CSSGWRSPSGC*RCTAWFRPS 189
             SGW  PS     +AW  PS
Sbjct: 234 ILSGWEGPSASWALSAWEGPS 254
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>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 407

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 5/137 (3%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 292
           R+   + K+   C +FI+++DA A +   T   T  ++ V  TLM +        L  M 
Sbjct: 231 RDVFKLAKEKSPCIIFIDEIDAVASKR--TESLTGGDREVQRTLMQL--------LAEMD 280

Query: 293 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKF--YWAPTRDDRIGVCKGIFQTDN---V 457
             +    V I+   N    L   ++R GR ++      P  D R+ + K   +  N   V
Sbjct: 281 GFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLKGV 340

Query: 458 SDESVVKIVDTFPGQSI 508
               V KI +   G  +
Sbjct: 341 DLREVAKIAENMVGADL 357
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>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
           (p97/CDC48 homolog 1)
          Length = 809

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDA-------GAGRMGGTTQYTVNNQMVNATLMNIADAPTN 271
           R+  D  +    C LF ++LD+       GAG  GG     V NQ++  T M+  +A  N
Sbjct: 566 RDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVL--TEMDGMNAKKN 623

Query: 272 VQLPGMYNKEENPRVPIVVTGNDFSTLYAPL 364
           V + G  N+ +     ++  G     +Y PL
Sbjct: 624 VFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 654
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>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
 Frame = +2

Query: 83  MGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMVNAT 241
           +G+ P R   R+   M +K   C LFI+++DA     G G +GG ++   T+N  +V   
Sbjct: 248 VGVGPAR--VRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVE-- 303

Query: 242 LMNIADAPTNV 274
            M+  ++ TNV
Sbjct: 304 -MDGFNSSTNV 313
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>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
 Frame = +2

Query: 65  ELVFAKMGINP--IRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QM 229
           EL+   +G  P  +R+ +R A +         +FI+++DA      GT +Y  N+   + 
Sbjct: 254 ELIQKYLGDGPKLVRELFRVAEEHAPS----IVFIDEIDAI-----GTKRYDSNSGGERE 304

Query: 230 VNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 409
           +  T++ + +     QL G  ++ +   V +++  N   TL   LIR GR+++    P  
Sbjct: 305 IQRTMLELLN-----QLDGFDSRGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356

Query: 410 DDRIGVCKGIFQ--------TDNVSDESVVKIVDTFPGQSI 508
           D++    K IFQ         D+V+ + ++   D   G  I
Sbjct: 357 DEK--TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADI 395
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>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
 Frame = +2

Query: 65  ELVFAKMGINP--IRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QM 229
           EL+   +G  P  +R+ +R A +         +FI+++DA      GT +Y  N+   + 
Sbjct: 254 ELIQKYLGDGPKLVRELFRVAEEHAPS----IVFIDEIDAI-----GTKRYDSNSGGERE 304

Query: 230 VNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 409
           +  T++ + +     QL G  ++ +   V +++  N   TL   LIR GR+++    P  
Sbjct: 305 IQRTMLELLN-----QLDGFDSRGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356

Query: 410 DDRIGVCKGIFQ--------TDNVSDESVVKIVDTFPGQSI 508
           D++    K IFQ         D+V+ + ++   D   G  I
Sbjct: 357 DEK--TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADI 395
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>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
 Frame = +2

Query: 65  ELVFAKMGINP--IRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QM 229
           EL+   +G  P  +R+ +R A +         +FI+++DA      GT +Y  N+   + 
Sbjct: 254 ELIQKYLGDGPKLVRELFRVAEEHAPS----IVFIDEIDAI-----GTKRYDSNSGGERE 304

Query: 230 VNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 409
           +  T++ + +     QL G  ++ +   V +++  N   TL   LIR GR+++    P  
Sbjct: 305 IQRTMLELLN-----QLDGFDSRGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLP 356

Query: 410 DDRIGVCKGIFQ--------TDNVSDESVVKIVDTFPGQSI 508
           D++    K IFQ         D+V+ + ++   D   G  I
Sbjct: 357 DEK--TKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADI 395
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>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
 Frame = +1

Query: 175  RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 300
            RW G   RNH  +   Q  DG RHP  H   R  H  +A    Q G
Sbjct: 3554 RWSGSASRNHRGSAQEQSRDGSRHPTSHHEDRAGHGHSAESSRQSG 3599



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = +1

Query: 175  RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 300
            RW G   RNH  +   Q  DG RHP  H+  R  H  +A    Q G
Sbjct: 2906 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2951



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = +1

Query: 175  RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 300
            RW G   RNH  +   Q  DG RHP  H+  R  H  +A    Q G
Sbjct: 2582 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2627



 Score = 30.0 bits (66), Expect = 5.6
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
 Frame = +1

Query: 175  RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 300
            RW G   RNH  +   Q  DG RHP  H   R  H  +A    Q G
Sbjct: 1933 RWSGSASRNHLGSAWEQSRDGSRHPGSHHEDRAGHGHSADSSRQSG 1978



 Score = 29.3 bits (64), Expect = 9.6
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = +1

Query: 175 RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAA 279
           RW G   RNH  +   Q  DG RHP  H   R  H  +A
Sbjct: 636 RWSGSASRNHHGSAQEQSRDGSRHPRSHHEDRAGHGHSA 674
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>EPHB6_PANTR (P0C0K6) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6)
          Length = 1005

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -3

Query: 311 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 186
           GGSPP   C G  +W    G  RC  G++   G   C A  R  Y
Sbjct: 262 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 306
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>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 6/138 (4%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 292
           RE  D  ++   C LF ++LD+ A   GG                  AD   N  L  M 
Sbjct: 559 REIFDKARQAAPCVLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMD 608

Query: 293 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDD--RIGVCKGIFQTDNVSD- 463
                  V I+   N    +   ++R GR+++  + P  D+  R+ + K   +   V+  
Sbjct: 609 GMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKD 668

Query: 464 ---ESVVKIVDTFPGQSI 508
              E + K+ + F G  +
Sbjct: 669 VDLEFLAKMTNGFSGADL 686
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>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 6/138 (4%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 292
           RE  D  ++   C LF ++LD+ A   GG                  AD   N  L  M 
Sbjct: 559 REIFDKARQAAPCVLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMD 608

Query: 293 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDD--RIGVCKGIFQTDNVSD- 463
                  V I+   N    +   ++R GR+++  + P  D+  R+ + K   +   V+  
Sbjct: 609 GMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKD 668

Query: 464 ---ESVVKIVDTFPGQSI 508
              E + K+ + F G  +
Sbjct: 669 VDLEFLAKMTNGFSGADL 686
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>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 6/138 (4%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 292
           RE  D  ++   C LF ++LD+ A   GG                  AD   N  L  M 
Sbjct: 559 REIFDKARQAAPCVLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMD 608

Query: 293 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDD--RIGVCKGIFQTDNVSD- 463
                  V I+   N    +   ++R GR+++  + P  D+  R+ + K   +   V+  
Sbjct: 609 GMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKD 668

Query: 464 ---ESVVKIVDTFPGQSI 508
              E + K+ + F G  +
Sbjct: 669 VDLEFLAKMTNGFSGADL 686
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>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 6/138 (4%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 292
           RE  D  ++   C LF ++LD+ A   GG                  AD   N  L  M 
Sbjct: 559 REIFDKARQAAPCVLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMD 608

Query: 293 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDD--RIGVCKGIFQTDNVSD- 463
                  V I+   N    +   ++R GR+++  + P  D+  R+ + K   +   V+  
Sbjct: 609 GMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKD 668

Query: 464 ---ESVVKIVDTFPGQSI 508
              E + K+ + F G  +
Sbjct: 669 VDLEFLAKMTNGFSGADL 686
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>EPHB6_HUMAN (O15197) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6) (HEP)
          Length = 1006

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -3

Query: 311 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 186
           GGSPP   C G  +W    G  RC  G++   G   C A  R  Y
Sbjct: 263 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 307
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>DTD_BURPS (Q63QX1) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)|
          Length = 152

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
 Frame = +2

Query: 140 GKMCCLFINDLDAGAGRMGG---TTQYTV---NNQMVNATLMNIADAPTNVQLPGMYNKE 301
           GKM  L +++LD GAGR GG    +Q+T+    N  +  +    A      +L   + + 
Sbjct: 60  GKMN-LPVSNLD-GAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRR 117

Query: 302 ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 409
              R PIV TG   + +   L+ DG +   +W  TR
Sbjct: 118 ARERHPIVATGEFGADMQVSLVNDGPVT--FWLQTR 151
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>DTD_BURMA (Q62HB3) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)|
          Length = 152

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
 Frame = +2

Query: 140 GKMCCLFINDLDAGAGRMGG---TTQYTV---NNQMVNATLMNIADAPTNVQLPGMYNKE 301
           GKM  L +++LD GAGR GG    +Q+T+    N  +  +    A      +L   + + 
Sbjct: 60  GKMN-LPVSNLD-GAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRR 117

Query: 302 ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 409
              R PIV TG   + +   L+ DG +   +W  TR
Sbjct: 118 ARERHPIVATGEFGADMQVSLVNDGPVT--FWLQTR 151
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>ODP1_BUCBP (Q89AR0) Pyruvate dehydrogenase E1 component (EC 1.2.4.1)|
          Length = 887

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
 Frame = +2

Query: 44  QGKSFQCELVFAKMGI-NPIRQRYREAADMI-------KKGKMCCLFINDLDAGAGRMGG 199
           + ++F  E +F K+GI N I Q+Y      +       KKG++    IN+L A A  +  
Sbjct: 523 EARTFGMEGLFRKIGIYNFIGQKYTPQDKELLAYYKEDKKGQILQEGINELGAAASWLAA 582

Query: 200 TTQYTVNN 223
            T Y+ NN
Sbjct: 583 ATSYSTNN 590
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>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
           (LEMA-1)
          Length = 423

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 7/139 (5%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGM 289
           R+A  + K+   C +FI+++DA G  R          ++ V  T++ + +     QL G 
Sbjct: 253 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS---GDREVQRTMLELLN-----QLDGF 304

Query: 290 YNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGIFQTDNVSD 463
                + R+ ++   N    L   L+R GR+++   +  PT + R  + +   +  NV+ 
Sbjct: 305 ---SSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVNP 361

Query: 464 ----ESVVKIVDTFPGQSI 508
               E + +  D F G  +
Sbjct: 362 DVNFEELARSTDDFNGAQL 380
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>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 424

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 7/139 (5%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGM 289
           R+A  + K+   C +FI+++DA G  R          ++ V  T++ + +     QL G 
Sbjct: 254 RDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVS---GDREVQRTMLELLN-----QLDGF 305

Query: 290 YNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGIFQTDN--- 454
            + E   R+ ++   N    L   L+R GR+++   +  PT + R  + +   +  N   
Sbjct: 306 SSDE---RIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQIHSRKMNVHP 362

Query: 455 -VSDESVVKIVDTFPGQSI 508
            V+ E + +  D F G  +
Sbjct: 363 DVNFEELARSTDDFNGAQL 381
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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 232
           F +M +     R R+  +  KK   C +FI+++DA     GAG  GG    + T+N  +V
Sbjct: 220 FVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 279
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>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 562 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 437
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44
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>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 429

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGM 289
           R+A  + K+   C +FI+++DA G  R          ++ V  T++ + +     QL G 
Sbjct: 259 RDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEVS---GDREVQRTMLELLN-----QLDGF 310

Query: 290 YNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 388
            + E   R+ ++   N    L   L+R GR+++
Sbjct: 311 SSDE---RIKVIAATNRADILDPALMRSGRLDR 340
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>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 11/159 (6%)
 Frame = +2

Query: 65  ELVFAKMGINPIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVN 235
           EL+   +G  P  +  RE   + ++     +FI+++DA      GT +Y  N+   + + 
Sbjct: 254 ELIQKYLGDGP--KLVRELFRVAEEHGPSIVFIDEIDAI-----GTKRYDSNSGGEREIQ 306

Query: 236 ATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDD 415
            T++ + +     QL G  ++ +   V +++  N   TL   LIR GR+++    P  D+
Sbjct: 307 RTMLELLN-----QLDGFDSRGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358

Query: 416 RIGVCKGIFQ--------TDNVSDESVVKIVDTFPGQSI 508
           +    K IFQ         D+V+ + ++   D   G  I
Sbjct: 359 K--TKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADI 395
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>EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6) (MEP)
          Length = 1014

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = -3

Query: 311 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 186
           GGSPP   C G  RW    G  RC  G +   G   C A    SY
Sbjct: 273 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQACPEGSY 317
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>EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6)
          Length = 1013

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = -3

Query: 311 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 186
           GGSPP   C G  RW    G  RC  G +   G   C A    SY
Sbjct: 272 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQACPEGSY 316
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>PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -1

Query: 475 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 341
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGVPIKIIMEAI-QQASVAKKE 584

Query: 340 IV 335
           I+
Sbjct: 585 IL 586
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>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 28/115 (24%), Positives = 46/115 (40%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 253
           F +M +     R R+  +  KK   C +FI+++DA  GR  G       +     TL   
Sbjct: 224 FVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDA-VGRARGAIPVGGGHDEREQTL--- 279

Query: 254 ADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 418
                N  L  M   + +  + ++   N    L   L+R GR ++  + P  D R
Sbjct: 280 -----NQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVR 329
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>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNA 238
           F +M +     R R+  +  +K   C +FI+++DA     GAG  GG   +    Q +N 
Sbjct: 221 FVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQ 277

Query: 239 TLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 388
            L         V++ G    + N  V ++   N    L   L+R GR ++
Sbjct: 278 ML---------VEMDGF---DGNEGVILIAATNRPDVLDPALLRPGRFDR 315
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>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
 Frame = +2

Query: 71  VFAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVN 235
           +F  +G + +R  +++A    K+   C +FI+++DA     GAG  GG  +         
Sbjct: 244 MFVGVGASRVRDLFKKA----KENAPCLIFIDEIDAVGRQRGAGIGGGNDE--------- 290

Query: 236 ATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 388
                  +   N  L  M   E N  + I+   N    L + L+R GR ++
Sbjct: 291 ------REQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDR 335
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>PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1)
          Length = 783

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -1

Query: 475 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 341
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 340 IV 335
           I+
Sbjct: 585 IL 586
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>PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -1

Query: 475 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 341
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 340 IV 335
           I+
Sbjct: 585 IL 586
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>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 292
           RE   + K+     +FI++LDA A R   T   T  ++ V  T+M +       +L G  
Sbjct: 224 REVFQLAKEKAPSIIFIDELDAIAARR--TNSDTSGDREVQRTMMQLL-----AELDGF- 275

Query: 293 NKEENPRVPIVVTG--NDFSTLYAPLIRDGRMEKFYWA--PTRDDRIGVCK 433
               +PR  + V G  N    L   ++R GR ++      PT + RI + K
Sbjct: 276 ----DPRGDVKVIGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFK 322
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>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 27/97 (27%), Positives = 46/97 (47%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 292
           RE  +M +K     +FI++LD+ A R    T  T  ++ V  TLM +       ++ G +
Sbjct: 242 REIFEMARKKAPSIIFIDELDSIAARRLNET--TGADREVQRTLMQLL-----AEMDG-F 293

Query: 293 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAP 403
           +K +N R  I+   N    L   ++R GR ++    P
Sbjct: 294 DKRKNIR--IIAATNRPDVLDPAILRPGRFDRLVHVP 328
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>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 8/153 (5%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-GAGRMG-GTTQYTVNNQMVNATLM 247
           FA+  +    +  RE  +M K+     +FI+++DA GA R+  GT+      + +  TLM
Sbjct: 204 FAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGTS----GEREIQRTLM 259

Query: 248 NIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGV 427
            +       +L G    +    V I+   N    L   L+R GR ++    P  D +   
Sbjct: 260 QLL-----AELDGF---DPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRT 311

Query: 428 ------CKGIFQTDNVSDESVVKIVDTFPGQSI 508
                  K +   DN++ E + ++ + F G  I
Sbjct: 312 EIFNIYLKKMKIEDNINLELLSQLTEGFSGADI 344
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>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 24/101 (23%), Positives = 40/101 (39%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 292
           RE  D  ++   C LF ++LD+ A + G +          +      AD   N  L  M 
Sbjct: 564 REIFDKARQSAPCVLFFDELDSIATQRGSS----------SGDAGGAADRVLNQLLTEMD 613

Query: 293 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDD 415
                  V I+   N    +   L+R GR+++  + P  D+
Sbjct: 614 GMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDE 654
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>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 27/97 (27%), Positives = 46/97 (47%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 292
           RE  +M +K     +FI++LD+ A R    T  T  ++ V  TLM +       ++ G +
Sbjct: 242 REIFEMARKKAPSIIFIDELDSIAARRLNET--TGADREVQRTLMQLL-----AEMDG-F 293

Query: 293 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAP 403
           +K +N R  I+   N    L   ++R GR ++    P
Sbjct: 294 DKRKNIR--IIAATNRPDVLDPAILRPGRFDRLVHVP 328
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>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
 Frame = +2

Query: 83  MGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMVNAT 241
           +G+ P R   R+   + +K   C LFI+++DA     G G  GG ++   T+N  +V   
Sbjct: 382 VGVGPAR--VRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVE-- 437

Query: 242 LMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAP-LIRDGRMEK 388
            M+  +  TNV               +++ G +   +  P L+R GR ++
Sbjct: 438 -MDGFNTTTNV---------------VILAGTNRPDILDPALLRPGRFDR 471
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>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 8/110 (7%)
 Frame = +2

Query: 83  MGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMVNAT 241
           +G+ P R   R+   + +K   C LFI+++DA     G G  GG ++   T+N  +V   
Sbjct: 381 VGVGPAR--VRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVE-- 436

Query: 242 LMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAP-LIRDGRMEK 388
            M+  +  TNV               +++ G +   +  P L+R GR ++
Sbjct: 437 -MDGFNTTTNV---------------VILAGTNRPDILDPALLRPGRFDR 470
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>RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)|
          Length = 241

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 15/159 (9%)
 Frame = +2

Query: 182 AGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAP 361
           A ++G T  +T   + +  T++ +     N Q+ G   KE+N  V + V      T+Y P
Sbjct: 7   AQKVGMTRVFTEAGEHIPVTVLKLG----NCQVLGHRTKEKNGYVALQVGSGSRKTVYMP 62

Query: 362 LIRDGRMEKFYWAPTR--------DDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSID-- 511
               G+       P R        +D +       Q D+      V +  T  G+     
Sbjct: 63  KAERGQFAAAKVEPKRKVEEFRVSEDALLPVGAEIQADHFVVGQFVDVTGTSTGKGFAGG 122

Query: 512 ----FFGALRARVYDDEVRKWVGST-GIENIGKRLVNSR 613
                FG LRA        + +GST G ++ GK   N +
Sbjct: 123 MKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKK 161
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>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
           (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score = 29.6 bits (65), Expect = 7.3
 Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 6/138 (4%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 292
           RE  D  ++   C LF ++LD+ A + G +                 AD   N  L  M 
Sbjct: 564 REIFDKARQSAPCVLFFDELDSIATQRGNSV----------GDAGGAADRVLNQLLTEMD 613

Query: 293 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDD--RIGVCKGIFQTDNVSDE 466
                  V I+   N    +   L+R GR+++  + P  D+  R  + K   +   V+ +
Sbjct: 614 GMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKD 673

Query: 467 ----SVVKIVDTFPGQSI 508
               ++ K    F G  I
Sbjct: 674 VDLRALAKYTQGFSGADI 691
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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 5/110 (4%)
 Frame = +2

Query: 74  FAKMGINPIRQRYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNA 238
           F +M +     R R+  +  +K   C +FI+++DA     GAG  GG   +    Q +N 
Sbjct: 221 FVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQ 277

Query: 239 TLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 388
            L         V++ G    + N  + ++   N    L   L+R GR ++
Sbjct: 278 ML---------VEMDGF---DGNEGIILIAATNRPDVLDPALLRPGRFDR 315
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>PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 445 LEDTLADTDTVVTGGSPVELLHTTITDQRSVERREIV 335
           +E   AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 333 VEGISADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369
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>PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 445 LEDTLADTDTVVTGGSPVELLHTTITDQRSVERREIV 335
           +E   AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 333 VEGISADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369
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>LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA|
          Length = 616

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
 Frame = -1

Query: 598 PLANVLDSGRADP------LAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDI---VG 446
           P+ N +D   ADP      LA LI   P      +V+G +  GVDDL DR+V +I   VG
Sbjct: 142 PVLNKIDLPAADPDKYAAELAGLIGGKPG--DVLRVSGKTGVGVDDLLDRVVQEIPAPVG 199

Query: 445 LEDTLA 428
             D  A
Sbjct: 200 AADAPA 205
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>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)|
          Length = 439

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
 Frame = +2

Query: 65  ELVFAKMGINP--IRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QM 229
           EL+   +G  P  +R+ +R A +         +FI+++DA      GT +Y  N+   + 
Sbjct: 253 ELIQKYLGDGPKLVRELFRVAEEHAPS----IVFIDEIDAV-----GTKRYDSNSGGERE 303

Query: 230 VNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 409
           +  T++ + +     QL G  ++ +   V +++  N   TL   LIR GR+++    P  
Sbjct: 304 IQRTMLELLN-----QLDGFDSRGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLP 355

Query: 410 DDR 418
           D++
Sbjct: 356 DEK 358
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>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
           protein homolog) (VCP)
          Length = 807

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 24/101 (23%), Positives = 39/101 (38%)
 Frame = +2

Query: 113 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 292
           RE  D  ++   C LF ++LD+ A + G +                 AD   N  L  M 
Sbjct: 564 REIFDKARQSAPCVLFFDELDSIATQRGSSV----------GDAGGAADRVLNQLLTEMD 613

Query: 293 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDD 415
                  V I+   N    +   L+R GR+++  + P  D+
Sbjct: 614 GMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDE 654
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>ODP1_HAEIN (P45119) Pyruvate dehydrogenase E1 component (EC 1.2.4.1)|
          Length = 886

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
 Frame = +2

Query: 44  QGKSFQCELVFAKMGI-NPIRQRYREA-ADMI------KKGKMCCLFINDLDAGAGRMGG 199
           + ++F  E +F ++GI NP  Q Y  +  D++      K G++    IN+L A A  +  
Sbjct: 520 EARTFGMEGLFRQVGIYNPHGQNYIPSDRDLVAYYREAKDGQVLQEGINELGATASWLAA 579

Query: 200 TTQYTVNNQ 226
              Y+VNNQ
Sbjct: 580 ANSYSVNNQ 588
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>ODP1_ECOLI (P0AFG8) Pyruvate dehydrogenase E1 component (EC 1.2.4.1)|
          Length = 886

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
 Frame = +2

Query: 44  QGKSFQCELVFAKMGI-NPIRQRY----REAADMIK---KGKMCCLFINDLDAGAGRMGG 199
           + ++F  E +F ++GI +P  Q+Y    RE     K   KG++    IN+L AG   +  
Sbjct: 522 EARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGCSWLAA 581

Query: 200 TTQYTVNN 223
            T Y+ NN
Sbjct: 582 ATSYSTNN 589
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>ODP1_ECO57 (P0AFG9) Pyruvate dehydrogenase E1 component (EC 1.2.4.1)|
          Length = 886

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
 Frame = +2

Query: 44  QGKSFQCELVFAKMGI-NPIRQRY----REAADMIK---KGKMCCLFINDLDAGAGRMGG 199
           + ++F  E +F ++GI +P  Q+Y    RE     K   KG++    IN+L AG   +  
Sbjct: 522 EARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAGCSWLAA 581

Query: 200 TTQYTVNN 223
            T Y+ NN
Sbjct: 582 ATSYSTNN 589


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,815,980
Number of Sequences: 219361
Number of extensions: 2083573
Number of successful extensions: 6447
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 6118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6423
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5538924943
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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