Clone Name	baal40a17
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	999	0.0
2	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	999	0.0
3	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	864	0.0
4	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	803	0.0
5	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	700	0.0
6	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	652	0.0
7	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	505	e-140
8	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	498	e-137
9	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	490	e-135
10	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	490	e-135
11	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	490	e-135
12	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	490	e-135
13	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	490	e-135
14	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	490	e-135
15	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	490	e-135
16	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	490	e-135
17	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	448	e-122
18	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	448	e-122
19	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	448	e-122
20	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	448	e-122
21	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	434	e-118
22	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	414	e-112
23	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	414	e-112
24	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	410	e-111
25	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	406	e-110
26	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	406	e-110
27	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	357	3e-95
28	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	349	7e-93
29	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	331	2e-87
30	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	331	2e-87
31	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	331	2e-87
32	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	331	2e-87
33	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	331	2e-87
34	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	331	2e-87
35	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	331	2e-87
36	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	331	2e-87
37	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	331	2e-87
38	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	331	2e-87
39	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	323	4e-85
40	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	323	4e-85
41	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	323	4e-85
42	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	317	2e-83
43	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	307	2e-80
44	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	307	2e-80
45	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	299	6e-78
46	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	293	3e-76
47	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	293	3e-76
48	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	293	3e-76
49	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	293	3e-76
50	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	293	3e-76
51	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	293	3e-76
52	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	293	3e-76
53	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	293	3e-76
54	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	289	5e-75
55	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	285	8e-74
56	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	285	8e-74
57	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	285	8e-74
58	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	285	8e-74
59	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	285	8e-74
60	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	285	8e-74
61	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	283	3e-73
62	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	281	1e-72
63	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	266	8e-68
64	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	260	5e-66
65	emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase	242	1e-60
66	gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate...	242	1e-60
67	gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/...	216	7e-53
68	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	212	1e-51
69	gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1...	210	4e-51
70	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	208	2e-50
71	gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA...	204	2e-49
72	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	198	2e-47
73	emb|Y10657.1|CLRCAGENE C.littorale rca gene	198	2e-47
74	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	196	6e-47
75	gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur...	192	9e-46
76	gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur...	192	9e-46
77	gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi...	182	9e-43
78	emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha...	178	1e-41
79	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	176	6e-41
80	gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m...	170	3e-39
81	emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat...	159	1e-35
82	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	149	1e-32
83	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	139	1e-29
84	gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence	133	8e-28
85	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	123	7e-25
86	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	117	4e-23
87	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	117	4e-23
88	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	100	1e-17
89	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	92	3e-15
90	emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis...	88	4e-14
91	gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se...	78	4e-11
92	gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se...	78	4e-11
93	gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic s...	68	4e-08
94	ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G7...	56	1e-04
95	gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	1e-04
96	gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	1e-04
97	emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Co...	56	1e-04
98	dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown ...	56	1e-04
99	gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N...	56	1e-04
100	emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Co...	54	6e-04
101	emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom...	42	2.1
102	emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Co...	42	2.1
103	gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complet...	40	8.4
104	emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding prot...	40	8.4
105	gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC...	40	8.4
106	gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome	40	8.4
107	ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like f...	40	8.4
108	ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like f...	40	8.4
109	gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence	40	8.4
110	ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302 ...	40	8.4
111	gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein p...	40	8.4

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score =  999 bits (504), Expect = 0.0
 Identities = 516/520 (99%)
 Strand = Plus / Plus

                                                                        
Query: 97   catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 156
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 785

                                                                        
Query: 157  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 845

                                                                        
Query: 217  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 905

                                                                        
Query: 277  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
            ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 906  gctccctggcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaa 965

                                                                        
Query: 337  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 966  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 1025

                                                                        
Query: 397  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1026 ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 1085

                                                                        
Query: 457  cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgacttttt 516
            | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1086 ctgtgacgagtctgtcgtaaagatcgtcgacaccttcccaggacaatccattgacttttt 1145

                                                                        
Query: 517  cggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccgg 576
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1146 cggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccgg 1205

                                                    
Query: 577  aatcgagaacattggcaagaggctggtgaactcgcgggac 616
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1206 aatcgagaacattggcaagaggctggtgaactcgcgggac 1245



 Score =  190 bits (96), Expect = 4e-45
 Identities = 96/96 (100%)
 Strand = Plus / Plus

                                                                       
Query: 6   agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 637

                                               
Query: 66  agcttgtgttcgccaagatgggcatcaaccccatca 101
           ||||||||||||||||||||||||||||||||||||
Sbjct: 638 agcttgtgttcgccaagatgggcatcaaccccatca 673

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score =  999 bits (504), Expect = 0.0
 Identities = 516/520 (99%)
 Strand = Plus / Plus

                                                                       
Query: 97  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 156
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 530

                                                                       
Query: 157 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 590

                                                                       
Query: 217 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 650

                                                                       
Query: 277 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
           ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 651 gctccctggcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaa 710

                                                                       
Query: 337 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 770

                                                                       
Query: 397 ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 456
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 830

                                                                       
Query: 457 cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgacttttt 516
           | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 ctgtgacgagtctgtcgtaaagatcgtcgacaccttcccaggacaatccattgacttttt 890

                                                                       
Query: 517 cggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccgg 576
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 cggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccgg 950

                                                   
Query: 577 aatcgagaacattggcaagaggctggtgaactcgcgggac 616
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 aatcgagaacattggcaagaggctggtgaactcgcgggac 990



 Score =  190 bits (96), Expect = 4e-45
 Identities = 96/96 (100%)
 Strand = Plus / Plus

                                                                       
Query: 6   agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 65
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 382

                                               
Query: 66  agcttgtgttcgccaagatgggcatcaaccccatca 101
           ||||||||||||||||||||||||||||||||||||
Sbjct: 383 agcttgtgttcgccaagatgggcatcaaccccatca 418

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score =  864 bits (436), Expect = 0.0
 Identities = 499/520 (95%)
 Strand = Plus / Plus

                                                                        
Query: 97   catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 156
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 705

                                                                        
Query: 157  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
            ||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||
Sbjct: 706  cttcatcaacgatcttgacgccggtgcgggtaggatgggcgggaccacacagtacaccgt 765

                                                                        
Query: 217  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
            ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 766  caacaaccagatggtgaacgccaccctcatgaacatcgccgatgcccccaccaatgtgca 825

                                                                        
Query: 277  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
            |||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 826  gctcccaggcatgtacaacaaggaggagaacccacgtgtgcccatcgtcgtcactggtaa 885

                                                                        
Query: 337  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
            ||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 886  cgatttctcgacgttgtacgcccctctgatccgtgatggtcgtatggagaagttctactg 945

                                                                        
Query: 397  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 456
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946  ggctcccacccgcgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 1005

                                                                        
Query: 457  cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgacttttt 516
            ||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1006 cagcgacgagtccgtcgtcaagatcgtcgacaccttcccaggacaatccatcgacttttt 1065

                                                                        
Query: 517  cggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccgg 576
            |||||||||||||||||||||||||||||| |||||||||||||||||   |||||||||
Sbjct: 1066 cggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacctctaccgg 1125

                                                    
Query: 577  aatcgagaacattggcaagaggctggtgaactcgcgggac 616
             ||||||||||||||||||| |||||||||||||||||||
Sbjct: 1126 tatcgagaacattggcaagaagctggtgaactcgcgggac 1165



 Score =  167 bits (84), Expect = 5e-38
 Identities = 93/96 (96%)
 Strand = Plus / Plus

                                                                       
Query: 6   agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 65
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 498 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatccttccagtgtg 557

                                               
Query: 66  agcttgtgttcgccaagatgggcatcaaccccatca 101
           ||||||| ||||||||||||||||||||||| ||||
Sbjct: 558 agcttgtcttcgccaagatgggcatcaacccaatca 593

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  803 bits (405), Expect = 0.0
 Identities = 411/413 (99%)
 Strand = Plus / Plus

                                                                        
Query: 97   catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 156
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6468 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 6527

                                                                        
Query: 157  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6528 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 6587

                                                                        
Query: 217  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6588 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 6647

                                                                        
Query: 277  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
            ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 6648 gctccctggcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaa 6707

                                                                        
Query: 337  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6708 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 6767

                                                                        
Query: 397  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 456
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6768 ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 6827

                                                                 
Query: 457  cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattg 509
            |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6828 cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattg 6880



 Score =  434 bits (219), Expect = e-118
 Identities = 405/467 (86%)
 Strand = Plus / Plus

                                                                        
Query: 102  ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 161
            ||||| ||||||| ||||| || ||||| ||||| ||||| |||||||||||||||||||
Sbjct: 3346 ggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttca 3405

                                                                        
Query: 162  tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 221
            ||||||| || ||||| || |||||  |||||||||| || ||||||||||| || ||||
Sbjct: 3406 tcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtgaaca 3465

                                                                        
Query: 222  accagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctcc 281
            |||||||||||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 3466 accagatggtgaacgccaccctgatgaacatcgcggacgcgcccaccaacgtgcagctcc 3525

                                                                        
Query: 282  ctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatt 341
            | || |||||||||||||||||||||||||| ||||||||| |||||||||| ||||| |
Sbjct: 3526 cggggatgtacaacaaggaggagaacccccgcgtgcccatcatcgtcaccggcaacgact 3585

                                                                        
Query: 342  tctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctc 401
            |||||||||| |||||||| ||||||||||| || || |||||||||||||||||||| |
Sbjct: 3586 tctcgacgctgtacgctcccctgatccgtgacgggcgcatggagaagttctactgggcgc 3645

                                                                        
Query: 402  ccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtg 461
            ||||||| || ||||| ||||| || |||||||| |||||||  |||||||| |||   |
Sbjct: 3646 ccacccgcgaggaccgcatcggcgtgtgcaagggcatcttccgcaccgacaacgtcccgg 3705

                                                                        
Query: 462  acgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtg 521
            ||||| | || || | | | || ||||||||||| || || ||||| ||||| ||||| |
Sbjct: 3706 acgaggccgtggtgaggctggtggacaccttcccggggcagtccatcgacttcttcggcg 3765

                                                           
Query: 522  ctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 568
            | ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 3766 cgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 3812



 Score =  214 bits (108), Expect = 3e-52
 Identities = 108/108 (100%)
 Strand = Plus / Plus

                                                                        
Query: 509  gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 568
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7021 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080

                                                            
Query: 569  tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggac 616
            ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7081 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggac 7128



 Score =  174 bits (88), Expect = 2e-40
 Identities = 88/88 (100%)
 Strand = Plus / Plus

                                                                        
Query: 6    agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 65
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6070 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 6129

                                        
Query: 66   agcttgtgttcgccaagatgggcatcaa 93
            ||||||||||||||||||||||||||||
Sbjct: 6130 agcttgtgttcgccaagatgggcatcaa 6157



 Score =  119 bits (60), Expect = 1e-23
 Identities = 81/88 (92%)
 Strand = Plus / Plus

                                                                        
Query: 14   ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 73
            |||||| |||||||||||||||||||||| || || || || |||||||||||||| |||
Sbjct: 3204 ctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtg 3263

                                        
Query: 74   ttcgccaagatgggcatcaaccccatca 101
            ||||||||||||||||||||||||||||
Sbjct: 3264 ttcgccaagatgggcatcaaccccatca 3291

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  700 bits (353), Expect = 0.0
 Identities = 478/520 (91%)
 Strand = Plus / Plus

                                                                        
Query: 97   catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 156
            |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 657  catcaggcagcggtaccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcct 716

                                                                        
Query: 157  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
            |||||||||||| || ||||| || |||||| |||||||||| ||||| |||||||||||
Sbjct: 717  cttcatcaacgacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgt 776

                                                                        
Query: 217  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
             ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 777  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacgcgcccaccaacgtgca 836

                                                                        
Query: 277  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
            |||||| || ||||||||||||||||||||||||||||| |||||| |||||||||| ||
Sbjct: 837  gctcccggggatgtacaacaaggaggagaacccccgtgtccccatcatcgtcaccggcaa 896

                                                                        
Query: 337  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
            ||| ||||||||||| ||||| || || |||||||| |||||||||||||||||||||||
Sbjct: 897  cgacttctcgacgctgtacgcgcccctcatccgtgacggtcgtatggagaagttctactg 956

                                                                        
Query: 397  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 456
            ||| |||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 957  ggcgcccacccgcgaggaccgtatcggcgtctgcaagggtatcttccagaccgacaacgt 1016

                                                                        
Query: 457  cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgacttttt 516
            ||| ||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||
Sbjct: 1017 cagcgacgagtctgtcgtcaagatcgtcgacacnttcccaggacagtccatcgacttctt 1076

                                                                        
Query: 517  cggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccgg 576
            ||||||||||||||||||||||||||||| ||||||||||||||||||    || |||||
Sbjct: 1077 cggtgctctgcgtgctcgggtgtacgacgttgaggtgcgcaagtgggtgtcgtccaccgg 1136

                                                    
Query: 577  aatcgagaacattggcaagaggctggtgaactcgcgggac 616
            ||| |||||||| |||||||||||||||||||||||||||
Sbjct: 1137 aattgagaacatcggcaagaggctggtgaactcgcgggac 1176



 Score =  143 bits (72), Expect = 8e-31
 Identities = 90/96 (93%)
 Strand = Plus / Plus

                                                                       
Query: 6   agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 65
           ||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||||||
Sbjct: 509 agatcccactcatcttgggtatctggggaggaaagggtcaggggaaatccttccagtgtg 568

                                               
Query: 66  agcttgtgttcgccaagatgggcatcaaccccatca 101
           ||||||| ||||||||||||||||||||||| ||||
Sbjct: 569 agcttgtcttcgccaagatgggcatcaacccaatca 604

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  652 bits (329), Expect = 0.0
 Identities = 472/520 (90%)
 Strand = Plus / Plus

                                                                        
Query: 97   catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 156
            |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 667  catcaggcagcggtaccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcct 726

                                                                        
Query: 157  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
            |||||||||||| || ||||| || |||||| |||||||||| ||||| |||||||||||
Sbjct: 727  cttcatcaacgacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgt 786

                                                                        
Query: 217  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
             ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 787  gaacaaccagatggtgaacgccaccctgatgaacatcgccgacgcgcccaccaacgtgca 846

                                                                        
Query: 277  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
            ||| || || ||||||||||||||||||||||||||||| |||||  | |||||||| ||
Sbjct: 847  gcttccggggatgtacaacaaggaggagaacccccgtgttcccattatngtcaccggcaa 906

                                                                        
Query: 337  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
            ||| || |||||||| ||||| || || || | ||| ||||||||||||||||| |||||
Sbjct: 907  cgacttttcgacgctgtacgccccccttattcctgacggtcgtatggagaagttttactg 966

                                                                        
Query: 397  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 456
            ||| |||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 967  ggcgcccacccgcgaggaccgtatcggcgtctgcaagggtatcttccagaccgacaacgt 1026

                                                                        
Query: 457  cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgacttttt 516
            ||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||
Sbjct: 1027 cagcgacgagtctgtcgtcaagatcgtcgacaccttcccaggacagtccatcgacttctt 1086

                                                                        
Query: 517  cggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccgg 576
            |||||||||||||||||||||||||||||| |||||||||||||||||    || |||||
Sbjct: 1087 cggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgtcgtccaccgg 1146

                                                    
Query: 577  aatcgagaacattggcaagaggctggtgaactcgcgggac 616
            ||| |||||||| |||||||||||||||||||||||||||
Sbjct: 1147 aattgagaacatcggcaagaggctggtgaactcgcgggac 1186



 Score =  143 bits (72), Expect = 8e-31
 Identities = 90/96 (93%)
 Strand = Plus / Plus

                                                                       
Query: 6   agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 65
           ||||||||||||||||||||||||||||||| |||||||| || ||||| ||||||||||
Sbjct: 519 agatcccactcatcttgggtatctggggaggaaagggtcaggggaaatccttccagtgtg 578

                                               
Query: 66  agcttgtgttcgccaagatgggcatcaaccccatca 101
           ||||||| ||||||||||||||||||||||| ||||
Sbjct: 579 agcttgtcttcgccaagatgggcatcaacccaatca 614

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  505 bits (255), Expect = e-140
 Identities = 300/315 (95%)
 Strand = Plus / Plus

                                                                       
Query: 302 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 361
           |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 1   gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 60

                                                                       
Query: 362 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 421
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatc 120

                                                                       
Query: 422 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 481
           |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 121 ggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaagatc 180

                                                                       
Query: 482 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 541
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgacaccttcccaggacaatccatcgactttttcggtgctctgcgtgctcgggtgtac 240

                                                                       
Query: 542 gacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctg 601
           ||||| |||||||||||||||||   ||||||||| ||||||||||||||||||| ||||
Sbjct: 241 gacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacattggcaagaagctg 300

                          
Query: 602 gtgaactcgcgggac 616
           |||||||||||||||
Sbjct: 301 gtgaactcgcgggac 315

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  498 bits (251), Expect = e-137
 Identities = 413/467 (88%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
            ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 651  atcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctc 710

                                                                        
Query: 158  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
            |||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || 
Sbjct: 711  ttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 770

                                                                        
Query: 218  aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
            |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||
Sbjct: 771  aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcag 830

                                                                        
Query: 278  ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
            |||||||| ||||||||||||||||| ||||||||||| |||||| |||||||||| |||
Sbjct: 831  ctccctgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaac 890

                                                                        
Query: 338  gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
            || ||||| ||||| ||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 891  gacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgg 950

                                                                        
Query: 398  gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 457
            ||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||
Sbjct: 951  gctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtc 1010

                                                                        
Query: 458  agtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttc 517
               ||||||    |||||||||||||||||| ||||||||| |||||||| || || |||
Sbjct: 1011 cccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttc 1070

                                                           
Query: 518  ggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
            || ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1071 ggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1117



 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
           ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 505 tcccactcatcctgggtatctggggaggcaagggtcagggaaaatccttccagtgtgagc 564

                                            
Query: 69  ttgtgttcgccaagatgggcatcaaccccatca 101
           | || |||||||||||||| |||||||||||||
Sbjct: 565 tcgtcttcgccaagatggggatcaaccccatca 597



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1134 gagaacattggcaagaggctggtgaactcgaggga 1168

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  490 bits (247), Expect = e-135
 Identities = 412/467 (88%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
            ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 620  atcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctc 679

                                                                        
Query: 158  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
            |||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || 
Sbjct: 680  ttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 739

                                                                        
Query: 218  aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
            |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||
Sbjct: 740  aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcag 799

                                                                        
Query: 278  ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
            ||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |||
Sbjct: 800  ctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaac 859

                                                                        
Query: 338  gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
            || ||||| ||||| ||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 860  gacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgg 919

                                                                        
Query: 398  gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 457
            ||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||
Sbjct: 920  gctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtc 979

                                                                        
Query: 458  agtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttc 517
               ||||||    |||||||||||||||||| ||||||||| |||||||| || || |||
Sbjct: 980  cccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttc 1039

                                                           
Query: 518  ggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
            || ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1040 ggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1086



 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
           ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 477 tcccactcatcctgggtatctggggaggcaagggtcagggaaaatccttccagtgtgagc 536

                                            
Query: 69  ttgtgttcgccaagatgggcatcaaccccatca 101
           | || |||||||||||||| |||||||||||||
Sbjct: 537 tcgtcttcgccaagatggggatcaaccccatca 569



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1103 gagaacattggcaagaggctggtgaactcgaggga 1137

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  490 bits (247), Expect = e-135
 Identities = 412/467 (88%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
            ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 615  atcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctc 674

                                                                        
Query: 158  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
            |||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || 
Sbjct: 675  ttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 734

                                                                        
Query: 218  aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
            |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||
Sbjct: 735  aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcag 794

                                                                        
Query: 278  ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
            ||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |||
Sbjct: 795  ctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaac 854

                                                                        
Query: 338  gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
            || ||||| ||||| ||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 855  gacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgg 914

                                                                        
Query: 398  gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 457
            ||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||
Sbjct: 915  gctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtc 974

                                                                        
Query: 458  agtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttc 517
               ||||||    |||||||||||||||||| ||||||||| |||||||| || || |||
Sbjct: 975  cccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttc 1034

                                                           
Query: 518  ggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
            || ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1035 ggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1081



 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
           ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 469 tcccactcatcctgggtatctggggaggcaagggtcagggaaaatccttccagtgtgagc 528

                                            
Query: 69  ttgtgttcgccaagatgggcatcaaccccatca 101
           | || |||||||||||||| |||||||||||||
Sbjct: 529 tcgtcttcgccaagatggggatcaaccccatca 561



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1098 gagaacattggcaagaggctggtgaactcgaggga 1132

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  490 bits (247), Expect = e-135
 Identities = 412/467 (88%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
            ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 663  atcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctc 722

                                                                        
Query: 158  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
            |||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || 
Sbjct: 723  ttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 782

                                                                        
Query: 218  aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
            |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||
Sbjct: 783  aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcag 842

                                                                        
Query: 278  ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
            ||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |||
Sbjct: 843  ctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaac 902

                                                                        
Query: 338  gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
            || ||||| ||||| ||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 903  gacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgg 962

                                                                        
Query: 398  gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 457
            ||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||
Sbjct: 963  gctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtc 1022

                                                                        
Query: 458  agtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttc 517
               ||||||    |||||||||||||||||| ||||||||| |||||||| || || |||
Sbjct: 1023 cccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttc 1082

                                                           
Query: 518  ggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
            || ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1083 ggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1129



 Score =  129 bits (65), Expect = 1e-26
 Identities = 86/93 (92%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
           ||||||||| | ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 517 tcccactcaccctgggtatctggggaggcaagggtcagggaaaatccttccagtgtgagc 576

                                            
Query: 69  ttgtgttcgccaagatgggcatcaaccccatca 101
           | || |||||||||||||| |||||||||||||
Sbjct: 577 tcgtcttcgccaagatggggatcaaccccatca 609



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1146 gagaacattggcaagaggctggtgaactcgaggga 1180

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  490 bits (247), Expect = e-135
 Identities = 412/467 (88%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
            ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 614  atcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctc 673

                                                                        
Query: 158  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
            |||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || 
Sbjct: 674  ttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 733

                                                                        
Query: 218  aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
            |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||
Sbjct: 734  aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcag 793

                                                                        
Query: 278  ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
            ||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |||
Sbjct: 794  ctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaac 853

                                                                        
Query: 338  gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
            || ||||| ||||| ||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 854  gacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgg 913

                                                                        
Query: 398  gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 457
            ||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||
Sbjct: 914  gctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtc 973

                                                                        
Query: 458  agtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttc 517
               ||||||    |||||||||||||||||| ||||||||| |||||||| || || |||
Sbjct: 974  cccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttc 1033

                                                           
Query: 518  ggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
            || ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1034 ggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1080



 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
           ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 468 tcccactcatcctgggtatctggggaggcaagggtcagggaaaatccttccagtgtgagc 527

                                            
Query: 69  ttgtgttcgccaagatgggcatcaaccccatca 101
           | || |||||||||||||| |||||||||||||
Sbjct: 528 tcgtcttcgccaagatggggatcaaccccatca 560



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1097 gagaacattggcaagaggctggtgaactcgaggga 1131

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  490 bits (247), Expect = e-135
 Identities = 412/467 (88%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
            ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 652  atcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctc 711

                                                                        
Query: 158  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
            |||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || 
Sbjct: 712  ttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 771

                                                                        
Query: 218  aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
            |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||
Sbjct: 772  aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcag 831

                                                                        
Query: 278  ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
            ||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |||
Sbjct: 832  ctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaac 891

                                                                        
Query: 338  gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
            || ||||| ||||| ||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 892  gacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgg 951

                                                                        
Query: 398  gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 457
            ||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||
Sbjct: 952  gctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtc 1011

                                                                        
Query: 458  agtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttc 517
               ||||||    |||||||||||||||||| ||||||||| |||||||| || || |||
Sbjct: 1012 cccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttc 1071

                                                           
Query: 518  ggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
            || ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1072 ggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1118



 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
           ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 506 tcccactcatcctgggtatctggggaggcaagggtcagggaaaatccttccagtgtgagc 565

                                            
Query: 69  ttgtgttcgccaagatgggcatcaaccccatca 101
           | || |||||||||||||| |||||||||||||
Sbjct: 566 tcgtcttcgccaagatggggatcaaccccatca 598



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1135 gagaacattggcaagaggctggtgaactcgaggga 1169

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  490 bits (247), Expect = e-135
 Identities = 412/467 (88%)
 Strand = Plus / Plus

                                                                       
Query: 98  atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
           ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 435 atcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctc 494

                                                                       
Query: 158 ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
           |||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || 
Sbjct: 495 ttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 554

                                                                       
Query: 218 aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
           |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||
Sbjct: 555 aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcag 614

                                                                       
Query: 278 ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
           ||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |||
Sbjct: 615 ctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaac 674

                                                                       
Query: 338 gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
           || ||||| ||||| ||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 675 gacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgg 734

                                                                       
Query: 398 gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 457
           ||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||
Sbjct: 735 gctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtc 794

                                                                       
Query: 458 agtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttc 517
              ||||||    |||||||||||||||||| ||||||||| |||||||| || || |||
Sbjct: 795 cccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttc 854

                                                          
Query: 518 ggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
           || ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 855 ggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 901



 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
           ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 289 tcccactcatcctgggtatctggggaggcaagggtcagggaaaatccttccagtgtgagc 348

                                            
Query: 69  ttgtgttcgccaagatgggcatcaaccccatca 101
           | || |||||||||||||| |||||||||||||
Sbjct: 349 tcgtcttcgccaagatggggatcaaccccatca 381



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 581 gagaacattggcaagaggctggtgaactcgcggga 615
           |||||||||||||||||||||||||||||| ||||
Sbjct: 918 gagaacattggcaagaggctggtgaactcgaggga 952

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  490 bits (247), Expect = e-135
 Identities = 412/467 (88%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
            ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 656  atcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctc 715

                                                                        
Query: 158  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
            |||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || 
Sbjct: 716  ttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 775

                                                                        
Query: 218  aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
            |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||
Sbjct: 776  aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcag 835

                                                                        
Query: 278  ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
            ||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |||
Sbjct: 836  ctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaac 895

                                                                        
Query: 338  gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
            || ||||| ||||| ||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 896  gacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgg 955

                                                                        
Query: 398  gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 457
            ||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||
Sbjct: 956  gctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtc 1015

                                                                        
Query: 458  agtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttc 517
               ||||||    |||||||||||||||||| ||||||||| |||||||| || || |||
Sbjct: 1016 cccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttc 1075

                                                           
Query: 518  ggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
            || ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1076 ggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1122



 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
           ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 510 tcccactcatcctgggtatctggggaggcaagggtcagggaaaatccttccagtgtgagc 569

                                            
Query: 69  ttgtgttcgccaagatgggcatcaaccccatca 101
           | || |||||||||||||| |||||||||||||
Sbjct: 570 tcgtcttcgccaagatggggatcaaccccatca 602



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1139 gagaacattggcaagaggctggtgaactcgaggga 1173

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  490 bits (247), Expect = e-135
 Identities = 412/467 (88%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
            ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 650  atcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctc 709

                                                                        
Query: 158  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
            |||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || 
Sbjct: 710  ttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 769

                                                                        
Query: 218  aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
            |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||
Sbjct: 770  aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcag 829

                                                                        
Query: 278  ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
            ||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |||
Sbjct: 830  ctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaac 889

                                                                        
Query: 338  gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
            || ||||| ||||| ||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 890  gacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgg 949

                                                                        
Query: 398  gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 457
            ||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||
Sbjct: 950  gctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtc 1009

                                                                        
Query: 458  agtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttc 517
               ||||||    |||||||||||||||||| ||||||||| |||||||| || || |||
Sbjct: 1010 cccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttc 1069

                                                           
Query: 518  ggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
            || ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1070 ggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1116



 Score =  137 bits (69), Expect = 5e-29
 Identities = 87/93 (93%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
           ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 504 tcccactcatcctgggtatctggggaggcaagggtcagggaaaatccttccagtgtgagc 563

                                            
Query: 69  ttgtgttcgccaagatgggcatcaaccccatca 101
           | || |||||||||||||| |||||||||||||
Sbjct: 564 tcgtcttcgccaagatggggatcaaccccatca 596



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                               
Query: 581  gagaacattggcaagaggctggtgaactcgcggga 615
            |||||||||||||||||||||||||||||| ||||
Sbjct: 1133 gagaacattggcaagaggctggtgaactcgaggga 1167

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  448 bits (226), Expect = e-122
 Identities = 364/410 (88%)
 Strand = Plus / Minus

                                                                          
Query: 98     atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
              ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 109097 atcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctc 109038

                                                                          
Query: 158    ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
              |||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || 
Sbjct: 109037 ttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 108978

                                                                          
Query: 218    aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
              |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||
Sbjct: 108977 aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcag 108918

                                                                          
Query: 278    ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
              ||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |||
Sbjct: 108917 ctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaac 108858

                                                                          
Query: 338    gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
              || ||||| ||||| ||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 108857 gacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgg 108798

                                                                          
Query: 398    gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 457
              ||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||
Sbjct: 108797 gctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtc 108738

                                                                
Query: 458    agtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 507
                 ||||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 108737 cccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 108688



 Score =  121 bits (61), Expect = 3e-24
 Identities = 79/85 (92%)
 Strand = Plus / Minus

                                                                          
Query: 9      tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
              ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 109328 tcccactcatcctgggtatctggggaggcaagggtcagggaaaatccttccagtgtgagc 109269

                                       
Query: 69     ttgtgttcgccaagatgggcatcaa 93
              | || |||||||||||||| |||||
Sbjct: 109268 tcgtcttcgccaagatggggatcaa 109244



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                          
Query: 193    gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 252
              |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 112679 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 112620

                                                         
Query: 253    cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 295
              ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 112619 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 112577



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                          
Query: 102    ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 161
              ||||||||||||| ||||| || ||||||||||| ||||| |||||||||   || ||||
Sbjct: 112756 ggcagcggtaccgcgaggcggcggacatgatcaacaaggggaagatgtgcgtgctgttca 112697

                              
Query: 162    tcaacgatcttgacgc 177
              ||||||| || |||||
Sbjct: 112696 tcaacgacctggacgc 112681



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                 
Query: 581    gagaacattggcaagaggctggtgaactcgcggga 615
              |||||||||||||||||||||||||||||| ||||
Sbjct: 108522 gagaacattggcaagaggctggtgaactcgaggga 108488



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                          
Query: 380    atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 439
              ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 112460

                  
Query: 440    ttcc 443
              ||||
Sbjct: 112459 ttcc 112456



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 515    ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
              ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 108588 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 108539



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 56     ttccagtgtgagcttgtgttcgccaagatgggcatcaa 93
              ||||||||||| || || |||||||||||||| |||||
Sbjct: 112906 ttccagtgtgatctcgtcttcgccaagatggggatcaa 112869



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 581    gagaacattggcaagaggctggtgaactc 609
              |||||||| |||| |||||||||||||||
Sbjct: 112352 gagaacatcggcaggaggctggtgaactc 112324

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  448 bits (226), Expect = e-122
 Identities = 364/410 (88%)
 Strand = Plus / Minus

                                                                         
Query: 98    atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
             ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 30974 atcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctc 30915

                                                                         
Query: 158   ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
             |||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || 
Sbjct: 30914 ttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 30855

                                                                         
Query: 218   aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
             |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||
Sbjct: 30854 aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcag 30795

                                                                         
Query: 278   ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
             ||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |||
Sbjct: 30794 ctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaac 30735

                                                                         
Query: 338   gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
             || ||||| ||||| ||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 30734 gacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgg 30675

                                                                         
Query: 398   gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 457
             ||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||
Sbjct: 30674 gctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtc 30615

                                                               
Query: 458   agtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 507
                ||||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 30614 cccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 30565



 Score =  121 bits (61), Expect = 3e-24
 Identities = 79/85 (92%)
 Strand = Plus / Minus

                                                                         
Query: 9     tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
             ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 31205 tcccactcatcctgggtatctggggaggcaagggtcagggaaaatccttccagtgtgagc 31146

                                      
Query: 69    ttgtgttcgccaagatgggcatcaa 93
             | || |||||||||||||| |||||
Sbjct: 31145 tcgtcttcgccaagatggggatcaa 31121



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                         
Query: 193   gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 252
             |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 34556 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 34497

                                                        
Query: 253   cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 295
             ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 34496 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 34454



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                         
Query: 102   ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 161
             ||||||||||||| ||||| || ||||||||||| ||||| |||||||||   || ||||
Sbjct: 34633 ggcagcggtaccgcgaggcggcggacatgatcaacaaggggaagatgtgcgtgctgttca 34574

                             
Query: 162   tcaacgatcttgacgc 177
             ||||||| || |||||
Sbjct: 34573 tcaacgacctggacgc 34558



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                
Query: 581   gagaacattggcaagaggctggtgaactcgcggga 615
             |||||||||||||||||||||||||||||| ||||
Sbjct: 30399 gagaacattggcaagaggctggtgaactcgaggga 30365



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 380   atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 439
             ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 34337

                 
Query: 440   ttcc 443
             ||||
Sbjct: 34336 ttcc 34333



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 515   ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
             ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 30465 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 30416



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 56    ttccagtgtgagcttgtgttcgccaagatgggcatcaa 93
             ||||||||||| || || |||||||||||||| |||||
Sbjct: 34783 ttccagtgtgatctcgtcttcgccaagatggggatcaa 34746



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 581   gagaacattggcaagaggctggtgaactc 609
             |||||||| |||| |||||||||||||||
Sbjct: 34229 gagaacatcggcaggaggctggtgaactc 34201

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  448 bits (226), Expect = e-122
 Identities = 364/410 (88%)
 Strand = Plus / Minus

                                                                            
Query: 98       atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
                ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 28304236 atcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctc 28304177

                                                                            
Query: 158      ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
                |||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || 
Sbjct: 28304176 ttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 28304117

                                                                            
Query: 218      aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
                |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||
Sbjct: 28304116 aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcag 28304057

                                                                            
Query: 278      ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
                ||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |||
Sbjct: 28304056 ctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaac 28303997

                                                                            
Query: 338      gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
                || ||||| ||||| ||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 28303996 gacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgg 28303937

                                                                            
Query: 398      gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 457
                ||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||
Sbjct: 28303936 gctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtc 28303877

                                                                  
Query: 458      agtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 507
                   ||||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 28303876 cccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 28303827



 Score =  121 bits (61), Expect = 3e-24
 Identities = 79/85 (92%)
 Strand = Plus / Minus

                                                                            
Query: 9        tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
                ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 28304467 tcccactcatcctgggtatctggggaggcaagggtcagggaaaatccttccagtgtgagc 28304408

                                         
Query: 69       ttgtgttcgccaagatgggcatcaa 93
                | || |||||||||||||| |||||
Sbjct: 28304407 tcgtcttcgccaagatggggatcaa 28304383



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                            
Query: 193      gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 252
                |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 28307818 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28307759

                                                           
Query: 253      cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 295
                ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 28307758 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28307716



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                            
Query: 102      ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 161
                ||||||||||||| ||||| || ||||||||||| ||||| |||||||||   || ||||
Sbjct: 28307895 ggcagcggtaccgcgaggcggcggacatgatcaacaaggggaagatgtgcgtgctgttca 28307836

                                
Query: 162      tcaacgatcttgacgc 177
                ||||||| || |||||
Sbjct: 28307835 tcaacgacctggacgc 28307820



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 581      gagaacattggcaagaggctggtgaactcgcggga 615
                |||||||||||||||||||||||||||||| ||||
Sbjct: 28303661 gagaacattggcaagaggctggtgaactcgaggga 28303627



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 380      atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 439
                ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28307599

                    
Query: 440      ttcc 443
                ||||
Sbjct: 28307598 ttcc 28307595



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 515      ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
                ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 28303727 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28303678



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 56       ttccagtgtgagcttgtgttcgccaagatgggcatcaa 93
                ||||||||||| || || |||||||||||||| |||||
Sbjct: 28308045 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28308008



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 581      gagaacattggcaagaggctggtgaactc 609
                |||||||| |||| |||||||||||||||
Sbjct: 28307491 gagaacatcggcaggaggctggtgaactc 28307463

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  448 bits (226), Expect = e-122
 Identities = 364/410 (88%)
 Strand = Plus / Minus

                                                                            
Query: 98       atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
                ||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||
Sbjct: 28286685 atcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctc 28286626

                                                                            
Query: 158      ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
                |||||||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || 
Sbjct: 28286625 ttcatcaacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtg 28286566

                                                                            
Query: 218      aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
                |||||||||||||||||||||||||||||||||||||||||   ||| ||||||||||||
Sbjct: 28286565 aacaaccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcag 28286506

                                                                            
Query: 278      ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
                ||||| || ||||||||||||||||| ||||||||||| |||||| |||||||||| |||
Sbjct: 28286505 ctccccgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaac 28286446

                                                                            
Query: 338      gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
                || ||||| ||||| ||||| || || |||||||| || |||||||||||||||||||||
Sbjct: 28286445 gacttctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgg 28286386

                                                                            
Query: 398      gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtc 457
                ||||||||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||
Sbjct: 28286385 gctcccacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtc 28286326

                                                                  
Query: 458      agtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 507
                   ||||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 28286325 cccgacgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 28286276



 Score =  121 bits (61), Expect = 3e-24
 Identities = 79/85 (92%)
 Strand = Plus / Minus

                                                                            
Query: 9        tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
                ||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 28286916 tcccactcatcctgggtatctggggaggcaagggtcagggaaaatccttccagtgtgagc 28286857

                                         
Query: 69       ttgtgttcgccaagatgggcatcaa 93
                | || |||||||||||||| |||||
Sbjct: 28286856 tcgtcttcgccaagatggggatcaa 28286832



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                            
Query: 193      gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 252
                |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 28290267 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28290208

                                                           
Query: 253      cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 295
                ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 28290207 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28290165



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 65/76 (85%)
 Strand = Plus / Minus

                                                                            
Query: 102      ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 161
                ||||||||||||| ||||| || ||||||||||| ||||| |||||||||   || ||||
Sbjct: 28290344 ggcagcggtaccgcgaggcggcggacatgatcaacaaggggaagatgtgcgtgctgttca 28290285

                                
Query: 162      tcaacgatcttgacgc 177
                ||||||| || |||||
Sbjct: 28290284 tcaacgacctggacgc 28290269



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                                   
Query: 581      gagaacattggcaagaggctggtgaactcgcggga 615
                |||||||||||||||||||||||||||||| ||||
Sbjct: 28286110 gagaacattggcaagaggctggtgaactcgaggga 28286076



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 380      atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 439
                ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 28290107 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28290048

                    
Query: 440      ttcc 443
                ||||
Sbjct: 28290047 ttcc 28290044



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 515      ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 564
                ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 28286176 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28286127



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 56       ttccagtgtgagcttgtgttcgccaagatgggcatcaa 93
                ||||||||||| || || |||||||||||||| |||||
Sbjct: 28290494 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28290457



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 581      gagaacattggcaagaggctggtgaactc 609
                |||||||| |||| |||||||||||||||
Sbjct: 28289940 gagaacatcggcaggaggctggtgaactc 28289912

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  434 bits (219), Expect = e-118
 Identities = 405/467 (86%)
 Strand = Plus / Plus

                                                                        
Query: 102  ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 161
            ||||| ||||||| ||||| || ||||| ||||| ||||| |||||||||||||||||||
Sbjct: 777  ggcagaggtaccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttca 836

                                                                        
Query: 162  tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 221
            ||||||| || ||||| || |||||  |||||||||| || ||||||||||| || ||||
Sbjct: 837  tcaacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtgaaca 896

                                                                        
Query: 222  accagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctcc 281
            |||||||||||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 897  accagatggtgaacgccaccctgatgaacatcgcggacgcgcccaccaacgtgcagctcc 956

                                                                        
Query: 282  ctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatt 341
            | || |||||||||||||||||||||||||| ||||||||| |||||||||| ||||| |
Sbjct: 957  cggggatgtacaacaaggaggagaacccccgcgtgcccatcatcgtcaccggcaacgact 1016

                                                                        
Query: 342  tctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctc 401
            |||||||||| |||||||| ||||||||||| || || |||||||||||||||||||| |
Sbjct: 1017 tctcgacgctgtacgctcccctgatccgtgacgggcgcatggagaagttctactgggcgc 1076

                                                                        
Query: 402  ccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtg 461
            ||||||| || ||||| ||||| || |||||||| |||||||  |||||||| |||   |
Sbjct: 1077 ccacccgcgaggaccgcatcggcgtgtgcaagggcatcttccgcaccgacaacgtcccgg 1136

                                                                        
Query: 462  acgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtg 521
            ||||| | || || | | | || ||||||||||| || || ||||| ||||| ||||| |
Sbjct: 1137 acgaggccgtggtgaggctggtggacaccttcccggggcagtccatcgacttcttcggcg 1196

                                                           
Query: 522  ctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 568
            | ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 1197 cgctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 1243



 Score =  119 bits (60), Expect = 1e-23
 Identities = 81/88 (92%)
 Strand = Plus / Plus

                                                                       
Query: 14  ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 73
           |||||| |||||||||||||||||||||| || || || || |||||||||||||| |||
Sbjct: 635 ctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgtgagctggtg 694

                                       
Query: 74  ttcgccaagatgggcatcaaccccatca 101
           ||||||||||||||||||||||||||||
Sbjct: 695 ttcgccaagatgggcatcaaccccatca 722

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  414 bits (209), Expect = e-112
 Identities = 398/461 (86%)
 Strand = Plus / Plus

                                                                       
Query: 102 ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 161
           ||||||||||||||||||| || ||||| |||| |||||| |||||||||||||||||||
Sbjct: 313 ggcagcggtaccgtgaggccgccgacatcatcaggaaggggaagatgtgctgcctcttca 372

                                                                       
Query: 162 tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 221
           |||||||||| || || ||||| ||  |||||||||| ||||| ||||||||||||||||
Sbjct: 373 tcaacgatctcgatgccggtgccggccggatgggcggcaccacccagtacaccgtcaaca 432

                                                                       
Query: 222 accagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctcc 281
           |||||||||||||||||||||| ||||||||||||||   |||||||||||| |||||||
Sbjct: 433 accagatggtgaacgccaccctcatgaacatcgccgacaaccccaccaacgtccagctcc 492

                                                                       
Query: 282 ctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatt 341
           | ||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||| |
Sbjct: 493 ccggcatgtacaacaagcaggagaacccccgcgtgcccatcatcgtcaccggcaacgact 552

                                                                       
Query: 342 tctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctc 401
           |||| || |||||||| || || |||||||| ||||||||||||||||||||||||||||
Sbjct: 553 tctccaccctctacgcccccctcatccgtgacggtcgtatggagaagttctactgggctc 612

                                                                       
Query: 402 ccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtg 461
           ||||| | || |||||  |||| |||||||  |||||||||  | ||||||| |||    
Sbjct: 613 ccaccagggatgaccgggtcggcgtctgcaccggtatcttcaggtccgacaacgtcccca 672

                                                                       
Query: 462 acgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtg 521
           | |||  |||| ||||| |||||||||||||||| || |||||||||||||| |||||||
Sbjct: 673 aggaggatgtcatcaagctcgtcgacaccttccccggccaatccattgacttcttcggtg 732

                                                    
Query: 522 ctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 562
           | ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 733 cactgagggcgagggtctacgacgacgaggtgaggaagtgg 773



 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                       
Query: 14  ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 73
           ||||| |||||||||||||||||||| ||||| || ||||| ||||| ||||| ||||||
Sbjct: 168 ctcattttgggtatctggggaggcaaaggtcaggggaaatccttccaatgtgaacttgtg 227

                                       
Query: 74  ttcgccaagatgggcatcaaccccatca 101
           |||||||||||||| |||||||||||||
Sbjct: 228 ttcgccaagatgggaatcaaccccatca 255



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 590 ggcaagaggctggtgaactcgc 611
           ||||||||||||||||||||||
Sbjct: 801 ggcaagaggctggtgaactcgc 822

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  414 bits (209), Expect = e-112
 Identities = 398/461 (86%)
 Strand = Plus / Plus

                                                                       
Query: 102 ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 161
           ||||||||||||||||||| || ||||| |||| |||||| |||||||||||||||||||
Sbjct: 507 ggcagcggtaccgtgaggccgccgacatcatcaggaaggggaagatgtgctgcctcttca 566

                                                                       
Query: 162 tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 221
           |||||||||| || || ||||| ||  |||||||||| ||||| ||||||||||||||||
Sbjct: 567 tcaacgatctcgatgccggtgccggccggatgggcggcaccacccagtacaccgtcaaca 626

                                                                       
Query: 222 accagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctcc 281
           |||||||||||||||||||||| ||||||||||||||   |||||||||||| |||||||
Sbjct: 627 accagatggtgaacgccaccctcatgaacatcgccgacaaccccaccaacgtccagctcc 686

                                                                       
Query: 282 ctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatt 341
           | ||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||| |
Sbjct: 687 ccggcatgtacaacaagcaggagaacccccgcgtgcccatcatcgtcaccggcaacgact 746

                                                                       
Query: 342 tctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctc 401
           |||| || |||||||| || || |||||||| ||||||||||||||||||||||||||||
Sbjct: 747 tctccaccctctacgcccccctcatccgtgacggtcgtatggagaagttctactgggctc 806

                                                                       
Query: 402 ccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtg 461
           ||||| | || |||||  |||| |||||||  |||||||||  | ||||||| |||    
Sbjct: 807 ccaccagggatgaccgggtcggcgtctgcaccggtatcttcaggtccgacaacgtcccca 866

                                                                       
Query: 462 acgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtg 521
           | |||  |||| ||||| |||||||||||||||| || |||||||||||||| |||||||
Sbjct: 867 aggaggatgtcatcaagctcgtcgacaccttccccggccaatccattgacttcttcggtg 926

                                                    
Query: 522 ctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 562
           | ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 927 cactgagggcgagggtctacgacgacgaggtgaggaagtgg 967



 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                       
Query: 14  ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 73
           ||||| |||||||||||||||||||| ||||| || ||||| ||||| ||||| ||||||
Sbjct: 362 ctcattttgggtatctggggaggcaaaggtcaggggaaatccttccaatgtgaacttgtg 421

                                       
Query: 74  ttcgccaagatgggcatcaaccccatca 101
           |||||||||||||| |||||||||||||
Sbjct: 422 ttcgccaagatgggaatcaaccccatca 449



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 590  ggcaagaggctggtgaactcgc 611
            ||||||||||||||||||||||
Sbjct: 995  ggcaagaggctggtgaactcgc 1016

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  410 bits (207), Expect = e-111
 Identities = 402/467 (86%)
 Strand = Plus / Plus

                                                                        
Query: 102  ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 161
            ||||| ||||||| |||||||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 627  ggcagaggtaccgcgaggctgccgacattatcaagaagggcaagatgtgctgcctcttca 686

                                                                        
Query: 162  tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 221
            ||||||| || ||||| || |||||  |||||||||| || ||||||||||| || ||||
Sbjct: 687  tcaacgacctggacgccggcgcggggcggatgggcgggacgacgcagtacacggtgaaca 746

                                                                        
Query: 222  accagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctcc 281
            |||||||||||||||||||||||||||||||||| || || ||||||||||||||| |||
Sbjct: 747  accagatggtgaacgccaccctgatgaacatcgcggacgcgcccaccaacgtgcagttcc 806

                                                                        
Query: 282  ctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatt 341
            | || ||||||||||||||||||||||| || ||||||||| |||||||||| ||||| |
Sbjct: 807  cggggatgtacaacaaggaggagaacccacgcgtgcccatcatcgtcaccggcaacgact 866

                                                                        
Query: 342  tctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctc 401
            |||||||||| ||||| || || ||||| || || || |||||||||||||||||||| |
Sbjct: 867  tctcgacgctgtacgcgcccctcatccgggacggccgcatggagaagttctactgggcgc 926

                                                                        
Query: 402  ccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtg 461
            ||||||| || ||||| ||||| || |||||||| |||||||  |||||||| |||   |
Sbjct: 927  ccacccgggaggaccgcatcggcgtgtgcaagggcatcttccgcaccgacaacgtccccg 986

                                                                        
Query: 462  acgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtg 521
            ||||| | || || | | | || ||||||||||| || || ||||| ||||| ||||| |
Sbjct: 987  acgaggccgtggtgaggctggtggacaccttcccggggcagtccatcgacttcttcggcg 1046

                                                           
Query: 522  ctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 568
            | ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 1047 cgctgcgggcgcgggtgtacgacgacgaggtgcgcaagtgggtcggc 1093



 Score =  113 bits (57), Expect = 7e-22
 Identities = 84/93 (90%)
 Strand = Plus / Plus

                                                                       
Query: 9   tcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagc 68
           |||| |||||| |||||||||||||||||||||| || || || || |||||||| ||||
Sbjct: 477 tccctctcatcctgggtatctggggaggcaagggacagggcaagtcgttccagtgcgagc 536

                                            
Query: 69  ttgtgttcgccaagatgggcatcaaccccatca 101
           | |||||||||||||||||||||||||||||||
Sbjct: 537 tggtgttcgccaagatgggcatcaaccccatca 569

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  406 bits (205), Expect = e-110
 Identities = 397/461 (86%)
 Strand = Plus / Plus

                                                                        
Query: 102  ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 161
            ||||||||||||||||||| || ||||| |||| |||||| |||||||||||||||||||
Sbjct: 614  ggcagcggtaccgtgaggccgccgacatcatcaggaaggggaagatgtgctgcctcttca 673

                                                                        
Query: 162  tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 221
            |||||||||| || || ||||| ||  |||||||||| ||||| ||||||||||||||||
Sbjct: 674  tcaacgatctcgatgccggtgccggccggatgggcggcaccacccagtacaccgtcaaca 733

                                                                        
Query: 222  accagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctcc 281
            |||||||||||||||||||||| ||||||||||||||   |||||||||||| |||||||
Sbjct: 734  accagatggtgaacgccaccctcatgaacatcgccgacaaccccaccaacgtccagctcc 793

                                                                        
Query: 282  ctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatt 341
            | ||||||||||||||| | ||||||||||| ||||||||| |||||||||| ||||| |
Sbjct: 794  ccggcatgtacaacaagcaagagaacccccgcgtgcccatcatcgtcaccggcaacgact 853

                                                                        
Query: 342  tctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctc 401
            |||| || |||||||| || || |||||||| ||||||||||||||||||||||||||||
Sbjct: 854  tctccaccctctacgcccccctcatccgtgacggtcgtatggagaagttctactgggctc 913

                                                                        
Query: 402  ccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtg 461
            ||||| | || |||||  |||| |||||||  |||||||||  | ||||||| |||    
Sbjct: 914  ccaccagggatgaccgggtcggcgtctgcaccggtatcttcaggtccgacaacgtcccca 973

                                                                        
Query: 462  acgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtg 521
            | |||  |||| ||||| |||||||||||||||| || |||||||||||||| |||||||
Sbjct: 974  aggaggatgtcatcaagctcgtcgacaccttccccggccaatccattgacttcttcggtg 1033

                                                     
Query: 522  ctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 562
            | ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 1034 cactgagggcgagggtctacgacgacgaggtgaggaagtgg 1074



 Score =  119 bits (60), Expect = 1e-23
 Identities = 81/88 (92%)
 Strand = Plus / Plus

                                                                       
Query: 14  ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 73
           ||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||
Sbjct: 469 ctcattttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtg 528

                                       
Query: 74  ttcgccaagatgggcatcaaccccatca 101
           |||||||||||||| |||||||||||||
Sbjct: 529 ttcgccaagatgggaatcaaccccatca 556

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  406 bits (205), Expect = e-110
 Identities = 397/461 (86%)
 Strand = Plus / Plus

                                                                       
Query: 102 ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 161
           ||||||||||||||||||| || ||||| |||| |||||| |||||||||||||||||||
Sbjct: 477 ggcagcggtaccgtgaggccgccgacatcatcaggaaggggaagatgtgctgcctcttca 536

                                                                       
Query: 162 tcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaaca 221
           |||||||||| || || ||||| ||  |||||||||| ||||| ||||||||||||||||
Sbjct: 537 tcaacgatctcgatgccggtgccggccggatgggcggcaccacccagtacaccgtcaaca 596

                                                                       
Query: 222 accagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctcc 281
           |||||||||||||||||||||| ||||||||||||||   |||||||||||| |||||||
Sbjct: 597 accagatggtgaacgccaccctcatgaacatcgccgacaaccccaccaacgtccagctcc 656

                                                                       
Query: 282 ctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatt 341
           | ||||||||||||||| | ||||||||||| ||||||||| |||||||||| ||||| |
Sbjct: 657 ccggcatgtacaacaagcaagagaacccccgcgtgcccatcatcgtcaccggcaacgact 716

                                                                       
Query: 342 tctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctc 401
           |||| || |||||||| || || |||||||| ||||||||||||||||||||||||||||
Sbjct: 717 tctccaccctctacgcccccctcatccgtgacggtcgtatggagaagttctactgggctc 776

                                                                       
Query: 402 ccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtg 461
           ||||| | || |||||  |||| |||||||  |||||||||  | ||||||| |||    
Sbjct: 777 ccaccagggatgaccgggtcggcgtctgcaccggtatcttcaggtccgacaacgtcccca 836

                                                                       
Query: 462 acgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtg 521
           | |||  |||| ||||| |||||||||||||||| || |||||||||||||| |||||||
Sbjct: 837 aggaggatgtcatcaagctcgtcgacaccttccccggccaatccattgacttcttcggtg 896

                                                    
Query: 522 ctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 562
           | ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 897 cactgagggcgagggtctacgacgacgaggtgaggaagtgg 937



 Score =  119 bits (60), Expect = 1e-23
 Identities = 81/88 (92%)
 Strand = Plus / Plus

                                                                       
Query: 14  ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 73
           ||||| |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||
Sbjct: 332 ctcattttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtg 391

                                       
Query: 74  ttcgccaagatgggcatcaaccccatca 101
           |||||||||||||| |||||||||||||
Sbjct: 392 ttcgccaagatgggaatcaaccccatca 419

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  357 bits (180), Expect = 3e-95
 Identities = 387/456 (84%)
 Strand = Plus / Plus

                                                                       
Query: 97  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 156
           |||||||||||| |||||||||||  | ||| | ||||||||||| ||||||| ||||||
Sbjct: 228 catcaggcagcgctaccgtgaggcctccgacctcatcaagaagggcaagatgtcctgcct 287

                                                                       
Query: 157 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
           ||||||||||||  | ||||| || |||||| | |||||||| ||||| |||||||| ||
Sbjct: 288 cttcatcaacgacttggacgccggcgcgggtcgcatgggcggcaccacccagtacacggt 347

                                                                       
Query: 217 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
            |||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 348 gaacaaccagatggtcaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 407

                                                                       
Query: 277 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
           |||||| || ||||||||||||||||| |||||||| ||||||||| |||||||||| ||
Sbjct: 408 gctcccggggatgtacaacaaggaggacaacccccgcgtgcccatcatcgtcaccggcaa 467

                                                                       
Query: 337 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
           ||| ||||| ||||||||||| || || ||||| || || || |||||||||||||||||
Sbjct: 468 cgacttctccacgctctacgcgccgctcatccgcgacggccgcatggagaagttctactg 527

                                                                       
Query: 397 ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 456
           ||| |||||||| || ||||| ||||| ||||||||||| |||||||  ||||||   ||
Sbjct: 528 ggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatcttccgcaccgacggcgt 587

                                                                       
Query: 457 cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgacttttt 516
           |   || |||   |||||| || | |||||||||||||| || || ||||| ||||| ||
Sbjct: 588 cgacgaggagcacgtcgtccagctggtcgacaccttccctggccagtccatcgacttctt 647

                                               
Query: 517 cggtgctctgcgtgctcgggtgtacgacgatgaggt 552
           ||| || |||||||| ||||| |||||||| |||||
Sbjct: 648 cggcgcgctgcgtgcccgggtctacgacgacgaggt 683



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 78/88 (88%)
 Strand = Plus / Plus

                                                                       
Query: 14  ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 73
           |||||| ||||||||||||||||||| || || |||||||| ||||| || ||||| || 
Sbjct: 88  ctcatcctgggtatctggggaggcaaaggccagggaaaatcgttccaatgcgagctggtc 147

                                       
Query: 74  ttcgccaagatgggcatcaaccccatca 101
           ||||||||||||||||||| ||||||||
Sbjct: 148 ttcgccaagatgggcatcacccccatca 175

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  349 bits (176), Expect = 7e-93
 Identities = 386/456 (84%)
 Strand = Plus / Plus

                                                                        
Query: 97   catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 156
            |||||||||||| |||||||||||  | ||| | ||||||||||| ||||||| ||||||
Sbjct: 623  catcaggcagcgctaccgtgaggcctccgacctcatcaagaagggcaagatgtcctgcct 682

                                                                        
Query: 157  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
            ||||||||||||  | ||||| || |||||| | |||||||| ||||| |||||||| ||
Sbjct: 683  cttcatcaacgacttggacgccggcgcgggtcgcatgggcggcaccacccagtacacggt 742

                                                                        
Query: 217  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
             |||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 743  gaacaaccagatggtcaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 802

                                                                        
Query: 277  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
            |||||| || ||||||||||||||||| |||||||| ||||||||| |||||||||| ||
Sbjct: 803  gctcccggggatgtacaacaaggaggacaacccccgcgtgcccatcatcgtcaccggcaa 862

                                                                        
Query: 337  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
            ||| ||||| ||||||||||| || || ||||| || || || |||||||||||||||||
Sbjct: 863  cgacttctccacgctctacgcgccgctcatccgcgacggccgcatggagaagttctactg 922

                                                                        
Query: 397  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 456
            ||| |||||||| || ||||| ||||| ||||||||||| |||||||  ||||||   ||
Sbjct: 923  ggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatcttccgcaccgacggcgt 982

                                                                        
Query: 457  cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgacttttt 516
            |   || |||   |||||| || | |||||||||||||| || || ||||| || || ||
Sbjct: 983  cgacgaggagcacgtcgtccagctggtcgacaccttccctggccagtccatcgatttctt 1042

                                                
Query: 517  cggtgctctgcgtgctcgggtgtacgacgatgaggt 552
            ||| || |||||||| ||||| |||||||| |||||
Sbjct: 1043 cggcgcgctgcgtgcccgggtctacgacgacgaggt 1078



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 78/88 (88%)
 Strand = Plus / Plus

                                                                       
Query: 14  ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 73
           |||||| ||||||||||||||||||| || || |||||||| ||||| || ||||| || 
Sbjct: 483 ctcatcctgggtatctggggaggcaaaggccagggaaaatcgttccaatgcgagctggtc 542

                                       
Query: 74  ttcgccaagatgggcatcaaccccatca 101
           ||||||||||||||||||| ||||||||
Sbjct: 543 ttcgccaagatgggcatcacccccatca 570

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  331 bits (167), Expect = 2e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                        
Query: 108  ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
            ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 800  ggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacg 859

                                                                        
Query: 168  atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
            |||||||||||||||||||| | ||||| || || || |||||||| |||||||||||||
Sbjct: 860  atcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccaga 919

                                                                        
Query: 228  tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
            |||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| || |
Sbjct: 920  tggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaa 979

                                                                        
Query: 288  tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
            ||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||||| |
Sbjct: 980  tgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttctcca 1039

                                                                        
Query: 348  cgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccaccc 407
            | || ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 1040 ccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccgaccc 1099

                                               
Query: 408  gtgacgaccgtatcggtgtctgcaagggtatcttc 442
            |||| ||||||||||||||||||||||||||||||
Sbjct: 1100 gtgaagaccgtatcggtgtctgcaagggtatcttc 1134



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 646 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 705

                                          
Query: 71  gtgttcgccaagatgggcatcaaccccatca 101
           ||  | ||||||||||| |||||||| ||||
Sbjct: 706 gtcatggccaagatgggtatcaacccaatca 736

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  331 bits (167), Expect = 2e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                        
Query: 108  ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
            ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 800  ggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacg 859

                                                                        
Query: 168  atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
            |||||||||||||||||||| | ||||| || || || |||||||| |||||||||||||
Sbjct: 860  atcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccaga 919

                                                                        
Query: 228  tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
            |||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| || |
Sbjct: 920  tggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaa 979

                                                                        
Query: 288  tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
            ||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||||| |
Sbjct: 980  tgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttctcca 1039

                                                                        
Query: 348  cgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccaccc 407
            | || ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 1040 ccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccgaccc 1099

                                               
Query: 408  gtgacgaccgtatcggtgtctgcaagggtatcttc 442
            |||| ||||||||||||||||||||||||||||||
Sbjct: 1100 gtgaagaccgtatcggtgtctgcaagggtatcttc 1134



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 646 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 705

                                          
Query: 71  gtgttcgccaagatgggcatcaaccccatca 101
           ||  | ||||||||||| |||||||| ||||
Sbjct: 706 gtcatggccaagatgggtatcaacccaatca 736

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  331 bits (167), Expect = 2e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                        
Query: 108  ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
            ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 829  ggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacg 888

                                                                        
Query: 168  atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
            |||||||||||||||||||| | ||||| || || || |||||||| |||||||||||||
Sbjct: 889  atcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccaga 948

                                                                        
Query: 228  tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
            |||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| || |
Sbjct: 949  tggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaa 1008

                                                                        
Query: 288  tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
            ||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||||| |
Sbjct: 1009 tgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttctcca 1068

                                                                        
Query: 348  cgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccaccc 407
            | || ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 1069 ccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccgaccc 1128

                                               
Query: 408  gtgacgaccgtatcggtgtctgcaagggtatcttc 442
            |||| ||||||||||||||||||||||||||||||
Sbjct: 1129 gtgaagaccgtatcggtgtctgcaagggtatcttc 1163



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 675 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 734

                                          
Query: 71  gtgttcgccaagatgggcatcaaccccatca 101
           ||  | ||||||||||| |||||||| ||||
Sbjct: 735 gtcatggccaagatgggtatcaacccaatca 765

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  331 bits (167), Expect = 2e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                        
Query: 108  ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
            ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 711  ggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacg 770

                                                                        
Query: 168  atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
            |||||||||||||||||||| | ||||| || || || |||||||| |||||||||||||
Sbjct: 771  atcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccaga 830

                                                                        
Query: 228  tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
            |||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| || |
Sbjct: 831  tggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaa 890

                                                                        
Query: 288  tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
            ||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||||| |
Sbjct: 891  tgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttctcca 950

                                                                        
Query: 348  cgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccaccc 407
            | || ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 951  ccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccgaccc 1010

                                               
Query: 408  gtgacgaccgtatcggtgtctgcaagggtatcttc 442
            |||| ||||||||||||||||||||||||||||||
Sbjct: 1011 gtgaagaccgtatcggtgtctgcaagggtatcttc 1045



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 557 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 616

                                          
Query: 71  gtgttcgccaagatgggcatcaaccccatca 101
           ||  | ||||||||||| |||||||| ||||
Sbjct: 617 gtcatggccaagatgggtatcaacccaatca 647

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  331 bits (167), Expect = 2e-87
 Identities = 293/335 (87%)
 Strand = Plus / Minus

                                                                         
Query: 108   ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
             ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 14488 ggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacg 14429

                                                                         
Query: 168   atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
             |||||||||||||||||||| | ||||| || || || |||||||| |||||||||||||
Sbjct: 14428 atcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccaga 14369

                                                                         
Query: 228   tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
             |||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| || |
Sbjct: 14368 tggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaa 14309

                                                                         
Query: 288   tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
             ||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||||| |
Sbjct: 14308 tgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttctcca 14249

                                                                         
Query: 348   cgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccaccc 407
             | || ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 14248 ccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccgaccc 14189

                                                
Query: 408   gtgacgaccgtatcggtgtctgcaagggtatcttc 442
             |||| ||||||||||||||||||||||||||||||
Sbjct: 14188 gtgaagaccgtatcggtgtctgcaagggtatcttc 14154



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 11    ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
             ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 14733 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 14674

                                    
Query: 71    gtgttcgccaagatgggcatcaa 93
             ||  | ||||||||||| |||||
Sbjct: 14673 gtcatggccaagatgggtatcaa 14651

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  331 bits (167), Expect = 2e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                        
Query: 108  ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
            ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 714  ggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacg 773

                                                                        
Query: 168  atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
            |||||||||||||||||||| | ||||| || || || |||||||| |||||||||||||
Sbjct: 774  atcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccaga 833

                                                                        
Query: 228  tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
            |||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| || |
Sbjct: 834  tggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaa 893

                                                                        
Query: 288  tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
            ||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||||| |
Sbjct: 894  tgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttctcca 953

                                                                        
Query: 348  cgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccaccc 407
            | || ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 954  ccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccgaccc 1013

                                               
Query: 408  gtgacgaccgtatcggtgtctgcaagggtatcttc 442
            |||| ||||||||||||||||||||||||||||||
Sbjct: 1014 gtgaagaccgtatcggtgtctgcaagggtatcttc 1048



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 560 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 619

                                          
Query: 71  gtgttcgccaagatgggcatcaaccccatca 101
           ||  | ||||||||||| |||||||| ||||
Sbjct: 620 gtcatggccaagatgggtatcaacccaatca 650

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  331 bits (167), Expect = 2e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                        
Query: 108  ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
            ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 711  ggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacg 770

                                                                        
Query: 168  atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
            |||||||||||||||||||| | ||||| || || || |||||||| |||||||||||||
Sbjct: 771  atcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccaga 830

                                                                        
Query: 228  tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
            |||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| || |
Sbjct: 831  tggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaa 890

                                                                        
Query: 288  tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
            ||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||||| |
Sbjct: 891  tgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttctcca 950

                                                                        
Query: 348  cgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccaccc 407
            | || ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 951  ccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccgaccc 1010

                                               
Query: 408  gtgacgaccgtatcggtgtctgcaagggtatcttc 442
            |||| ||||||||||||||||||||||||||||||
Sbjct: 1011 gtgaagaccgtatcggtgtctgcaagggtatcttc 1045



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 557 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 616

                                          
Query: 71  gtgttcgccaagatgggcatcaaccccatca 101
           ||  | ||||||||||| |||||||| ||||
Sbjct: 617 gtcatggccaagatgggtatcaacccaatca 647

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score =  331 bits (167), Expect = 2e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                        
Query: 108  ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
            ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 714  ggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacg 773

                                                                        
Query: 168  atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
            |||||||||||||||||||| | ||||| || || || |||||||| |||||||||||||
Sbjct: 774  atcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccaga 833

                                                                        
Query: 228  tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
            |||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| || |
Sbjct: 834  tggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaa 893

                                                                        
Query: 288  tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
            ||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||||| |
Sbjct: 894  tgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttctcca 953

                                                                        
Query: 348  cgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccaccc 407
            | || ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 954  ccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccgaccc 1013

                                               
Query: 408  gtgacgaccgtatcggtgtctgcaagggtatcttc 442
            |||| ||||||||||||||||||||||||||||||
Sbjct: 1014 gtgaagaccgtatcggtgtctgcaagggtatcttc 1048



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 560 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 619

                                          
Query: 71  gtgttcgccaagatgggcatcaaccccatca 101
           ||  | ||||||||||| |||||||| ||||
Sbjct: 620 gtcatggccaagatgggtatcaacccaatca 650

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  331 bits (167), Expect = 2e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                       
Query: 230 gtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatg 289
           |||||||||||||||||||||||||||||   ||| ||||||||||||||||| || |||
Sbjct: 1   gtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatg 60

                                                                       
Query: 290 tacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacg 349
           |||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| |||
Sbjct: 61  tacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacg 120

                                                                       
Query: 350 ctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgt 409
           || ||||| || || |||||||| || |||||||||||||||||||||||||||||||| 
Sbjct: 121 ctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgc 180

                                                                       
Query: 410 gacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtct 469
           ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||   
Sbjct: 181 gacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggac 240

                                                                       
Query: 470 gtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgt 529
            |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| |||
Sbjct: 241 atcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgt 300

                                              
Query: 530 gctcgggtgtacgacgatgaggtgcgcaagtgggt 564
           || || || |||||||| |||||||||||||||||
Sbjct: 301 gcccgtgtttacgacgacgaggtgcgcaagtgggt 335



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Plus

                                              
Query: 581 gagaacattggcaagaggctggtgaactcgcggga 615
           |||||||||||||||||||||||||||||| ||||
Sbjct: 352 gagaacattggcaagaggctggtgaactcgaggga 386

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  331 bits (167), Expect = 2e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                        
Query: 108  ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
            ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 2795 ggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacg 2854

                                                                        
Query: 168  atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
            |||||||||||||||||||| | ||||| || || || |||||||| |||||||||||||
Sbjct: 2855 atcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccaga 2914

                                                                        
Query: 228  tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
            |||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| || |
Sbjct: 2915 tggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaa 2974

                                                                        
Query: 288  tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
            ||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||||| |
Sbjct: 2975 tgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttctcca 3034

                                                                        
Query: 348  cgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccaccc 407
            | || ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 3035 ccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccgaccc 3094

                                               
Query: 408  gtgacgaccgtatcggtgtctgcaagggtatcttc 442
            |||| ||||||||||||||||||||||||||||||
Sbjct: 3095 gtgaagaccgtatcggtgtctgcaagggtatcttc 3129



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                        
Query: 11   ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
            ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 2550 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 2609

                                   
Query: 71   gtgttcgccaagatgggcatcaa 93
            ||  | ||||||||||| |||||
Sbjct: 2610 gtcatggccaagatgggtatcaa 2632

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  323 bits (163), Expect = 4e-85
 Identities = 292/335 (87%)
 Strand = Plus / Plus

                                                                       
Query: 108 ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
           ||||||||||||| || ||| ||||||||||||| |||||||| || ||| |||||||||
Sbjct: 626 ggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcctcatcaacg 685

                                                                       
Query: 168 atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
           |||||||||||||||||||| | ||||| || || || |||||||| |||||||||||||
Sbjct: 686 atcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccaga 745

                                                                       
Query: 228 tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
           |||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| || |
Sbjct: 746 tggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaa 805

                                                                       
Query: 288 tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
           ||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||||| |
Sbjct: 806 tgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttctcca 865

                                                                       
Query: 348 cgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccaccc 407
           | || ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 866 ccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccgaccc 925

                                              
Query: 408 gtgacgaccgtatcggtgtctgcaagggtatcttc 442
           |||| ||||||||||||||||||||||||||||||
Sbjct: 926 gtgaagaccgtatcggtgtctgcaagggtatcttc 960



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 472 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 531

                                          
Query: 71  gtgttcgccaagatgggcatcaaccccatca 101
           ||  | ||||||||||| |||||||| ||||
Sbjct: 532 gtcatggccaagatgggtatcaacccaatca 562

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  323 bits (163), Expect = 4e-85
 Identities = 292/335 (87%)
 Strand = Plus / Plus

                                                                        
Query: 108  ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
            ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 703  ggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacg 762

                                                                        
Query: 168  atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
            |||||||||||||||||||| | ||||| || || || |||||||| |||||||||||||
Sbjct: 763  atcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccaga 822

                                                                        
Query: 228  tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
            |||| ||||| || || |||||||| || |||  ||| |||||||| ||||| || || |
Sbjct: 823  tggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagcttccaggaa 882

                                                                        
Query: 288  tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
            ||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||||| |
Sbjct: 883  tgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttctcca 942

                                                                        
Query: 348  cgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccaccc 407
            | || ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 943  ccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccgaccc 1002

                                               
Query: 408  gtgacgaccgtatcggtgtctgcaagggtatcttc 442
            |||| ||||||||||||||||||||||||||||||
Sbjct: 1003 gtgaagaccgtatcggtgtctgcaagggtatcttc 1037



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 549 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 608

                                          
Query: 71  gtgttcgccaagatgggcatcaaccccatca 101
           ||  | ||||||||||| |||||||| ||||
Sbjct: 609 gtcatggccaagatgggtatcaacccaatca 639

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  323 bits (163), Expect = 4e-85
 Identities = 292/335 (87%)
 Strand = Plus / Plus

                                                                        
Query: 108  ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
            ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 829  ggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacg 888

                                                                        
Query: 168  atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
            |||||||||||||||||||| | ||||| || || || |||||||| |||||||| ||||
Sbjct: 889  atcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaatcaga 948

                                                                        
Query: 228  tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
            |||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| || |
Sbjct: 949  tggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaa 1008

                                                                        
Query: 288  tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
            ||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||||| |
Sbjct: 1009 tgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttctcca 1068

                                                                        
Query: 348  cgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccaccc 407
            | || ||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||
Sbjct: 1069 ccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggccccgaccc 1128

                                               
Query: 408  gtgacgaccgtatcggtgtctgcaagggtatcttc 442
            |||| ||||||||||||||||||||||||||||||
Sbjct: 1129 gtgaagaccgtatcggtgtctgcaagggtatcttc 1163



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 80/91 (87%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 675 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 734

                                          
Query: 71  gtgttcgccaagatgggcatcaaccccatca 101
           ||  | ||||||||||| |||||||| ||||
Sbjct: 735 gtcatggccaagatgggtatcaacccaatca 765

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  317 bits (160), Expect = 2e-83
 Identities = 299/347 (86%)
 Strand = Plus / Plus

                                                                       
Query: 97  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 156
           |||||||||||| |||||||||||  | ||| | ||||||||||| ||||||||||||||
Sbjct: 623 catcaggcagcgctaccgtgaggcctccgacctcatcaagaagggcaagatgtgctgcct 682

                                                                       
Query: 157 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
           ||||||||||||  | ||||| || |||||| | |||||||| ||||| |||||||| ||
Sbjct: 683 cttcatcaacgacttggacgccggcgcgggtcgcatgggcggcaccacccagtacacggt 742

                                                                       
Query: 217 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
            |||||||||||||| ||||||||||||||||||||||||||   |||||||||||||||
Sbjct: 743 gaacaaccagatggtcaacgccaccctgatgaacatcgccgacaaccccaccaacgtgca 802

                                                                       
Query: 277 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
           |||||| || ||||||||||||||||| ||     | ||||||||| |||||||||| ||
Sbjct: 803 gctcccggggatgtacaacaaggaggacaannnnngcgtgcccatcatcgtcaccggcaa 862

                                                                       
Query: 337 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
           ||| ||||| ||||||||||| || || ||||| || || || |||||||||||||||||
Sbjct: 863 cgacttctccacgctctacgcgccgctcatccgcgacggccgcatggagaagttctactg 922

                                                          
Query: 397 ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||| |||||||| || ||||| ||||| ||||||||||| |||||||
Sbjct: 923 ggcgcccacccgcgaggaccgcatcggcgtctgcaagggcatcttcc 969



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                       
Query: 14  ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 73
           |||||| ||||||||  ||||||||| || || |||||||| ||||| || ||||| || 
Sbjct: 483 ctcatcctgggtatcgtgggaggcaaaggccagggaaaatcgttccaatgcgagctggtc 542

                              
Query: 74  ttcgccaagatgggcatca 92
           |||||||||||||||||||
Sbjct: 543 ttcgccaagatgggcatca 561

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score =  307 bits (155), Expect = 2e-80
 Identities = 371/443 (83%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||  |||||| ||||||| |||||| ||||||
Sbjct: 176 cagcgctaccgtgaggccgcggacctgatctcgaagggcaagatgtcctgcctgttcatc 235

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 236 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 295

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 296 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 355

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 356 gggatgtacagcaaggtggacaacccgcgtgtgcccatcgtcgtcaccggcaacgacttc 415

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || || || || || || ||||| |||||||||||||| |||
Sbjct: 416 tccacgctgtacgcgccgctcattcgcgacgggcgcatggacaagttctactgggcgccc 475

                                                                       
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgac 463
           ||||| |||||||| ||||| || |||||||| |||||||  ||||||   |||   |||
Sbjct: 476 acccgcgacgaccgcatcggcgtgtgcaagggcatcttccgcaccgacggcgtccccgac 535

                                                                       
Query: 464 gagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgct 523
           |||   |||||| || |||||||| ||||||| || || ||||| ||||| ||||| || 
Sbjct: 536 gagcacgtcgtccagctcgtcgacgccttcccgggccagtccatcgacttcttcggcgcc 595

                                  
Query: 524 ctgcgtgctcgggtgtacgacga 546
           || || || ||||||||||||||
Sbjct: 596 ctccgcgcccgggtgtacgacga 618

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score =  307 bits (155), Expect = 2e-80
 Identities = 371/443 (83%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||  |||||| ||||||| |||||| ||||||
Sbjct: 184 cagcgctaccgtgaggcggcggacctgatctcgaagggcaagatgtcctgcctgttcatc 243

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 244 aacgatctggacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 303

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 304 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 363

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| ||||||||||||||||||||||| ||||| |||
Sbjct: 364 gggatgtacagcaaggtggacaacccgcgtgtgcccatcgtcgtcaccggcaacgacttc 423

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || ||||| || || || ||||| |||||||||||||| |||
Sbjct: 424 tccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactgggcgccc 483

                                                                       
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgac 463
           ||||| || ||||| ||||| || |||||||| |||||||  ||||||   |||   |||
Sbjct: 484 acccgggaggaccgcatcggcgtgtgcaagggcatcttccgcaccgacggcgtccccgac 543

                                                                       
Query: 464 gagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgct 523
           |||   |||||| || |||||||| ||||||| || || ||||| ||||| ||||| || 
Sbjct: 544 gagcacgtcgtccagctcgtcgacgccttcccgggccagtccatcgacttcttcggcgcc 603

                                  
Query: 524 ctgcgtgctcgggtgtacgacga 546
           || || || ||||||||||||||
Sbjct: 604 ctccgcgcccgggtgtacgacga 626

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  299 bits (151), Expect = 6e-78
 Identities = 307/359 (85%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
            ||||||||  |||||||||| ||||| ||||| |||||||||||||| ||||||||||| 
Sbjct: 685  atcaggcaaaggtaccgtgaagctgctgacattatcaagaagggtaaaatgtgctgcctg 744

                                                                        
Query: 158  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
            |||||||||||||| |||||||| || ||| | ||||| ||||| || || ||||| || 
Sbjct: 745  ttcatcaacgatctcgacgctggagctggtcgtatgggtggaacaactcaatacactgtt 804

                                                                        
Query: 218  aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
            ||||||||||||||||| |||||||| |||||||| || ||   ||| || || || |||
Sbjct: 805  aacaaccagatggtgaatgccaccctcatgaacattgctgacaacccaacaaatgtccag 864

                                                                        
Query: 278  ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
            |||||||| |||||||||||||| |||||||| |||||||| ||| | ||||| ||||||
Sbjct: 865  ctccctggtatgtacaacaaggaagagaaccctcgtgtgcctatcattgtcactggtaac 924

                                                                        
Query: 338  gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
            || ||||||||  | ||||||||||| |||||||||||||||||||| || |||||||||
Sbjct: 925  gacttctcgacattgtacgctcctcttatccgtgatggtcgtatggaaaaattctactgg 984

                                                                       
Query: 398  gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 456
            ||||| ||| | || |||||||| ||||||||||||||||| |||  ||| ||||||||
Sbjct: 985  gctcctaccagggaagaccgtattggtgtctgcaagggtattttcaggactgacaatgt 1043



 Score =  113 bits (57), Expect = 7e-22
 Identities = 78/85 (91%)
 Strand = Plus / Plus

                                                                       
Query: 17  atcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttc 76
           ||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || 
Sbjct: 547 atcttgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgttttt 606

                                    
Query: 77  gccaagatgggcatcaaccccatca 101
           ||||||||||| |||||||||||||
Sbjct: 607 gccaagatgggaatcaaccccatca 631

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score =  293 bits (148), Expect = 3e-76
 Identities = 292/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 190 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 249

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 250 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 309

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 310 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 369

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 370 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 429

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || |||||||| || || ||||| |||||||||||||| |||
Sbjct: 430 tccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactgggcgccc 489

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 490 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score =  293 bits (148), Expect = 3e-76
 Identities = 292/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 192 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 251

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 252 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 311

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 312 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 371

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 372 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 431

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || |||||||| || || ||||| |||||||||||||| |||
Sbjct: 432 tccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactgggcgccc 491

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 492 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score =  293 bits (148), Expect = 3e-76
 Identities = 292/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 196 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 255

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 256 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 315

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 316 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 375

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 376 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 435

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || |||||||| || || ||||| |||||||||||||| |||
Sbjct: 436 tccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactgggcgccc 495

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 496 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 535

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score =  293 bits (148), Expect = 3e-76
 Identities = 292/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 192 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 251

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 252 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 311

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 312 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 371

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 372 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 431

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || |||||||| || || ||||| |||||||||||||| |||
Sbjct: 432 tccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactgggcgccc 491

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 492 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score =  293 bits (148), Expect = 3e-76
 Identities = 292/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 192 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 251

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 252 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 311

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 312 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 371

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 372 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 431

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || |||||||| || || ||||| |||||||||||||| |||
Sbjct: 432 tccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactgggcgccc 491

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 492 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score =  293 bits (148), Expect = 3e-76
 Identities = 292/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 192 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 251

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 252 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 311

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 312 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 371

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 372 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 431

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || |||||||| || || ||||| |||||||||||||| |||
Sbjct: 432 tccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactgggcgccc 491

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 492 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score =  293 bits (148), Expect = 3e-76
 Identities = 292/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 192 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 251

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 252 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 311

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 312 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 371

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 372 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 431

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || |||||||| || || ||||| |||||||||||||| |||
Sbjct: 432 tccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactgggcgccc 491

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 492 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score =  293 bits (148), Expect = 3e-76
 Identities = 292/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 194 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 253

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 254 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 313

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 314 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 373

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 374 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 433

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || |||||||| || || ||||| |||||||||||||| |||
Sbjct: 434 tccacgctgtacgcgccgctcatccgtgacgggcgcatggacaagttctactgggcgccc 493

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 494 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 533

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  289 bits (146), Expect = 5e-75
 Identities = 302/354 (85%)
 Strand = Plus / Plus

                                                                       
Query: 98  atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
           ||||||||  |||||||||| ||||| ||||| ||||| ||||| || ||||||  ||||
Sbjct: 499 atcaggcaaaggtaccgtgaagctgccgacataatcaaaaagggcaaaatgtgcgccctc 558

                                                                       
Query: 158 ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
           ||||| |||||||| || |||||||| ||| | ||||| |||||||| || |||||||||
Sbjct: 559 ttcattaacgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacaccgtc 618

                                                                       
Query: 218 aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
           |||||||||||||| || || ||||| |||||||||||||||  |||||||||||| |||
Sbjct: 619 aacaaccagatggttaatgctaccctcatgaacatcgccgataaccccaccaacgtccag 678

                                                                       
Query: 278 ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
           ||||| || |||||||||||||| |||||||||||||| |||||  ||||||| ||||||
Sbjct: 679 ctccccggtatgtacaacaaggaagagaacccccgtgtccccattatcgtcactggtaac 738

                                                                       
Query: 338 gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
           |||||||| || || || |||||||| |||||||| |||||||||||||| || ||||||
Sbjct: 739 gatttctccacactgtatgctcctctcatccgtgacggtcgtatggagaaattttactgg 798

                                                                 
Query: 398 gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgac 451
           || || ||  | ||||||||| ||||||| ||||| ||||| |||  |||||||
Sbjct: 799 gcaccaactagggacgaccgtgtcggtgtttgcaaaggtattttcaggaccgac 852



 Score =  121 bits (61), Expect = 3e-24
 Identities = 79/85 (92%)
 Strand = Plus / Plus

                                                                       
Query: 17  atcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttc 76
           ||||||||||| ||||||||||| |||||||||||||| ||||| |||||||||||||| 
Sbjct: 361 atcttgggtatttggggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgttt 420

                                    
Query: 77  gccaagatgggcatcaaccccatca 101
           ||||||||||| |||||||||||||
Sbjct: 421 gccaagatgggtatcaaccccatca 445



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 480 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 539
           |||||||||||||||| || |||||||| || || ||||||||  || | |||||||| |
Sbjct: 881 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 940

               
Query: 540 acga 543
           ||||
Sbjct: 941 acga 944

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score =  285 bits (144), Expect = 8e-74
 Identities = 291/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 194 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 253

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 254 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 313

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 314 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 373

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 374 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 433

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || ||||| || || || ||||| |||||||||||||| |||
Sbjct: 434 tccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactgggcgccc 493

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 494 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 533

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score =  285 bits (144), Expect = 8e-74
 Identities = 291/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 192 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 251

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 252 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 311

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 312 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 371

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 372 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 431

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || ||||| || || || ||||| |||||||||||||| |||
Sbjct: 432 tccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactgggcgccc 491

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 492 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score =  285 bits (144), Expect = 8e-74
 Identities = 291/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 190 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 249

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 250 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 309

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 310 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 369

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 370 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 429

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || ||||| || || || ||||| |||||||||||||| |||
Sbjct: 430 tccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactgggcgccc 489

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 490 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score =  285 bits (144), Expect = 8e-74
 Identities = 291/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 190 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 249

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 250 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 309

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 310 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 369

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 370 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 429

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || ||||| || || || ||||| |||||||||||||| |||
Sbjct: 430 tccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactgggcgccc 489

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 490 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 529

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score =  285 bits (144), Expect = 8e-74
 Identities = 291/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 192 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 251

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 252 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 311

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 312 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 371

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 372 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 431

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || ||||| || || || ||||| |||||||||||||| |||
Sbjct: 432 tccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactgggcgccc 491

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 492 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 531

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score =  285 bits (144), Expect = 8e-74
 Identities = 291/340 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 163
           ||||| ||||||||||| || ||| |||||   ||||| ||||||| |||||| ||||||
Sbjct: 196 cagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcctgttcatc 255

                                                                       
Query: 164 aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 223
           |||||||| ||||| || || ||  | |||||||| ||||| |||||||| || ||||||
Sbjct: 256 aacgatctcgacgccggcgcaggccgcatgggcggcaccacccagtacacggtgaacaac 315

                                                                       
Query: 224 cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 283
           |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||| 
Sbjct: 316 cagatggtgaacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccg 375

                                                                       
Query: 284 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 343
           || ||||||| ||||| ||| ||||| |||||||||||| |||||||||| ||||| |||
Sbjct: 376 gggatgtacagcaaggtggacaacccgcgtgtgcccatcatcgtcaccggcaacgacttc 435

                                                                       
Query: 344 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 403
           || ||||| ||||| || || ||||| || || || ||||| |||||||||||||| |||
Sbjct: 436 tccacgctgtacgcgccgctcatccgcgacgggcgcatggacaagttctactgggcgccc 495

                                                   
Query: 404 acccgtgacgaccgtatcggtgtctgcaagggtatcttcc 443
           ||||| |||||||| ||||| || |||||||| |||||||
Sbjct: 496 acccgcgacgaccgcatcggcgtgtgcaagggcatcttcc 535

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase 1 mRNA, complete cds
          Length = 1559

 Score =  283 bits (143), Expect = 3e-73
 Identities = 305/359 (84%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
            ||||||||  ||||||||||||| || ||||| |||||||| || || ||||| ||||||
Sbjct: 685  atcaggcaaaggtaccgtgaggccgccgacattatcaagaaagggaaaatgtgttgcctc 744

                                                                        
Query: 158  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
            || ||||||||||| |||||||| || ||| | ||||| |||||||| || ||||| || 
Sbjct: 745  tttatcaacgatctcgacgctggagccggtcgtatgggaggaaccacacaatacacagtg 804

                                                                        
Query: 218  aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
            |||||||| |||||||||||||| || ||||||||||| |||  |||||||||||| |||
Sbjct: 805  aacaaccaaatggtgaacgccacactcatgaacatcgctgataaccccaccaacgttcag 864

                                                                        
Query: 278  ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
            ||||| || |||||||||||||| |||||||| ||||| || ||| | ||||||||||||
Sbjct: 865  ctccccggtatgtacaacaaggaagagaaccctcgtgttccgatcattgtcaccggtaac 924

                                                                        
Query: 338  gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
            |||||||||||||| ||||| || || |||||||| ||||||||||||||||| ||||||
Sbjct: 925  gatttctcgacgctgtacgcgccgctcatccgtgacggtcgtatggagaagttttactgg 984

                                                                       
Query: 398  gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 456
            || |||||| | || ||  | |||||||| ||||  ||||| |||  ||||||||||||
Sbjct: 985  gcacccaccagggaagataggatcggtgtttgcacaggtattttcaggaccgacaatgt 1043



 Score =  109 bits (55), Expect = 1e-20
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                       
Query: 17  atcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttc 76
           ||||||||||| ||||||||||| |||||||||||||| ||||| ||||||||||| || 
Sbjct: 547 atcttgggtatttggggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtcttt 606

                                  
Query: 77  gccaagatgggcatcaaccccat 99
           ||||||||||| |||||||||||
Sbjct: 607 gccaagatgggaatcaaccccat 629



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                      
Query: 485  gacaccttcccaggacaatccattgactttttcggtgctctg 526
            ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1072 gacaccttcccgggccaatccattgactttttcggtgctctg 1113

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score =  281 bits (142), Expect = 1e-72
 Identities = 301/354 (85%)
 Strand = Plus / Plus

                                                                       
Query: 98  atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
           ||||||||  |||||||||| || || ||||| ||||| ||||| || ||||||  | | 
Sbjct: 500 atcaggcaaaggtaccgtgaagccgccgacataatcaaaaagggcaaaatgtgcgccttg 559

                                                                       
Query: 158 ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
           ||||| || ||||| || |||||||| ||| | ||||| |||||||| || |||||||||
Sbjct: 560 ttcattaatgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacaccgtc 619

                                                                       
Query: 218 aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
           |||||||||||||| ||||| ||||| |||||||||||||||  |||||||||||| |||
Sbjct: 620 aacaaccagatggttaacgctaccctcatgaacatcgccgataaccccaccaacgtccag 679

                                                                       
Query: 278 ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
           ||||| || |||||||||||||| |||||||||||||| |||||| ||||||| ||||||
Sbjct: 680 ctccccggtatgtacaacaaggaagagaacccccgtgtccccatcatcgtcactggtaac 739

                                                                       
Query: 338 gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
           |||||||| || || || |||||||| |||||||| |||||||||||||| || ||||||
Sbjct: 740 gatttctccacactgtatgctcctctcatccgtgacggtcgtatggagaaattttactgg 799

                                                                 
Query: 398 gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgac 451
           || || ||  | ||||||||||||||||| ||||| ||||| |||  |||||||
Sbjct: 800 gcaccaactagggacgaccgtatcggtgtttgcaaaggtattttcaggaccgac 853



 Score =  113 bits (57), Expect = 7e-22
 Identities = 75/81 (92%)
 Strand = Plus / Plus

                                                                       
Query: 21  tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 80
           ||||||| ||||||||||| |||||||||||||| ||||| |||||||||||||| ||||
Sbjct: 366 tgggtatttggggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgcca 425

                                
Query: 81  agatgggcatcaaccccatca 101
           ||||||| |||||||||||||
Sbjct: 426 agatgggtatcaaccccatca 446



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 480 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 539
           |||||||||||||||| || |||||||| || || ||||||||  || | |||||||| |
Sbjct: 882 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 941

               
Query: 540 acga 543
           ||||
Sbjct: 942 acga 945

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  266 bits (134), Expect = 8e-68
 Identities = 355/426 (83%), Gaps = 2/426 (0%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ct 156
            ||||||||  ||||||||||||| |||||||| ||    ||||| |||||||| ||| ||
Sbjct: 740  atcaggcaaaggtaccgtgaggcagcagacataattgccaagggaaagatgtg-tgctct 798

                                                                        
Query: 157  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
             |||||||||||||| ||||| ||||| ||  | ||||| || ||||| || ||||||||
Sbjct: 799  gttcatcaacgatctcgacgcgggtgctggacgtatgggaggcaccacacaatacaccgt 858

                                                                        
Query: 217  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
             |||||||||||||| ||||||||||| |||||||| || ||   ||||||||| || ||
Sbjct: 859  gaacaaccagatggttaacgccaccctcatgaacattgctgacaaccccaccaatgtcca 918

                                                                        
Query: 277  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
             |||||||| |||||||||||| | |||||| ||||||| |||||  ||||||| |||||
Sbjct: 919  actccctggtatgtacaacaagcaagagaacgcccgtgttcccattatcgtcactggtaa 978

                                                                        
Query: 337  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
            ||| ||||| ||  | |||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 979  cgacttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttctactg 1038

                                                                        
Query: 397  ggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 456
            ||||||||||||||| ||||||||||||||   ||  |||||||||  ||||||||||||
Sbjct: 1039 ggctcccacccgtgaggaccgtatcggtgttgccaccggtatcttcaggaccgacaatgt 1098

                                                                        
Query: 457  cagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgacttttt 516
               ||| ||    || |||||| |||||||||||||||| || ||||| ||||| || ||
Sbjct: 1099 tcctgaggaccacgttgtcaagctcgtcgacaccttccctggccaatctattgatttctt 1158

                  
Query: 517  cggtgc 522
            ||||||
Sbjct: 1159 cggtgc 1164



 Score =  121 bits (61), Expect = 3e-24
 Identities = 79/85 (92%)
 Strand = Plus / Plus

                                                                       
Query: 17  atcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttc 76
           ||||||||||| ||||||||||| |||||||| ||||| ||||| |||||||||||||||
Sbjct: 602 atcttgggtatttggggaggcaaaggtcaaggtaaatccttccaatgtgagcttgtgttc 661

                                    
Query: 77  gccaagatgggcatcaaccccatca 101
           ||||||||||| |||||||||||||
Sbjct: 662 gccaagatgggaatcaaccccatca 686

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score =  260 bits (131), Expect = 5e-66
 Identities = 286/335 (85%), Gaps = 2/335 (0%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ct 156
            ||||||||  |||||||||| || || ||||| |||| ||||||||| ||||| ||| ||
Sbjct: 701  atcaggcaaaggtaccgtgaagcagccgacattatcaggaagggtaaaatgtg-tgcact 759

                                                                        
Query: 157  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
            |||||||||||||||||| || || || ||| || | || |||||||| || ||||| ||
Sbjct: 760  cttcatcaacgatcttgatgcaggagctggtcggcttggtggaaccacccaatacactgt 819

                                                                        
Query: 217  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
            ||||||||| |||||||| |||||||| |||||||| || |||  ||| || ||||| ||
Sbjct: 820  caacaaccaaatggtgaatgccaccctcatgaacattgctgataacccgacaaacgtcca 879

                                                                        
Query: 277  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
            ||| || || ||||||||||||||||||||||||||||| || ||| | |||||||||||
Sbjct: 880  gcttccaggtatgtacaacaaggaggagaacccccgtgtcccaatcattgtcaccggtaa 939

                                                                        
Query: 337  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
            ||||||||| ||  | ||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 940  cgatttctcaacattgtacgctcctctcatccgtgacggtcgtatggagaagttctactg 999

                                               
Query: 397  ggctcccacccgtgacgaccgtatcggtgtctgca 431
            |||||||||||| || || ||||| || |||||||
Sbjct: 1000 ggctcccacccgcgaagatcgtattggagtctgca 1034



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                       
Query: 14  ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 73
           |||||||||||||| ||||||||||| ||||| || || || |||||||| |||||||| 
Sbjct: 560 ctcatcttgggtatttggggaggcaaaggtcagggcaagtctttccagtgcgagcttgtc 619

                       
Query: 74  ttcgccaagatg 85
           || |||||||||
Sbjct: 620 tttgccaagatg 631



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                        
Query: 485  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 544
            |||||||||||||| ||||| ||||| || || |||||  || | ||| |||| ||||||
Sbjct: 1088 gacaccttcccaggccaatctattgatttctttggtgccttgagggctagggtttacgac 1147

                              
Query: 545  gatgaggtgcgcaagtgg 562
            ||||| ||| | ||||||
Sbjct: 1148 gatgaagtgaggaagtgg 1165

---

>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score =  242 bits (122), Expect = 1e-60
 Identities = 275/324 (84%), Gaps = 4/324 (1%)
 Strand = Plus / Plus

                                                                        
Query: 108  ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
            ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||||||
Sbjct: 695  ggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatcaacg 754

                                                                        
Query: 168  atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
            |||||||||||||||||||| | ||||| || || || |||||||| |||||||||||||
Sbjct: 755  atcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaaccaga 814

                                                                        
Query: 228  tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
            |||| ||||| || || |||||||| || |||  ||| |||||||| |||||||| || |
Sbjct: 815  tggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctcccaggaa 874

                                                                        
Query: 288  tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
            ||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||||| |
Sbjct: 875  tgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgatttctcca 934

                                                                        
Query: 348  cgctctacgctcctctgatccgtgatggtcgtatggagaagttct--actgggctcccac 405
            |  | |||| |||||| |||| |||||| ||||||||||||||||  |||||   || ||
Sbjct: 935  ccttatacggtcctctcatccttgatggacgtatggagaagttcttgactgg--cccgac 992

                                    
Query: 406  ccgtgacgaccgtatcggtgtctg 429
            |||||| |||||||||||||||||
Sbjct: 993  ccgtgaagaccgtatcggtgtctg 1016



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 64/72 (88%)
 Strand = Plus / Plus

                                                                       
Query: 30  ggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggca 89
           |||||||||| |||||||| ||||| |||||||||||||||||  | ||||||||||| |
Sbjct: 560 ggggaggcaaaggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggta 619

                       
Query: 90  tcaaccccatca 101
           ||||||| ||||
Sbjct: 620 tcaacccaatca 631

---

>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score =  242 bits (122), Expect = 1e-60
 Identities = 251/294 (85%)
 Strand = Plus / Plus

                                                                       
Query: 109 gtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacga 168
           |||||||||||| || || || |||||||||||||| ||||||||| | |||||||||||
Sbjct: 126 gtaccgtgaggcagccgatatcatcaagaagggtaaaatgtgctgcttgttcatcaacga 185

                                                                       
Query: 169 tcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagat 228
           |||||| |||||||| ||||| ||||| ||||| || || ||||| |||||||| |||||
Sbjct: 186 tcttgatgctggtgcaggtagaatgggaggaactacacaatacacagtcaacaatcagat 245

                                                                       
Query: 229 ggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcat 288
           ||| || || || || |||||||| || |||  ||| ||||| || || |||||||| ||
Sbjct: 246 ggttaatgctacactcatgaacattgctgataacccaaccaatgtccaactccctggaat 305

                                                                       
Query: 289 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 348
           |||| ||||||||||||||||||||||||||||| ||||||| || |||||||||||  |
Sbjct: 306 gtacgacaaggaggagaacccccgtgtgcccatcatcgtcacaggaaacgatttctcagc 365

                                                                 
Query: 349 gctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 402
            || || ||||| || ||||| |||||||||||||| |||||||||||||||||
Sbjct: 366 actatatgctccccttatccgcgatggtcgtatggaaaagttctactgggctcc 419



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                 
Query: 38 aagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatca 92
          ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| ||||
Sbjct: 1  aagggtcaaggaaaatctttccaatgtgaacttgtttttgccaagatgggaatca 55

---

>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  216 bits (109), Expect = 7e-53
 Identities = 279/333 (83%), Gaps = 2/333 (0%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ct 156
            ||||||||  ||||||||||||| |||||| ||||    |||||||||||||| ||| ||
Sbjct: 2482 atcaggcaaaggtaccgtgaggcagcagacttgattgctaagggtaagatgtg-tgctct 2540

                                                                        
Query: 157  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
             |||||||||||||| ||  | ||||| ||  | ||||| || ||||| || ||||||||
Sbjct: 2541 attcatcaacgatctggaacccggtgctggacgtatgggaggcaccacccaatacaccgt 2600

                                                                        
Query: 217  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
             |||||||||||||| |||||||| || |||||||| || ||   ||| ||||| || ||
Sbjct: 2601 aaacaaccagatggttaacgccacactcatgaacattgctgacaacccaaccaatgtcca 2660

                                                                        
Query: 277  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
             |||||||| |||||||||||| |||| ||  ||||||| |||||| | || || |||||
Sbjct: 2661 actccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgttactggtaa 2720

                                                                        
Query: 337  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
            ||||||||| ||  | |||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 2721 cgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttctactg 2780

                                             
Query: 397  ggctcccacccgtgacgaccgtatcggtgtctg 429
            ||||||||||||||| |||||||| ||||||||
Sbjct: 2781 ggctcccacccgtgaggaccgtattggtgtctg 2813



 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                        
Query: 6    agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 65
            |||| ||||||||||||||| | |||||||||||||||||||| ||||| ||||| ||||
Sbjct: 2238 agataccactcatcttgggtgtttggggaggcaagggtcaaggtaaatccttccaatgtg 2297

                             
Query: 66   agcttgtgttcgccaag 82
            |||||||||||||||||
Sbjct: 2298 agcttgtgttcgccaag 2314

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score =  212 bits (107), Expect = 1e-51
 Identities = 257/307 (83%)
 Strand = Plus / Plus

                                                                       
Query: 125 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 184
           ||||| |||| ||| || |||||||| || || |||||||||||||| || || || || 
Sbjct: 150 gacattatcaggaaaggaaagatgtgttgtctgttcatcaacgatctcgatgcaggagca 209

                                                                       
Query: 185 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 244
           ||| | ||||| |||||||| || ||||| ||||||||||| |||||||| ||||| || 
Sbjct: 210 ggtcgtatgggtggaaccacacaatacactgtcaacaaccaaatggtgaatgccacactc 269

                                                                       
Query: 245 atgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggag 304
           |||||||| || |||  ||||||||| || || |||||||| |||||||||||||| || 
Sbjct: 270 atgaacattgctgataaccccaccaatgtccaactccctggtatgtacaacaaggaagac 329

                                                                       
Query: 305 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 364
           ||  | |||||||||||| | ||||||||||| |||||||| || || || |||||||| 
Sbjct: 330 aatgctcgtgtgcccatcattgtcaccggtaatgatttctcaacactttatgctcctctc 389

                                                                       
Query: 365 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 424
           |||||||||||||||||||||||||||||||||||||| ||  | || || ||||| |||
Sbjct: 390 atccgtgatggtcgtatggagaagttctactgggctcctactagagaagatcgtattggt 449

                  
Query: 425 gtctgca 431
           |||||||
Sbjct: 450 gtctgca 456



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 39  agggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccca 98
           |||| ||||||||||| |||||   ||||||||| || ||||||||||| ||||||||||
Sbjct: 7   agggacaaggaaaatctttccaagctgagcttgtctttgccaagatgggaatcaacccca 66

              
Query: 99  tca 101
           |||
Sbjct: 67  tca 69



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 473 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 532
           |||||||| || ||||||||||| || |||||||| || || ||||||||  || | |||
Sbjct: 498 gtcaagattgttgacaccttccctggccaatccatcgatttcttcggtgcattgagggct 557

                                           
Query: 533 cgggtgtacgacgatgaggtgcgcaagtgggt 564
            | |||||||| ||||| ||| | ||||||||
Sbjct: 558 agagtgtacgatgatgaagtgaggaagtgggt 589

---

>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score =  210 bits (106), Expect = 4e-51
 Identities = 289/350 (82%)
 Strand = Plus / Plus

                                                                        
Query: 101  aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 160
            |||||| | |||||||| ||  ||||| | ||||||||||| ||||||||    || |||
Sbjct: 693  aggcagagataccgtgaagcctcagacttaatcaagaagggaaagatgtgtgttctgttc 752

                                                                        
Query: 161  atcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaac 220
            ||||| |||||||| || || || ||| |  | || |||||||| || ||||| || |||
Sbjct: 753  atcaatgatcttgatgcaggagcaggtcgtcttggtggaaccacccaatacactgtgaac 812

                                                                        
Query: 221  aaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctc 280
            |||||||||||||| ||||| || |||||||| || |||  |||||| || |||||||| 
Sbjct: 813  aaccagatggtgaatgccactctcatgaacattgctgataaccccacaaatgtgcagctt 872

                                                                        
Query: 281  cctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgat 340
            ||||| |||||||||||||| || ||| |||||||||||||| | ||||| |||||||||
Sbjct: 873  cctggtatgtacaacaaggaagataacgcccgtgtgcccatcattgtcactggtaacgat 932

                                                                        
Query: 341  ttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggct 400
            ||||| || || || |||||||| ||||||||||||||||||||||||||||||||||| 
Sbjct: 933  ttctcaacactttatgctcctctcatccgtgatggtcgtatggagaagttctactgggca 992

                                                              
Query: 401  cccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccga 450
            || ||  | || ||||| || ||||| |||||||| || |||| ||||||
Sbjct: 993  ccaacaagggaagaccgcattggtgtttgcaagggaattttccggaccga 1042



 Score =  101 bits (51), Expect = 3e-18
 Identities = 69/75 (92%)
 Strand = Plus / Plus

                                                                       
Query: 27  tctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgg 86
           |||||||||||||||| ||||||||||| ||||| ||||||||||| || ||||||||||
Sbjct: 562 tctggggaggcaagggacaaggaaaatctttccaatgtgagcttgtctttgccaagatgg 621

                          
Query: 87  gcatcaaccccatca 101
           | |||||||||||||
Sbjct: 622 gaatcaaccccatca 636

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  208 bits (105), Expect = 2e-50
 Identities = 278/333 (83%), Gaps = 2/333 (0%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ct 156
            ||||||||  ||||||||||||| |||||| ||||    |||||||||||||| ||| ||
Sbjct: 854  atcaggcaaaggtaccgtgaggcagcagacttgattgctaagggtaagatgtg-tgctct 912

                                                                        
Query: 157  cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
             |||||||||||||| ||  | ||||| ||  | ||||| || ||||| || ||||||||
Sbjct: 913  attcatcaacgatctggaacccggtgctggacgtatgggaggcaccacccaatacaccgt 972

                                                                        
Query: 217  caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
             |||||||||||||| |||||||| ||  ||||||| || ||   ||| ||||| || ||
Sbjct: 973  aaacaaccagatggttaacgccacactcctgaacattgctgacaacccaaccaatgtcca 1032

                                                                        
Query: 277  gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
             |||||||| |||||||||||| |||| ||  ||||||| |||||| | || || |||||
Sbjct: 1033 actccctggtatgtacaacaagcaggacaatgcccgtgtccccatcattgttactggtaa 1092

                                                                        
Query: 337  cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
            ||||||||| ||  | |||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 1093 cgatttctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttctactg 1152

                                             
Query: 397  ggctcccacccgtgacgaccgtatcggtgtctg 429
            ||||||||||||||| |||||||| ||||||||
Sbjct: 1153 ggctcccacccgtgaggaccgtattggtgtctg 1185



 Score =  111 bits (56), Expect = 3e-21
 Identities = 86/96 (89%)
 Strand = Plus / Plus

                                                                       
Query: 6   agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 65
           |||| ||||||||||||||| | |||||||||||||||||||| ||||| ||||| ||||
Sbjct: 705 agataccactcatcttgggtgtttggggaggcaagggtcaaggtaaatccttccaatgtg 764

                                               
Query: 66  agcttgtgttcgccaagatgggcatcaaccccatca 101
           ||||||||||||||||| | || || ||||||||||
Sbjct: 765 agcttgtgttcgccaagttaggaataaaccccatca 800



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                        
Query: 480  tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 539
            |||| ||| ||||||| |||||||| || ||||||||||| ||  || | ||||| || |
Sbjct: 1236 tcgttgacgccttccctggacaatctatcgactttttcggagcgttgagggctcgtgtat 1295

                      
Query: 540  acgacgatga 549
            ||||||||||
Sbjct: 1296 acgacgatga 1305

---

>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score =  204 bits (103), Expect = 2e-49
 Identities = 255/303 (84%), Gaps = 2/303 (0%)
 Strand = Plus / Plus

                                                                       
Query: 98  atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ct 156
           ||||||||| | |||||||| ||||||||  |||||   ||||| |||||||| ||| ||
Sbjct: 694 atcaggcagagataccgtgaagctgcagatttgatcgccaagggaaagatgtg-tgctct 752

                                                                       
Query: 157 cttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgt 216
            ||||||||||||||||| || || || ||| |  | || |||||||| || ||||| ||
Sbjct: 753 attcatcaacgatcttgatgcaggagcaggtcgtcttggtggaaccacccaatacactgt 812

                                                                       
Query: 217 caacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgca 276
            ||||||||||||||||| ||||| || |||||||| || |||  ||| || || |||||
Sbjct: 813 gaacaaccagatggtgaatgccactctcatgaacattgctgataaccctacaaatgtgca 872

                                                                       
Query: 277 gctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaa 336
           ||| ||||| |||||||||||||| |||||| |||||||||||||| | |||||||||||
Sbjct: 873 gcttcctggtatgtacaacaaggaagagaacgcccgtgtgcccatcattgtcaccggtaa 932

                                                                       
Query: 337 cgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactg 396
            |||||||| ||||| || |||||||| || |||||||| ||||||||||||||||||||
Sbjct: 933 tgatttctcaacgctgtatgctcctctcattcgtgatgggcgtatggagaagttctactg 992

              
Query: 397 ggc 399
           |||
Sbjct: 993 ggc 995



 Score =  101 bits (51), Expect = 3e-18
 Identities = 72/79 (91%)
 Strand = Plus / Plus

                                                                       
Query: 23  ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 82
           |||||||||||||||||||| |||||||| || ||||| ||||||||||| || ||||||
Sbjct: 562 ggtatctggggaggcaagggacaaggaaagtctttccaatgtgagcttgtctttgccaag 621

                              
Query: 83  atgggcatcaaccccatca 101
           ||||| |||||||||||||
Sbjct: 622 atgggaatcaaccccatca 640

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score =  198 bits (100), Expect = 2e-47
 Identities = 331/408 (81%)
 Strand = Plus / Plus

                                                                       
Query: 146 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 205
           ||||| |||||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 55  atgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 114

                                                                       
Query: 206 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 265
           || ||||| |||||||||||||||||||| ||||| || ||||||||||| |||  ||| 
Sbjct: 115 caatacactgtcaacaaccagatggtgaatgccactctcatgaacatcgctgataacccg 174

                                                                       
Query: 266 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 325
           || || || |||||||| || |||||||||||| | |||||| || | || |||||  | 
Sbjct: 175 acaaatgtccagctccccggtatgtacaacaagcaagagaacgccagggtccccattatt 234

                                                                       
Query: 326 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 385
           ||||| |||||||| ||||| ||  | || |||||||| |||||||||||||||||||||
Sbjct: 235 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 294

                                                                       
Query: 386 aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 445
           |||||||| ||||| || ||  | || ||  | || ||||| ||||||||||| |||  |
Sbjct: 295 aagttctattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcagg 354

                                                                       
Query: 446 accgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatcc 505
           |||||||| ||   ||| ||  |||| || ||||| ||||| |||||||| |||||||| 
Sbjct: 355 accgacaacgtgcctgaggaagctgttgtaaagattgtcgataccttccctggacaatct 414

                                                           
Query: 506 attgactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 553
           |||||||| || ||||||||| | || || || ||||| |||||||||
Sbjct: 415 attgacttctttggtgctctgagggcacgagtatacgatgatgaggtg 462

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score =  198 bits (100), Expect = 2e-47
 Identities = 259/312 (83%)
 Strand = Plus / Plus

                                                                        
Query: 134  aagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatg 193
            |||||||| |||||||||| |||||||||||||||||| ||||||||||| ||  | |||
Sbjct: 1550 aagaagggcaagatgtgctccctcttcatcaacgatctggacgctggtgctggccgcatg 1609

                                                                        
Query: 194  ggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatc 253
            |||     ||| |||||||| ||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 1610 ggcatgggcacccagtacactgtcaacaaccagatggtcaacgctaccctcatgaacatc 1669

                                                                        
Query: 254  gccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgt 313
            || |||  ||| |||||||||||||| || ||| |||||||  ||| | |||  ||||||
Sbjct: 1670 gctgataaccctaccaacgtgcagctgcccggcgtgtacaaggaggtgcagattccccgt 1729

                                                                        
Query: 314  gtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgat 373
            || ||||| |||  ||| |||||||||||||| || || ||||| || || |||||||| 
Sbjct: 1730 gttcccattgtctgcacgggtaacgatttctccaccctgtacgcccccctcatccgtgac 1789

                                                                        
Query: 374  ggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaag 433
            || || |||||||||| |||||||   ||||||||||| ||||| ||||| ||||||| |
Sbjct: 1790 ggccgcatggagaagtactactggaaccccacccgtgaggaccgcatcggcgtctgcatg 1849

                        
Query: 434  ggtatcttccag 445
            || |||||||||
Sbjct: 1850 ggaatcttccag 1861



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 14   ctcatcttgggtatctggggaggcaagggtcaaggaaa 51
            |||||| ||||||||||||| |||||||| || |||||
Sbjct: 1215 ctcatcctgggtatctggggtggcaagggccagggaaa 1252

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score =  196 bits (99), Expect = 6e-47
 Identities = 276/335 (82%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
            ||||||||  |||| ||||| || || || || ||||||||||| || ||||||||||| 
Sbjct: 685  atcaggcaaaggtatcgtgaagcagctgatatcatcaagaagggaaaaatgtgctgcctg 744

                                                                        
Query: 158  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
            || ||||||||||| || || || || ||| | ||||| ||||| || || ||||| || 
Sbjct: 745  tttatcaacgatctcgatgccggagctggtcgtatgggtggaacaactcaatacactgtt 804

                                                                        
Query: 218  aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
            ||||| ||||||||||| |||||||| |||||||| || ||   ||| || || || |||
Sbjct: 805  aacaatcagatggtgaatgccaccctcatgaacatagctgacaacccaacaaatgtccag 864

                                                                        
Query: 278  ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
            || |||||||||||||||||||| |||||||| ||||| |||||| | ||||| ||||||
Sbjct: 865  cttcctggcatgtacaacaaggaagagaaccctcgtgttcccatcattgtcactggtaac 924

                                                                        
Query: 338  gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
            || ||||| ||  | || || ||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 925  gacttctcaacattgtatgcccctcttatccgtgatggccgtatggagaaattctactgg 984

                                               
Query: 398  gctcccacccgtgacgaccgtatcggtgtctgcaa 432
            || |||||| | || |||||||| |||||||||||
Sbjct: 985  gcacccaccagggaggaccgtattggtgtctgcaa 1019



 Score =  113 bits (57), Expect = 7e-22
 Identities = 78/85 (91%)
 Strand = Plus / Plus

                                                                       
Query: 17  atcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttc 76
           ||||||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || 
Sbjct: 547 atcttgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgttttt 606

                                    
Query: 77  gccaagatgggcatcaaccccatca 101
           ||||||||||| |||||||||||||
Sbjct: 607 gccaagatgggaatcaaccccatca 631

---

>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score =  192 bits (97), Expect = 9e-46
 Identities = 283/345 (82%)
 Strand = Plus / Plus

                                                                       
Query: 98  atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
           |||||||| ||||  |||||||| || ||||| ||||||||||| |||||||  ||||| 
Sbjct: 528 atcaggcaacggtgtcgtgaggcggccgacatcatcaagaagggaaagatgtcttgccta 587

                                                                       
Query: 158 ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
           || ||||| |||||||| || ||||| |||||| | || || || || || ||||| || 
Sbjct: 588 tttatcaatgatcttgatgcaggtgccggtaggcttggtgggacaactcaatacactgtg 647

                                                                       
Query: 218 aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
           |||||||| |||||||| || ||||| |||||||| || ||    || ||||| || |||
Sbjct: 648 aacaaccaaatggtgaatgctaccctcatgaacattgctgacaatccaaccaatgttcag 707

                                                                       
Query: 278 ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
           ||||| || |||||||||||||| ||||| || ||||| || ||| ||||||| ||||| 
Sbjct: 708 ctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatcgtcacaggtaat 767

                                                                       
Query: 338 gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
           || ||||||||  | ||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 768 gacttctcgacattgtacgctcctctcattcgtgatggtcgtatggagaaattctactgg 827

                                                        
Query: 398 gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 442
           || |||||| | || ||||| || ||||||||||  |||||||||
Sbjct: 828 gcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 872



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                       
Query: 14  ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 73
           ||||| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||| 
Sbjct: 186 ctcattttgggtatctggggaggtaaaggtcaaggtaaatctttccagtgtgagcttgtc 245

                               
Query: 74  ttcgccaagatgggcatcaa 93
           || ||||||||||| |||||
Sbjct: 246 tttgccaagatgggaatcaa 265

---

>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score =  192 bits (97), Expect = 9e-46
 Identities = 283/345 (82%)
 Strand = Plus / Plus

                                                                        
Query: 98   atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
            |||||||| ||||  |||||||| || ||||| ||||||||||| |||||||  ||||| 
Sbjct: 701  atcaggcaacggtgtcgtgaggcggccgacatcatcaagaagggaaagatgtcttgccta 760

                                                                        
Query: 158  ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
            || ||||| |||||||| || ||||| |||||| | || || || || || ||||| || 
Sbjct: 761  tttatcaatgatcttgatgcaggtgccggtaggcttggtgggacaactcaatacactgtg 820

                                                                        
Query: 218  aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
            |||||||| |||||||| || ||||| |||||||| || ||    || ||||| || |||
Sbjct: 821  aacaaccaaatggtgaatgctaccctcatgaacattgctgacaatccaaccaatgttcag 880

                                                                        
Query: 278  ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
            ||||| || |||||||||||||| ||||| || ||||| || ||| ||||||| ||||| 
Sbjct: 881  ctcccgggtatgtacaacaaggaagagaatccacgtgtaccgatcatcgtcacaggtaat 940

                                                                        
Query: 338  gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
            || ||||||||  | ||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 941  gacttctcgacattgtacgctcctctcattcgtgatggtcgtatggagaaattctactgg 1000

                                                         
Query: 398  gctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttc 442
            || |||||| | || ||||| || ||||||||||  |||||||||
Sbjct: 1001 gcgcccaccagagaagaccgaattggtgtctgcactggtatcttc 1045



 Score =  111 bits (56), Expect = 3e-21
 Identities = 80/88 (90%)
 Strand = Plus / Plus

                                                                       
Query: 14  ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 73
           ||||| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||| 
Sbjct: 560 ctcattttgggtatctggggaggtaaaggtcaaggtaaatctttccagtgtgagcttgtc 619

                                       
Query: 74  ttcgccaagatgggcatcaaccccatca 101
           || ||||||||||| |||||||||||||
Sbjct: 620 tttgccaagatgggaatcaaccccatca 647

---

>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
           activase (Rca) gene, partial sequence
          Length = 648

 Score =  182 bits (92), Expect = 9e-43
 Identities = 209/248 (84%)
 Strand = Plus / Plus

                                                                       
Query: 210 acaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacca 269
           |||| ||||||||||||||||| ||||||||||| |||||||| || ||   ||| ||||
Sbjct: 1   acactgtcaacaaccagatggttaacgccaccctcatgaacattgctgacaacccaacca 60

                                                                       
Query: 270 acgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtca 329
           | || ||||||||||| |||||||||||| |||| ||  | ||||| |||||| |||| |
Sbjct: 61  atgtccagctccctggtatgtacaacaagcaggacaatgctcgtgtacccatcatcgtta 120

                                                                       
Query: 330 ccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagt 389
           | |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||||| |
Sbjct: 121 ctggtaacgacttctctaccttgtatgctcctctcatccgtgatggtcgtatggagaaat 180

                                                                       
Query: 390 tctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccg 449
           |||||||||| ||||| ||||| |||||||| ||||| ||||  |||||||||  ||| |
Sbjct: 181 tctactgggcacccactcgtgaggaccgtattggtgtttgcactggtatcttcaggactg 240

                   
Query: 450 acaatgtc 457
           ||||||||
Sbjct: 241 acaatgtc 248

---

>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
            (pJQ4)
          Length = 1655

 Score =  178 bits (90), Expect = 1e-41
 Identities = 324/402 (80%)
 Strand = Plus / Plus

                                                                        
Query: 152  tgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtac 211
            |||||||||||||||||||| || || || || ||||| ||||| ||||| || || |||
Sbjct: 705  tgcctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacccaatac 764

                                                                        
Query: 212  accgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaac 271
            || |||||||||||||||||||| ||||| || |||||||| || |||  ||| || |||
Sbjct: 765  actgtcaacaaccagatggtgaatgccactctcatgaacattgctgataacccgacaaac 824

                                                                        
Query: 272  gtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcacc 331
            || |||||||| || |||||||||||| | |||||| || | || |||||  | ||||| 
Sbjct: 825  gtccagctccccggtatgtacaacaagcaagagaacgccagagtccccattattgtcact 884

                                                                        
Query: 332  ggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttc 391
            |||||||| ||||| ||  | || |||||||| |||||||||||||||||||||||||||
Sbjct: 885  ggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggagaagttc 944

                                                                        
Query: 392  tactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgac 451
            || ||||| || ||  | || ||  | || ||||| ||||||||||| |||  |||||||
Sbjct: 945  tattgggcaccaactagggaagatagaattggtgtttgcaagggtattttcaggaccgac 1004

                                                                        
Query: 452  aatgtcagtgacgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgac 511
            || ||   ||| ||  | ||  | ||||| ||||| |||||||| |||||||| ||||||
Sbjct: 1005 aacgtgcctgaggaagccgttataaagattgtcgataccttccctggacaatctattgac 1064

                                                      
Query: 512  tttttcggtgctctgcgtgctcgggtgtacgacgatgaggtg 553
            || || ||||||||| | || || || ||||| |||||||||
Sbjct: 1065 ttctttggtgctctgagggcacgagtatacgatgatgaggtg 1106



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 76/86 (88%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           |||||||| |||||| ||||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 507 ccactcattttgggtgtctggggaggcaaaggtcaaggtaaatctttccagtgtgagctt 566

                                     
Query: 71  gtgttcgccaagatgggcatcaaccc 96
           || |||   |||||||| ||||||||
Sbjct: 567 gtcttcagaaagatgggaatcaaccc 592

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase mRNA, complete cds
          Length = 1693

 Score =  176 bits (89), Expect = 6e-41
 Identities = 263/321 (81%)
 Strand = Plus / Plus

                                                                       
Query: 125 gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 184
           ||||| |||||||||||    |||||||  || |||||||||||||| ||||| ||||| 
Sbjct: 612 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 671

                                                                       
Query: 185 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 244
           ||  | |||||||  ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 672 ggccgcatgggcgacaccacccagtacaccgtgaacaaccagatggtgaacgccaccctg 731

                                                                       
Query: 245 atgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggag 304
           ||||||||||||||   ||| |||||||| ||||| || ||  ||||||| || ||||||
Sbjct: 732 atgaacatcgccgacaacccgaccaacgtccagctgcccggtgtgtacaagaacgaggag 791

                                                                       
Query: 305 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 364
           | ||| || |||||||| ||   ||| || ||||| ||||| || || ||||| || |||
Sbjct: 792 atccctcgcgtgcccattgtgtgcacgggcaacgacttctccaccctgtacgcgcccctg 851

                                                                       
Query: 365 atccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggt 424
           ||||| ||||| || |||||||||| |||||||   |||||||| || ||||| ||||| 
Sbjct: 852 atccgcgatggccgcatggagaagtactactggaaccccacccgcgaggaccgcatcggc 911

                                
Query: 425 gtctgcaagggtatcttccag 445
           || |||| ||| |||||||||
Sbjct: 912 gtgtgcatgggcatcttccag 932



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 485  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 544
            ||||||||||| || || ||||||||||| ||||| || |||||||| || |||||||||
Sbjct: 972  gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 1031

              
Query: 545  ga 546
            ||
Sbjct: 1032 ga 1033

---

>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score =  170 bits (86), Expect = 3e-39
 Identities = 212/254 (83%)
 Strand = Plus / Plus

                                                                       
Query: 146 atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 205
           ||||| || ||||||||||||||||| || || || || ||||| ||||| ||||| || 
Sbjct: 710 atgtgttgtctcttcatcaacgatctcgatgcaggagctggtagaatgggtggaactacc 769

                                                                       
Query: 206 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 265
           || |||||||||||||||||||||||||| |||||||| |||||||| || ||   ||| 
Sbjct: 770 caatacaccgtcaacaaccagatggtgaatgccaccctcatgaacattgctgacaaccca 829

                                                                       
Query: 266 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 325
           || || || |||||||| || |||||||||||| | |||||| || | || |||||  | 
Sbjct: 830 acaaatgtccagctccccggtatgtacaacaagcaagagaacgccagggtacccattatt 889

                                                                       
Query: 326 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 385
           ||||| |||||||| ||||| ||  | || |||||||| |||||||||||||||||||||
Sbjct: 890 gtcactggtaacgacttctccacattgtatgctcctcttatccgtgatggtcgtatggag 949

                         
Query: 386 aagttctactgggc 399
           ||||||||||||||
Sbjct: 950 aagttctactgggc 963



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 79/89 (88%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           ||||||||||||||| | ||||||||||| |||||||| ||||||||||| |||||||||
Sbjct: 518 ccactcatcttgggtgtatggggaggcaaaggtcaaggtaaatcattccaatgtgagctt 577

                                        
Query: 71  gtgttcgccaagatgggcatcaaccccat 99
           || |||   |||||||| |||||||||||
Sbjct: 578 gtcttcagaaagatgggaatcaaccccat 606

---

>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  159 bits (80), Expect = 1e-35
 Identities = 101/108 (93%)
 Strand = Plus / Plus

                                                                       
Query: 509 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 568
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |
Sbjct: 2   gactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacc 61

                                                           
Query: 569 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggac 616
           |||||||| ||||||||||||||||||| ||| |||||||||||||||
Sbjct: 62  tctaccggtatcgagaacattggcaagaagcttgtgaactcgcgggac 109

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score =  149 bits (75), Expect = 1e-32
 Identities = 216/263 (82%)
 Strand = Plus / Plus

                                                                       
Query: 137 aagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggc 196
           ||||| || ||||| |||||||||||||||||||| || || || || ||||| ||||| 
Sbjct: 720 aagggaaatatgtgttgcctcttcatcaacgatctcgatgcaggagctggtagaatgggt 779

                                                                       
Query: 197 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 256
           ||||| || || ||||| ||||||||||| |||||||| ||||| || |||||||| || 
Sbjct: 780 ggaactacccaatacactgtcaacaaccaaatggtgaatgccactctcatgaacattgct 839

                                                                       
Query: 257 gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtg 316
           ||   ||| || || || |||||||| || |||||||||||| | |||||  || | || 
Sbjct: 840 gacaacccgacaaatgtccagctccccggtatgtacaacaagcaagagaatgccagggtc 899

                                                                       
Query: 317 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 376
           || ||  ||||||| |||||||||||||| ||  | || ||||| || ||||||||||||
Sbjct: 900 cctattatcgtcactggtaacgatttctccacattgtatgctccacttatccgtgatggt 959

                                  
Query: 377 cgtatggagaagttctactgggc 399
           |||||||||||||||||||||||
Sbjct: 960 cgtatggagaagttctactgggc 982



 Score =  105 bits (53), Expect = 2e-19
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           ||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| |||
Sbjct: 537 ccacttatcttgggtatctggggaggcaaaggtcaaggcaaatcattccagtgtgaactt 596

                                        
Query: 71  gtgttcgccaagatgggcatcaaccccat 99
           || |||   |||||||| |||||||||||
Sbjct: 597 gtcttcagaaagatgggaatcaaccccat 625

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score =  139 bits (70), Expect = 1e-29
 Identities = 244/302 (80%)
 Strand = Plus / Plus

                                                                       
Query: 98  atcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctc 157
           ||||||||  ||||| | ||||| || || || |||| |||||| || ||||| ||||||
Sbjct: 698 atcaggcaaaggtacagagaggccgcggaaatcatcaggaagggaaacatgtgttgcctc 757

                                                                       
Query: 158 ttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtc 217
           ||||||||||||||||| || || || ||||| ||||| ||||| || || ||||| |||
Sbjct: 758 ttcatcaacgatcttgatgcaggagccggtagaatgggtggaactacacaatacactgtc 817

                                                                       
Query: 218 aacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcag 277
           |||||||| |||||||| || || || |||||||| || |||  ||| || || || || 
Sbjct: 818 aacaaccaaatggtgaatgctacactcatgaacattgctgataacccgacgaatgtccaa 877

                                                                       
Query: 278 ctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaac 337
           ||||| || |||||||||||| | |||||  || | || || ||  | ||||| ||||||
Sbjct: 878 ctccccggtatgtacaacaagcaagagaatgccagggtacctattattgtcactggtaac 937

                                                                       
Query: 338 gatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgg 397
           |||||||| ||  | || || ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 938 gatttctccacattgtatgcacctcttatccgtgatggtcgtatggagaaattctactgg 997

             
Query: 398 gc 399
           ||
Sbjct: 998 gc 999



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                       
Query: 11  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 70
           ||||| || |||||| | |||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 554 ccacttattttgggtgtttggggaggaaaaggtcaaggtaaatcattccaatgtgagctt 613

                                     
Query: 71  gtgttcgccaagatgggcatcaaccc 96
           || |||   |||||||| ||||||||
Sbjct: 614 gtcttcagaaagatgggaatcaaccc 639



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 473  gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 526
            |||||||||||||| | |||||| |||||||| ||||| || ||||||||||||
Sbjct: 1073 gtcaagatcgtcgatagcttccctggacaatctattgatttcttcggtgctctg 1126

---

>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence
          Length = 253

 Score =  133 bits (67), Expect = 8e-28
 Identities = 124/143 (86%)
 Strand = Plus / Plus

                                                                       
Query: 289 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 348
           ||||||||| || |||||||||||||||||| || | ||||||||||| |||||||| ||
Sbjct: 1   gtacaacaaagaagagaacccccgtgtgcccgtcattgtcaccggtaatgatttctccac 60

                                                                       
Query: 349 gctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccg 408
             | || ||||| || ||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 61  cttgtatgctccccttatccgtgatggtcgtatggagaaattctactgggcaccaacccg 120

                                  
Query: 409 tgacgaccgtatcggtgtctgca 431
            ||||| ||||| ||||||||||
Sbjct: 121 cgacgatcgtattggtgtctgca 143

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score =  123 bits (62), Expect = 7e-25
 Identities = 116/134 (86%)
 Strand = Plus / Plus

                                                                        
Query: 125  gacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcg 184
            ||||| |||||||||||    |||||||  || |||||||||||||| ||||| ||||| 
Sbjct: 1824 gacatcatcaagaagggccgcatgtgctcgctgttcatcaacgatctggacgccggtgcc 1883

                                                                        
Query: 185  ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 244
            ||  | |||||||  ||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 1884 ggccgcatgggcgacaccacccagtacaccgtgaacaaccagatggtgaacgccaccctg 1943

                          
Query: 245  atgaacatcgccga 258
            ||||||||||||||
Sbjct: 1944 atgaacatcgccga 1957



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 485  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 544
            ||||||||||| || || ||||||||||| ||||| || |||||||| || |||||||||
Sbjct: 2662 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 2721

              
Query: 545  ga 546
            ||
Sbjct: 2722 ga 2723

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score =  117 bits (59), Expect = 4e-23
 Identities = 245/307 (79%)
 Strand = Plus / Minus

                                                                        
Query: 108  ggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacg 167
            |||||||||||||  | ||||| ||||  || || ||||||||||| ||||||||||| |
Sbjct: 7198 ggtaccgtgaggcgtccgacattatcagaaaaggaaagatgtgctgtctcttcatcaatg 7139

                                                                        
Query: 168  atcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccaga 227
            ||||||| || || || ||||| ||||| || || || || ||||| |||||||||||||
Sbjct: 7138 atcttgatgcaggagctggtagaatgggtggcactactcaatacacagtcaacaaccaga 7079

                                                                        
Query: 228  tggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggca 287
            |||| || || ||||| |||||||| || ||   ||| ||||| || || || || || |
Sbjct: 7078 tggtaaatgcaaccctcatgaacattgctgacaaccctaccaatgttcaacttcccggta 7019

                                                                        
Query: 288  tgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcga 347
            |||||||||| || |||||  |||| || || ||| ||||||| || || || ||||| |
Sbjct: 7018 tgtacaacaaagaagagaatgcccgcgtccctatcatcgtcactggcaatgacttctcta 6959

                                                                        
Query: 348  cgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccaccc 407
            || | || |||||| | || |||||||| |||||||| || ||||||||||| || || |
Sbjct: 6958 cgttgtatgctcctttaattcgtgatggacgtatggaaaaattctactgggcacctactc 6899

                   
Query: 408  gtgacga 414
            |||||||
Sbjct: 6898 gtgacga 6892



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 69/79 (87%)
 Strand = Plus / Minus

                                                                        
Query: 14   ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 73
            ||||| ||||| || ||||||||||| ||||||||||| ||||| || ||||||||||| 
Sbjct: 7532 ctcatattgggcatttggggaggcaaaggtcaaggaaagtcatttcaatgtgagcttgta 7473

                               
Query: 74   ttcgccaagatgggcatca 92
            || ||||||||||| ||||
Sbjct: 7472 tttgccaagatgggaatca 7454

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score =  117 bits (59), Expect = 4e-23
 Identities = 176/215 (81%)
 Strand = Plus / Plus

                                                                       
Query: 185 ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 244
           ||||| ||||| ||||| || || ||||| ||||||||||| |||||||| ||||| || 
Sbjct: 8   ggtagaatgggtggaactacccaatacactgtcaacaaccaaatggtgaatgccactctc 67

                                                                       
Query: 245 atgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggag 304
           |||||||| || ||   ||| || || || |||||||| || |||||||||||| | |||
Sbjct: 68  atgaacattgctgacaacccgacaaatgtccagctccccggtatgtacaacaagcaagag 127

                                                                       
Query: 305 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 364
           ||  || | || || ||  ||||||| |||||||||||||| ||  | || ||||| || 
Sbjct: 128 aatgccagggtccctattatcgtcactggtaacgatttctccacattgtatgctccactt 187

                                              
Query: 365 atccgtgatggtcgtatggagaagttctactgggc 399
           |||||||||||||||||||||||||||||||||||
Sbjct: 188 atccgtgatggtcgtatggagaagttctactgggc 222



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 473 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 522
           |||||||| || || | |||||| |||||||| || ||||||||||||||
Sbjct: 296 gtcaagattgttgataacttccctggacaatctatcgactttttcggtgc 345

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 230/290 (79%)
 Strand = Plus / Plus

                                                                        
Query: 131  atcaagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtagg 190
            |||||||| || || ||||| || || || |||||||||||||| ||||| || || |||
Sbjct: 729  atcaagaaagggaaaatgtgttgtctatttatcaacgatcttgatgctggagctggaagg 788

                                                                        
Query: 191  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 250
             | || || || || |||||||| || || ||||||||||| || || || || ||||||
Sbjct: 789  cttggtgggactacccagtacacagtgaataaccagatggtaaatgctactcttatgaac 848

                                                                        
Query: 251  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 310
            || || ||   ||| ||||| |||||||| || |||||||| |||||||| || || |||
Sbjct: 849  attgctgacaacccaaccaatgtgcagctaccaggcatgtataacaaggaagaaaatccc 908

                                                                        
Query: 311  cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 370
             | || |||||| | || || |||||||| ||||| ||| | || || ||||| || |||
Sbjct: 909  agagttcccatcatagtaactggtaacgacttctcaacgttatatgcacctctcattcgt 968

                                                              
Query: 371  gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtat 420
            |||||||| ||||| || |||||||||||||| || ||||| || |||||
Sbjct: 969  gatggtcggatggataaattctactgggctccaactcgtgaagatcgtat 1018



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 29  tggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggc 88
           |||||||| || ||||||||||| || ||||||||||| ||||| || || |||||||| 
Sbjct: 570 tggggaggtaaaggtcaaggaaagtctttccagtgtgaacttgtatttgctaagatggga 629

                   
Query: 89  atcaaccc 96
           ||||||||
Sbjct: 630 atcaaccc 637



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                        
Query: 482  gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 541
            |||||||||||||||||||| || || ||||| || |||||| || | ||||| || || 
Sbjct: 1080 gtcgacaccttcccaggacagtcaatagacttctttggtgctttgagagctcgagtttat 1139

                                  
Query: 542  gacgatgaggtgcgcaagtggg 563
            |||||||| ||| | |||||||
Sbjct: 1140 gacgatgaagtgagaaagtggg 1161

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                          
Query: 206    cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 265
              |||||||||||||||| |||  |||||| ||||||||||||||||||||||||   ||||
Sbjct: 445720 cagtacaccgtcaacacccaactggtgagcgccaccctgatgaacatcgccgacaacccc 445661

                            
Query: 266    accaacgtgcagct 279
              ||||||||||||||
Sbjct: 445660 accaacgtgcagct 445647

---

>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 155/192 (80%)
 Strand = Plus / Plus

                                                                       
Query: 206 cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 265
           |||||||| || |||||||||||||| || |||||||| |||||||| || |||  ||| 
Sbjct: 487 cagtacactgtgaacaaccagatggtcaatgccaccctcatgaacattgctgataaccca 546

                                                                       
Query: 266 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 325
           || || || ||| | ||||| |||||||||||||| || || || ||||| || || || 
Sbjct: 547 acgaatgttcagttgcctggaatgtacaacaaggaagaaaatcctcgtgttccaattgtt 606

                                                                       
Query: 326 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 385
           || || || || |||||||| ||  | || |||||  |||| |||||||| |||||||||
Sbjct: 607 gtgacaggaaatgatttctcaactttgtatgctccattgattcgtgatgggcgtatggag 666

                       
Query: 386 aagttctactgg 397
           ||||||||||||
Sbjct: 667 aagttctactgg 678



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                             
Query: 23  ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgt 72
           ||||| ||||||||||||||||||||||| || ||||| |||||||||||
Sbjct: 247 ggtatttggggaggcaagggtcaaggaaagtccttccaatgtgagcttgt 296

---

>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                          
Query: 23     ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 82
              |||||||||||||| || |||||||||||||| |||||   ||||||||| || ||||||
Sbjct: 104933 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 104874

                         
Query: 83     atgggcatcaa 93
              |||||||||||
Sbjct: 104873 atgggcatcaa 104863



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 199/254 (78%)
 Strand = Plus / Minus

                                                                          
Query: 146    atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 205
              ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 104078 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 104019

                                                                          
Query: 206    cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 265
              |||||||| || ||||| || ||||| || || || || |||||||| || |||  ||| 
Sbjct: 104018 cagtacacagtgaacaatcaaatggtaaatgcaacacttatgaacattgctgataaccca 103959

                                                                          
Query: 266    accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 325
              || || || || || ||||| ||||| ||||| || |||||  | |||||||| ||| | 
Sbjct: 103958 acaaatgttcaacttcctggtatgtataacaaagaagagaatgcacgtgtgcctatcatt 103899

                                                                          
Query: 326    gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 385
              || || ||||| ||||| || ||  | || |||||||| || ||||| ||||||||||||
Sbjct: 103898 gttactggtaatgatttttcaacattgtatgctcctcttattcgtgacggtcgtatggag 103839

                            
Query: 386    aagttctactgggc 399
              || ||||| |||||
Sbjct: 103838 aaattctattgggc 103825

---

>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 23    ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 82
             |||||||||||||| || |||||||||||||| |||||   ||||||||| || ||||||
Sbjct: 83958 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 83899

                        
Query: 83    atgggcatcaa 93
             |||||||||||
Sbjct: 83898 atgggcatcaa 83888



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 199/254 (78%)
 Strand = Plus / Minus

                                                                         
Query: 146   atgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggcggaaccacg 205
             ||||| || |||||||| ||||||||||| || || || ||| | ||||| ||||| || 
Sbjct: 83103 atgtgttgtctcttcataaacgatcttgatgcaggagccggtcgtatgggtggaacaaca 83044

                                                                         
Query: 206   cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 265
             |||||||| || ||||| || ||||| || || || || |||||||| || |||  ||| 
Sbjct: 83043 cagtacacagtgaacaatcaaatggtaaatgcaacacttatgaacattgctgataaccca 82984

                                                                         
Query: 266   accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 325
             || || || || || ||||| ||||| ||||| || |||||  | |||||||| ||| | 
Sbjct: 82983 acaaatgttcaacttcctggtatgtataacaaagaagagaatgcacgtgtgcctatcatt 82924

                                                                         
Query: 326   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 385
             || || ||||| ||||| || ||  | || |||||||| || ||||| ||||||||||||
Sbjct: 82923 gttactggtaatgatttttcaacattgtatgctcctcttattcgtgacggtcgtatggag 82864

                           
Query: 386   aagttctactgggc 399
             || ||||| |||||
Sbjct: 82863 aaattctattgggc 82850

---

>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence
          Length = 262

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 136/170 (80%)
 Strand = Plus / Plus

                                                                       
Query: 137 aagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtaggatgggc 196
           ||||| ||||||||   |||||||||||| |||||||| || || || |||||  | || 
Sbjct: 19  aaggggaagatgtgtgtcctcttcatcaatgatcttgatgcaggggctggtagacttggt 78

                                                                       
Query: 197 ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 256
           ||||| || || || || ||||| |||||||||||||| || ||||| |||||||| || 
Sbjct: 79  ggaactacacaatatacagtcaataaccagatggtgaatgcaacccttatgaacattgct 138

                                                             
Query: 257 gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaa 306
           |||   || || || || ||||||||||| |||||||||||  |||||||
Sbjct: 139 gataatccaactaatgttcagctccctggtatgtacaacaaacaggagaa 188

---

>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete
           cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 326 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 385
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 386 aagttctactgg 397
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1299

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 326 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 385
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924

                       
Query: 386 aagttctactgg 397
           ||||||||||||
Sbjct: 925 aagttctactgg 936

---

>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 326 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 385
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 386 aagttctactgg 397
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1496

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 326 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 385
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932

                       
Query: 386 aagttctactgg 397
           ||||||||||||
Sbjct: 933 aagttctactgg 944

---

>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-D21
          Length = 1447

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 326 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 385
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945

                       
Query: 386 aagttctactgg 397
           ||||||||||||
Sbjct: 946 aagttctactgg 957

---

>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 326   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 385
             ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627

                         
Query: 386   aagttctactgg 397
             ||||||||||||
Sbjct: 97626 aagttctactgg 97615

---

>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1426

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 335 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 394
           ||||||||||| || || || ||||| ||||||||||| ||  | |||||||||||||||
Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995

              
Query: 395 tgg 397
           |||
Sbjct: 996 tgg 998

---

>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 475  caagatcgtcgacaccttccc 495
            |||||||||||||||||||||
Sbjct: 3673 caagatcgtcgacaccttccc 3653

---

>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 593

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 326 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 384
           ||||| || ||||||||||| || || || |||| | ||||||||||| ||  | |||||
Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195

                        
Query: 385 gaagttctactgg 397
           |||||||||||||
Sbjct: 196 gaagttctactgg 208

---

>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence
          Length = 98713

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 422   ggtgtctgcaagggtatcttccag 445
             |||||||||||||||||| |||||
Sbjct: 67265 ggtgtctgcaagggtatcatccag 67288

---

>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B
          Length = 1010

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 458 agtgacgagtctgtcgtcaa 477
           ||||||||||||||||||||
Sbjct: 308 agtgacgagtctgtcgtcaa 289

---

>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete
             sequence
          Length = 101284

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ttccagtgtgagcttgtgtt 75
             ||||||||||||||||||||
Sbjct: 97287 ttccagtgtgagcttgtgtt 97268

---

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 407     cgtgacgaccgtatcggtgt 426
               ||||||||||||||||||||
Sbjct: 3056327 cgtgacgaccgtatcggtgt 3056308

---

>ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2739

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 243  tgatgaacatcgccgatgcc 262
            ||||||||||||||||||||
Sbjct: 1896 tgatgaacatcgccgatgcc 1877

---

>ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 243  tgatgaacatcgccgatgcc 262
            ||||||||||||||||||||
Sbjct: 1897 tgatgaacatcgccgatgcc 1878

---

>gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence
          Length = 42802

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 243   tgatgaacatcgccgatgcc 262
             ||||||||||||||||||||
Sbjct: 34318 tgatgaacatcgccgatgcc 34337

---

>ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302
           (ENSANGG00000011813), partial mRNA
          Length = 1773

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 75  tcgccaagatgggcatcaac 94
           ||||||||||||||||||||
Sbjct: 641 tcgccaagatgggcatcaac 660

---

>gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein precursor (APL-1) mRNA
            complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 243  tgatgaacatcgccgatgcc 262
            ||||||||||||||||||||
Sbjct: 1882 tgatgaacatcgccgatgcc 1863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,758,915
Number of Sequences: 3902068
Number of extensions: 3758915
Number of successful extensions: 71068
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70667
Number of HSP's gapped (non-prelim): 358
length of query: 616
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 593
effective length of database: 17,143,297,704
effective search space: 10165975538472
effective search space used: 10165975538472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---