| Clone Name | baal40a09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CR361553.4| Mouse DNA sequence from clone RP24-456I14 on chromosome X, complete sequence Length = 52670 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gctactattacaatctagta 55 |||||||||||||||||||| Sbjct: 37919 gctactattacaatctagta 37900
>emb|AL772378.8| Mouse DNA sequence from clone RP23-106C4 on chromosome X, complete sequence Length = 109193 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 atggaggtgtatatttgttc 80 |||||||||||||||||||| Sbjct: 60134 atggaggtgtatatttgttc 60115
>emb|AJ421480.1| Mus musculus X-inactivation center region; segment 3/3 Length = 214384 Score = 40.1 bits (20), Expect = 1.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 atggaggtgtatatttgttc 80 |||||||||||||||||||| Sbjct: 89448 atggaggtgtatatttgttc 89467
>gb|AC008221.5| Drosophila melanogaster clone BACR30B13, complete sequence Length = 184278 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 tgaattggatggtacacat 110 ||||||||||||||||||| Sbjct: 82537 tgaattggatggtacacat 82519
>gb|BT012769.1| Lycopersicon esculentum clone 113739R, mRNA sequence Length = 600 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 24 acatgagtagctgctacta 42 ||||||||||||||||||| Sbjct: 103 acatgagtagctgctacta 121
>gb|AC145805.2| Xenopus tropicalis clone CH216-85O8, complete sequence Length = 166207 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 agtattcacgatgaattgg 99 ||||||||||||||||||| Sbjct: 38668 agtattcacgatgaattgg 38686
>gb|AC012046.11| Homo sapiens chromosome 10 clone RP11-312P12, complete sequence Length = 198781 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 43 ttacaatctagtaagtaaa 61 ||||||||||||||||||| Sbjct: 128092 ttacaatctagtaagtaaa 128110
>gb|AC073372.9| Homo sapiens chromosome 11 clone RP11-500D4, complete sequence Length = 180504 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 45 acaatctagtaagtaaatg 63 ||||||||||||||||||| Sbjct: 82192 acaatctagtaagtaaatg 82210
>gb|AC093284.3| Homo sapiens chromosome 5 clone RP11-436A5, complete sequence Length = 91874 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 aagtaaatggaggtgtata 73 ||||||||||||||||||| Sbjct: 74870 aagtaaatggaggtgtata 74852
>emb|BX284619.11| Zebrafish DNA sequence from clone DKEY-251E24 in linkage group 1, complete sequence Length = 196931 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 tgtatatttgttcagtatt 86 ||||||||||||||||||| Sbjct: 123703 tgtatatttgttcagtatt 123721
>gb|AC137794.2| Homo sapiens chromosome 5 clone RP11-434D11, complete sequence Length = 186972 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 55 aagtaaatggaggtgtata 73 ||||||||||||||||||| Sbjct: 97463 aagtaaatggaggtgtata 97445
>emb|CT485790.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 32279 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 41 tattacaatctagtaagta 59 ||||||||||||||||||| Sbjct: 1527 tattacaatctagtaagta 1509
>emb|CT485650.1| Leptosphaeria maculans : genomic region surrounding the avirulence gene AvrLm1 (AM084345) Length = 83129 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 41 tattacaatctagtaagta 59 ||||||||||||||||||| Sbjct: 16586 tattacaatctagtaagta 16604
>gb|AE003777.3| Drosophila melanogaster chromosome 3R, section 115 of 118 of the complete sequence Length = 232290 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 92 tgaattggatggtacacat 110 ||||||||||||||||||| Sbjct: 112762 tgaattggatggtacacat 112744
>dbj|AP002759.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-686G23, complete sequences Length = 177933 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 45 acaatctagtaagtaaatg 63 ||||||||||||||||||| Sbjct: 35102 acaatctagtaagtaaatg 35084
>emb|BX005212.7| Zebrafish DNA sequence from clone DKEY-221H2 in linkage group 1, complete sequence Length = 272535 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 tgtatatttgttcagtatt 86 ||||||||||||||||||| Sbjct: 141402 tgtatatttgttcagtatt 141420
>emb|CR456628.8| Zebrafish DNA sequence from clone CH211-157H7 in linkage group 1, complete sequence Length = 168101 Score = 38.2 bits (19), Expect = 5.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 69 gtatatttgttcagtattc 87 ||||||||||||||||||| Sbjct: 157784 gtatatttgttcagtattc 157766 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 689,985 Number of Sequences: 3902068 Number of extensions: 689985 Number of successful extensions: 46522 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46479 Number of HSP's gapped (non-prelim): 43 length of query: 123 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 102 effective length of database: 17,151,101,840 effective search space: 1749412387680 effective search space used: 1749412387680 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)