ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal39o24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064349.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
2gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome... 86 1e-13
3gb|AC137624.2| Oryza sativa (japonica cultivar-group) chromosome... 86 1e-13
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
5ref|NM_196110.1| Oryza sativa (japonica cultivar-group) putative... 72 2e-09
6dbj|AK065000.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
7ref|NM_196116.1| Oryza sativa (japonica cultivar-group) putative... 68 3e-08
8gb|AC107314.1| Oryza sativa (japonica cultivar-group) cultivar N... 68 3e-08
9dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 68 3e-08
10dbj|AK122082.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
11gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 68 3e-08
12gb|AC113335.1| Genomic sequence for Oryza sativa (japonica culti... 60 7e-06
13dbj|AK060558.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
14gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 1.8
15dbj|AK062606.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
16ref|XM_483019.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.9
17emb|AL121987.34|HSBA536C5 Human DNA sequence from clone RP11-536... 40 6.9
18emb|BX294138.1| Pirellula sp. strain 1 complete genome; segment ... 40 6.9
19gb|AC025177.6| Homo sapiens chromosome 5 clone CTD-2131I18, comp... 40 6.9
20gb|AC140322.4| Mus musculus BAC clone RP23-413F14 from chromosom... 40 6.9
21dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
22dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
23dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
24gb|AY105162.1| Zea mays PCO100489 mRNA sequence 40 6.9
25gb|AY829101.1| Acanthocephalus lucii 28S ribosomal RNA gene, par... 40 6.9
26gb|L81683.1|HSL81683 Homo sapiens (subclone 1_d11 from P1 H54) D... 40 6.9 
>dbj|AK064349.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-A03, full
           insert sequence
          Length = 1837

 Score =  101 bits (51), Expect = 2e-18
 Identities = 138/167 (82%)
 Strand = Plus / Plus

                                                                       
Query: 332 gagtaccaaatctgcaacggatatgggacggcaaaggccacgccaattctcaagaatcac 391
           |||||||| || ||||| || ||||| || || ||||| || ||||| |||| |||||| 
Sbjct: 699 gagtaccagatttgcaatggctatggtacagccaaggctacaccaatactcaggaatcat 758

                                                                       
Query: 392 tggagcacatatatagtggaagatgactttaggttcatctccgaaaacgggctgacagca 451
           ||||||||||| ||||| ||||| ||||| | ||||||||| | || |||| | ||||||
Sbjct: 759 tggagcacatacatagtcgaagacgacttcaagttcatctcagcaagcgggttaacagca 818

                                                          
Query: 452 gtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
           ||| | || ||||| ||||||||||||||||| || |||| ||||||
Sbjct: 819 gtgcgaattccagttggatggtggattgcgagtgatcccaatcctcc 865



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 28  ggagaccttcaagctatggcggatcaacgagacgaccttcaa 69
           ||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 380 ggagaccttcaagctgtggcggatcaacgagacgacgttcaa 421
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>gb|AC119290.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBa0037H06, complete sequence
          Length = 144457

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 97/115 (84%)
 Strand = Plus / Minus

                                                                        
Query: 384  agaatcactggagcacatatatagtggaagatgactttaggttcatctccgaaaacgggc 443
            ||||||| ||||||||||| ||||| ||||| ||||| | ||||||||| | || |||| 
Sbjct: 3612 agaatcattggagcacatacatagtcgaagacgacttcaagttcatctcagcaagcgggt 3553

                                                                   
Query: 444  tgacagcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
            | ||||||||| | || ||||| ||||||||||||||||| || |||| ||||||
Sbjct: 3552 taacagcagtgcgaattccagttggatggtggattgcgagtgatcccaatcctcc 3498



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 39   agctatggcggatcaacgagacgaccttcaa 69
            |||| |||||||||||||||||||| |||||
Sbjct: 5828 agctgtggcggatcaacgagacgacgttcaa 5798



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                
Query: 192  tgcggattatggcggcaaacgggctcttcttgcagg 227
            ||||||||| |||| |||| |||| |||||||||||
Sbjct: 5666 tgcggattagggcgccaaatgggcacttcttgcagg 5631
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>gb|AC137624.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0680F01,
             complete sequence
          Length = 156691

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 97/115 (84%)
 Strand = Plus / Minus

                                                                         
Query: 384   agaatcactggagcacatatatagtggaagatgactttaggttcatctccgaaaacgggc 443
             ||||||| ||||||||||| ||||| ||||| ||||| | ||||||||| | || |||| 
Sbjct: 79593 agaatcattggagcacatacatagtcgaagacgacttcaagttcatctcagcaagcgggt 79534

                                                                    
Query: 444   tgacagcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
             | ||||||||| | || ||||| ||||||||||||||||| || |||| ||||||
Sbjct: 79533 taacagcagtgcgaattccagttggatggtggattgcgagtgatcccaatcctcc 79479



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 39    agctatggcggatcaacgagacgaccttcaa 69
             |||| |||||||||||||||||||| |||||
Sbjct: 81809 agctgtggcggatcaacgagacgacgttcaa 81779



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 192   tgcggattatggcggcaaacgggctcttcttgcagg 227
             ||||||||| |||| |||| |||| |||||||||||
Sbjct: 81647 tgcggattagggcgccaaatgggcacttcttgcagg 81612
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 97/115 (84%)
 Strand = Plus / Minus

                                                                           
Query: 384     agaatcactggagcacatatatagtggaagatgactttaggttcatctccgaaaacgggc 443
               ||||||| ||||||||||| ||||| ||||| ||||| | ||||||||| | || |||| 
Sbjct: 8671170 agaatcattggagcacatacatagtcgaagacgacttcaagttcatctcagcaagcgggt 8671111

                                                                      
Query: 444     tgacagcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
               | ||||||||| | || ||||| ||||||||||||||||| || |||| ||||||
Sbjct: 8671110 taacagcagtgcgaattccagttggatggtggattgcgagtgatcccaatcctcc 8671056



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 39      agctatggcggatcaacgagacgaccttcaa 69
               |||| |||||||||||||||||||| |||||
Sbjct: 8673386 agctgtggcggatcaacgagacgacgttcaa 8673356



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 192     tgcggattatggcggcaaacgggctcttcttgcagg 227
               ||||||||| |||| |||| |||| |||||||||||
Sbjct: 8673224 tgcggattagggcgccaaatgggcacttcttgcagg 8673189
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>ref|NM_196110.1| Oryza sativa (japonica cultivar-group) putative Glucan
           1,3-beta-glucosidase precursor (OJ1003C07.1), mRNA
          Length = 1533

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 141/176 (80%)
 Strand = Plus / Plus

                                                                       
Query: 323 ctacaaggggagtaccaaatctgcaacggatatgggacggcaaaggccacgccaattctc 382
           |||||||||||||||||||| ||||| |||||||| |  ||||||||||| | | | |||
Sbjct: 607 ctacaaggggagtaccaaatatgcaatggatatggtaaagcaaaggccacacaagtgctc 666

                                                                       
Query: 383 aagaatcactggagcacatatatagtggaagatgactttaggttcatctccgaaaacggg 442
           | | | |||||| ||||||| ||||| ||    ||||| | |||||| ||   ||  |||
Sbjct: 667 agggaacactggcgcacatacatagttgagagcgacttcaagttcatatcaacaagtggg 726

                                                                   
Query: 443 ctgacagcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
           || |  |||||||| || ||||| |||||||||||||| |||||||||| ||||||
Sbjct: 727 ctaaacgcagtgagaattccagttggatggtggattgctagcgaccccaatcctcc 782



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 26  tgggagaccttcaagctatggcggatcaacgag 58
           ||||||||||||||||| ||| ||||| |||||
Sbjct: 307 tgggagaccttcaagctgtggaggatcgacgag 339
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>dbj|AK065000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E03, full
           insert sequence
          Length = 1817

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 141/176 (80%)
 Strand = Plus / Plus

                                                                       
Query: 323 ctacaaggggagtaccaaatctgcaacggatatgggacggcaaaggccacgccaattctc 382
           |||||||||||||||||||| ||||| |||||||| |  ||||||||||| | | | |||
Sbjct: 644 ctacaaggggagtaccaaatatgcaatggatatggtaaagcaaaggccacacaagtgctc 703

                                                                       
Query: 383 aagaatcactggagcacatatatagtggaagatgactttaggttcatctccgaaaacggg 442
           | | | |||||| ||||||| ||||| ||    ||||| | |||||| ||   ||  |||
Sbjct: 704 agggaacactggcgcacatacatagttgagagcgacttcaagttcatatcaacaagtggg 763

                                                                   
Query: 443 ctgacagcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
           || |  |||||||| || ||||| |||||||||||||| |||||||||| ||||||
Sbjct: 764 ctaaacgcagtgagaattccagttggatggtggattgctagcgaccccaatcctcc 819



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 26  tgggagaccttcaagctatggcggatcaacgag 58
           ||||||||||||||||| ||| ||||| |||||
Sbjct: 344 tgggagaccttcaagctgtggaggatcgacgag 376
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>ref|NM_196116.1| Oryza sativa (japonica cultivar-group) putative Glucan
            1,3-beta-glucosidase precursor (OJ1208D02.11), mRNA
          Length = 4350

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 97/118 (82%)
 Strand = Plus / Plus

                                                                        
Query: 389  cactggagcacatatatagtggaagatgactttaggttcatctccgaaaacgggctgaca 448
            ||||||| ||||| |||||| || |||||||| |  ||||||||   ||| ||||| |  
Sbjct: 2044 cactggaacacatttatagttgaggatgacttcaaattcatctcatcaaatgggctaaat 2103

                                                                      
Query: 449  gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctccagcacctt 506
            ||||||||||| ||||| ||||||||||| || ||||||||||  ||||| |||||||
Sbjct: 2104 gcagtgaggatcccagttggatggtggatcgccagcgaccccaaccctcctgcacctt 2161



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 17   gcgtctggctgggagaccttcaagctatggcggatcaacgagacgaccttcaat 70
            |||||||| |||||||||||||| || ||| ||||||||||||| || ||||||
Sbjct: 1669 gcgtctggttgggagaccttcaaactgtggaggatcaacgagactacattcaat 1722



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 449  gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
            |||||||| || ||||| ||||||||||| || || ||||||| ||||||
Sbjct: 3544 gcagtgagaatcccagttggatggtggatcgccagtgaccccaatcctcc 3593
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>gb|AC107314.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone
             OJ1208D02 from chromosome 10, complete sequence
          Length = 120132

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                         
Query: 389   cactggagcacatatatagtggaagatgactttaggttcatctccgaaaacgggctgaca 448
             ||||||| ||||| |||||| || |||||||| |  ||||||||   ||| ||||| |  
Sbjct: 56920 cactggaacacatttatagttgaggatgacttcaaattcatctcatcaaatgggctaaat 56861

                                                                       
Query: 449   gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctccagcacctt 506
             ||||||||||| ||||| ||||||||||| || ||||||||||  ||||| |||||||
Sbjct: 56860 gcagtgaggatcccagttggatggtggatcgccagcgaccccaaccctcctgcacctt 56803



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 17    gcgtctggctgggagaccttcaagctatggcggatcaacgagacgaccttcaat 70
             |||||||| |||||||||||||| || ||| ||||||||||||| || ||||||
Sbjct: 59034 gcgtctggttgggagaccttcaaactgtggaggatcaacgagactacattcaat 58981



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                               
Query: 323   ctacaaggggagtaccaaatctgcaacggatatgggacggcaaaggccac 372
             |||||||||||||||||||| ||||| |||||||| |  |||||||||||
Sbjct: 23613 ctacaaggggagtaccaaatatgcaatggatatggtaaagcaaaggccac 23564



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                               
Query: 449   gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
             |||||||| || ||||| |||||||||||||| |||||||||| ||||||
Sbjct: 21731 gcagtgagaattccagttggatggtggattgctagcgaccccaatcctcc 21682



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 449   gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
             |||||||| || ||||| ||||||||||| || || ||||||| ||||||
Sbjct: 53051 gcagtgagaatcccagttggatggtggatcgccagtgaccccaatcctcc 53002



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 26    tgggagaccttcaagctatggcggatcaacgag 58
             ||||||||||||||||| ||| ||||| |||||
Sbjct: 25462 tgggagaccttcaagctgtggaggatcgacgag 25430
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                            
Query: 389      cactggagcacatatatagtggaagatgactttaggttcatctccgaaaacgggctgaca 448
                ||||||| ||||| |||||| || |||||||| |  ||||||||   ||| ||||| |  
Sbjct: 11188800 cactggaacacatttatagttgaggatgacttcaaattcatctcatcaaatgggctaaat 11188741

                                                                          
Query: 449      gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctccagcacctt 506
                ||||||||||| ||||| ||||||||||| || ||||||||||  ||||| |||||||
Sbjct: 11188740 gcagtgaggatcccagttggatggtggatcgccagcgaccccaaccctcctgcacctt 11188683



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                      
Query: 17       gcgtctggctgggagaccttcaagctatggcggatcaacgagacgaccttcaat 70
                |||||||| |||||||||||||| || ||| ||||||||||||| || ||||||
Sbjct: 11190914 gcgtctggttgggagaccttcaaactgtggaggatcaacgagactacattcaat 11190861



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 323      ctacaaggggagtaccaaatctgcaacggatatgggacggcaaaggccac 372
                |||||||||||||||||||| ||||| |||||||| |  |||||||||||
Sbjct: 11155493 ctacaaggggagtaccaaatatgcaatggatatggtaaagcaaaggccac 11155444



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 449      gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
                |||||||| || ||||| |||||||||||||| |||||||||| ||||||
Sbjct: 11153611 gcagtgagaattccagttggatggtggattgctagcgaccccaatcctcc 11153562



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                  
Query: 449      gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
                |||||||| || ||||| ||||||||||| || || ||||||| ||||||
Sbjct: 11184931 gcagtgagaatcccagttggatggtggatcgccagtgaccccaatcctcc 11184882



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 26       tgggagaccttcaagctatggcggatcaacgag 58
                ||||||||||||||||| ||| ||||| |||||
Sbjct: 11157342 tgggagaccttcaagctgtggaggatcgacgag 11157310
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>dbj|AK122082.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121I23, full
            insert sequence
          Length = 4705

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 97/118 (82%)
 Strand = Plus / Plus

                                                                        
Query: 389  cactggagcacatatatagtggaagatgactttaggttcatctccgaaaacgggctgaca 448
            ||||||| ||||| |||||| || |||||||| |  ||||||||   ||| ||||| |  
Sbjct: 2121 cactggaacacatttatagttgaggatgacttcaaattcatctcatcaaatgggctaaat 2180

                                                                      
Query: 449  gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctccagcacctt 506
            ||||||||||| ||||| ||||||||||| || ||||||||||  ||||| |||||||
Sbjct: 2181 gcagtgaggatcccagttggatggtggatcgccagcgaccccaaccctcctgcacctt 2238



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 17   gcgtctggctgggagaccttcaagctatggcggatcaacgagacgaccttcaat 70
            |||||||| |||||||||||||| || ||| ||||||||||||| || ||||||
Sbjct: 1746 gcgtctggttgggagaccttcaaactgtggaggatcaacgagactacattcaat 1799



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 449  gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
            |||||||| || ||||| ||||||||||| || || ||||||| ||||||
Sbjct: 3621 gcagtgagaatcccagttggatggtggatcgccagtgaccccaatcctcc 3670
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 97/118 (82%)
 Strand = Plus / Minus

                                                                            
Query: 389      cactggagcacatatatagtggaagatgactttaggttcatctccgaaaacgggctgaca 448
                ||||||| ||||| |||||| || |||||||| |  ||||||||   ||| ||||| |  
Sbjct: 11195240 cactggaacacatttatagttgaggatgacttcaaattcatctcatcaaatgggctaaat 11195181

                                                                          
Query: 449      gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctccagcacctt 506
                ||||||||||| ||||| ||||||||||| || ||||||||||  ||||| |||||||
Sbjct: 11195180 gcagtgaggatcccagttggatggtggatcgccagcgaccccaaccctcctgcacctt 11195123



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                      
Query: 17       gcgtctggctgggagaccttcaagctatggcggatcaacgagacgaccttcaat 70
                |||||||| |||||||||||||| || ||| ||||||||||||| || ||||||
Sbjct: 11197354 gcgtctggttgggagaccttcaaactgtggaggatcaacgagactacattcaat 11197301



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 323      ctacaaggggagtaccaaatctgcaacggatatgggacggcaaaggccac 372
                |||||||||||||||||||| ||||| |||||||| |  |||||||||||
Sbjct: 11161933 ctacaaggggagtaccaaatatgcaatggatatggtaaagcaaaggccac 11161884



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 449      gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
                |||||||| || ||||| |||||||||||||| |||||||||| ||||||
Sbjct: 11160051 gcagtgagaattccagttggatggtggattgctagcgaccccaatcctcc 11160002



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                  
Query: 449      gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
                |||||||| || ||||| ||||||||||| || || ||||||| ||||||
Sbjct: 11191371 gcagtgagaatcccagttggatggtggatcgccagtgaccccaatcctcc 11191322



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 26       tgggagaccttcaagctatggcggatcaacgag 58
                ||||||||||||||||| ||| ||||| |||||
Sbjct: 11163782 tgggagaccttcaagctgtggaggatcgacgag 11163750
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>gb|AC113335.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
            Nipponbare clone OJ1003C07, from chromosome 10, complete
            sequence
          Length = 115188

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                              
Query: 449  gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
            |||||||| || ||||| |||||||||||||| |||||||||| ||||||
Sbjct: 5446 gcagtgagaattccagttggatggtggattgctagcgaccccaatcctcc 5495



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                              
Query: 323  ctacaaggggagtaccaaatctgcaacggatatgggacggcaaaggccac 372
            |||||||||||||||||||| ||||| |||||||| |  |||||||||||
Sbjct: 3564 ctacaaggggagtaccaaatatgcaatggatatggtaaagcaaaggccac 3613



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 26   tgggagaccttcaagctatggcggatcaacgag 58
            ||||||||||||||||| ||| ||||| |||||
Sbjct: 1715 tgggagaccttcaagctgtggaggatcgacgag 1747
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>dbj|AK060558.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-E05, full
            insert sequence
          Length = 2283

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 449  gcagtgaggataccagtgggatggtggattgcgagcgaccccagtcctcc 498
            |||||||| || ||||| ||||||||||| || || ||||||| ||||||
Sbjct: 1199 gcagtgagaatcccagttggatggtggatcgccagtgaccccaatcctcc 1248
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 121     ggtggccacggcgacgtcgccggga 145
               |||||||||||||||| ||||||||
Sbjct: 3690325 ggtggccacggcgacggcgccggga 3690301
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>dbj|AK062606.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-A03, full
           insert sequence
          Length = 577

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 26  tgggagaccttcaagctatggcggatcaacgag 58
           ||||||||||||||||| ||| ||||| |||||
Sbjct: 177 tgggagaccttcaagctgtggaggatcgacgag 145
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>ref|XM_483019.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1599

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 449 gcagtgaggataccagtgggatggtggattgc 480
           ||||| ||||| ||||| ||||||||||||||
Sbjct: 703 gcagttaggattccagttggatggtggattgc 734
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>emb|AL121987.34|HSBA536C5 Human DNA sequence from clone RP11-536C5 on chromosome 1q23.1-24.1
              Contains the 5' end of the KCNJ10 gene for potassium
              inwardly-rectifying channel subfamily J member 10, a novel
              gene, the KCNJ9 gene for potassium inwardly-rectifying
              channel subfamily J member 9, the IGSF8 gene for
              immunoglobulin superfamily member 8, the ATP1A2 gene for
              Na+/K+ transporting ATPase alpha 2 (+) polypeptide, the
              ATP1A4 gene for Na+/K+ transporting ATPase alpha 4 (+)
              polypeptide, the CASQ1 gene for calsequestrin 1
              (fast-twitch, skeletal muscle), a novel gene, the PEA15
              gene for phosphoprotein enriched in astrocytes 15 and four
              CpG islands, complete sequence
          Length = 170834

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 263    aagagcacaagatggggcaa 282
              ||||||||||||||||||||
Sbjct: 170083 aagagcacaagatggggcaa 170064
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>emb|BX294138.1| Pirellula sp. strain 1 complete genome; segment 6/24
          Length = 321950

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 358    gacggcaaaggccacgccaa 377
              ||||||||||||||||||||
Sbjct: 206290 gacggcaaaggccacgccaa 206271
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>gb|AC025177.6| Homo sapiens chromosome 5 clone CTD-2131I18, complete sequence
          Length = 112967

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    ggcgtctggctgggagacct 35
             ||||||||||||||||||||
Sbjct: 35093 ggcgtctggctgggagacct 35112
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>gb|AC140322.4| Mus musculus BAC clone RP23-413F14 from chromosome 14, complete sequence
          Length = 205679

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 106    gagcgacggctcggtggtggccac 129
              |||| |||||||||||||||||||
Sbjct: 102436 gagctacggctcggtggtggccac 102413
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 449      gcagtgaggataccagtgggatggtggattgc 480
                ||||| ||||| ||||| ||||||||||||||
Sbjct: 23907814 gcagttaggattccagttggatggtggattgc 23907845
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>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1111_H02
          Length = 108603

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 449   gcagtgaggataccagtgggatggtggattgc 480
             ||||| ||||| ||||| ||||||||||||||
Sbjct: 99518 gcagttaggattccagttggatggtggattgc 99549
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>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0419H09
          Length = 143533

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 449   gcagtgaggataccagtgggatggtggattgc 480
             ||||| ||||| ||||| ||||||||||||||
Sbjct: 40965 gcagttaggattccagttggatggtggattgc 40996
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>gb|AY105162.1| Zea mays PCO100489 mRNA sequence
          Length = 737

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 93  tcgtcggcgtccagagcgac 112
           ||||||||||||||||||||
Sbjct: 274 tcgtcggcgtccagagcgac 255
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>gb|AY829101.1| Acanthocephalus lucii 28S ribosomal RNA gene, partial sequence
          Length = 2716

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 187  caggatgcggattatggcgg 206
            ||||||||||||||||||||
Sbjct: 1423 caggatgcggattatggcgg 1442
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>gb|L81683.1|HSL81683 Homo sapiens (subclone 1_d11 from P1 H54) DNA sequence, complete
            sequence
          Length = 2835

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   ggcgtctggctgggagacct 35
            ||||||||||||||||||||
Sbjct: 2014 ggcgtctggctgggagacct 1995


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,985,425
Number of Sequences: 3902068
Number of extensions: 2985425
Number of successful extensions: 49578
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49378
Number of HSP's gapped (non-prelim): 200
length of query: 512
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 489
effective length of database: 17,143,297,704
effective search space: 8383072577256
effective search space used: 8383072577256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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