| Clone Name | baal39o16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK101553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033049N14, full insert sequence Length = 1780 Score = 684 bits (345), Expect = 0.0 Identities = 588/669 (87%) Strand = Plus / Plus Query: 9 tactcagcaatgtcaccttcgccgatagctgcagctagtttaggtcaagtttacaaggca 68 |||||| |||| |||||||| || || ||||| || ||||||||||||||||| |||||| Sbjct: 97 tactcaacaatatcaccttccccaattgctgctgcaagtttaggtcaagtttataaggca 156 Query: 69 cggttgaaatactccgagcagctggtagctgtcaaggtgcaaagacctggcatcgaggat 128 ||||| |||||||| | ||| ||||||||||||||||||||||| ||||| || |||||| Sbjct: 157 cggttaaaatactctgggcaactggtagctgtcaaggtgcaaaggcctggtattgaggat 216 Query: 129 gccataggccgtgatttttacctactgaggggacttggttttctaataaataagtatgtc 188 ||||| | ||||||||| ||||||||||| ||||| | |||||||||||| |||||| Sbjct: 217 attatagggcttgatttttatctactgaggggccttggatatctaataaataaatatgtc 276 Query: 189 gacattataactactgatgctgttgctctgatagatgaatttgcccgaagagttttccaa 248 ||| ||||| | | ||||| ||||||||| || | ||||||||| |||||||||| |||| Sbjct: 277 gactttatatccagtgatgttgttgctctcatgggtgaatttgctcgaagagtttaccaa 336 Query: 249 gagcttaattatgtccaggaaggccaaaacgcacgaaggtttaaaaagttatatgctgac 308 ||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||| Sbjct: 337 gagcttaattatgtccaggaaggccaaaatgcaagaaggtttaagaagttatatgctgac 396 Query: 309 aagcaagacatattggtccctgatatattttgggattacacaagtgcaaaggtactgaca 368 |||||||| | |||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 397 aagcaagatgtgctggtccctgatatattttgggactacacaagtgcaaaggttctgaca 456 Query: 369 atggaatggattgagggtgtaaaacttaatcaacaagctgccattgaaggccaaggcttg 428 ||||| ||||||||||||||| | | || || ||||| || |||||| ||||| ||| Sbjct: 457 atggagtggattgagggtgtagagttaaaccagcaagcagctattgaaaaacaaggtttg 516 Query: 429 aaggtcttggacttggtgaacattggtatccagtgtagcctaaggcagctactagagtat 488 ||||| |||| ||||||||||||||||| ||||| ||| ||||||| ||| | ||||| Sbjct: 517 aaggttctggatttggtgaacattggtattcagtgcagcttaaggcaactattggagtac 576 Query: 489 ggttactttcatgctgacccgcatcctggtaatattttggcaacacctgaagggaagctt 548 ||||||||||||||||| || ||||||||||| || |||||||||||||||||||||||| Sbjct: 577 ggttactttcatgctgatcctcatcctggtaacatattggcaacacctgaagggaagctt 636 Query: 549 gcttttcttgattttggcatgatgagtgaaaccccagaggatgcaagggtagccatcata 608 || |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||| Sbjct: 637 gcctttcttgattttggtatgatgagtgagaccccagaggatgcaagagtagccatcata 696 Query: 609 gggcatgtcgttcacatggtcaatcgggattatgaagcgatggctcgtgattattatgca 668 || ||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 697 ggccatgttgttcacatggtcaatagggactatgaagcgatggctcgtgattattatgct 756 Query: 669 cttgatttt 677 || |||||| Sbjct: 757 ctcgatttt 765
>gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0018A03, complete sequence Length = 146278 Score = 464 bits (234), Expect = e-127 Identities = 369/414 (89%) Strand = Plus / Plus Query: 264 caggaaggccaaaacgcacgaaggtttaaaaagttatatgctgacaagcaagacatattg 323 |||||||||||||| ||| |||||||||| ||||||||||||||||||||||| | || Sbjct: 60484 caggaaggccaaaatgcaagaaggtttaagaagttatatgctgacaagcaagatgtgctg 60543 Query: 324 gtccctgatatattttgggattacacaagtgcaaaggtactgacaatggaatggattgag 383 |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 60544 gtccctgatatattttgggactacacaagtgcaaaggttctgacaatggagtggattgag 60603 Query: 384 ggtgtaaaacttaatcaacaagctgccattgaaggccaaggcttgaaggtcttggacttg 443 |||||||| | || || ||||| || |||||| ||||| |||||||| |||| ||| Sbjct: 60604 ggtgtaaagttaaaccagcaagcagctattgaaaaacaaggtttgaaggttctggatttg 60663 Query: 444 gtgaacattggtatccagtgtagcctaaggcagctactagagtatggttactttcatgct 503 |||||||||||||| ||||| ||| ||||||| ||| | ||||| ||||||||||||||| Sbjct: 60664 gtgaacattggtattcagtgcagcttaaggcaactattggagtacggttactttcatgct 60723 Query: 504 gacccgcatcctggtaatattttggcaacacctgaagggaagcttgcttttcttgatttt 563 || || ||||||||||| || |||||||||||||||||||||||||| |||||||||||| Sbjct: 60724 gatcctcatcctggtaacatattggcaacacctgaagggaagcttgcctttcttgatttt 60783 Query: 564 ggcatgatgagtgaaaccccagaggatgcaagggtagccatcatagggcatgtcgttcac 623 || ||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 60784 ggtatgatgagtgagaccccagaggatgcaagagtagccatcataggccatgttgttcac 60843 Query: 624 atggtcaatcgggattatgaagcgatggctcgtgattattatgcacttgatttt 677 ||||||||| |||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 60844 atggtcaatagggactatgaagcgatggctcgtgattattatgctctcgatttt 60897 Score = 244 bits (123), Expect = 3e-61 Identities = 225/259 (86%) Strand = Plus / Plus Query: 9 tactcagcaatgtcaccttcgccgatagctgcagctagtttaggtcaagtttacaaggca 68 |||||| |||| |||||||| || || ||||| || ||||||||||||||||| |||||| Sbjct: 59514 tactcaacaatatcaccttccccaattgctgctgcaagtttaggtcaagtttataaggca 59573 Query: 69 cggttgaaatactccgagcagctggtagctgtcaaggtgcaaagacctggcatcgaggat 128 ||||| |||||||| | ||| ||||||||||||||||||||||| ||||| || |||||| Sbjct: 59574 cggttaaaatactctgggcaactggtagctgtcaaggtgcaaaggcctggtattgaggat 59633 Query: 129 gccataggccgtgatttttacctactgaggggacttggttttctaataaataagtatgtc 188 ||||| | ||||||||| ||||||||||| ||||| | |||||||||||| |||||| Sbjct: 59634 attatagggcttgatttttatctactgaggggccttggatatctaataaataaatatgtc 59693 Query: 189 gacattataactactgatgctgttgctctgatagatgaatttgcccgaagagttttccaa 248 ||| ||||| | | ||||| ||||||||| || ||||||||||| |||||||||| |||| Sbjct: 59694 gactttatatccagtgatgttgttgctctcatggatgaatttgctcgaagagtttaccaa 59753 Query: 249 gagcttaattatgtccagg 267 ||||||||||||||||||| Sbjct: 59754 gagcttaattatgtccagg 59772
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 464 bits (234), Expect = e-127 Identities = 369/414 (89%) Strand = Plus / Plus Query: 264 caggaaggccaaaacgcacgaaggtttaaaaagttatatgctgacaagcaagacatattg 323 |||||||||||||| ||| |||||||||| ||||||||||||||||||||||| | || Sbjct: 14909568 caggaaggccaaaatgcaagaaggtttaagaagttatatgctgacaagcaagatgtgctg 14909627 Query: 324 gtccctgatatattttgggattacacaagtgcaaaggtactgacaatggaatggattgag 383 |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| Sbjct: 14909628 gtccctgatatattttgggactacacaagtgcaaaggttctgacaatggagtggattgag 14909687 Query: 384 ggtgtaaaacttaatcaacaagctgccattgaaggccaaggcttgaaggtcttggacttg 443 |||||||| | || || ||||| || |||||| ||||| |||||||| |||| ||| Sbjct: 14909688 ggtgtaaagttaaaccagcaagcagctattgaaaaacaaggtttgaaggttctggatttg 14909747 Query: 444 gtgaacattggtatccagtgtagcctaaggcagctactagagtatggttactttcatgct 503 |||||||||||||| ||||| ||| ||||||| ||| | ||||| ||||||||||||||| Sbjct: 14909748 gtgaacattggtattcagtgcagcttaaggcaactattggagtacggttactttcatgct 14909807 Query: 504 gacccgcatcctggtaatattttggcaacacctgaagggaagcttgcttttcttgatttt 563 || || ||||||||||| || |||||||||||||||||||||||||| |||||||||||| Sbjct: 14909808 gatcctcatcctggtaacatattggcaacacctgaagggaagcttgcctttcttgatttt 14909867 Query: 564 ggcatgatgagtgaaaccccagaggatgcaagggtagccatcatagggcatgtcgttcac 623 || ||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||||| Sbjct: 14909868 ggtatgatgagtgagaccccagaggatgcaagagtagccatcataggccatgttgttcac 14909927 Query: 624 atggtcaatcgggattatgaagcgatggctcgtgattattatgcacttgatttt 677 ||||||||| |||| ||||||||||||||||||||||||||||| || |||||| Sbjct: 14909928 atggtcaatagggactatgaagcgatggctcgtgattattatgctctcgatttt 14909981 Score = 244 bits (123), Expect = 3e-61 Identities = 225/259 (86%) Strand = Plus / Plus Query: 9 tactcagcaatgtcaccttcgccgatagctgcagctagtttaggtcaagtttacaaggca 68 |||||| |||| |||||||| || || ||||| || ||||||||||||||||| |||||| Sbjct: 14908598 tactcaacaatatcaccttccccaattgctgctgcaagtttaggtcaagtttataaggca 14908657 Query: 69 cggttgaaatactccgagcagctggtagctgtcaaggtgcaaagacctggcatcgaggat 128 ||||| |||||||| | ||| ||||||||||||||||||||||| ||||| || |||||| Sbjct: 14908658 cggttaaaatactctgggcaactggtagctgtcaaggtgcaaaggcctggtattgaggat 14908717 Query: 129 gccataggccgtgatttttacctactgaggggacttggttttctaataaataagtatgtc 188 ||||| | ||||||||| ||||||||||| ||||| | |||||||||||| |||||| Sbjct: 14908718 attatagggcttgatttttatctactgaggggccttggatatctaataaataaatatgtc 14908777 Query: 189 gacattataactactgatgctgttgctctgatagatgaatttgcccgaagagttttccaa 248 ||| ||||| | | ||||| ||||||||| || ||||||||||| |||||||||| |||| Sbjct: 14908778 gactttatatccagtgatgttgttgctctcatggatgaatttgctcgaagagtttaccaa 14908837 Query: 249 gagcttaattatgtccagg 267 ||||||||||||||||||| Sbjct: 14908838 gagcttaattatgtccagg 14908856
>dbj|AK059093.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-C02, full insert sequence Length = 1302 Score = 424 bits (214), Expect = e-115 Identities = 340/382 (89%) Strand = Plus / Plus Query: 296 gttatatgctgacaagcaagacatattggtccctgatatattttgggattacacaagtgc 355 ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||| Sbjct: 1 gttatatgctgacaagcaagatgtgctggtccctgatatattttgggactacacaagtgc 60 Query: 356 aaaggtactgacaatggaatggattgagggtgtaaaacttaatcaacaagctgccattga 415 |||||| ||||||||||| ||||||||||||||||| | || || ||||| || ||||| Sbjct: 61 aaaggttctgacaatggagtggattgagggtgtaaagttaaaccagcaagcagctattga 120 Query: 416 aggccaaggcttgaaggtcttggacttggtgaacattggtatccagtgtagcctaaggca 475 | ||||| |||||||| |||| ||||||||||||||||| ||||| ||| ||||||| Sbjct: 121 aaaacaaggtttgaaggttctggatttggtgaacattggtattcagtgcagcttaaggca 180 Query: 476 gctactagagtatggttactttcatgctgacccgcatcctggtaatattttggcaacacc 535 ||| | ||||| ||||||||||||||||| || ||||||||||| || ||||||||||| Sbjct: 181 actattggagtacggttactttcatgctgatcctcatcctggtaacatattggcaacacc 240 Query: 536 tgaagggaagcttgcttttcttgattttggcatgatgagtgaaaccccagaggatgcaag 595 ||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 241 tgaagggaagcttgcctttcttgattttggtatgatgagtgagaccccagaggatgcaag 300 Query: 596 ggtagccatcatagggcatgtcgttcacatggtcaatcgggattatgaagcgatggctcg 655 |||||||||||||| ||||| ||||||||||||||| |||| ||||||||||||||||| Sbjct: 301 agtagccatcataggccatgttgttcacatggtcaatagggactatgaagcgatggctcg 360 Query: 656 tgattattatgcacttgatttt 677 |||||||||||| || |||||| Sbjct: 361 tgattattatgctctcgatttt 382
>gb|BT012844.1| Lycopersicon esculentum clone 113914R, mRNA sequence Length = 2307 Score = 186 bits (94), Expect = 6e-44 Identities = 169/194 (87%) Strand = Plus / Plus Query: 474 cagctactagagtatggttactttcatgctgacccgcatcctggtaatattttggcaaca 533 ||||| || ||||||||||| ||||||||||| || |||||||| || ||||||| ||| Sbjct: 1185 cagctgcttgagtatggttattttcatgctgatcctcatcctgggaaccttttggcgaca 1244 Query: 534 cctgaagggaagcttgcttttcttgattttggcatgatgagtgaaaccccagaggatgca 593 ||||| |||||||||||||||||||||||||| |||||||||||||| || || || ||| Sbjct: 1245 cctgaggggaagcttgcttttcttgattttgggatgatgagtgaaactcctgaagaagca 1304 Query: 594 agggtagccatcatagggcatgtcgttcacatggtcaatcgggattatgaagcgatggct 653 || | || || || || ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1305 agatttgctattattggtcatgttgttcacatggtcaatcgggattatgaagcgatggct 1364 Query: 654 cgtgattattatgc 667 ||||| || ||||| Sbjct: 1365 cgtgactactatgc 1378 Score = 67.9 bits (34), Expect = 4e-08 Identities = 85/102 (83%) Strand = Plus / Plus Query: 209 tgttgctctgatagatgaatttgcccgaagagttttccaagagcttaattatgtccagga 268 ||||||||| || ||||||||||| || ||||||| |||||||| || ||||| ||||| Sbjct: 920 tgttgctcttattgatgaatttgctcgcagagtttatcaagagctcaactatgtacagga 979 Query: 269 aggccaaaacgcacgaaggtttaaaaagttatatgctgacaa 310 ||| || || ||| | || ||||||||||| || |||||||| Sbjct: 980 agggcagaatgcaaggagatttaaaaagttgtacgctgacaa 1021
>ref|NM_106608.2| Arabidopsis thaliana unknown protein AT1G79600 mRNA, complete cds Length = 2469 Score = 121 bits (61), Expect = 3e-24 Identities = 271/341 (79%) Strand = Plus / Plus Query: 327 cctgatatattttgggattacacaagtgcaaaggtactgacaatggaatggattgagggt 386 ||||||||||| ||||||||||| || ||||| || |||||||||||| ||||||| Sbjct: 1132 cctgatatattctgggattacacgagccgcaaggtgctaacaatggaatgggttgaggga 1191 Query: 387 gtaaaacttaatcaacaagctgccattgaaggccaaggcttgaaggtcttggacttggtg 446 ||||| ||| | ||| ||||||||| | || || |||||||| |||| | ||| Sbjct: 1192 actaaactgaatgagcaacttgccattgagagtcagggattgaaggttctggatctcgtg 1251 Query: 447 aacattggtatccagtgtagcctaaggcagctactagagtatggttactttcatgctgac 506 || | || |||||||||||||||||||| || | |||||||| | || ||||||||| Sbjct: 1252 aatacaggaatccagtgtagcctaaggcaactcttggagtatggctttttccatgctgac 1311 Query: 507 ccgcatcctggtaatattttggcaacacctgaagggaagcttgcttttcttgattttggc 566 || |||||||||||| | |||||||||||||| || || ||||| ||||| || |||||| Sbjct: 1312 cctcatcctggtaatctcttggcaacacctgatggaaaacttgcctttctagactttggc 1371 Query: 567 atgatgagtgaaaccccagaggatgcaagggtagccatcatagggcatgtcgttcacatg 626 ||||||||||| || |||||||| || || | || |||||||| ||||| || || | Sbjct: 1372 atgatgagtgagacaccagaggaagctagatttgctatcataggccatgttgtccattta 1431 Query: 627 gtcaatcgggattatgaagcgatggctcgtgattattatgc 667 || || || ||||||||||| ||||| || ||||| ||||| Sbjct: 1432 gtgaaccgagattatgaagccatggcacgagattactatgc 1472 Score = 40.1 bits (20), Expect = 9.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 96 gctgtcaaggtgcaaagacctggcatcgaggatgccataggccgtgatttttacct 151 |||||||| || ||| | ||||| ||||| || ||||| |||| |||||||||||| Sbjct: 901 gctgtcaaagttcaacgccctgggatcgaagaagccattggccttgatttttacct 956
>gb|AY141992.1| Arabidopsis thaliana At1g79600/F20B17_3 mRNA, complete cds Length = 2136 Score = 121 bits (61), Expect = 3e-24 Identities = 271/341 (79%) Strand = Plus / Plus Query: 327 cctgatatattttgggattacacaagtgcaaaggtactgacaatggaatggattgagggt 386 ||||||||||| ||||||||||| || ||||| || |||||||||||| ||||||| Sbjct: 958 cctgatatattctgggattacacgagccgcaaggtgctaacaatggaatgggttgaggga 1017 Query: 387 gtaaaacttaatcaacaagctgccattgaaggccaaggcttgaaggtcttggacttggtg 446 ||||| ||| | ||| ||||||||| | || || |||||||| |||| | ||| Sbjct: 1018 actaaactgaatgagcaacttgccattgagagtcagggattgaaggttctggatctcgtg 1077 Query: 447 aacattggtatccagtgtagcctaaggcagctactagagtatggttactttcatgctgac 506 || | || |||||||||||||||||||| || | |||||||| | || ||||||||| Sbjct: 1078 aatacaggaatccagtgtagcctaaggcaactcttggagtatggctttttccatgctgac 1137 Query: 507 ccgcatcctggtaatattttggcaacacctgaagggaagcttgcttttcttgattttggc 566 || |||||||||||| | |||||||||||||| || || ||||| ||||| || |||||| Sbjct: 1138 cctcatcctggtaatctcttggcaacacctgatggaaaacttgcctttctagactttggc 1197 Query: 567 atgatgagtgaaaccccagaggatgcaagggtagccatcatagggcatgtcgttcacatg 626 ||||||||||| || |||||||| || || | || |||||||| ||||| || || | Sbjct: 1198 atgatgagtgagacaccagaggaagctagatttgctatcataggccatgttgtccattta 1257 Query: 627 gtcaatcgggattatgaagcgatggctcgtgattattatgc 667 || || || ||||||||||| ||||| || ||||| ||||| Sbjct: 1258 gtgaaccgagattatgaagccatggcacgagattactatgc 1298 Score = 40.1 bits (20), Expect = 9.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 96 gctgtcaaggtgcaaagacctggcatcgaggatgccataggccgtgatttttacct 151 |||||||| || ||| | ||||| ||||| || ||||| |||| |||||||||||| Sbjct: 727 gctgtcaaagttcaacgccctgggatcgaagaagccattggccttgatttttacct 782
>gb|AY064971.1| Arabidopsis thaliana At1g79600/F20B17_3 mRNA, complete cds Length = 2400 Score = 121 bits (61), Expect = 3e-24 Identities = 271/341 (79%) Strand = Plus / Plus Query: 327 cctgatatattttgggattacacaagtgcaaaggtactgacaatggaatggattgagggt 386 ||||||||||| ||||||||||| || ||||| || |||||||||||| ||||||| Sbjct: 1119 cctgatatattctgggattacacgagccgcaaggtgctaacaatggaatgggttgaggga 1178 Query: 387 gtaaaacttaatcaacaagctgccattgaaggccaaggcttgaaggtcttggacttggtg 446 ||||| ||| | ||| ||||||||| | || || |||||||| |||| | ||| Sbjct: 1179 actaaactgaatgagcaacttgccattgagagtcagggattgaaggttctggatctcgtg 1238 Query: 447 aacattggtatccagtgtagcctaaggcagctactagagtatggttactttcatgctgac 506 || | || |||||||||||||||||||| || | |||||||| | || ||||||||| Sbjct: 1239 aatacaggaatccagtgtagcctaaggcaactcttggagtatggctttttccatgctgac 1298 Query: 507 ccgcatcctggtaatattttggcaacacctgaagggaagcttgcttttcttgattttggc 566 || |||||||||||| | |||||||||||||| || || ||||| ||||| || |||||| Sbjct: 1299 cctcatcctggtaatctcttggcaacacctgatggaaaacttgcctttctagactttggc 1358 Query: 567 atgatgagtgaaaccccagaggatgcaagggtagccatcatagggcatgtcgttcacatg 626 ||||||||||| || |||||||| || || | || |||||||| ||||| || || | Sbjct: 1359 atgatgagtgagacaccagaggaagctagatttgctatcataggccatgttgtccattta 1418 Query: 627 gtcaatcgggattatgaagcgatggctcgtgattattatgc 667 || || || ||||||||||| ||||| || ||||| ||||| Sbjct: 1419 gtgaaccgagattatgaagccatggcacgagattactatgc 1459 Score = 40.1 bits (20), Expect = 9.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 96 gctgtcaaggtgcaaagacctggcatcgaggatgccataggccgtgatttttacct 151 |||||||| || ||| | ||||| ||||| || ||||| |||| |||||||||||| Sbjct: 888 gctgtcaaagttcaacgccctgggatcgaagaagccattggccttgatttttacct 943
>gb|AY039869.1| Arabidopsis thaliana At1g79600/F20B17_3 mRNA, complete cds Length = 2445 Score = 121 bits (61), Expect = 3e-24 Identities = 271/341 (79%) Strand = Plus / Plus Query: 327 cctgatatattttgggattacacaagtgcaaaggtactgacaatggaatggattgagggt 386 ||||||||||| ||||||||||| || ||||| || |||||||||||| ||||||| Sbjct: 1109 cctgatatattctgggattacacgagccgcaaggtgctaacaatggaatgggttgaggga 1168 Query: 387 gtaaaacttaatcaacaagctgccattgaaggccaaggcttgaaggtcttggacttggtg 446 ||||| ||| | ||| ||||||||| | || || |||||||| |||| | ||| Sbjct: 1169 actaaactgaatgagcaacttgccattgagagtcagggattgaaggttctggatctcgtg 1228 Query: 447 aacattggtatccagtgtagcctaaggcagctactagagtatggttactttcatgctgac 506 || | || |||||||||||||||||||| || | |||||||| | || ||||||||| Sbjct: 1229 aatacaggaatccagtgtagcctaaggcaactcttggagtatggctttttccatgctgac 1288 Query: 507 ccgcatcctggtaatattttggcaacacctgaagggaagcttgcttttcttgattttggc 566 || |||||||||||| | |||||||||||||| || || ||||| ||||| || |||||| Sbjct: 1289 cctcatcctggtaatctcttggcaacacctgatggaaaacttgcctttctagactttggc 1348 Query: 567 atgatgagtgaaaccccagaggatgcaagggtagccatcatagggcatgtcgttcacatg 626 ||||||||||| || |||||||| || || | || |||||||| ||||| || || | Sbjct: 1349 atgatgagtgagacaccagaggaagctagatttgctatcataggccatgttgtccattta 1408 Query: 627 gtcaatcgggattatgaagcgatggctcgtgattattatgc 667 || || || ||||||||||| ||||| || ||||| ||||| Sbjct: 1409 gtgaaccgagattatgaagccatggcacgagattactatgc 1449 Score = 40.1 bits (20), Expect = 9.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 96 gctgtcaaggtgcaaagacctggcatcgaggatgccataggccgtgatttttacct 151 |||||||| || ||| | ||||| ||||| || ||||| |||| |||||||||||| Sbjct: 878 gctgtcaaagttcaacgccctgggatcgaagaagccattggccttgatttttacct 933
>emb|BX815640.1|CNS0AE07 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS79ZG07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2387 Score = 121 bits (61), Expect = 3e-24 Identities = 271/341 (79%) Strand = Plus / Plus Query: 327 cctgatatattttgggattacacaagtgcaaaggtactgacaatggaatggattgagggt 386 ||||||||||| ||||||||||| || ||||| || |||||||||||| ||||||| Sbjct: 1088 cctgatatattctgggattacacgagccgcaaggtgctaacaatggaatgggttgaggga 1147 Query: 387 gtaaaacttaatcaacaagctgccattgaaggccaaggcttgaaggtcttggacttggtg 446 ||||| ||| | ||| ||||||||| | || || |||||||| |||| | ||| Sbjct: 1148 actaaactgaatgagcaacttgccattgagagtcagggattgaaggttctggatctcgtg 1207 Query: 447 aacattggtatccagtgtagcctaaggcagctactagagtatggttactttcatgctgac 506 || | || |||||||||||||||||||| || | |||||||| | || ||||||||| Sbjct: 1208 aatacaggaatccagtgtagcctaaggcaactcttggagtatggctttttccatgctgac 1267 Query: 507 ccgcatcctggtaatattttggcaacacctgaagggaagcttgcttttcttgattttggc 566 || |||||||||||| | |||||||||||||| || || ||||| ||||| || |||||| Sbjct: 1268 cctcatcctggtaatctcttggcaacacctgatggaaaacttgcctttctagactttggc 1327 Query: 567 atgatgagtgaaaccccagaggatgcaagggtagccatcatagggcatgtcgttcacatg 626 ||||||||||| || |||||||| || || | || |||||||| ||||| || || | Sbjct: 1328 atgatgagtgagacaccagaggaagctagatttgctatcataggccatgttgtccattta 1387 Query: 627 gtcaatcgggattatgaagcgatggctcgtgattattatgc 667 || || || ||||||||||| ||||| || ||||| ||||| Sbjct: 1388 gtgaaccgagattatgaagccatggcacgagattactatgc 1428 Score = 40.1 bits (20), Expect = 9.3 Identities = 47/56 (83%) Strand = Plus / Plus Query: 96 gctgtcaaggtgcaaagacctggcatcgaggatgccataggccgtgatttttacct 151 |||||||| || ||| | ||||| ||||| || ||||| |||| |||||||||||| Sbjct: 858 gctgtcaaagttcaacgccctgggatcgaagaagccattggccttgatttttacct 913
>gb|AC010793.3|AC010793 Genomic sequence for Arabidopsis thaliana BAC F20B17 from chromosome I, complete sequence Length = 90149 Score = 121 bits (61), Expect = 3e-24 Identities = 271/341 (79%) Strand = Plus / Minus Query: 327 cctgatatattttgggattacacaagtgcaaaggtactgacaatggaatggattgagggt 386 ||||||||||| ||||||||||| || ||||| || |||||||||||| ||||||| Sbjct: 14016 cctgatatattctgggattacacgagccgcaaggtgctaacaatggaatgggttgaggga 13957 Query: 387 gtaaaacttaatcaacaagctgccattgaaggccaaggcttgaaggtcttggacttggtg 446 ||||| ||| | ||| ||||||||| | || || |||||||| |||| | ||| Sbjct: 13956 actaaactgaatgagcaacttgccattgagagtcagggattgaaggttctggatctcgtg 13897 Query: 447 aacattggtatccagtgtagcctaaggcagctactagagtatggttactttcatgctgac 506 || | || |||||||||||||||||||| || | |||||||| | || ||||||||| Sbjct: 13896 aatacaggaatccagtgtagcctaaggcaactcttggagtatggctttttccatgctgac 13837 Query: 507 ccgcatcctggtaatattttggcaacacctgaagggaagcttgcttttcttgattttggc 566 || |||||||||||| | |||||||||||||| || || ||||| ||||| || |||||| Sbjct: 13836 cctcatcctggtaatctcttggcaacacctgatggaaaacttgcctttctagactttggc 13777 Query: 567 atgatgagtgaaaccccagaggatgcaagggtagccatcatagggcatgtcgttcacatg 626 ||||||||||| || |||||||| || || | || |||||||| ||||| || || | Sbjct: 13776 atgatgagtgagacaccagaggaagctagatttgctatcataggccatgttgtccattta 13717 Query: 627 gtcaatcgggattatgaagcgatggctcgtgattattatgc 667 || || || ||||||||||| ||||| || ||||| ||||| Sbjct: 13716 gtgaaccgagattatgaagccatggcacgagattactatgc 13676 Score = 40.1 bits (20), Expect = 9.3 Identities = 47/56 (83%) Strand = Plus / Minus Query: 96 gctgtcaaggtgcaaagacctggcatcgaggatgccataggccgtgatttttacct 151 |||||||| || ||| | ||||| ||||| || ||||| |||| |||||||||||| Sbjct: 14247 gctgtcaaagttcaacgccctgggatcgaagaagccattggccttgatttttacct 14192
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 48.1 bits (24), Expect = 0.038 Identities = 69/84 (82%) Strand = Plus / Minus Query: 494 ctttcatgctgacccgcatcctggtaatattttggcaacacctgaagggaagcttgcttt 553 |||||| |||||||| ||||||||||| | || || ||||| || || || || |||| Sbjct: 5917394 ctttcacgctgacccccatcctggtaacttgttagccacaccagacggtaaactcgctta 5917335 Query: 554 tcttgattttggcatgatgagtga 577 |||||| ||||| ||||||||||| Sbjct: 5917334 tcttgactttgggatgatgagtga 5917311 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 gcagctagtttaggtcaagt 58 |||||||||||||||||||| Sbjct: 688630 gcagctagtttaggtcaagt 688611
>emb|CR450770.21| Zebrafish DNA sequence from clone DKEY-161M5 in linkage group 8, complete sequence Length = 153753 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 160 gacttggttttctaataaataag 182 ||||||||||||||||||||||| Sbjct: 1278 gacttggttttctaataaataag 1300
>emb|CR847854.12| Zebrafish DNA sequence from clone DKEY-229J6 in linkage group 8, complete sequence Length = 155365 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 160 gacttggttttctaataaataag 182 ||||||||||||||||||||||| Sbjct: 150462 gacttggttttctaataaataag 150484
>gb|AC167023.2| Mus musculus BAC clone RP23-21J7 from chromosome 7, complete sequence Length = 214762 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 592 caagggtagccatcatagggc 612 ||||||||||||||||||||| Sbjct: 160661 caagggtagccatcatagggc 160681
>gb|AC125226.3| Mus musculus BAC clone RP23-39D21 from 7, complete sequence Length = 133624 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 592 caagggtagccatcatagggc 612 ||||||||||||||||||||| Sbjct: 26350 caagggtagccatcatagggc 26370
>emb|CR714488.2|CNS0GE90 Tetraodon nigroviridis full-length cDNA Length = 875 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 gcaacacctgaagggaagctt 548 ||||||||||||||||||||| Sbjct: 23 gcaacacctgaagggaagctt 3
>emb|CR679254.2|CNS0FN2A Tetraodon nigroviridis full-length cDNA Length = 1175 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 gcaacacctgaagggaagctt 548 ||||||||||||||||||||| Sbjct: 323 gcaacacctgaagggaagctt 303
>emb|CR642475.2|CNS0EUPD Tetraodon nigroviridis full-length cDNA Length = 1330 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 528 gcaacacctgaagggaagctt 548 ||||||||||||||||||||| Sbjct: 373 gcaacacctgaagggaagctt 353
>emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome; segment 7/7 Length = 318136 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 366 acaatggaatggattgagggtgtaaaact 394 ||||||||||||||||| || |||||||| Sbjct: 315033 acaatggaatggattgatggagtaaaact 315061
>gb|AC099726.6| Mus musculus chromosome 7, clone RP23-342H24, complete sequence Length = 217218 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gctgttgctctgatagatga 226 |||||||||||||||||||| Sbjct: 105879 gctgttgctctgatagatga 105860
>gb|AC102686.7| Mus musculus chromosome 1, clone RP24-467J24, complete sequence Length = 156547 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 ttggtccctgatatattttg 340 |||||||||||||||||||| Sbjct: 29686 ttggtccctgatatattttg 29667
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 520 atattttggcaacacctgaa 539 |||||||||||||||||||| Sbjct: 5185204 atattttggcaacacctgaa 5185185
>gb|AC103947.20| Mus musculus chromosome 19, clone RP23-261A21, complete sequence Length = 245390 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 535 ctgaagggaagcttgctttt 554 |||||||||||||||||||| Sbjct: 126552 ctgaagggaagcttgctttt 126533
>gb|AC127696.4| Mus musculus BAC clone RP23-459J11 from chromosome 7, complete sequence Length = 168580 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gctgttgctctgatagatga 226 |||||||||||||||||||| Sbjct: 23693 gctgttgctctgatagatga 23674
>gb|AC102426.6| Mus musculus chromosome 1, clone RP24-88A10, complete sequence Length = 192016 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ttggtccctgatatattttg 340 |||||||||||||||||||| Sbjct: 43848 ttggtccctgatatattttg 43867
>emb|AL591944.8| Human DNA sequence from clone RP11-611P22 on chromosome Xq13.2-21.1, complete sequence Length = 169856 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 agagttttccaagagcttaa 256 |||||||||||||||||||| Sbjct: 122416 agagttttccaagagcttaa 122397
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 gacttggttttctaataaat 179 |||||||||||||||||||| Sbjct: 3131721 gacttggttttctaataaat 3131740
>gb|AE014287.1| Streptococcus agalactiae 2603V/R section 97 of 100 of the complete genome Length = 21231 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 acttggttttctaataaata 180 |||||||||||||||||||| Sbjct: 13880 acttggttttctaataaata 13899
>emb|BX322794.6| Zebrafish DNA sequence from clone RP71-44B8 in linkage group 23, complete sequence Length = 144572 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 658 attattatgcacttgatttt 677 |||||||||||||||||||| Sbjct: 19695 attattatgcacttgatttt 19714
>gb|AC035138.9| Homo sapiens chromosome 10 clone RP11-314D6, complete sequence Length = 184328 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 559 attttggcatgatgagtgaa 578 |||||||||||||||||||| Sbjct: 120242 attttggcatgatgagtgaa 120261
>gb|AY099513.1| Danio rerio H+ transporting lysosomal ATPase subunit 1, (atp6s1) mRNA, complete cds Length = 2034 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 attattatgcacttgatttt 677 |||||||||||||||||||| Sbjct: 1780 attattatgcacttgatttt 1761
>emb|BX664604.6| Zebrafish DNA sequence from clone CH211-253F20 in linkage group 7, complete sequence Length = 150508 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ttggttttctaataaataag 182 |||||||||||||||||||| Sbjct: 6022 ttggttttctaataaataag 6041
>gb|AC098982.7| Rattus norvegicus BAC CH230-46O20 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 227790 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 aaggtttaaaaagttatatg 303 |||||||||||||||||||| Sbjct: 35844 aaggtttaaaaagttatatg 35863
>gb|AC092162.3| Homo sapiens BAC clone RP11-632P5 from 2, complete sequence Length = 155011 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 ggacttggtgaacattggta 456 |||||||||||||||||||| Sbjct: 63225 ggacttggtgaacattggta 63244
>gb|AC105762.4| Homo sapiens BAC clone RP11-689P15 from 2, complete sequence Length = 76326 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 gaggggacttggttttctaa 174 |||||||||||||||||||| Sbjct: 30278 gaggggacttggttttctaa 30259
>ref|NM_173265.1| Danio rerio ATPase, H+ transporting, lysosomal accessory protein 1 (atp6ap1), mRNA Length = 2034 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 658 attattatgcacttgatttt 677 |||||||||||||||||||| Sbjct: 1780 attattatgcacttgatttt 1761
>gb|AC017006.4| Homo sapiens BAC clone RP11-110G2 from 2, complete sequence Length = 191953 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 atttttacctactgagggga 161 |||||||||||||||||||| Sbjct: 15567 atttttacctactgagggga 15586
>emb|AL772314.9| Zebrafish DNA sequence from clone DKEY-89B17 in linkage group 19, complete sequence Length = 185640 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 aaggtttaaaaagttatatg 303 |||||||||||||||||||| Sbjct: 36600 aaggtttaaaaagttatatg 36619
>gb|DQ325904.1| Uncultured bacterium clone B725 16S ribosomal RNA gene, partial sequence Length = 1360 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 gaagggaagcttgcttttct 556 |||||||||||||||||||| Sbjct: 46 gaagggaagcttgcttttct 65
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 9.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 474 cagctactagagtatggttactttcatgctga 505 |||||||| || |||||||| ||||||||||| Sbjct: 1041231 cagctacttgaatatggttattttcatgctga 1041262
>emb|AL845287.10| Zebrafish DNA sequence from clone DKEY-78K11, complete sequence Length = 174301 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 658 attattatgcacttgatttt 677 |||||||||||||||||||| Sbjct: 60833 attattatgcacttgatttt 60852
>emb|AL772316.6| Mouse DNA sequence from clone RP23-19G2 on chromosome 4, complete sequence Length = 167141 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 535 ctgaagggaagcttgctttt 554 |||||||||||||||||||| Sbjct: 76414 ctgaagggaagcttgctttt 76433 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,326,932 Number of Sequences: 3902068 Number of extensions: 6326932 Number of successful extensions: 111612 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 43 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 111375 Number of HSP's gapped (non-prelim): 220 length of query: 680 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 657 effective length of database: 17,143,297,704 effective search space: 11263146591528 effective search space used: 11263146591528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)