| Clone Name | baal39l02 |
|---|---|
| Clone Library Name | barley_pub |
>SCRK2_ORYSA (Q944F5) Fructokinase-2 (EC 2.7.1.4) (Fructokinase II) (OsFKII)| Length = 336 Score = 156 bits (395), Expect = 3e-38 Identities = 80/136 (58%), Positives = 95/136 (69%) Frame = +3 Query: 159 VVCFGELLIDFVPTVSGVSLSDXXXXXXXXXXXXXXXXXXXXRLGGSAAFIGKVGDDEFG 338 VV FGE+LIDFVP V+GVSL++ +LGGS+AF+GK GDDEFG Sbjct: 19 VVSFGEMLIDFVPDVAGVSLAESGGFVKAPGGAPANVACAISKLGGSSAFVGKFGDDEFG 78 Query: 339 YMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMFYRNPSAXXXXXXXXXXXX 518 +ML D+LK+N VN +G LFD HARTALAFVTL+S+GEREFMFYRNPSA Sbjct: 79 HMLVDILKKNGVNAEGCLFDEHARTALAFVTLKSNGEREFMFYRNPSADMLLTEAELNLD 138 Query: 519 XIRKAKIFHHGSISLI 566 IR+AKIFH+GSISLI Sbjct: 139 LIRRAKIFHYGSISLI 154
>SCRK2_MAIZE (Q6XZ78) Fructokinase-2 (EC 2.7.1.4) (ZmFRK2)| Length = 335 Score = 154 bits (390), Expect = 1e-37 Identities = 82/163 (50%), Positives = 102/163 (62%) Frame = +3 Query: 78 APLQKSAVCTKAISNSDGTPGTSDSPHVVCFGELLIDFVPTVSGVSLSDXXXXXXXXXXX 257 APL A SN+ VV FGE+LIDFVP V+G+SL++ Sbjct: 2 APLGDGGAAAAAASNN----------LVVSFGEMLIDFVPDVAGLSLAESGGFVKAPGGA 51 Query: 258 XXXXXXXXXRLGGSAAFIGKVGDDEFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTLR 437 +LGGS+AF+GK GDDEFG+ML ++LK+NNVN +G LFD HARTALAFVTL+ Sbjct: 52 PANVACAIAKLGGSSAFVGKFGDDEFGHMLVNILKQNNVNAEGCLFDKHARTALAFVTLK 111 Query: 438 SDGEREFMFYRNPSAXXXXXXXXXXXXXIRKAKIFHHGSISLI 566 DGEREFMFYRNPSA +R+A++FH+GSISLI Sbjct: 112 HDGEREFMFYRNPSADMLLTEAELDLGLVRRARVFHYGSISLI 154
>SCRK_SOLTU (P37829) Fructokinase (EC 2.7.1.4)| Length = 319 Score = 149 bits (376), Expect = 5e-36 Identities = 77/136 (56%), Positives = 91/136 (66%) Frame = +3 Query: 159 VVCFGELLIDFVPTVSGVSLSDXXXXXXXXXXXXXXXXXXXXRLGGSAAFIGKVGDDEFG 338 +V FGE+LIDFVPTVSGVSL++ RLGG +AF+GK+GDDEFG Sbjct: 13 IVSFGEMLIDFVPTVSGVSLAEAPGFLKAPGGAPANVAIAVTRLGGKSAFVGKLGDDEFG 72 Query: 339 YMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMFYRNPSAXXXXXXXXXXXX 518 +ML+ +LK N V G+ FD ARTALAFVTLR+DGEREFMFYRNPSA Sbjct: 73 HMLAGILKTNGVQADGINFDKGARTALAFVTLRADGEREFMFYRNPSADMLLTPDELNLD 132 Query: 519 XIRKAKIFHHGSISLI 566 IR AK+FH+GSISLI Sbjct: 133 LIRSAKVFHYGSISLI 148
>SCRK1_MAIZE (Q6XZ79) Fructokinase-1 (EC 2.7.1.4) (ZmFRK1)| Length = 323 Score = 149 bits (375), Expect = 7e-36 Identities = 75/136 (55%), Positives = 95/136 (69%) Frame = +3 Query: 159 VVCFGELLIDFVPTVSGVSLSDXXXXXXXXXXXXXXXXXXXXRLGGSAAFIGKVGDDEFG 338 VV FGE+LIDFVPTV+GVSL++ RLGG AAF+GK+GDDEFG Sbjct: 8 VVSFGEMLIDFVPTVAGVSLAEAPAFLKAPGGAPANVAIAVSRLGGGAAFVGKLGDDEFG 67 Query: 339 YMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMFYRNPSAXXXXXXXXXXXX 518 ML+ +L++N V++ G++FD+ ARTALAFVTLR+DGEREFMFYRNPSA Sbjct: 68 RMLAAILRDNGVDDGGVVFDSGARTALAFVTLRADGEREFMFYRNPSADMLLTADELNVE 127 Query: 519 XIRKAKIFHHGSISLI 566 I++A +FH+GSISLI Sbjct: 128 LIKRAAVFHYGSISLI 143
>SCRK1_ORYSA (Q944F4) Fructokinase-1 (EC 2.7.1.4) (Fructokinase I) (OsFKI)| Length = 323 Score = 148 bits (374), Expect = 9e-36 Identities = 75/136 (55%), Positives = 94/136 (69%) Frame = +3 Query: 159 VVCFGELLIDFVPTVSGVSLSDXXXXXXXXXXXXXXXXXXXXRLGGSAAFIGKVGDDEFG 338 VV FGE+LIDFVPTV+GVSL++ RLGG AAF+GK+GDDEFG Sbjct: 8 VVSFGEMLIDFVPTVAGVSLAEAPAFVKAPGGAPANVAIAVARLGGGAAFVGKLGDDEFG 67 Query: 339 YMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMFYRNPSAXXXXXXXXXXXX 518 ML+ +L++N V++ G++FD ARTALAFVTLR+DGEREFMFYRNPSA Sbjct: 68 RMLAAILRDNGVDDGGVVFDAGARTALAFVTLRADGEREFMFYRNPSADMLLTHAELNVE 127 Query: 519 XIRKAKIFHHGSISLI 566 I++A +FH+GSISLI Sbjct: 128 LIKRAAVFHYGSISLI 143
>YDJE_BACSU (O34768) Hypothetical sugar kinase ydjE| Length = 320 Score = 86.3 bits (212), Expect = 6e-17 Identities = 53/139 (38%), Positives = 67/139 (48%) Frame = +3 Query: 150 SPHVVCFGELLIDFVPTVSGVSLSDXXXXXXXXXXXXXXXXXXXXRLGGSAAFIGKVGDD 329 S VVC GELLIDF T V L + +LGG AAF GKVG D Sbjct: 3 SHSVVCIGELLIDFFCTDVDVDLMEGRQFLKSAGGAPANVSAAIAKLGGDAAFSGKVGKD 62 Query: 330 EFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMFYRNPSAXXXXXXXXX 509 FGY L L +V+ L+ D A T LAFV+L+ +GER+F+F N A Sbjct: 63 PFGYFLKRTLDAVHVDTSMLVMDEKAPTTLAFVSLKQNGERDFVF--NRGADALFTLEDI 120 Query: 510 XXXXIRKAKIFHHGSISLI 566 + +AKI H GS + + Sbjct: 121 DQEKLNEAKILHFGSATAL 139
>SCRK_VIBAL (P22824) Fructokinase (EC 2.7.1.4)| Length = 307 Score = 55.5 bits (132), Expect = 1e-07 Identities = 28/66 (42%), Positives = 36/66 (54%) Frame = +3 Query: 285 RLGGSAAFIGKVGDDEFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMF 464 RL G +AF G+VGDD FG + +L + V + L+ D RT+ V L GER F F Sbjct: 39 RLSGKSAFFGRVGDDPFGRFMQSILDQEGVCTEFLIKDPEQRTSTVVVDLDDQGERSFTF 98 Query: 465 YRNPSA 482 PSA Sbjct: 99 MVKPSA 104
>SCRK_KLEPN (P26420) Fructokinase (EC 2.7.1.4)| Length = 307 Score = 55.1 bits (131), Expect = 1e-07 Identities = 29/66 (43%), Positives = 36/66 (54%) Frame = +3 Query: 285 RLGGSAAFIGKVGDDEFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMF 464 RLGG + FIG+VGDD FG + L + V+ + D RT+ V L S GER F F Sbjct: 40 RLGGDSGFIGRVGDDPFGRFMRHTLAQEQVDVNYMRLDAAQRTSTVVVDLDSHGERTFTF 99 Query: 465 YRNPSA 482 PSA Sbjct: 100 MVRPSA 105
>SCRK_ECOLI (P40713) Fructokinase (EC 2.7.1.4)| Length = 307 Score = 53.5 bits (127), Expect = 4e-07 Identities = 29/66 (43%), Positives = 36/66 (54%) Frame = +3 Query: 285 RLGGSAAFIGKVGDDEFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMF 464 RLGG++ FIG+VGDD FG ++ L V+ L D RT+ V L GER F F Sbjct: 40 RLGGTSGFIGRVGDDPFGALMQRTLLTEGVDITYLKQDEWHRTSTVLVDLNDQGERSFTF 99 Query: 465 YRNPSA 482 PSA Sbjct: 100 MVRPSA 105
>Y1459_PYRHO (O59128) Hypothetical sugar kinase PH1459| Length = 310 Score = 52.4 bits (124), Expect = 9e-07 Identities = 38/135 (28%), Positives = 57/135 (42%) Frame = +3 Query: 159 VVCFGELLIDFVPTVSGVSLSDXXXXXXXXXXXXXXXXXXXXRLGGSAAFIGKVGDDEFG 338 + GELLID + G L D RLG ++ I KVG+D FG Sbjct: 8 IASIGELLIDLISVEEG-DLKDVRLFEKHPGGAPANVAVGVSRLGVKSSLISKVGNDPFG 66 Query: 339 YMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMFYRNPSAXXXXXXXXXXXX 518 L + L + NV+ +G++ D T + FV L+ F+ Y + A Sbjct: 67 EYLIEELSKENVDTRGIVKDEKKHTGIVFVQLKG-ASPSFLLY-DDVAYFNMTLNDINWD 124 Query: 519 XIRKAKIFHHGSISL 563 + +AKI + GS+ L Sbjct: 125 IVEEAKIVNFGSVIL 139
>SCRK_SALTY (P26984) Fructokinase (EC 2.7.1.4)| Length = 307 Score = 51.6 bits (122), Expect = 2e-06 Identities = 27/66 (40%), Positives = 35/66 (53%) Frame = +3 Query: 285 RLGGSAAFIGKVGDDEFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMF 464 RLGG++ FIG VG D FG + L++ V+ + D RT+ V L GER F F Sbjct: 40 RLGGNSGFIGAVGGDPFGRYMRHTLQQEQVDVSHMYLDDQHRTSTVVVDLDDQGERTFTF 99 Query: 465 YRNPSA 482 PSA Sbjct: 100 MVRPSA 105
>IOLC_BACSU (P42414) Protein iolC| Length = 325 Score = 39.3 bits (90), Expect = 0.008 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 1/86 (1%) Frame = +3 Query: 285 RLGGSAAFIGKVGDDEFGYMLSDMLKENNVNNQGLLFDTHARTA-LAFVTLRSDGEREFM 461 +LG A FIGK+ DD+ G + +++ V+ ++ D A LAF + S E + Sbjct: 55 KLGLKAGFIGKIPDDQHGRFIESYMRKTGVDTTQMIVDQDGHKAGLAFTEILSPEECSIL 114 Query: 462 FYRNPSAXXXXXXXXXXXXXIRKAKI 539 YR+ A I AK+ Sbjct: 115 MYRDDVADLYLEPSEVSEDYIANAKM 140
>YURL_BACSU (O32153) Hypothetical sugar kinase yurL| Length = 284 Score = 38.1 bits (87), Expect = 0.017 Identities = 22/59 (37%), Positives = 32/59 (54%) Frame = +3 Query: 285 RLGGSAAFIGKVGDDEFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFM 461 RLG +++IG VG+DE L ++LK V N + H +A VTL G+R F+ Sbjct: 35 RLGHESSYIGIVGNDEAAAHLLNVLKLEQV-NADYIRQAHGENGMAIVTLDEQGDRIFV 92
>YIHV_ECOLI (P32143) Hypothetical sugar kinase yihV| Length = 298 Score = 37.4 bits (85), Expect = 0.030 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 4/110 (3%) Frame = +3 Query: 159 VVCFGELLIDFVPTVSGVSLSDXXXXXXXXXXX----XXXXXXXXXRLGGSAAFIGKVGD 326 V C G ++D + V G+ RLG FIG+VGD Sbjct: 4 VACVGITVMDRIYYVEGLPTESGKYVARNYTEVGGGPAATAAVAAARLGAQVDFIGRVGD 63 Query: 327 DEFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMFYRNP 476 D+ G L L+ VN + A+++ + + + + GER + Y +P Sbjct: 64 DDTGNSLLAELESWGVNTRYTKRYNQAKSSQSAIMVDTKGERIIINYPSP 113
>RBSK_BACSU (P36945) Ribokinase (EC 2.7.1.15)| Length = 293 Score = 37.0 bits (84), Expect = 0.039 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +3 Query: 285 RLGGSAAFIGKVGDDEFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTL 434 RLG +GKVGDD +G + + LK N V + TH + A + L Sbjct: 50 RLGAQVFMVGKVGDDHYGTAILNNLKANGVRTDYMEPVTHTESGTAHIVL 99
>SCRK_RHILT (P42720) Fructokinase (EC 2.7.1.4)| Length = 326 Score = 36.2 bits (82), Expect = 0.066 Identities = 35/136 (25%), Positives = 53/136 (38%) Frame = +3 Query: 159 VVCFGELLIDFVPTVSGVSLSDXXXXXXXXXXXXXXXXXXXXRLGGSAAFIGKVGDDEFG 338 ++C GE LID +P + + RLG AF + DD G Sbjct: 2 ILCCGEALIDMLPRDTTLG---EKGFAPYAGGAIFNTAIALGRLGIPTAFFTGIADDMMG 58 Query: 339 YMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMFYRNPSAXXXXXXXXXXXX 518 +L + LK +NV+ T + +AFV L +G+ + FY +A Sbjct: 59 EILLETLKASNVDYSPCAI-TPRPSTIAFVKL-VNGQATYAFYDEGTAGRMITTADLPDL 116 Query: 519 XIRKAKIFHHGSISLI 566 + H G+ISLI Sbjct: 117 G-DDCEALHFGAISLI 131
>RBSK_HUMAN (Q9H477) Ribokinase (EC 2.7.1.15)| Length = 322 Score = 34.7 bits (78), Expect = 0.19 Identities = 19/85 (22%), Positives = 36/85 (42%) Frame = +3 Query: 285 RLGGSAAFIGKVGDDEFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMF 464 RLG + + KVG D FG + LK+N+++ + A T A + + ++G+ + Sbjct: 64 RLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVI 123 Query: 465 YRNPSAXXXXXXXXXXXXXIRKAKI 539 + I +AK+ Sbjct: 124 VAGANLLLNTEDLRAAANVISRAKV 148
>RBSK_BACHD (Q9K6K1) Ribokinase (EC 2.7.1.15)| Length = 294 Score = 34.7 bits (78), Expect = 0.19 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +3 Query: 285 RLGGSAAFIGKVGDDEFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGER 452 RLG + IG+VGDD FG++L++ L + + + T + +A + L R Sbjct: 52 RLGANVRMIGRVGDDPFGHVLTENLAKEGIITDSVKPVTDCTSGVATILLSDRDNR 107
>LIP4_CANRU (P32948) Lipase 4 precursor (EC 3.1.1.3)| Length = 549 Score = 33.1 bits (74), Expect = 0.56 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = +3 Query: 60 LASAARAPLQKSAVCTKAISNSDGTPGTSDSPHVVCFGELLIDFVPTVSGVSLSD 224 +ASA C ++ISN TSD+P + + L + F+P G ++D Sbjct: 278 VASAGCGSASDKLACLRSISNDKLFQATSDTPGALAYPSLRLSFLPRPDGTFITD 332
>KDGK_HAEIN (P44482) 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45)| (2-keto-3-deoxygluconokinase) (3-deoxy-2-oxo-D-gluconate kinase) (KDG kinase) Length = 314 Score = 32.0 bits (71), Expect = 1.3 Identities = 14/59 (23%), Positives = 28/59 (47%) Frame = +3 Query: 306 FIGKVGDDEFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMFYRNPSA 482 ++ +G D + + + + +L D + L + L + GER F+++RN SA Sbjct: 50 YVSALGTDNLSKQMLKYWQADGIQTNWVLQDEQHQPGLYLIQLDAQGERTFLYWRNQSA 108
>Y356_ARCFU (O29891) Hypothetical sugar kinase AF0356| Length = 250 Score = 30.8 bits (68), Expect = 2.8 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = +3 Query: 285 RLGGSAAFIGKVGDDEFG-YMLSDMLKENNVNNQGLLFDTHARTALAFV 428 RLG A+IGKVG DE G +L+D +E + + + + TA+ FV Sbjct: 5 RLGIETAYIGKVGSDEEGRILLADFEREGVSTDFVIRAEGRSGTAMIFV 53
>PFA3_YEAST (P42836) Palmitoyltransferase PFA3 (EC 2.3.1.-) (Protein fatty| acyltransferase 3) Length = 336 Score = 26.2 bits (56), Expect(2) = 3.9 Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 5/31 (16%) Frame = -2 Query: 473 ITIKHEFTFTVTSKCH-----KCQSCSSMSI 396 +T+KH+ F V CH +C CSS + Sbjct: 95 LTLKHDGRFRVCQVCHVWKPDRCHHCSSCDV 125 Score = 22.7 bits (47), Expect(2) = 3.9 Identities = 8/31 (25%), Positives = 18/31 (58%) Frame = -1 Query: 360 SACQIACIQIHHHQPFQ*KLLSHRDELFQLQ 268 S+C + +++ HH P+ + R++ F +Q Sbjct: 121 SSCDVCILKMDHHCPWFAECTGFRNQKFFIQ 151
>KDGK_BACSU (P50845) 2-dehydro-3-deoxygluconokinase (EC 2.7.1.45)| (2-keto-3-deoxygluconokinase) (3-deoxy-2-oxo-D-gluconate kinase) (KDG kinase) Length = 324 Score = 30.0 bits (66), Expect = 4.8 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 1/108 (0%) Frame = +3 Query: 162 VCFGELLIDFVPTVSGVSLSDXXXXXXXXXXXXXXXXXXXXRLGGSAAFIGKVGDDEFG- 338 V FGE + F G L + RLG ++ KVG+D+ G Sbjct: 6 VTFGESMAMFYANEYG-GLHEVSTFSKGLAGAESNVACGLARLGFRMGWMSKVGNDQLGT 64 Query: 339 YMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFMFYRNPSA 482 ++L ++ KE ++ + T L + +G+ + +YR SA Sbjct: 65 FILQELKKEGVDVSRVIRSQDENPTGLLLKSKVKEGDPQVTYYRKNSA 112
>IRX3_HUMAN (P78415) Iroquois-class homeodomain protein IRX-3 (Iroquois| homeobox protein 3) (Homeodomain protein IRXB1) Length = 501 Score = 30.0 bits (66), Expect = 4.8 Identities = 19/66 (28%), Positives = 28/66 (42%) Frame = -3 Query: 208 PLTVGTKSISNSPKQTTCGESLVPGVPSLFEIALVQTADFWSGARAAEASGRKKRLPPTR 29 P+ V + S+ + P SL P P+ + +Q WS A A + +R PP Sbjct: 316 PVAVASPSLPSPPV------SLDPCAPAPAPASALQKPKIWSLAETATSPDNPRRSPPGA 369 Query: 28 GGGEEG 11 GG G Sbjct: 370 GGSPPG 375
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from transposon TNT| 1-94 [Includes: Protease (EC 3.4.23.-); Reverse transcriptase (EC 2.7.7.49); Endonuclease] Length = 1328 Score = 30.0 bits (66), Expect = 4.8 Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 1/38 (2%) Frame = +3 Query: 306 FIGKVGDDEFGYMLSDMLKENNVNNQGLLF-DTHARTA 416 FIG GD+EFGY L D +K+ + ++ ++F ++ RTA Sbjct: 676 FIG-YGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTA 712
>LIP2_CANRU (P32946) Lipase 2 precursor (EC 3.1.1.3)| Length = 548 Score = 30.0 bits (66), Expect = 4.8 Identities = 14/55 (25%), Positives = 25/55 (45%) Frame = +3 Query: 60 LASAARAPLQKSAVCTKAISNSDGTPGTSDSPHVVCFGELLIDFVPTVSGVSLSD 224 +ASA C + +S TSD+P V+ + L + ++P G ++D Sbjct: 277 VASAGCGSASDKLACLRGLSQDTLYQATSDTPGVLAYPSLRLSYLPRPDGTFITD 331
>RBSK_HAEIN (P44331) Ribokinase (EC 2.7.1.15)| Length = 306 Score = 30.0 bits (66), Expect = 4.8 Identities = 13/59 (22%), Positives = 25/59 (42%) Frame = +3 Query: 285 RLGGSAAFIGKVGDDEFGYMLSDMLKENNVNNQGLLFDTHARTALAFVTLRSDGEREFM 461 RLG AFI +G D G + + + ++ + + T +AF+ + E + Sbjct: 51 RLGAKVAFISCIGSDSIGKTMKNAFAQEGIDTTHINTVSQEMTGMAFIQVAKSSENSIV 109
>CILP1_HUMAN (O75339) Cartilage intermediate layer protein 1 precursor (CILP-1)| (Cartilage intermediate-layer protein) [Contains: Cartilage intermediate layer protein 1 C1; Cartilage intermediate layer protein 1 C2] Length = 1184 Score = 29.3 bits (64), Expect = 8.1 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +2 Query: 128 WHPWNERFSTCGLFWGITDRLRPNC*WRVIVRCTSLQEGSRGCTGQCC 271 W PW++ + CG G+ R R C ++ C+ E + C GQ C Sbjct: 155 WSPWSKCSAACGQ-TGVQTRTR-ICLAEMVSLCSEASEEGQHCMGQDC 200 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,503,907 Number of Sequences: 219361 Number of extensions: 1209509 Number of successful extensions: 3172 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 3093 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3166 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4700377760 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)