ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal39k14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478106.1| Oryza sativa (japonica cultivar-group), mRNA Length = 873 Score = 244 bits (123), Expect = 3e-61 Identities = 273/323 (84%) Strand = Plus / Plus Query: 246 ggcggcggcgatggaggcagtggagcgagacgccgccgccatcgccgagagctacgcctc 305 |||||||||||||||||| |||||||| |||| |||||||||| |||| ||||||||||| Sbjct: 197 ggcggcggcgatggaggcggtggagcgggacgtcgccgccatctccgacagctacgcctc 256 Query: 306 cctattcgcctccctccgcatcacgctttccaatgttacctcgacgtcagcggataacat 365 ||| ||||||||||||||| || | || |||| || ||||||||||| ||||| ||||| Sbjct: 257 cctcttcgcctccctccgcgtcgccctcgccaacgtcacctcgacgtcggcggagaacat 316 Query: 366 ggagtgcttgggcgaagttgtaggccgcctccaggagtcagcacttgaagcgtcttctag 425 ||||||| |||| || || || ||||||||||| || || ||||| ||||| ||||| | Sbjct: 317 ggagtgcctgggagacgtcgtcggccgcctccaagaatccgcactcgaagcttcttcgaa 376 Query: 426 agggaataagtacatccattcgtgcctgaggttaaatgaggaaatgcgaggcttggaaag 485 ||| |||||||||||| |||||||| ||||||| |||||||||||| |||| ||||||| Sbjct: 377 aggaaataagtacatcaattcgtgcttgaggttgaatgaggaaatgagaggtctggaaag 436 Query: 486 cctaagtatgcagctaaagatcatgcggaagatcgttgattcactagatttggctgttga 545 |||| ||||| |||||||| | ||||||| |||||||||||||| |||||||| | Sbjct: 437 cctagccatgcaactaaagattttacggaagaatgttgattcactagacttggctgtcaa 496 Query: 546 tcggctgctccacctcccgtagt 568 || | |||||| |||||| |||| Sbjct: 497 tcagttgctccgcctcccctagt 519
>dbj|AK108064.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-B06, full insert sequence Length = 873 Score = 244 bits (123), Expect = 3e-61 Identities = 273/323 (84%) Strand = Plus / Plus Query: 246 ggcggcggcgatggaggcagtggagcgagacgccgccgccatcgccgagagctacgcctc 305 |||||||||||||||||| |||||||| |||| |||||||||| |||| ||||||||||| Sbjct: 197 ggcggcggcgatggaggcggtggagcgggacgtcgccgccatctccgacagctacgcctc 256 Query: 306 cctattcgcctccctccgcatcacgctttccaatgttacctcgacgtcagcggataacat 365 ||| ||||||||||||||| || | || |||| || ||||||||||| ||||| ||||| Sbjct: 257 cctcttcgcctccctccgcgtcgccctcgccaacgtcacctcgacgtcggcggagaacat 316 Query: 366 ggagtgcttgggcgaagttgtaggccgcctccaggagtcagcacttgaagcgtcttctag 425 ||||||| |||| || || || ||||||||||| || || ||||| ||||| ||||| | Sbjct: 317 ggagtgcctgggagacgtcgtcggccgcctccaagaatccgcactcgaagcttcttcgaa 376 Query: 426 agggaataagtacatccattcgtgcctgaggttaaatgaggaaatgcgaggcttggaaag 485 ||| |||||||||||| |||||||| ||||||| |||||||||||| |||| ||||||| Sbjct: 377 aggaaataagtacatcaattcgtgcttgaggttgaatgaggaaatgagaggtctggaaag 436 Query: 486 cctaagtatgcagctaaagatcatgcggaagatcgttgattcactagatttggctgttga 545 |||| ||||| |||||||| | ||||||| |||||||||||||| |||||||| | Sbjct: 437 cctagccatgcaactaaagattttacggaagaatgttgattcactagacttggctgtcaa 496 Query: 546 tcggctgctccacctcccgtagt 568 || | |||||| |||||| |||| Sbjct: 497 tcagttgctccgcctcccctagt 519
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 246 ggcggcggcgatggaggcagtggagcgagacgccgccgccatcgccgagagctacgcctc 305 |||||||||||||||||| |||||||| |||| |||||||||| |||| ||||||||||| Sbjct: 17630668 ggcggcggcgatggaggcggtggagcgggacgtcgccgccatctccgacagctacgcctc 17630727 Query: 306 cctattcgcctccctccgc 324 ||| ||||||||||||||| Sbjct: 17630728 cctcttcgcctccctccgc 17630746 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 343 acctcgacgtcagcggataacatggagtgcttgggcgaagttgtaggccgcctcca 398 ||||||||||| ||||| |||||||||||| |||| || || || ||||||||||| Sbjct: 17630942 acctcgacgtcggcggagaacatggagtgcctgggagacgtcgtcggccgcctcca 17630997 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 404 cagcacttgaagcgtcttctagagggaataagtacatccattcgtgcctgaggt 457 ||||||| ||||| ||||| | ||| |||||||||||| |||||||| |||||| Sbjct: 17631372 cagcactcgaagcttcttcgaaaggaaataagtacatcaattcgtgcttgaggt 17631425 Score = 44.1 bits (22), Expect = 0.57 Identities = 49/58 (84%) Strand = Plus / Plus Query: 511 cggaagatcgttgattcactagatttggctgttgatcggctgctccacctcccgtagt 568 ||||||| |||||||||||||| |||||||| ||| | |||||| |||||| |||| Sbjct: 17631855 cggaagaatgttgattcactagacttggctgtcaatcagttgctccgcctcccctagt 17631912 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 26756309 ggcggcggcggcgatggagg 26756290 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 454 aggttaaatgaggaaatgcgaggcttggaaagccta 489 ||||| |||||||||||| |||| ||||||||||| Sbjct: 17631659 aggttgaatgaggaaatgagaggtctggaaagccta 17631694 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gcaagggaggcggcggcggc 254 |||||||||||||||||||| Sbjct: 10031389 gcaagggaggcggcggcggc 10031370
>dbj|AP005465.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_F08 Length = 134988 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 246 ggcggcggcgatggaggcagtggagcgagacgccgccgccatcgccgagagctacgcctc 305 |||||||||||||||||| |||||||| |||| |||||||||| |||| ||||||||||| Sbjct: 34701 ggcggcggcgatggaggcggtggagcgggacgtcgccgccatctccgacagctacgcctc 34760 Query: 306 cctattcgcctccctccgc 324 ||| ||||||||||||||| Sbjct: 34761 cctcttcgcctccctccgc 34779 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 343 acctcgacgtcagcggataacatggagtgcttgggcgaagttgtaggccgcctcca 398 ||||||||||| ||||| |||||||||||| |||| || || || ||||||||||| Sbjct: 34975 acctcgacgtcggcggagaacatggagtgcctgggagacgtcgtcggccgcctcca 35030 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 404 cagcacttgaagcgtcttctagagggaataagtacatccattcgtgcctgaggt 457 ||||||| ||||| ||||| | ||| |||||||||||| |||||||| |||||| Sbjct: 35405 cagcactcgaagcttcttcgaaaggaaataagtacatcaattcgtgcttgaggt 35458 Score = 44.1 bits (22), Expect = 0.57 Identities = 49/58 (84%) Strand = Plus / Plus Query: 511 cggaagatcgttgattcactagatttggctgttgatcggctgctccacctcccgtagt 568 ||||||| |||||||||||||| |||||||| ||| | |||||| |||||| |||| Sbjct: 35888 cggaagaatgttgattcactagacttggctgtcaatcagttgctccgcctcccctagt 35945 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 454 aggttaaatgaggaaatgcgaggcttggaaagccta 489 ||||| |||||||||||| |||| ||||||||||| Sbjct: 35692 aggttgaatgaggaaatgagaggtctggaaagccta 35727
>dbj|AP005479.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0045A07 Length = 174165 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Plus Query: 246 ggcggcggcgatggaggcagtggagcgagacgccgccgccatcgccgagagctacgcctc 305 |||||||||||||||||| |||||||| |||| |||||||||| |||| ||||||||||| Sbjct: 158617 ggcggcggcgatggaggcggtggagcgggacgtcgccgccatctccgacagctacgcctc 158676 Query: 306 cctattcgcctccctccgc 324 ||| ||||||||||||||| Sbjct: 158677 cctcttcgcctccctccgc 158695 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 343 acctcgacgtcagcggataacatggagtgcttgggcgaagttgtaggccgcctcca 398 ||||||||||| ||||| |||||||||||| |||| || || || ||||||||||| Sbjct: 158891 acctcgacgtcggcggagaacatggagtgcctgggagacgtcgtcggccgcctcca 158946 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 404 cagcacttgaagcgtcttctagagggaataagtacatccattcgtgcctgaggt 457 ||||||| ||||| ||||| | ||| |||||||||||| |||||||| |||||| Sbjct: 159321 cagcactcgaagcttcttcgaaaggaaataagtacatcaattcgtgcttgaggt 159374 Score = 44.1 bits (22), Expect = 0.57 Identities = 49/58 (84%) Strand = Plus / Plus Query: 511 cggaagatcgttgattcactagatttggctgttgatcggctgctccacctcccgtagt 568 ||||||| |||||||||||||| |||||||| ||| | |||||| |||||| |||| Sbjct: 159804 cggaagaatgttgattcactagacttggctgtcaatcagttgctccgcctcccctagt 159861 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 454 aggttaaatgaggaaatgcgaggcttggaaagccta 489 ||||| |||||||||||| |||| ||||||||||| Sbjct: 159608 aggttgaatgaggaaatgagaggtctggaaagccta 159643
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 278 ccgccgccatcgccgagagctacgc 302 ||||||||||||||||||||||||| Sbjct: 2936055 ccgccgccatcgccgagagctacgc 2936079
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 240 ggaggcggcggcggcgatggaggc 263 |||||||||||||||||||||||| Sbjct: 21072637 ggaggcggcggcggcgatggaggc 21072614 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 35316384 ggcggcggcggcgatggagg 35316403 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatgg 259 |||||||||||||||||||| Sbjct: 31693179 ggaggcggcggcggcgatgg 31693198 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatgg 259 |||||||||||||||||||| Sbjct: 11667204 ggaggcggcggcggcgatgg 11667223 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gccgagagctacgcctccct 308 |||||||||||||||||||| Sbjct: 419183 gccgagagctacgcctccct 419164
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 240 ggaggcggcggcggcgatggaggc 263 |||||||||||||||||||||||| Sbjct: 40182 ggaggcggcggcggcgatggaggc 40159
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1014_G12 Length = 158830 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 240 ggaggcggcggcggcgatggaggc 263 |||||||||||||||||||||||| Sbjct: 135839 ggaggcggcggcggcgatggaggc 135816
>dbj|AB112656.1| Oryza sativa (japonica cultivar-group) OsCAX1a mRNA for cation/proton exchanger 1a, complete cds Length = 1895 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatggaggc 263 |||||||||||||||||||||||| Sbjct: 204 ggaggcggcggcggcgatggaggc 227
>dbj|AK100765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119J24, full insert sequence Length = 1962 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatggaggc 263 |||||||||||||||||||||||| Sbjct: 195 ggaggcggcggcggcgatggaggc 218
>ref|NM_197502.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0053C23.9), mRNA Length = 456 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 aagggaggcggcggcggcgatgg 259 ||||||||||||||||||||||| Sbjct: 216 aagggaggcggcggcggcgatgg 194
>gb|AC108501.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1354_D07, complete sequence Length = 156163 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 aagggaggcggcggcggcgatgg 259 ||||||||||||||||||||||| Sbjct: 33559 aagggaggcggcggcggcgatgg 33581
>gb|DQ470474.1| Homo sapiens scaffold attachment factor A2 mRNA, complete cds Length = 3015 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatggagg 262 ||||||||||||||||||||||| Sbjct: 178 ggaggcggcggcggcgatggagg 200
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 241 gaggcggcggcggcgatggaggc 263 ||||||||||||||||||||||| Sbjct: 8700318 gaggcggcggcggcgatggaggc 8700296 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 agggaggcggcggcggcgatggagg 262 ||||||||||||||||||| ||||| Sbjct: 12346559 agggaggcggcggcggcgagggagg 12346535 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gcaagggaggcggcggcggc 254 |||||||||||||||||||| Sbjct: 35907275 gcaagggaggcggcggcggc 35907256
>gb|BC029105.1| Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 2, mRNA (cDNA clone IMAGE:4384978), containing frame-shift errors Length = 1750 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatggagg 262 ||||||||||||||||||||||| Sbjct: 301 ggaggcggcggcggcgatggagg 323
>emb|AL513365.27| Human DNA sequence from clone RP3-476K8 on chromosome 1 Contains the LIN28 gene for lin-28 homolog (C. elegans), the DHDDS gene for dehydrodolichyl diphosphate synthase, a ribosomal protein L17 (RPL17) pseudogene, a novel gene, the HMGN2 gene for high-mobility group nucleosomal binding domain 2 and two CpG islands, complete sequence Length = 107415 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 238 agggaggcggcggcggcgatggaggcagtgg 268 |||||||||||||||||| ||| |||||||| Sbjct: 41653 agggaggcggcggcggcggtggcggcagtgg 41683
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 aagggaggcggcggcggcgatgg 259 ||||||||||||||||||||||| Sbjct: 42369 aagggaggcggcggcggcgatgg 42347
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 aagggaggcggcggcggcgatgg 259 ||||||||||||||||||||||| Sbjct: 1857 aagggaggcggcggcggcgatgg 1879
>dbj|AK122942.1| Homo sapiens cDNA FLJ16651 fis, clone TESTI4036449, highly similar to Mus musculus G protein gamma 3 linked gene Length = 4001 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatggagg 262 ||||||||||||||||||||||| Sbjct: 213 ggaggcggcggcggcgatggagg 235
>ref|XM_938301.1| PREDICTED: Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 2 (HNRPUL2), mRNA Length = 5383 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatggagg 262 ||||||||||||||||||||||| Sbjct: 456 ggaggcggcggcggcgatggagg 478
>ref|XM_495877.2| PREDICTED: Homo sapiens heterogeneous nuclear ribonucleoprotein U-like 2 (HNRPUL2), mRNA Length = 5237 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatggagg 262 ||||||||||||||||||||||| Sbjct: 310 ggaggcggcggcggcgatggagg 332
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02, complete sequence Length = 115270 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 241 gaggcggcggcggcgatggaggc 263 ||||||||||||||||||||||| Sbjct: 43969 gaggcggcggcggcgatggaggc 43947
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 aagggaggcggcggcggcgatgg 259 ||||||||||||||||||||||| Sbjct: 20124122 aagggaggcggcggcggcgatgg 20124144 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 17051508 ggcggcggcggcgatggagg 17051527
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 241 gaggcggcggcggcgatggaggc 263 ||||||||||||||||||||||| Sbjct: 27880894 gaggcggcggcggcgatggaggc 27880872 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 25565789 ggcggcggcggcgatggagg 25565770
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 aagggaggcggcggcggcgatgg 259 ||||||||||||||||||||||| Sbjct: 18393722 aagggaggcggcggcggcgatgg 18393744 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 gccgccgccgctgcaaccggcctcc 51 |||||||||||||| |||||||||| Sbjct: 13882781 gccgccgccgctgctaccggcctcc 13882805 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 1493423 ggcggcggcggcgatggagg 1493404
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 241 gaggcggcggcggcgatggaggc 263 ||||||||||||||||||||||| Sbjct: 8698153 gaggcggcggcggcgatggaggc 8698131 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 agggaggcggcggcggcgatggagg 262 ||||||||||||||||||| ||||| Sbjct: 12343322 agggaggcggcggcggcgagggagg 12343298 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gcaagggaggcggcggcggc 254 |||||||||||||||||||| Sbjct: 35997405 gcaagggaggcggcggcggc 35997386
>ref|XM_219560.3| PREDICTED: Rattus norvegicus similar to hypothetical protein (LOC309197), mRNA Length = 3309 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatggagg 262 ||||||||||||||||||||||| Sbjct: 447 ggaggcggcggcggcgatggagg 469
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710B08 Length = 186991 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 241 gaggcggcggcggcgatggaggc 263 ||||||||||||||||||||||| Sbjct: 183403 gaggcggcggcggcgatggaggc 183381
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0003H08 Length = 142068 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 241 gaggcggcggcggcgatggaggc 263 ||||||||||||||||||||||| Sbjct: 34817 gaggcggcggcggcgatggaggc 34795
>dbj|AK107197.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-A10, full insert sequence Length = 1919 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 241 gaggcggcggcggcgatggaggc 263 ||||||||||||||||||||||| Sbjct: 46 gaggcggcggcggcgatggaggc 24
>emb|AJ334750.1|HSA334750 Homo sapiens genomic sequence surrounding NotI site, clone NL1-CP5R Length = 675 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 238 agggaggcggcggcggcgatggaggcagtgg 268 |||||||||||||||||| ||| |||||||| Sbjct: 149 agggaggcggcggcggcggtggcggcagtgg 179
>dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831H9, complete sequence Length = 177433 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 240 ggaggcggcggcggcgatggagg 262 ||||||||||||||||||||||| Sbjct: 134439 ggaggcggcggcggcgatggagg 134417
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 237 aagggaggcggcggcggcgatgg 259 ||||||||||||||||||||||| Sbjct: 20135398 aagggaggcggcggcggcgatgg 20135420 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 17060548 ggcggcggcggcgatggagg 17060567
>emb|X13546.1|HSHMG17G Human HMG-17 gene for non-histone chromosomal protein HMG-17 Length = 7195 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 238 agggaggcggcggcggcgatggaggcagtgg 268 |||||||||||||||||| ||| |||||||| Sbjct: 2587 agggaggcggcggcggcggtggcggcagtgg 2557
>dbj|AP001160.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-727F15, complete sequences Length = 184802 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 240 ggaggcggcggcggcgatggagg 262 ||||||||||||||||||||||| Sbjct: 4473 ggaggcggcggcggcgatggagg 4451
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 gccgccgccgctgcaaccggcc 48 |||||||||||||||||||||| Sbjct: 1882113 gccgccgccgctgcaaccggcc 1882092
>ref|XM_963416.1| PREDICTED: Tribolium castaneum similar to CG18214-PA, isoform A (LOC656919), mRNA Length = 4836 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 238 agggaggcggcggcggcgatggaggc 263 |||||||||||||||||| ||||||| Sbjct: 710 agggaggcggcggcggcggtggaggc 735
>gb|BT017867.1| Zea mays clone EL01N0512B08.c mRNA sequence Length = 1377 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 21 ttcctagccgccgccgctgcaaccg 45 |||||||||||||||||||| |||| Sbjct: 970 ttcctagccgccgccgctgccaccg 946
>gb|AC148393.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0044A08 map near S6115, complete sequence Length = 158583 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 240 ggaggcggcggcggcgatggaggcagtgg 268 ||||||||||||||| |||| |||||||| Sbjct: 39075 ggaggcggcggcggccatggcggcagtgg 39047
>gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062O09 map near S6115, complete sequence Length = 148654 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 240 ggaggcggcggcggcgatggaggcagtgg 268 ||||||||||||||| |||| |||||||| Sbjct: 132778 ggaggcggcggcggccatggcggcagtgg 132750
>ref|XM_955854.1| Neurospora crassa OR74A hypothetical protein (NCU01390.1) partial mRNA Length = 975 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 cctcctcctcgctcaatcccc 139 ||||||||||||||||||||| Sbjct: 622 cctcctcctcgctcaatcccc 602
>ref|XM_326882.1| Neurospora crassa OR74A hypothetical protein (NCU01390.1) partial mRNA Length = 975 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 cctcctcctcgctcaatcccc 139 ||||||||||||||||||||| Sbjct: 622 cctcctcctcgctcaatcccc 602
>gb|AC135430.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0671E09, complete sequence Length = 158472 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 gccgccgccgctgcaaccggcctcc 51 |||||||||||||| |||||||||| Sbjct: 100283 gccgccgccgctgctaccggcctcc 100307
>ref|XM_542808.2| PREDICTED: Canis familiaris similar to forkhead box L2 (LOC485688), mRNA Length = 1749 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 235 gcaagggaggcggcggcggcg 255 ||||||||||||||||||||| Sbjct: 950 gcaagggaggcggcggcggcg 970
>ref|XM_804006.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511865.30) partial mRNA Length = 1803 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 gaggcggcggcggcgatggag 261 ||||||||||||||||||||| Sbjct: 1345 gaggcggcggcggcgatggag 1365
>ref|XM_809670.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511871.70) partial mRNA Length = 1803 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 gaggcggcggcggcgatggag 261 ||||||||||||||||||||| Sbjct: 1345 gaggcggcggcggcgatggag 1365
>gb|AC120496.2| Genomic sequence for Sorghum bicolor, clone SBBBc0267M07, complete sequence Length = 120132 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 27 gccgccgccgctgcaaccggcctcc 51 ||||||||||||||| ||||||||| Sbjct: 37333 gccgccgccgctgcatccggcctcc 37357 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gcggcggcggcgatggaggc 263 |||||||||||||||||||| Sbjct: 64791 gcggcggcggcgatggaggc 64810
>emb|BX294017.1|NCB7O17 Neurospora crassa DNA linkage group V BAC clone B7O17 Length = 26447 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 cctcctcctcgctcaatcccc 139 ||||||||||||||||||||| Sbjct: 14391 cctcctcctcgctcaatcccc 14371
>gb|AC125496.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0098H14, complete sequence Length = 132560 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 agggaggcggcggcggcgatggagg 262 ||||||||||||||||||| ||||| Sbjct: 5577 agggaggcggcggcggcgagggagg 5553
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 gaggcggcggcggcgatggag 261 ||||||||||||||||||||| Sbjct: 3076030 gaggcggcggcggcgatggag 3076050
>gb|AC159612.1| Zea mays chromosome 5S clone ZMMBBb0511I12 map bin: 5.00, complete sequence Length = 50000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 gcaagggaggcggcggcggcg 255 ||||||||||||||||||||| Sbjct: 15758 gcaagggaggcggcggcggcg 15738
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatggaggcagtgg 268 ||||||||||||||| |||| |||||||| Sbjct: 12507057 ggaggcggcggcggccatggcggcagtgg 12507085 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cgccgccgccatcgccgaga 295 |||||||||||||||||||| Sbjct: 179889 cgccgccgccatcgccgaga 179870
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 gggaggcggcggcggcgatgg 259 ||||||||||||||||||||| Sbjct: 21011904 gggaggcggcggcggcgatgg 21011924 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 gacgccgccgccatcgccgagagc 297 ||||||||||||||||||| |||| Sbjct: 19095598 gacgccgccgccatcgccgcgagc 19095621
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 238 agggaggcggcggcggcgatggagg 262 ||||||||||||||||||| ||||| Sbjct: 116092 agggaggcggcggcggcgagggagg 116068
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 gggaggcggcggcggcgatgg 259 ||||||||||||||||||||| Sbjct: 103993 gggaggcggcggcggcgatgg 104013
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 gggaggcggcggcggcgatgg 259 ||||||||||||||||||||| Sbjct: 33204 gggaggcggcggcggcgatgg 33224
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatggaggcagtgg 268 ||||||||||||||| |||| |||||||| Sbjct: 12586364 ggaggcggcggcggccatggcggcagtgg 12586392 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cgccgccgccatcgccgaga 295 |||||||||||||||||||| Sbjct: 179889 cgccgccgccatcgccgaga 179870
>gb|AF051353.1| Acanthamoeba castellanii myosin IC heavy chain (MICHC) mRNA, complete cds Length = 3561 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 caagggaggcggcggcggcg 255 |||||||||||||||||||| Sbjct: 2826 caagggaggcggcggcggcg 2845
>gb|BC012490.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone IMAGE:3447569), with apparent retained intron Length = 671 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 14 ggcggcggcggcggtggaggcagt 37
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 268 gagcgagacgccgccgccatcgccgaga 295 ||||| ||||||||| |||||||||||| Sbjct: 1777397 gagcgcgacgccgccaccatcgccgaga 1777424
>ref|XM_549856.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2381 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gccgagagctacgcctccct 308 |||||||||||||||||||| Sbjct: 315 gccgagagctacgcctccct 334
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 cccggcgccagaggaagcct 157 |||||||||||||||||||| Sbjct: 196964 cccggcgccagaggaagcct 196945
>ref|XM_472466.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 387 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 141 ggcggcggcggcgatggagg 160
>ref|NM_183692.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 525 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ggaggcggcggcggcgatgg 259 |||||||||||||||||||| Sbjct: 197 ggaggcggcggcggcgatgg 178
>ref|NM_190405.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1377 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 36 ggcggcggcggcgatggagg 17
>ref|NM_191277.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1293 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatgg 259 |||||||||||||||||||| Sbjct: 232 ggaggcggcggcggcgatgg 251
>ref|XM_470490.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1386 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gcaagggaggcggcggcggc 254 |||||||||||||||||||| Sbjct: 338 gcaagggaggcggcggcggc 357
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 gacgccgccgccatcgccgagagc 297 ||||||||||||||||||| |||| Sbjct: 140884 gacgccgccgccatcgccgcgagc 140907
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 274 gacgccgccgccatcgccgagagc 297 ||||||||||||||||||| |||| Sbjct: 25558 gacgccgccgccatcgccgcgagc 25581
>gb|BC007271.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:15589 IMAGE:3160840), complete cds Length = 1479 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 826 ggcggcggcggcggtggaggcagt 849
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence Length = 168746 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 cctagccgccgccgctgcaa 42 |||||||||||||||||||| Sbjct: 86283 cctagccgccgccgctgcaa 86264
>gb|BC001008.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:8694 IMAGE:2964662), complete cds Length = 1750 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1097 ggcggcggcggcggtggaggcagt 1120
>gb|AY731567.1| Arachis hypogaea clone PM413 microsatellite sequence Length = 550 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 245 cggcggcggcgatggaggcagtgg 268 ||||||||||||||| |||||||| Sbjct: 346 cggcggcggcgatggtggcagtgg 369
>ref|XM_363937.1| Magnaporthe grisea 70-15 hypothetical protein (MG01863.4) partial mRNA Length = 1536 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 27 ggcggcggcggcgatggagg 8
>gb|BC028976.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:30185 IMAGE:4993025), complete cds Length = 1749 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1098 ggcggcggcggcggtggaggcagt 1121
>gb|BC012980.2| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:16084 IMAGE:3617551), complete cds Length = 1751 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1097 ggcggcggcggcggtggaggcagt 1120
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 acgccgccgccatcgccgag 294 |||||||||||||||||||| Sbjct: 676005 acgccgccgccatcgccgag 675986
>ref|NM_006805.3| Homo sapiens heterogeneous nuclear ribonucleoprotein A0 (HNRPA0), mRNA Length = 2983 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1098 ggcggcggcggcggtggaggcagt 1121
>gb|BC030249.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:40050 IMAGE:5242912), complete cds Length = 1799 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1098 ggcggcggcggcggtggaggcagt 1121
>ref|XM_533261.2| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein U (LOC476053), mRNA Length = 3318 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 528 ggcggcggcggcgatggagg 547
>ref|XM_846583.1| PREDICTED: Canis familiaris similar to leiomodin 3 (fetal) (LOC609334), mRNA Length = 1512 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 cgccgccgccatcgccgaga 295 |||||||||||||||||||| Sbjct: 936 cgccgccgccatcgccgaga 955
>ref|XM_850706.1| PREDICTED: Canis familiaris similar to tripartite motif-containing 41 isform 1, transcript variant 2 (LOC491669), mRNA Length = 1012 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ggaggcggcggcggcgatgg 259 |||||||||||||||||||| Sbjct: 731 ggaggcggcggcggcgatgg 712
>ref|XM_548790.2| PREDICTED: Canis familiaris similar to tripartite motif-containing 41 isform 1, transcript variant 1 (LOC491669), mRNA Length = 1890 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ggaggcggcggcggcgatgg 259 |||||||||||||||||||| Sbjct: 1609 ggaggcggcggcggcgatgg 1590
>gb|AC122485.3| Mus musculus BAC clone RP24-377J10 from chromosome 3, complete sequence Length = 157739 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 603 gcatttgaagaggcaatcaa 622 |||||||||||||||||||| Sbjct: 65628 gcatttgaagaggcaatcaa 65609
>gb|AY957398.1| Sorghum bicolor RAMOSA1 C2H2 zinc-finger transcription factor (ramosa1) gene, complete cds Length = 6017 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 244 gcggcggcggcgatggaggc 263 |||||||||||||||||||| Sbjct: 3649 gcggcggcggcgatggaggc 3668
>gb|BT009752.1| Synthetic construct Homo sapiens heterogeneous nuclear ribonucleoprotein A0 mRNA, partial cds Length = 918 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 814 ggcggcggcggcggtggaggcagt 837
>ref|XM_971298.1| PREDICTED: Tribolium castaneum hypothetical protein LOC661532 (LOC661532), mRNA Length = 702 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatggaggc 263 |||||||||||||||| ||||||| Sbjct: 619 ggaggcggcggcggcggtggaggc 642
>emb|CR456986.1| Homo sapiens full open reading frame cDNA clone RZPDo834D055D for gene HNRPA0, heterogeneous nuclear ribonucleoprotein A0; complete cds, incl. stopcodon Length = 918 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 814 ggcggcggcggcggtggaggcagt 837
>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23, complete sequence Length = 148736 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 54547 ggcggcggcggcgatggagg 54528
>emb|CR625209.1| full-length cDNA clone CS0DI083YH21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1568 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 944 ggcggcggcggcggtggaggcagt 967
>emb|CR625176.1| full-length cDNA clone CS0DI013YF04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1542 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 944 ggcggcggcggcggtggaggcagt 967
>emb|CR619753.1| full-length cDNA clone CS0DG001YK14 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1668 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1034 ggcggcggcggcggtggaggcagt 1057
>emb|CR618572.1| full-length cDNA clone CS0DL009YG24 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1704 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1097 ggcggcggcggcggtggaggcagt 1120
>emb|CR617807.1| full-length cDNA clone CS0DF032YP14 of Fetal brain of Homo sapiens (human) Length = 1366 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 755 ggcggcggcggcggtggaggcagt 778
>emb|CR614845.1| full-length cDNA clone CS0DF033YM18 of Fetal brain of Homo sapiens (human) Length = 1694 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1093 ggcggcggcggcggtggaggcagt 1116
>emb|CR614650.1| full-length cDNA clone CS0DI060YF24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1702 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1097 ggcggcggcggcggtggaggcagt 1120
>emb|CR611804.1| full-length cDNA clone CS0DA004YK20 of Neuroblastoma of Homo sapiens (human) Length = 1712 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1089 ggcggcggcggcggtggaggcagt 1112
>emb|CR608808.1| full-length cDNA clone CL0BB019ZH05 of Neuroblastoma of Homo sapiens (human) Length = 895 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 300 ggcggcggcggcggtggaggcagt 323
>emb|CR608582.1| full-length cDNA clone CS0DI071YA22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1541 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 945 ggcggcggcggcggtggaggcagt 968
>emb|CR607296.1| full-length cDNA clone CS0DJ014YI03 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1686 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1082 ggcggcggcggcggtggaggcagt 1105
>emb|CR607265.1| full-length cDNA clone CS0DA011YG20 of Neuroblastoma of Homo sapiens (human) Length = 1717 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1097 ggcggcggcggcggtggaggcagt 1120
>emb|CR607192.1| full-length cDNA clone CS0DE011YN03 of Placenta of Homo sapiens (human) Length = 1692 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1075 ggcggcggcggcggtggaggcagt 1098
>emb|CR605629.1| full-length cDNA clone CS0DI033YH20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1700 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1093 ggcggcggcggcggtggaggcagt 1116
>emb|CR604783.1| full-length cDNA clone CS0DF005YK06 of Fetal brain of Homo sapiens (human) Length = 1715 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1093 ggcggcggcggcggtggaggcagt 1116
>emb|CR599659.1| full-length cDNA clone CS0DI063YA10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1711 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1100 ggcggcggcggcggtggaggcagt 1123
>emb|CR598679.1| full-length cDNA clone CS0DI081YL24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1704 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1094 ggcggcggcggcggtggaggcagt 1117
>emb|CR596658.1| full-length cDNA clone CS0DE003YG02 of Placenta of Homo sapiens (human) Length = 1322 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 700 ggcggcggcggcggtggaggcagt 723
>gb|AE011631.1| Xanthomonas axonopodis pv. citri str. 306, section 9 of 469 of the complete genome Length = 11483 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 gggcgaagttgtaggccgcc 394 |||||||||||||||||||| Sbjct: 8460 gggcgaagttgtaggccgcc 8441
>emb|CR592858.1| full-length cDNA clone CS0DI070YK05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1720 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1097 ggcggcggcggcggtggaggcagt 1120
>emb|CR592616.1| full-length cDNA clone CS0DC026YA04 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1698 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1097 ggcggcggcggcggtggaggcagt 1120
>emb|CR592229.1| full-length cDNA clone CS0DI023YE14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1678 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1097 ggcggcggcggcggtggaggcagt 1120
>gb|AE012099.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 7 of 460 of the complete genome Length = 10647 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 gggcgaagttgtaggccgcc 394 |||||||||||||||||||| Sbjct: 8295 gggcgaagttgtaggccgcc 8276
>gb|AC106791.4| Homo sapiens chromosome 5 clone RP11-381K20, complete sequence Length = 216877 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 163453 ggcggcggcggcggtggaggcagt 163476
>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete sequence Length = 144724 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 140828 ggcggcggcggcgatggagg 140809
>gb|BC019271.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:3519 IMAGE:2823669), complete cds Length = 1733 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1077 ggcggcggcggcggtggaggcagt 1100
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete sequence Length = 145115 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 gcaagggaggcggcggcggc 254 |||||||||||||||||||| Sbjct: 53850 gcaagggaggcggcggcggc 53869
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 gggcgaagttgtaggccgcc 394 |||||||||||||||||||| Sbjct: 73142 gggcgaagttgtaggccgcc 73123
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 20807822 ggcggcggcggcgatggagg 20807803
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 25137232 ggcggcggcggcgatggagg 25137213
>gb|U75930.2|OPU75930 Orgyia pseudotsugata multicapsid nucleopolyhedrovirus, complete genome Length = 131995 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 gacgccgccgccatcgccga 293 |||||||||||||||||||| Sbjct: 75356 gacgccgccgccatcgccga 75337
>dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0503C12 Length = 147180 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatgg 259 |||||||||||||||||||| Sbjct: 106911 ggaggcggcggcggcgatgg 106930
>gb|AC069145.5|AC069145 Oryza sativa chromosome 10 BAC OSJNBb0094K03 genomic sequence, complete sequence Length = 135216 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 92000 ggcggcggcggcgatggagg 92019
>gb|AE004730.1| Pseudomonas aeruginosa PAO1, section 291 of 529 of the complete genome Length = 20021 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 gacgccgccgccatcgccga 293 |||||||||||||||||||| Sbjct: 19439 gacgccgccgccatcgccga 19420
>gb|AC091759.2| Sus scrofa clone RP44-484M10, complete sequence Length = 168703 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 cgcctccaggagtcagcact 410 |||||||||||||||||||| Sbjct: 133106 cgcctccaggagtcagcact 133087
>dbj|AP003315.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439E11 Length = 146083 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 80245 ggcggcggcggcgatggagg 80264
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ccgccgccatcgccgagagc 297 |||||||||||||||||||| Sbjct: 8342829 ccgccgccatcgccgagagc 8342810
>dbj|AP003934.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0551A11 Length = 132384 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatgg 259 |||||||||||||||||||| Sbjct: 106328 ggaggcggcggcggcgatgg 106347
>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0005A05 Length = 190834 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gccgagagctacgcctccct 308 |||||||||||||||||||| Sbjct: 171021 gccgagagctacgcctccct 171002
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gccgagagctacgcctccct 308 |||||||||||||||||||| Sbjct: 59384 gccgagagctacgcctccct 59365
>dbj|AP003722.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1011A07 Length = 150590 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatgg 259 |||||||||||||||||||| Sbjct: 6372 ggaggcggcggcggcgatgg 6391
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 84106 ggcggcggcggcgatggagg 84087
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 103166 ggcggcggcggcgatggagg 103147
>dbj|AP005172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0002J01 Length = 130152 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gcaagggaggcggcggcggc 254 |||||||||||||||||||| Sbjct: 4065 gcaagggaggcggcggcggc 4046
>dbj|AP003832.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1458_B07 Length = 99415 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 2483 ggcggcggcggcgatggagg 2464
>gb|AY892769.1| Synthetic construct Homo sapiens clone FLH024698.01L heterogeneous nuclear ribonucleoprotein A0 (HNRPA0) mRNA, partial cds Length = 918 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 814 ggcggcggcggcggtggaggcagt 837
>dbj|AK121898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105F09, full insert sequence Length = 1972 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 92 ggcggcggcggcgatggagg 73
>dbj|AK120294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051A05, full insert sequence Length = 3443 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 1541 ggcggcggcggcgatggagg 1560
>dbj|AK070648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B16, full insert sequence Length = 2047 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 250 ggcggcggcggcgatggagg 269
>dbj|AK070363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F20, full insert sequence Length = 2381 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gccgagagctacgcctccct 308 |||||||||||||||||||| Sbjct: 315 gccgagagctacgcctccct 334
>gb|AC149318.2| Phakopsora pachyrhizi clone JGIAFNA-101K16, complete sequence Length = 38351 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 aagggaggcggcggcggcga 256 |||||||||||||||||||| Sbjct: 14091 aagggaggcggcggcggcga 14072
>gb|BC011972.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:17503 IMAGE:3454140), complete cds Length = 1735 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1089 ggcggcggcggcggtggaggcagt 1112
>dbj|AK058570.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-E07, full insert sequence Length = 1609 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatgg 259 |||||||||||||||||||| Sbjct: 404 ggaggcggcggcggcgatgg 423
>dbj|AP003797.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1001_C01 Length = 90750 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 gcaagggaggcggcggcggc 254 |||||||||||||||||||| Sbjct: 63038 gcaagggaggcggcggcggc 63019
>dbj|D13755.1|NPORPT2 Orgyia pseudotsugata multicapsid nuclear polyhedrosis virus DNA, repetitive GC-rich region, from the SstI I fragment Length = 749 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 274 gacgccgccgccatcgccga 293 |||||||||||||||||||| Sbjct: 186 gacgccgccgccatcgccga 167
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 617 aatcaagtactgtaaatctt 636 |||||||||||||||||||| Sbjct: 3212856 aatcaagtactgtaaatctt 3212875
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 25065408 ggcggcggcggcgatggagg 25065389
>emb|AL731743.2|CNS08C7S Oryza sativa chromosome 12, . BAC OSJNBa0001B02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 93872 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 63831 ggcggcggcggcgatggagg 63850
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 cgccgccgccatcgccgaga 295 |||||||||||||||||||| Sbjct: 125104 cgccgccgccatcgccgaga 125123
>gb|BC018800.1| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone IMAGE:3605889) Length = 1753 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1095 ggcggcggcggcggtggaggcagt 1118
>gb|BC018949.2| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:16754 IMAGE:4131137), complete cds Length = 1926 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1097 ggcggcggcggcggtggaggcagt 1120
>gb|BC009284.2| Homo sapiens heterogeneous nuclear ribonucleoprotein A0, mRNA (cDNA clone MGC:14361 IMAGE:4299262), complete cds Length = 1052 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 870 ggcggcggcggcggtggaggcagt 893
>gb|AY860423.1| Gonium pectorale albino3-like protein (ALB3-1) gene, complete cds Length = 4644 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 ggcggcggcgatggaggcag 265 |||||||||||||||||||| Sbjct: 4123 ggcggcggcgatggaggcag 4142
>emb|AL592224.17| Mouse DNA sequence from clone RP23-174G1 on chromosome 1, complete sequence Length = 217775 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 cctgaggttaaatgaggaaa 469 |||||||||||||||||||| Sbjct: 94112 cctgaggttaaatgaggaaa 94093
>gb|U23803.1|HSU23803 Human heterogeneous ribonucleoprotein A0 mRNA, complete cds Length = 1714 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 1078 ggcggcggcggcggtggaggcagt 1101
>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12, complete sequence Length = 144455 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 ggcggcggcggcgatggagg 262 |||||||||||||||||||| Sbjct: 87503 ggcggcggcggcgatggagg 87484
>gb|L10372.1|HUMMRNAA Human (clone CCG-A3) mRNA sequence Length = 850 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 ggcggcggcggcgatggaggcagt 266 ||||||||||||| |||||||||| Sbjct: 501 ggcggcggcggcggtggaggcagt 524
>gb|J02974.1|ACAMYHCIB Myosin IB heavy chain gene, complete cds Length = 6504 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 236 caagggaggcggcggcggcg 255 |||||||||||||||||||| Sbjct: 5326 caagggaggcggcggcggcg 5345
>dbj|AB071807.1| Oryza sativa (japonica cultivar-group) mRNA for transcription factor PCF7, partial cds Length = 1674 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 ggaggcggcggcggcgatgg 259 |||||||||||||||||||| Sbjct: 271 ggaggcggcggcggcgatgg 290 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,355,833 Number of Sequences: 3902068 Number of extensions: 5355833 Number of successful extensions: 164567 Number of sequences better than 10.0: 159 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 156637 Number of HSP's gapped (non-prelim): 7930 length of query: 649 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 626 effective length of database: 17,143,297,704 effective search space: 10731704362704 effective search space used: 10731704362704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
