ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal39k06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034C23, full insert sequence Length = 1865 Score = 603 bits (304), Expect = e-169 Identities = 499/564 (88%) Strand = Plus / Plus Query: 2 gcgcaagcagttccccgaggagcgcatctggatcaccaacgagatcatccacaaccccac 61 |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||| Sbjct: 495 gcgcaagcagttccccgacgatcgcatctggctcaccaacgagatcatccacaaccccac 554 Query: 62 ggtcaacaagaaattggaggacatgggtgtcaaagatattcctgttaacgctggtattaa 121 ||||||||| ||||||||||||||| ||| || | ||||||||| | || |||||||| Sbjct: 555 cgtcaacaagcgattggaggacatgggcgtccaaaacattcctgttgatgcaggtattaa 614 Query: 122 ggattttgatgttattgaacaaggtgatgttgttgtcttgcctgcatttggagctgctgt 181 |||||| |||||| | || ||||| |||||||| || ||||||||||||||||| || || Sbjct: 615 ggatttcgatgttgtcgagcaaggggatgttgtcgtattgcctgcatttggagcggccgt 674 Query: 182 ggatgagatgtacacgctaaatcagaagaacgtgcaaattgttgatacgacatgcccttg 241 ||| |||||||||||||| ||| ||||||| ||||| || || ||||| || |||||||| Sbjct: 675 ggaggagatgtacacgctgaatgagaagaaggtgcagatagtcgatacaacgtgcccttg 734 Query: 242 ggtttcaaaggtgtggaacatggttgagaagcataagaagggcgactatacttctattat 301 ||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 735 ggtttcaaaggtgtggaacatggttgaaaagcacaagaagggtgactacacttctattat 794 Query: 302 tcatggaaagtatgcccatgaagagactgttgccactgcttcttttgctgggaagtacat 361 ||||||||| || |||||||||| ||||||||||||||||| ||||| |||| ||||| Sbjct: 795 tcatggaaaatactcccatgaagaaactgttgccactgcttcctttgcagggacatacat 854 Query: 362 tattgtgaagaatatggtcgaggcaacatatgtatgtgattatatacttggtggccaact 421 ||||| ||||| || | ||||| | |||||||||||||||||||||||||||||||| Sbjct: 855 cattgttaagaacatagcagaggctagctatgtatgtgattatatacttggtggccaact 914 Query: 422 tgatgggtctagcgcaactagagaggagttccttgagaaattcaaaaaggctgtttctcc 481 |||||| |||||| | || | ||||||||||||||||||||||||||| ||||||||||| Sbjct: 915 tgatggttctagctccacaaaagaggagttccttgagaaattcaaaaatgctgtttctcc 974 Query: 482 aggattcgatcctgatgttgacttggaaaaggtgggcattgcaaatcaaacaacaatgct 541 |||||| ||||||||||||||||| | || || |||||||| ||||||||||||||||| Sbjct: 975 aggatttgatcctgatgttgacttagtgaaagttggcattgccaatcaaacaacaatgct 1034 Query: 542 taaaggagaaactgaagaaattgg 565 |||||||||||||||||||||||| Sbjct: 1035 taaaggagaaactgaagaaattgg 1058
>dbj|AK064873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000J09, full insert sequence Length = 1738 Score = 603 bits (304), Expect = e-169 Identities = 499/564 (88%) Strand = Plus / Plus Query: 2 gcgcaagcagttccccgaggagcgcatctggatcaccaacgagatcatccacaaccccac 61 |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||| Sbjct: 479 gcgcaagcagttccccgacgatcgcatctggctcaccaacgagatcatccacaaccccac 538 Query: 62 ggtcaacaagaaattggaggacatgggtgtcaaagatattcctgttaacgctggtattaa 121 ||||||||| ||||||||||||||| ||| || | ||||||||| | || |||||||| Sbjct: 539 cgtcaacaagcgattggaggacatgggcgtccaaaacattcctgttgatgcaggtattaa 598 Query: 122 ggattttgatgttattgaacaaggtgatgttgttgtcttgcctgcatttggagctgctgt 181 |||||| |||||| | || ||||| |||||||| || ||||||||||||||||| || || Sbjct: 599 ggatttcgatgttgtcgagcaaggggatgttgtcgtattgcctgcatttggagcggccgt 658 Query: 182 ggatgagatgtacacgctaaatcagaagaacgtgcaaattgttgatacgacatgcccttg 241 ||| |||||||||||||| ||| ||||||| ||||| || || ||||| || |||||||| Sbjct: 659 ggaggagatgtacacgctgaatgagaagaaggtgcagatagtcgatacaacgtgcccttg 718 Query: 242 ggtttcaaaggtgtggaacatggttgagaagcataagaagggcgactatacttctattat 301 ||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 719 ggtttcaaaggtgtggaacatggttgaaaagcacaagaagggtgactacacttctattat 778 Query: 302 tcatggaaagtatgcccatgaagagactgttgccactgcttcttttgctgggaagtacat 361 ||||||||| || |||||||||| ||||||||||||||||| ||||| |||| ||||| Sbjct: 779 tcatggaaaatactcccatgaagaaactgttgccactgcttcctttgcagggacatacat 838 Query: 362 tattgtgaagaatatggtcgaggcaacatatgtatgtgattatatacttggtggccaact 421 ||||| ||||| || | ||||| | |||||||||||||||||||||||||||||||| Sbjct: 839 cattgttaagaacatagcagaggctagctatgtatgtgattatatacttggtggccaact 898 Query: 422 tgatgggtctagcgcaactagagaggagttccttgagaaattcaaaaaggctgtttctcc 481 |||||| |||||| | || | ||||||||||||||||||||||||||| ||||||||||| Sbjct: 899 tgatggttctagctccacaaaagaggagttccttgagaaattcaaaaatgctgtttctcc 958 Query: 482 aggattcgatcctgatgttgacttggaaaaggtgggcattgcaaatcaaacaacaatgct 541 |||||| ||||||||||||||||| | || || |||||||| ||||||||||||||||| Sbjct: 959 aggatttgatcctgatgttgacttagtgaaagttggcattgccaatcaaacaacaatgct 1018 Query: 542 taaaggagaaactgaagaaattgg 565 |||||||||||||||||||||||| Sbjct: 1019 taaaggagaaactgaagaaattgg 1042
>dbj|AK062113.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B12, full insert sequence Length = 1852 Score = 603 bits (304), Expect = e-169 Identities = 499/564 (88%) Strand = Plus / Plus Query: 2 gcgcaagcagttccccgaggagcgcatctggatcaccaacgagatcatccacaaccccac 61 |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||| Sbjct: 456 gcgcaagcagttccccgacgatcgcatctggctcaccaacgagatcatccacaaccccac 515 Query: 62 ggtcaacaagaaattggaggacatgggtgtcaaagatattcctgttaacgctggtattaa 121 ||||||||| ||||||||||||||| ||| || | ||||||||| | || |||||||| Sbjct: 516 cgtcaacaagcgattggaggacatgggcgtccaaaacattcctgttgatgcaggtattaa 575 Query: 122 ggattttgatgttattgaacaaggtgatgttgttgtcttgcctgcatttggagctgctgt 181 |||||| |||||| | || ||||| |||||||| || ||||||||||||||||| || || Sbjct: 576 ggatttcgatgttgtcgagcaaggggatgttgtcgtattgcctgcatttggagcggccgt 635 Query: 182 ggatgagatgtacacgctaaatcagaagaacgtgcaaattgttgatacgacatgcccttg 241 ||| |||||||||||||| ||| ||||||| ||||| || || ||||| || |||||||| Sbjct: 636 ggaggagatgtacacgctgaatgagaagaaggtgcagatagtcgatacaacgtgcccttg 695 Query: 242 ggtttcaaaggtgtggaacatggttgagaagcataagaagggcgactatacttctattat 301 ||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 696 ggtttcaaaggtgtggaacatggttgaaaagcacaagaagggtgactacacttctattat 755 Query: 302 tcatggaaagtatgcccatgaagagactgttgccactgcttcttttgctgggaagtacat 361 ||||||||| || |||||||||| ||||||||||||||||| ||||| |||| ||||| Sbjct: 756 tcatggaaaatactcccatgaagaaactgttgccactgcttcctttgcagggacatacat 815 Query: 362 tattgtgaagaatatggtcgaggcaacatatgtatgtgattatatacttggtggccaact 421 ||||| ||||| || | ||||| | |||||||||||||||||||||||||||||||| Sbjct: 816 cattgttaagaacatagcagaggctagctatgtatgtgattatatacttggtggccaact 875 Query: 422 tgatgggtctagcgcaactagagaggagttccttgagaaattcaaaaaggctgtttctcc 481 |||||| |||||| | || | ||||||||||||||||||||||||||| ||||||||||| Sbjct: 876 tgatggttctagctccacaaaagaggagttccttgagaaattcaaaaatgctgtttctcc 935 Query: 482 aggattcgatcctgatgttgacttggaaaaggtgggcattgcaaatcaaacaacaatgct 541 |||||| ||||||||||||||||| | || || |||||||| ||||||||||||||||| Sbjct: 936 aggatttgatcctgatgttgacttagtgaaagttggcattgccaatcaaacaacaatgct 995 Query: 542 taaaggagaaactgaagaaattgg 565 |||||||||||||||||||||||| Sbjct: 996 taaaggagaaactgaagaaattgg 1019
>gb|AY104067.1| Zea mays PCO067553 mRNA sequence Length = 839 Score = 490 bits (247), Expect = e-135 Identities = 361/399 (90%) Strand = Plus / Plus Query: 167 atttggagctgctgtggatgagatgtacacgctaaatcagaagaacgtgcaaattgttga 226 |||||||||||||||||| || ||||||||||||||| ||||||| ||||| |||||||| Sbjct: 2 atttggagctgctgtggaggaaatgtacacgctaaatgagaagaaggtgcagattgttga 61 Query: 227 tacgacatgcccttgggtttcaaaggtgtggaacatggttgagaagcataagaagggcga 286 ||||||||||||||||||||||||||| ||||| ||||| || || || |||||| | || Sbjct: 62 tacgacatgcccttgggtttcaaaggtctggaatatggtcgaaaaacacaagaagagtga 121 Query: 287 ctatacttctattattcatggaaagtatgcccatgaagagactgttgccactgcttcttt 346 |||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 122 atatacttcaattattcatggaaagtattcccatgaagaaactgttgccactgcttcttt 181 Query: 347 tgctgggaagtacattattgtgaagaatatggtcgaggcaacatatgtatgtgattatat 406 ||| || |||||||| |||||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 182 tgcaggaaagtacatcattgtgaagaatatggcagaggcaacctatgtgtgtgattatat 241 Query: 407 acttggtggccaacttgatgggtctagcgcaactagagaggagttccttgagaaattcaa 466 |||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||| Sbjct: 242 acttggtggccaacttgatgggtctagctcaacaaaagaggagttccttgagaaattcaa 301 Query: 467 aaaggctgtttctccaggattcgatcctgatgttgacttggaaaaggtgggcattgcaaa 526 || |||||||||||||| || |||||||||||| | | || | |||||| |||||||| Sbjct: 302 gaaagctgtttctccagggtttgatcctgatgttcatcttgatatggtgggaattgcaaa 361 Query: 527 tcaaacaacaatgcttaaaggagaaactgaagaaattgg 565 ||||||||||||||||||||||||||||||||||||||| Sbjct: 362 tcaaacaacaatgcttaaaggagaaactgaagaaattgg 400
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Plus Query: 74 attggaggacatgggtgtcaaagatattcctgttaacgctggtattaaggattttgatgt 133 ||||||||||||||| ||| || | ||||||||| | || |||||||||||||| ||||| Sbjct: 110840 attggaggacatgggcgtccaaaacattcctgttgatgcaggtattaaggatttcgatgt 110899 Query: 134 tattgaacaaggtgatgttgttgtcttgcctgcatttggagctgctgtggatgagatgta 193 | | || ||||| |||||||| || ||||||||||||||||| || ||||| |||||||| Sbjct: 110900 tgtcgagcaaggggatgttgtcgtattgcctgcatttggagcggccgtggaggagatgta 110959 Query: 194 cacgctaaatcagaagaacgtgcaaattgttgatacgacatgcccttgggtttcaaaggt 253 |||||| ||| ||||||| ||||| || || ||||| || |||||||||||||||||||| Sbjct: 110960 cacgctgaatgagaagaaggtgcagatagtcgatacaacgtgcccttgggtttcaaaggt 111019 Query: 254 g 254 | Sbjct: 111020 g 111020 Score = 153 bits (77), Expect = 8e-34 Identities = 101/109 (92%) Strand = Plus / Plus Query: 457 agaaattcaaaaaggctgtttctccaggattcgatcctgatgttgacttggaaaaggtgg 516 ||||||||||||| ||||||||||||||||| ||||||||||||||||| | || || | Sbjct: 111513 agaaattcaaaaatgctgtttctccaggatttgatcctgatgttgacttagtgaaagttg 111572 Query: 517 gcattgcaaatcaaacaacaatgcttaaaggagaaactgaagaaattgg 565 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111573 gcattgccaatcaaacaacaatgcttaaaggagaaactgaagaaattgg 111621 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 250 aggtgtggaacatggttgagaagcataagaagggcgactatacttctattattcatggaa 309 ||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 111118 aggtgtggaacatggttgaaaagcacaagaagggtgactacacttctattattcatggaa 111177 Query: 310 agtatgcccatgaagagactgttgccactgcttcttttgctgggaagtacattattgtga 369 | || |||||||||| ||||||||||||||||| ||||| |||| ||||| ||||| | Sbjct: 111178 aatactcccatgaagaaactgttgccactgcttcctttgcagggacatacatcattgtta 111237 Query: 370 agaa 373 |||| Sbjct: 111238 agaa 111241 Score = 107 bits (54), Expect = 4e-20 Identities = 66/70 (94%) Strand = Plus / Plus Query: 2 gcgcaagcagttccccgaggagcgcatctggatcaccaacgagatcatccacaaccccac 61 |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||| Sbjct: 110359 gcgcaagcagttccccgacgatcgcatctggctcaccaacgagatcatccacaaccccac 110418 Query: 62 ggtcaacaag 71 ||||||||| Sbjct: 110419 cgtcaacaag 110428 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 390 tatgtatgtgattatatacttggtggccaacttgatgggtctagcgcaactagagaggag 449 |||||||||||||||||||||||||||||||||||||| |||||| | || | ||||||| Sbjct: 111353 tatgtatgtgattatatacttggtggccaacttgatggttctagctccacaaaagaggag 111412 Query: 450 ttccttgag 458 ||||||||| Sbjct: 111413 ttccttgag 111421 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/109 (86%) Strand = Plus / Plus Query: 457 agaaattcaaaaaggctgtttctccaggattcgatcctgatgttgacttggaaaaggtgg 516 ||||||||| | | ||||| ||||||||||| || |||||| |||||||||| | || | Sbjct: 105313 agaaattcagatatgctgtctctccaggatttgaccctgatattgacttggagagagtag 105372 Query: 517 gcattgcaaatcaaacaacaatgcttaaaggagaaactgaagaaattgg 565 || ||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 105373 gcgttgtgaatcaaacaacaatgcttaaaggagaaactaaagaaattgg 105421 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 297 attattcatggaaagtatgcccatgaagagactgttgccactgcttcttttgctgggaag 356 ||||| |||||||| |||||||| |||||||||||||| || || |||||||| | ||| Sbjct: 104941 attatccatggaaaatatgcccacgaagagactgttgcaaccgcctcttttgcagacaag 105000 Query: 357 tacattattgtgaag 371 ||||| ||||||||| Sbjct: 105001 tacatcattgtgaag 105015 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Plus Query: 390 tatgtatgtgattatatacttggtggccaacttgatgggtctagcgcaactagagaggag 449 ||||| |||||||| || |||| ||||||||||||||||| ||| |||| | |||| || Sbjct: 105167 tatgtgtgtgattacattcttgaaggccaacttgatgggtccagctcaacaaaagagaag 105226 Query: 450 ttcctt 455 |||||| Sbjct: 105227 ttcctt 105232 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Plus Query: 180 gtggatgagatgtacacgctaaatcagaagaacgtgcaaattgttgatacgacatgccct 239 |||||||||||| ||||||||| |||||||||||| || ||||| || || |||||| Sbjct: 91252 gtggatgagatggtcacgctaaacaggaagaacgtgcacatagttgacacaacctgccct 91311 Query: 240 t 240 | Sbjct: 91312 t 91312
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Minus Query: 74 attggaggacatgggtgtcaaagatattcctgttaacgctggtattaaggattttgatgt 133 ||||||||||||||| ||| || | ||||||||| | || |||||||||||||| ||||| Sbjct: 29660537 attggaggacatgggcgtccaaaacattcctgttgatgcaggtattaaggatttcgatgt 29660478 Query: 134 tattgaacaaggtgatgttgttgtcttgcctgcatttggagctgctgtggatgagatgta 193 | | || ||||| |||||||| || ||||||||||||||||| || ||||| |||||||| Sbjct: 29660477 tgtcgagcaaggggatgttgtcgtattgcctgcatttggagcggccgtggaggagatgta 29660418 Query: 194 cacgctaaatcagaagaacgtgcaaattgttgatacgacatgcccttgggtttcaaaggt 253 |||||| ||| ||||||| ||||| || || ||||| || |||||||||||||||||||| Sbjct: 29660417 cacgctgaatgagaagaaggtgcagatagtcgatacaacgtgcccttgggtttcaaaggt 29660358 Query: 254 g 254 | Sbjct: 29660357 g 29660357 Score = 153 bits (77), Expect = 8e-34 Identities = 101/109 (92%) Strand = Plus / Minus Query: 457 agaaattcaaaaaggctgtttctccaggattcgatcctgatgttgacttggaaaaggtgg 516 ||||||||||||| ||||||||||||||||| ||||||||||||||||| | || || | Sbjct: 29659864 agaaattcaaaaatgctgtttctccaggatttgatcctgatgttgacttagtgaaagttg 29659805 Query: 517 gcattgcaaatcaaacaacaatgcttaaaggagaaactgaagaaattgg 565 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 29659804 gcattgccaatcaaacaacaatgcttaaaggagaaactgaagaaattgg 29659756 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 250 aggtgtggaacatggttgagaagcataagaagggcgactatacttctattattcatggaa 309 ||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 29660259 aggtgtggaacatggttgaaaagcacaagaagggtgactacacttctattattcatggaa 29660200 Query: 310 agtatgcccatgaagagactgttgccactgcttcttttgctgggaagtacattattgtga 369 | || |||||||||| ||||||||||||||||| ||||| |||| ||||| ||||| | Sbjct: 29660199 aatactcccatgaagaaactgttgccactgcttcctttgcagggacatacatcattgtta 29660140 Query: 370 agaa 373 |||| Sbjct: 29660139 agaa 29660136 Score = 107 bits (54), Expect = 4e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 2 gcgcaagcagttccccgaggagcgcatctggatcaccaacgagatcatccacaaccccac 61 |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||| Sbjct: 29661018 gcgcaagcagttccccgacgatcgcatctggctcaccaacgagatcatccacaaccccac 29660959 Query: 62 ggtcaacaag 71 ||||||||| Sbjct: 29660958 cgtcaacaag 29660949 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/109 (86%) Strand = Plus / Minus Query: 457 agaaattcaaaaaggctgtttctccaggattcgatcctgatgttgacttggaaaaggtgg 516 ||||||||| | | ||||| ||||||||||| || |||||| |||||||||| | || | Sbjct: 29666064 agaaattcagatatgctgtctctccaggatttgaccctgatattgacttggagagagtag 29666005 Query: 517 gcattgcaaatcaaacaacaatgcttaaaggagaaactgaagaaattgg 565 || ||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 29666004 gcgttgtgaatcaaacaacaatgcttaaaggagaaactaaagaaattgg 29665956 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 390 tatgtatgtgattatatacttggtggccaacttgatgggtctagcgcaactagagaggag 449 |||||||||||||||||||||||||||||||||||||| |||||| | || | ||||||| Sbjct: 29660024 tatgtatgtgattatatacttggtggccaacttgatggttctagctccacaaaagaggag 29659965 Query: 450 ttccttgag 458 ||||||||| Sbjct: 29659964 ttccttgag 29659956 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 297 attattcatggaaagtatgcccatgaagagactgttgccactgcttcttttgctgggaag 356 ||||| |||||||| |||||||| |||||||||||||| || || |||||||| | ||| Sbjct: 29666436 attatccatggaaaatatgcccacgaagagactgttgcaaccgcctcttttgcagacaag 29666377 Query: 357 tacattattgtgaag 371 ||||| ||||||||| Sbjct: 29666376 tacatcattgtgaag 29666362 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 390 tatgtatgtgattatatacttggtggccaacttgatgggtctagcgcaactagagaggag 449 ||||| |||||||| || |||| ||||||||||||||||| ||| |||| | |||| || Sbjct: 29666210 tatgtgtgtgattacattcttgaaggccaacttgatgggtccagctcaacaaaagagaag 29666151 Query: 450 ttcctt 455 |||||| Sbjct: 29666150 ttcctt 29666145 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Minus Query: 180 gtggatgagatgtacacgctaaatcagaagaacgtgcaaattgttgatacgacatgccct 239 |||||||||||| ||||||||| |||||||||||| || ||||| || || |||||| Sbjct: 29680125 gtggatgagatggtcacgctaaacaggaagaacgtgcacatagttgacacaacctgccct 29680066 Query: 240 t 240 | Sbjct: 29680065 t 29680065
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 161 bits (81), Expect = 3e-36 Identities = 156/181 (86%) Strand = Plus / Minus Query: 74 attggaggacatgggtgtcaaagatattcctgttaacgctggtattaaggattttgatgt 133 ||||||||||||||| ||| || | ||||||||| | || |||||||||||||| ||||| Sbjct: 29751959 attggaggacatgggcgtccaaaacattcctgttgatgcaggtattaaggatttcgatgt 29751900 Query: 134 tattgaacaaggtgatgttgttgtcttgcctgcatttggagctgctgtggatgagatgta 193 | | || ||||| |||||||| || ||||||||||||||||| || ||||| |||||||| Sbjct: 29751899 tgtcgagcaaggggatgttgtcgtattgcctgcatttggagcggccgtggaggagatgta 29751840 Query: 194 cacgctaaatcagaagaacgtgcaaattgttgatacgacatgcccttgggtttcaaaggt 253 |||||| ||| ||||||| ||||| || || ||||| || |||||||||||||||||||| Sbjct: 29751839 cacgctgaatgagaagaaggtgcagatagtcgatacaacgtgcccttgggtttcaaaggt 29751780 Query: 254 g 254 | Sbjct: 29751779 g 29751779 Score = 153 bits (77), Expect = 8e-34 Identities = 101/109 (92%) Strand = Plus / Minus Query: 457 agaaattcaaaaaggctgtttctccaggattcgatcctgatgttgacttggaaaaggtgg 516 ||||||||||||| ||||||||||||||||| ||||||||||||||||| | || || | Sbjct: 29751286 agaaattcaaaaatgctgtttctccaggatttgatcctgatgttgacttagtgaaagttg 29751227 Query: 517 gcattgcaaatcaaacaacaatgcttaaaggagaaactgaagaaattgg 565 ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 29751226 gcattgccaatcaaacaacaatgcttaaaggagaaactgaagaaattgg 29751178 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 250 aggtgtggaacatggttgagaagcataagaagggcgactatacttctattattcatggaa 309 ||||||||||||||||||| ||||| |||||||| ||||| ||||||||||||||||||| Sbjct: 29751681 aggtgtggaacatggttgaaaagcacaagaagggtgactacacttctattattcatggaa 29751622 Query: 310 agtatgcccatgaagagactgttgccactgcttcttttgctgggaagtacattattgtga 369 | || |||||||||| ||||||||||||||||| ||||| |||| ||||| ||||| | Sbjct: 29751621 aatactcccatgaagaaactgttgccactgcttcctttgcagggacatacatcattgtta 29751562 Query: 370 agaa 373 |||| Sbjct: 29751561 agaa 29751558 Score = 107 bits (54), Expect = 4e-20 Identities = 66/70 (94%) Strand = Plus / Minus Query: 2 gcgcaagcagttccccgaggagcgcatctggatcaccaacgagatcatccacaaccccac 61 |||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||| Sbjct: 29752440 gcgcaagcagttccccgacgatcgcatctggctcaccaacgagatcatccacaaccccac 29752381 Query: 62 ggtcaacaag 71 ||||||||| Sbjct: 29752380 cgtcaacaag 29752371 Score = 97.6 bits (49), Expect = 4e-17 Identities = 94/109 (86%) Strand = Plus / Minus Query: 457 agaaattcaaaaaggctgtttctccaggattcgatcctgatgttgacttggaaaaggtgg 516 ||||||||| | | ||||| ||||||||||| || |||||| |||||||||| | || | Sbjct: 29757486 agaaattcagatatgctgtctctccaggatttgaccctgatattgacttggagagagtag 29757427 Query: 517 gcattgcaaatcaaacaacaatgcttaaaggagaaactgaagaaattgg 565 || ||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 29757426 gcgttgtgaatcaaacaacaatgcttaaaggagaaactaaagaaattgg 29757378 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 390 tatgtatgtgattatatacttggtggccaacttgatgggtctagcgcaactagagaggag 449 |||||||||||||||||||||||||||||||||||||| |||||| | || | ||||||| Sbjct: 29751446 tatgtatgtgattatatacttggtggccaacttgatggttctagctccacaaaagaggag 29751387 Query: 450 ttccttgag 458 ||||||||| Sbjct: 29751386 ttccttgag 29751378 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 297 attattcatggaaagtatgcccatgaagagactgttgccactgcttcttttgctgggaag 356 ||||| |||||||| |||||||| |||||||||||||| || || |||||||| | ||| Sbjct: 29757858 attatccatggaaaatatgcccacgaagagactgttgcaaccgcctcttttgcagacaag 29757799 Query: 357 tacattattgtgaag 371 ||||| ||||||||| Sbjct: 29757798 tacatcattgtgaag 29757784 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 390 tatgtatgtgattatatacttggtggccaacttgatgggtctagcgcaactagagaggag 449 ||||| |||||||| || |||| ||||||||||||||||| ||| |||| | |||| || Sbjct: 29757632 tatgtgtgtgattacattcttgaaggccaacttgatgggtccagctcaacaaaagagaag 29757573 Query: 450 ttcctt 455 |||||| Sbjct: 29757572 ttcctt 29757567 Score = 42.1 bits (21), Expect = 2.0 Identities = 51/61 (83%) Strand = Plus / Minus Query: 180 gtggatgagatgtacacgctaaatcagaagaacgtgcaaattgttgatacgacatgccct 239 |||||||||||| ||||||||| |||||||||||| || ||||| || || |||||| Sbjct: 29771547 gtggatgagatggtcacgctaaacaggaagaacgtgcacatagttgacacaacctgccct 29771488 Query: 240 t 240 | Sbjct: 29771487 t 29771487
>gb|DQ252518.1| Solanum tuberosum clone 099C12 LYTB-like protein precursor-like mRNA, complete cds Length = 1599 Score = 147 bits (74), Expect = 5e-32 Identities = 191/230 (83%) Strand = Plus / Plus Query: 210 aacgtgcaaattgttgatacgacatgcccttgggtttcaaaggtgtggaacatggttgag 269 ||||| |||||||||||||| || ||||| ||||| | ||||| ||||||| ||||| Sbjct: 637 aacgtacaaattgttgatacaacctgcccgtgggtgactaaggtttggaacaccgttgaa 696 Query: 270 aagcataagaagggcgactatacttctattattcatggaaagtatgcccatgaagagact 329 ||||| |||||||| | ||||| || ||||| ||||| || ||||| ||||| || ||| Sbjct: 697 aagcacaagaagggagcatatacctccattatccatggtaaatatgctcatgaggaaact 756 Query: 330 gttgccactgcttcttttgctgggaagtacattattgtgaagaatatggtcgaggcaaca 389 ||||| ||||| || ||||||||||| ||||| ||||||||||| |||| |||||||| Sbjct: 757 gttgcgactgcatcctttgctgggaaatacatcattgtgaagaacatggcagaggcaact 816 Query: 390 tatgtatgtgattatatacttggtggccaacttgatgggtctagcgcaac 439 ||||| ||||||||||| ||||| || |||||||||| |||||| |||| Sbjct: 817 tatgtctgtgattatattcttggaggtaaacttgatggttctagctcaac 866
>ref|NM_119600.2| Arabidopsis thaliana CLB6 (CHLOROPLAST BIOGENESIS) AT4G34350 (CLB6) mRNA, complete cds Length = 1677 Score = 109 bits (55), Expect = 1e-20 Identities = 205/255 (80%) Strand = Plus / Plus Query: 213 gtgcaaattgttgatacgacatgcccttgggtttcaaaggtgtggaacatggttgagaag 272 |||||||||||||| ||||| || |||||||| ||||||| ||||||| |||||||||| Sbjct: 691 gtgcaaattgttgacacgacttgtccttgggtgacaaaggtctggaacacggttgagaag 750 Query: 273 cataagaagggcgactatacttctattattcatggaaagtatgcccatgaagagactgtt 332 || |||||||| || || || || | || ||||| || ||| ||||||||||| || Sbjct: 751 cacaagaagggggaatacacatcagtaatccatggtaaatataatcatgaagagacgatt 810 Query: 333 gccactgcttcttttgctgggaagtacattattgtgaagaatatggtcgaggcaacatat 392 || ||||| |||||||| || |||||||| ||||| ||||| ||| ||||||| || Sbjct: 811 gcaactgcgtcttttgcaggaaagtacatcattgtaaagaacatgaaagaggcaaattac 870 Query: 393 gtatgtgattatatacttggtggccaacttgatgggtctagcgcaactagagaggagttc 452 || |||||||| || || ||||||||| ||||| |||||| | || | |||||||||| Sbjct: 871 gtttgtgattacattctcggtggccaatacgatggatctagctccacaaaagaggagttc 930 Query: 453 cttgagaaattcaaa 467 | |||||||||||| Sbjct: 931 atggagaaattcaaa 945
>gb|AY081454.1| Arabidopsis thaliana putative protein (At4g34350) mRNA, complete cds Length = 1526 Score = 109 bits (55), Expect = 1e-20 Identities = 205/255 (80%) Strand = Plus / Plus Query: 213 gtgcaaattgttgatacgacatgcccttgggtttcaaaggtgtggaacatggttgagaag 272 |||||||||||||| ||||| || |||||||| ||||||| ||||||| |||||||||| Sbjct: 616 gtgcaaattgttgacacgacttgtccttgggtgacaaaggtctggaacacggttgagaag 675 Query: 273 cataagaagggcgactatacttctattattcatggaaagtatgcccatgaagagactgtt 332 || |||||||| || || || || | || ||||| || ||| ||||||||||| || Sbjct: 676 cacaagaagggggaatacacatcagtaatccatggtaaatataatcatgaagagacgatt 735 Query: 333 gccactgcttcttttgctgggaagtacattattgtgaagaatatggtcgaggcaacatat 392 || ||||| |||||||| || |||||||| ||||| ||||| ||| ||||||| || Sbjct: 736 gcaactgcgtcttttgcaggaaagtacatcattgtaaagaacatgaaagaggcaaattac 795 Query: 393 gtatgtgattatatacttggtggccaacttgatgggtctagcgcaactagagaggagttc 452 || |||||||| || || ||||||||| ||||| |||||| | || | |||||||||| Sbjct: 796 gtttgtgattacattctcggtggccaatacgatggatctagctccacaaaagaggagttc 855 Query: 453 cttgagaaattcaaa 467 | |||||||||||| Sbjct: 856 atggagaaattcaaa 870
>gb|AY168881.1| Arabidopsis thaliana ISPH (ISPH) mRNA, complete cds Length = 1578 Score = 109 bits (55), Expect = 1e-20 Identities = 205/255 (80%) Strand = Plus / Plus Query: 213 gtgcaaattgttgatacgacatgcccttgggtttcaaaggtgtggaacatggttgagaag 272 |||||||||||||| ||||| || |||||||| ||||||| ||||||| |||||||||| Sbjct: 640 gtgcaaattgttgacacgacttgtccttgggtgacaaaggtctggaacacggttgagaag 699 Query: 273 cataagaagggcgactatacttctattattcatggaaagtatgcccatgaagagactgtt 332 || |||||||| || || || || | || ||||| || ||| ||||||||||| || Sbjct: 700 cacaagaagggggaatacacatcagtaatccatggtaaatataatcatgaagagacgatt 759 Query: 333 gccactgcttcttttgctgggaagtacattattgtgaagaatatggtcgaggcaacatat 392 || ||||| |||||||| || |||||||| ||||| ||||| ||| ||||||| || Sbjct: 760 gcaactgcgtcttttgcaggaaagtacatcattgtaaagaacatgaaagaggcaaattac 819 Query: 393 gtatgtgattatatacttggtggccaacttgatgggtctagcgcaactagagaggagttc 452 || |||||||| || || ||||||||| ||||| |||||| | || | |||||||||| Sbjct: 820 gtttgtgattacattctcggtggccaatacgatggatctagctccacaaaagaggagttc 879 Query: 453 cttgagaaattcaaa 467 | |||||||||||| Sbjct: 880 atggagaaattcaaa 894
>gb|AY042877.1| Arabidopsis thaliana putative protein (F10M10.120) mRNA, complete cds Length = 1625 Score = 109 bits (55), Expect = 1e-20 Identities = 205/255 (80%) Strand = Plus / Plus Query: 213 gtgcaaattgttgatacgacatgcccttgggtttcaaaggtgtggaacatggttgagaag 272 |||||||||||||| ||||| || |||||||| ||||||| ||||||| |||||||||| Sbjct: 692 gtgcaaattgttgacacgacttgtccttgggtgacaaaggtctggaacacggttgagaag 751 Query: 273 cataagaagggcgactatacttctattattcatggaaagtatgcccatgaagagactgtt 332 || |||||||| || || || || | || ||||| || ||| ||||||||||| || Sbjct: 752 cacaagaagggggaatacacatcagtaatccatggtaaatataatcatgaagagacgatt 811 Query: 333 gccactgcttcttttgctgggaagtacattattgtgaagaatatggtcgaggcaacatat 392 || ||||| |||||||| || |||||||| ||||| ||||| ||| ||||||| || Sbjct: 812 gcaactgcgtcttttgcaggaaagtacatcattgtaaagaacatgaaagaggcaaattac 871 Query: 393 gtatgtgattatatacttggtggccaacttgatgggtctagcgcaactagagaggagttc 452 || |||||||| || || ||||||||| ||||| |||||| | || | |||||||||| Sbjct: 872 gtttgtgattacattctcggtggccaatacgatggatctagctccacaaaagaggagttc 931 Query: 453 cttgagaaattcaaa 467 | |||||||||||| Sbjct: 932 atggagaaattcaaa 946
>gb|AF270978.1|AF270978 Adonis palaestina LYTB-like protein precursor (lytB) mRNA, complete cds Length = 1599 Score = 99.6 bits (50), Expect = 1e-17 Identities = 128/154 (83%) Strand = Plus / Plus Query: 234 tgcccttgggtttcaaaggtgtggaacatggttgagaagcataagaagggcgactatact 293 ||||| ||||| || ||||||||||| |||||||||||||||||||| || || || Sbjct: 657 tgcccatgggtatctaaggtgtggaattccgttgagaagcataagaagggagagtacaca 716 Query: 294 tctattattcatggaaagtatgcccatgaagagactgttgccactgcttcttttgctggg 353 || ||||||||||| || ||| |||| || || ||| |||| ||||| |||||||||||| Sbjct: 717 tcaattattcatggtaaatattcccacgaggaaactattgcaactgcatcttttgctggg 776 Query: 354 aagtacattattgtgaagaatatggtcgaggcaa 387 ||||| || ||||||||||| |||| ||||||| Sbjct: 777 aagtatatcattgtgaagaacatggatgaggcaa 810 Score = 50.1 bits (25), Expect = 0.008 Identities = 49/57 (85%) Strand = Plus / Plus Query: 516 ggcattgcaaatcaaacaacaatgcttaaaggagaaactgaagaaattggaaaactt 572 ||||||||||| ||||| |||||| | || |||||||| ||||| ||||| |||||| Sbjct: 939 ggcattgcaaaccaaactacaatgttgaagggagaaacagaagatattggtaaactt 995
>gb|AF398146.1|AF398146 Brassica rapa subsp. pekinensis LYTB-like protein 2 (lytB) mRNA, partial cds Length = 672 Score = 95.6 bits (48), Expect = 2e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 331 ttgccactgcttcttttgctgggaagtacattattgtgaagaatatggtcgaggcaacat 390 |||| ||||| |||||||| ||||||||||| ||||| ||||| ||| ||||| | | Sbjct: 13 ttgcaactgcctcttttgcagggaagtacatcattgtaaagaacatgaaagaggcgaatt 72 Query: 391 atgtatgtgattatatacttggtggccaacttgatgggtctagcgcaactagagaggagt 450 | || |||||||| ||||||||||| |||| |||||||||||| |||| | |||||||| Sbjct: 73 acgtttgtgattacatacttggtggtgaactcgatgggtctagctcaacaaaagaggagt 132 Query: 451 tccttgagaaattcaaaaaggctgtttc 478 || | |||||||||||| | |||||||| Sbjct: 133 tcatggagaaattcaaatatgctgtttc 160
>gb|AY497304.1| Nicotiana benthamiana isopentenyl/dimethylallyl diphosphate synthase mRNA, partial cds Length = 500 Score = 91.7 bits (46), Expect = 2e-15 Identities = 165/202 (81%), Gaps = 2/202 (0%) Strand = Plus / Plus Query: 365 tgtgaagaatatggtcgaggcaacatatgtatgtgattatatacttggtggccaacttga 424 ||||||||| |||| |||||||| ||||||||||||||||| ||||| || ||||||| Sbjct: 1 tgtgaagaacatggcagaggcaacttatgtatgtgattatattcttggaggtaaacttga 60 Query: 425 tgggtctagcgcaactagagaggagttccttgagaaattcaaaaaggctgtttctccagg 484 || |||||| |||| | ||||| || | ||||||||||||| || |||||| ||| Sbjct: 61 cggttctagctcaaccaaagaggcatttatgcagaaattcaaaaatgcagtttctaaagg 120 Query: 485 attcgatcctgatgttga-cttggaaaaggtgggcattgcaaatcaaacaacaatgctta 543 |||||||| |||||||| |||| |||| | || |||||||| ||||| |||||| | | Sbjct: 121 gttcgatccggatgttgatcttgtaaaaact-ggtattgcaaaccaaactacaatgttga 179 Query: 544 aaggagaaactgaagaaattgg 565 | |||||||| ||||||||||| Sbjct: 180 agggagaaacagaagaaattgg 201
>gb|AF398145.1|AF398145 Brassica rapa subsp. pekinensis LYTB-like protein 1 (lytB) mRNA, partial cds Length = 688 Score = 87.7 bits (44), Expect = 4e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 331 ttgccactgcttcttttgctgggaagtacattattgtgaagaatatggtcgaggcaacat 390 |||| ||||| |||||||| ||||||||||| ||||| ||||| ||| ||||| | | Sbjct: 1 ttgcaactgcctcttttgcagggaagtacatcattgtaaagaacatgaaagaggcgaatt 60 Query: 391 atgtatgtgattatatacttggtggccaacttgatgggtctagcgcaactagagaggagt 450 | || |||||||| ||||||||||| |||| ||||| |||||| |||| | |||||||| Sbjct: 61 acgtttgtgattacatacttggtggtgaactcgatggatctagctcaacaaaagaggagt 120 Query: 451 tccttgagaaattcaaaaaggctgtttc 478 || | |||||||||||| | |||||||| Sbjct: 121 tcatggagaaattcaaatatgctgtttc 148
>gb|DQ269451.2| Stevia rebaudiana IPP/DMAPP synthase (ispH) mRNA, complete cds Length = 1637 Score = 71.9 bits (36), Expect = 2e-09 Identities = 159/200 (79%) Strand = Plus / Plus Query: 216 caaattgttgatacgacatgcccttgggtttcaaaggtgtggaacatggttgagaagcat 275 ||||| ||||| || |||||||||||||| || |||||||||| ||||| || ||| Sbjct: 661 caaatagttgacacaacatgcccttgggtatctaaggtgtggacttctgttgaaaaacat 720 Query: 276 aagaagggcgactatacttctattattcatggaaagtatgcccatgaagagactgttgcc 335 || ||||| | ||||||||||| |||||||| || ||| | || || || |||||||| Sbjct: 721 aaaaagggggcttatacttctataattcatggtaaatattcgcacgaggaaactgttgca 780 Query: 336 actgcttcttttgctgggaagtacattattgtgaagaatatggtcgaggcaacatatgta 395 || || ||||| || || ||||| | ||||| |||||||||| ||||| ||||| || Sbjct: 781 accgcatctttcgcaggaaagtatgtcattgttaagaatatggatgaggcgacatacgtg 840 Query: 396 tgtgattatatacttggtgg 415 |||||||| || |||||||| Sbjct: 841 tgtgattacatccttggtgg 860 Score = 60.0 bits (30), Expect = 8e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 522 gcaaatcaaacaacaatgcttaaaggagaaactgaagaaattggaaaact 571 ||||| ||||| ||||||||||| |||||||| || |||||||||||||| Sbjct: 967 gcaaaccaaactacaatgcttaagggagaaacagaggaaattggaaaact 1016
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 27 atctggatcaccaacgagatcatccacaaccccacggtcaac 68 ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1172846 atctggatcaccaacgagatcatccacaaccccctggtcaac 1172805
>gb|DQ364231.1| Ginkgo biloba 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (HDR) mRNA, complete cds Length = 1827 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 519 attgcaaatcaaacaacaatgcttaaaggagaaactgaagaaattggaaaact 571 |||||||||||||| |||||||| ||||| |||||||| || ||||||||||| Sbjct: 974 attgcaaatcaaacgacaatgctgaaaggggaaactgaggatattggaaaact 1026 Score = 60.0 bits (30), Expect = 8e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 240 tgggtttcaaaggtgtggaacatggttgagaagcataagaagggcgactatacttctatt 299 ||||| || ||||| ||||||| ||||||||||| || |||| || || || || || Sbjct: 695 tgggtgtctaaggtctggaacactgttgagaagcacaaacagggggattacacctccatc 754 Query: 300 attcatggaaagtatgcccatgaagagactgttgccactgcttcttttgc 349 |||||||| || ||||| |||||||| ||||||||||| || |||||||| Sbjct: 755 attcatgggaaatatgctcatgaagaaactgttgccacagcatcttttgc 804
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 21 gagcgcatctggatcaccaacgagatcatccacaaccccacggtcaac 68 ||||| |||||||| |||||||||||||||||||| ||| |||||||| Sbjct: 1547942 gagcggatctggattaccaacgagatcatccacaatccctcggtcaac 1547989 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 234 tgcccttgggtttcaaaggtgtggaaca 261 |||||||||||||| ||||| ||||||| Sbjct: 1548155 tgcccttgggtttccaaggtctggaaca 1548182
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 21 gagcgcatctggatcaccaacgagatcatccacaaccccacggtcaac 68 ||||| |||||||| |||||||||||||||||||| ||| |||||||| Sbjct: 72941 gagcggatctggattaccaacgagatcatccacaatccctcggtcaac 72894 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 234 tgcccttgggtttcaaaggtgtggaaca 261 |||||||||||||| ||||| ||||||| Sbjct: 72728 tgcccttgggtttccaaggtctggaaca 72701
>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81 Length = 195921 Score = 60.0 bits (30), Expect = 8e-06 Identities = 102/126 (80%) Strand = Plus / Minus Query: 248 aaaggtgtggaacatggttgagaagcataagaagggcgactatacttctattattcatgg 307 |||||| ||||||| |||||||||||| |||||||| || || || || | || ||||| Sbjct: 75625 aaaggtctggaacacggttgagaagcacaagaagggggaatacacatcagtaatccatgg 75566 Query: 308 aaagtatgcccatgaagagactgttgccactgcttcttttgctgggaagtacattattgt 367 || ||| ||||||||||| |||| ||||| |||||||| || |||||||| ||||| Sbjct: 75565 taaatataatcatgaagagacgattgcaactgcgtcttttgcaggaaagtacatcattgt 75506 Query: 368 gaagaa 373 ||||| Sbjct: 75505 aaagaa 75500 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 213 gtgcaaattgttgatacgacatgcccttgggtttcaaaggt 253 |||||||||||||| ||||| || |||||||| ||||||| Sbjct: 75761 gtgcaaattgttgacacgacttgtccttgggtgacaaaggt 75721
>emb|AL035521.1|ATF10M10 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M10 (ESSA project) Length = 114367 Score = 60.0 bits (30), Expect = 8e-06 Identities = 102/126 (80%) Strand = Plus / Minus Query: 248 aaaggtgtggaacatggttgagaagcataagaagggcgactatacttctattattcatgg 307 |||||| ||||||| |||||||||||| |||||||| || || || || | || ||||| Sbjct: 67106 aaaggtctggaacacggttgagaagcacaagaagggggaatacacatcagtaatccatgg 67047 Query: 308 aaagtatgcccatgaagagactgttgccactgcttcttttgctgggaagtacattattgt 367 || ||| ||||||||||| |||| ||||| |||||||| || |||||||| ||||| Sbjct: 67046 taaatataatcatgaagagacgattgcaactgcgtcttttgcaggaaagtacatcattgt 66987 Query: 368 gaagaa 373 ||||| Sbjct: 66986 aaagaa 66981 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 213 gtgcaaattgttgatacgacatgcccttgggtttcaaaggt 253 |||||||||||||| ||||| || |||||||| ||||||| Sbjct: 67242 gtgcaaattgttgacacgacttgtccttgggtgacaaaggt 67202
>gb|AY883838.1| Arabidopsis thaliana chloroplast 1-hydroxy-2-methyl-butenyl 4-diphosphate reductase (ISPH) gene, complete cds; nuclear gene for chloroplast product Length = 2367 Score = 60.0 bits (30), Expect = 8e-06 Identities = 102/126 (80%) Strand = Plus / Plus Query: 248 aaaggtgtggaacatggttgagaagcataagaagggcgactatacttctattattcatgg 307 |||||| ||||||| |||||||||||| |||||||| || || || || | || ||||| Sbjct: 1117 aaaggtctggaacacggttgagaagcacaagaagggggaatacacatcagtaatccatgg 1176 Query: 308 aaagtatgcccatgaagagactgttgccactgcttcttttgctgggaagtacattattgt 367 || ||| ||||||||||| |||| ||||| |||||||| || |||||||| ||||| Sbjct: 1177 taaatataatcatgaagagacgattgcaactgcgtcttttgcaggaaagtacatcattgt 1236 Query: 368 gaagaa 373 ||||| Sbjct: 1237 aaagaa 1242 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 213 gtgcaaattgttgatacgacatgcccttgggtttcaaaggt 253 |||||||||||||| ||||| || |||||||| ||||||| Sbjct: 981 gtgcaaattgttgacacgacttgtccttgggtgacaaaggt 1021
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 30 tggatcaccaacgagatcatccacaaccc 58 ||||||||||||||||||||||||||||| Sbjct: 2731001 tggatcaccaacgagatcatccacaaccc 2731029
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 30 tggatcaccaacgagatcatccacaaccc 58 ||||||||||||||||||||||||||||| Sbjct: 3499897 tggatcaccaacgagatcatccacaaccc 3499925
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 3 cgcaagcagttccccgaggagcgcatctggatcaccaacgagatcatccacaaccc 58 |||||||| | ||||| |||||| | ||||||||||| ||||||||||||||||| Sbjct: 253278 cgcaagcactaccccgccgagcgcctgtggatcaccaatgagatcatccacaaccc 253223
>dbj|AK222055.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-78-M01 Length = 812 Score = 56.0 bits (28), Expect = 1e-04 Identities = 106/132 (80%) Strand = Plus / Plus Query: 336 actgcttcttttgctgggaagtacattattgtgaagaatatggtcgaggcaacatatgta 395 ||||| |||||||| || |||||||| ||||| ||||| ||| ||||||| || || Sbjct: 3 actgcgtcttttgcaggaaagtacatcattgtaaagaacatgaaagaggcaaattacgtt 62 Query: 396 tgtgattatatacttggtggccaacttgatgggtctagcgcaactagagaggagttcctt 455 |||||||| || || ||||||||| ||||| |||||| | || | |||||||||| | Sbjct: 63 tgtgattacattctcggtggccaatacgatggatctagctccacaaaagaggagttcatg 122 Query: 456 gagaaattcaaa 467 |||||||||||| Sbjct: 123 gagaaattcaaa 134
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 28 tctggatcaccaacgagatcatccacaaccc 58 |||||||||| |||||||||||||||||||| Sbjct: 254605 tctggatcacgaacgagatcatccacaaccc 254575
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 30 tggatcaccaacgagatcatccacaaccccacggtcaac 68 |||||||||||||| ||||||||||||||| | |||||| Sbjct: 288669 tggatcaccaacgaaatcatccacaacccctccgtcaac 288631
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 223 ttgatacgacatgcccttgggtttcaaaggtgtgg 257 ||||||| || |||||||||||||||||||||||| Sbjct: 254639 ttgatacaacgtgcccttgggtttcaaaggtgtgg 254673
>emb|AJ821795.1| Guillardia theta partial mRNA for 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (dpr gene) Length = 994 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 33 atcaccaacgagatcatccacaaccc 58 |||||||||||||||||||||||||| Sbjct: 41 atcaccaacgagatcatccacaaccc 66
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 520 ttgcaaatcaaacaacaatgcttaa 544 ||||||||||||||||||||||||| Sbjct: 288599 ttgcaaatcaaacaacaatgcttaa 288623
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 519 attgcaaatcaaacaacaatgcttaaaggagaaactgaagaaattgg 565 ||||| || |||||||| ||||||||||| |||||||| ||||||| Sbjct: 1151774 attgctaaccaaacaaccatgcttaaaggcgaaactgagcaaattgg 1151728
>gb|AF159699.1|AF159699 Nicotiana tabacum putative host factor mRNA, partial cds Length = 747 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 519 attgcaaatcaaacaacaatgcttaaaggagaaactgaagaaattgg 565 |||||||| ||||| |||||| | || |||||||| ||||||||||| Sbjct: 25 attgcaaaccaaactacaatgttgaagggagaaacagaagaaattgg 71
>ref|XM_811296.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053511843.70) partial mRNA Length = 2763 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 326 gactgttgccactgcttcttttgctgggaa 355 ||||| |||| ||||||||||||||||||| Sbjct: 2711 gactgctgccgctgcttcttttgctgggaa 2740
>gb|AC124713.5| Mus musculus BAC clone RP24-116N2 from chromosome 8, complete sequence Length = 184855 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 catggttgagaagcataagaag 281 |||||||||||||||||||||| Sbjct: 63902 catggttgagaagcataagaag 63923
>gb|AC164311.4| Mus musculus BAC clone RP23-144H18 from chromosome 8, complete sequence Length = 190693 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 260 catggttgagaagcataagaag 281 |||||||||||||||||||||| Sbjct: 154442 catggttgagaagcataagaag 154463
>gb|AC008231.4| Drosophila melanogaster clone BACR12O13, complete sequence Length = 177339 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 aaaggagaaactgaagaaatt 563 ||||||||||||||||||||| Sbjct: 102682 aaaggagaaactgaagaaatt 102662
>emb|AL929387.7| Human DNA sequence from clone RP11-398F12 on chromosome 22, complete sequence Length = 24787 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 tgcctgcatttggagctgctg 180 ||||||||||||||||||||| Sbjct: 16685 tgcctgcatttggagctgctg 16705
>emb|AL136133.14| Human DNA sequence from clone CTA-253N17 on chromosome 1 Contains the 5' end of the C1orf25 gene for chromosome 1 open reading frame 25, the 5' end of the C1orf26 gene for chromosome 1 open reading frame 26 and a CpG island, complete sequence Length = 85565 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 ttaaaggagaaactgaagaaa 561 ||||||||||||||||||||| Sbjct: 53832 ttaaaggagaaactgaagaaa 53812
>emb|AL928799.13| Zebrafish DNA sequence from clone CH211-15B10 in linkage group 7, complete sequence Length = 89993 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gtggaacatggttgagaagca 274 ||||||||||||||||||||| Sbjct: 46523 gtggaacatggttgagaagca 46543
>emb|X62420.1|DMTUDOR D.melanogaster mRNA for tudor protein Length = 8038 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 aaaggagaaactgaagaaatt 563 ||||||||||||||||||||| Sbjct: 6818 aaaggagaaactgaagaaatt 6838
>emb|CR352295.8| Zebrafish DNA sequence from clone DKEY-30J11 in linkage group 7, complete sequence Length = 119970 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gtggaacatggttgagaagca 274 ||||||||||||||||||||| Sbjct: 3134 gtggaacatggttgagaagca 3154
>gb|BC037213.1| Homo sapiens cDNA clone IMAGE:4829494 Length = 2584 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 tgcctgcatttggagctgctg 180 ||||||||||||||||||||| Sbjct: 1929 tgcctgcatttggagctgctg 1909
>gb|AC131565.1| Homo sapiens chromosome 5 clone RP11-1273L8, complete sequence Length = 181283 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 aaaggagaaactgaagaaatt 563 ||||||||||||||||||||| Sbjct: 44297 aaaggagaaactgaagaaatt 44317
>gb|AC114959.2| Homo sapiens chromosome 5 clone RP11-170L13, complete sequence Length = 163805 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 aaaggagaaactgaagaaatt 563 ||||||||||||||||||||| Sbjct: 138169 aaaggagaaactgaagaaatt 138149
>ref|NM_057425.2| Drosophila melanogaster tudor CG9450-RA (tud), mRNA Length = 8205 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 aaaggagaaactgaagaaatt 563 ||||||||||||||||||||| Sbjct: 6985 aaaggagaaactgaagaaatt 7005
>gb|AC011368.5| Homo sapiens chromosome 5 clone CTB-104K23, complete sequence Length = 113582 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 aaaggagaaactgaagaaatt 563 ||||||||||||||||||||| Sbjct: 90386 aaaggagaaactgaagaaatt 90366
>gb|AC011351.5| Homo sapiens chromosome 5 clone CTC-325N22, complete sequence Length = 176804 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 543 aaaggagaaactgaagaaatt 563 ||||||||||||||||||||| Sbjct: 40237 aaaggagaaactgaagaaatt 40217
>gb|AC158528.1| Mus musculus BAC clone RP23-259G7 from chromosome 8, complete sequence Length = 180194 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 tctattattcatggaaagtat 314 ||||||||||||||||||||| Sbjct: 41350 tctattattcatggaaagtat 41330
>gb|AC092127.3| Homo sapiens chromosome 16 clone RP11-118F19, complete sequence Length = 62827 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 tttggagctgctgtggatgag 188 ||||||||||||||||||||| Sbjct: 26714 tttggagctgctgtggatgag 26694
>gb|AE003453.3| Drosophila melanogaster chromosome 2R, section 61 of 73 of the complete sequence Length = 305143 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 543 aaaggagaaactgaagaaatt 563 ||||||||||||||||||||| Sbjct: 102927 aaaggagaaactgaagaaatt 102947
>emb|AL137569.1|HSM802313 Homo sapiens mRNA; cDNA DKFZp586K1721 (from clone DKFZp586K1721) Length = 4163 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 tgcctgcatttggagctgctg 180 ||||||||||||||||||||| Sbjct: 3137 tgcctgcatttggagctgctg 3117
>emb|AL844190.5| Mouse DNA sequence from clone RP23-425H15 on chromosome 4, complete sequence Length = 211151 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 360 attattgtgaagaatatggtc 380 ||||||||||||||||||||| Sbjct: 30184 attattgtgaagaatatggtc 30204
>gb|DP000016.1| Pan troglodytes target 1 genomic scaffold Length = 1623484 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaagaaattggaaaacttg 573 |||||||||||||||||||| Sbjct: 1106352 tgaagaaattggaaaacttg 1106371
>gb|AC011249.7| Drosophila melanogaster clone BACR37F23, complete sequence Length = 164973 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 atgtgattatatacttggtg 414 |||||||||||||||||||| Sbjct: 159778 atgtgattatatacttggtg 159759
>gb|AC093100.2| Drosophila melanogaster clone BACR05J04, complete sequence Length = 214621 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 atgtgattatatacttggtg 414 |||||||||||||||||||| Sbjct: 83443 atgtgattatatacttggtg 83424
>gb|AC087777.2| Pan troglodytes clone RP43-126A24, complete sequence Length = 143154 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaagaaattggaaaacttg 573 |||||||||||||||||||| Sbjct: 105627 tgaagaaattggaaaacttg 105646
>gb|BT014422.1| Lycopersicon esculentum clone 133740R, mRNA sequence Length = 1514 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 tggtattaaggattttgatg 132 |||||||||||||||||||| Sbjct: 1458 tggtattaaggattttgatg 1477
>gb|AC087555.3| Papio anubis clone RP41-63I4, complete sequence Length = 157673 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaagaaattggaaaacttg 573 |||||||||||||||||||| Sbjct: 18867 tgaagaaattggaaaacttg 18886
>gb|AC087598.3| Papio anubis clone RP41-416C2, complete sequence Length = 140358 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaagaaattggaaaacttg 573 |||||||||||||||||||| Sbjct: 103866 tgaagaaattggaaaacttg 103885
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 7.8 Identities = 107/136 (78%) Strand = Plus / Minus Query: 217 aaattgttgatacgacatgcccttgggtttcaaaggtgtggaacatggttgagaagcata 276 |||||||||| || || ||||||||||| ||||| || ||||| | || || ||||| | Sbjct: 3655730 aaattgttgacactacttgcccttgggtctcaaaagtttggaatacagtagaaaagcaca 3655671 Query: 277 agaagggcgactatacttctattattcatggaaagtatgcccatgaagagactgttgcca 336 | || ||||| | || || ||||||||||| || ||| || ||||||||| |||| | Sbjct: 3655670 aaaaaggcgatcacacctcaattattcatggcaaatataagcacgaagagactattgcta 3655611 Query: 337 ctgcttcttttgctgg 352 || |||||||||||| Sbjct: 3655610 ctagttcttttgctgg 3655595
>gb|AC118639.12| Mus musculus chromosome 15, clone RP24-112I4, complete sequence Length = 166053 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 tggaacatggttgagaagca 274 |||||||||||||||||||| Sbjct: 27751 tggaacatggttgagaagca 27732
>gb|AC003987.1| Homo sapiens PAC clone RP5-866N18 from 7, complete sequence Length = 37000 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaagaaattggaaaacttg 573 |||||||||||||||||||| Sbjct: 20797 tgaagaaattggaaaacttg 20816
>emb|AL590725.5| Human DNA sequence from clone RP11-107L15 on chromosome 6 Contains the gene for G protein-coupled receptor slt (melanin-concentrating hormone 2) (SLT), the 3' end of a novel gene and a CpG island, complete sequence Length = 180708 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 aaggagaaactgaagaaatt 563 |||||||||||||||||||| Sbjct: 6376 aaggagaaactgaagaaatt 6357
>emb|AL121913.4|HSJ1059L7 Human DNA sequence from clone RP5-1059L7 on chromosome 20q13.2-13.33 Contains the 5' end of the TMEPAI gene for transmembrane prostate androgen induced mRNA, ESTs, STSs, GSSs and two CpG islands, complete sequence Length = 150224 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 44 gatcatccacaaccccacggtcaacaag 71 ||||||||||||||| | |||||||||| Sbjct: 40137 gatcatccacaacccgatggtcaacaag 40164
>emb|BX119911.6| Mouse DNA sequence from clone RP23-207N15 on chromosome 11 Contains five novel genes, the gene for the ortholog of human PITPNM family member 3 PITPNM3 and three CpG islands, complete sequence Length = 194732 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 atttggagctgctgtggatg 186 |||||||||||||||||||| Sbjct: 119903 atttggagctgctgtggatg 119922
>gb|AC173914.3| Nomascus leucogenys leucogenys clone CH271-445J13, complete sequence Length = 188657 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaagaaattggaaaacttg 573 |||||||||||||||||||| Sbjct: 19069 tgaagaaattggaaaacttg 19088
>emb|AL356833.1|NCB24P11 Neurospora crassa DNA linkage group II BAC clone B24P11 Length = 73184 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 ttttgatgttattgaacaag 144 |||||||||||||||||||| Sbjct: 47870 ttttgatgttattgaacaag 47851
>emb|AL356815.1|NCB24H17 Neurospora crassa DNA linkage group II BAC clone B24H17 Length = 82972 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ttttgatgttattgaacaag 144 |||||||||||||||||||| Sbjct: 74410 ttttgatgttattgaacaag 74429
>gb|AC158753.8| Mus musculus chromosome 5, clone RP23-301E24, complete sequence Length = 190368 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 atgtgattatatacttggtg 414 |||||||||||||||||||| Sbjct: 178840 atgtgattatatacttggtg 178821
>gb|AC090797.5| Homo sapiens chromosome 8, clone RP11-586K2, complete sequence Length = 193929 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ggtgtcaaagatattcctgt 106 |||||||||||||||||||| Sbjct: 75286 ggtgtcaaagatattcctgt 75305
>gb|AC090980.5| Homo sapiens chromosome 8, clone RP11-433O22, complete sequence Length = 182881 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 ggtgtcaaagatattcctgt 106 |||||||||||||||||||| Sbjct: 139273 ggtgtcaaagatattcctgt 139292
>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold Length = 1678549 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaagaaattggaaaacttg 573 |||||||||||||||||||| Sbjct: 1026307 tgaagaaattggaaaacttg 1026326
>gb|AF305426.1|AF305426 Homo sapiens solid tumor-associated 1 protein (STAG1/PMEPA1) gene, complete cds Length = 61505 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 44 gatcatccacaaccccacggtcaacaag 71 ||||||||||||||| | |||||||||| Sbjct: 12668 gatcatccacaacccgatggtcaacaag 12641
>gb|AC158760.4| Mus musculus chromosome 5, clone RP23-319E24, complete sequence Length = 191682 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 atgtgattatatacttggtg 414 |||||||||||||||||||| Sbjct: 177234 atgtgattatatacttggtg 177253
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gcctgcatttggagctgctg 180 |||||||||||||||||||| Sbjct: 13133213 gcctgcatttggagctgctg 13133194
>gb|AF319450.1|AF319450 Tetrahymena thermophila glyceraldehyde-3-phosphate dehydrogenase (GapC) gene, partial cds Length = 918 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 136 ttgaacaaggtgatgttgtt 155 |||||||||||||||||||| Sbjct: 206 ttgaacaaggtgatgttgtt 187
>gb|DP000025.1| Gorilla gorilla gorilla target 1 genomic scaffold Length = 1787293 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaagaaattggaaaacttg 573 |||||||||||||||||||| Sbjct: 1020188 tgaagaaattggaaaacttg 1020207
>gb|DP000029.1| Cercopithecus aethiops target 1 genomic scaffold Length = 1825024 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaagaaattggaaaacttg 573 |||||||||||||||||||| Sbjct: 1046820 tgaagaaattggaaaacttg 1046839
>gb|AF322012.1|AF322012S1 Bradyrhizobium japonicum symbiotic gene region, part 1 of 2 Length = 180000 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggtgatgttgttgtcttgcc 163 |||||||||||||||||||| Sbjct: 121387 ggtgatgttgttgtcttgcc 121406
>gb|DQ003082.1| Homo sapiens matrix metalloproteinase 16 (membrane-inserted) (MMP16) gene, complete cds Length = 290137 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 ggtgtcaaagatattcctgt 106 |||||||||||||||||||| Sbjct: 52957 ggtgtcaaagatattcctgt 52938
>gb|AC123964.3| Macaca mulatta clone CH250-505G9, complete sequence Length = 102927 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaagaaattggaaaacttg 573 |||||||||||||||||||| Sbjct: 98548 tgaagaaattggaaaacttg 98567
>gb|AC122151.4| Macaca mulatta clone CH250-492A14, complete sequence Length = 170601 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaagaaattggaaaacttg 573 |||||||||||||||||||| Sbjct: 17094 tgaagaaattggaaaacttg 17113
>gb|AC112485.4| Homo sapiens 3 BAC RP11-776B11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 168500 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 tttgatgttattgaacaagg 145 |||||||||||||||||||| Sbjct: 41667 tttgatgttattgaacaagg 41648
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggtgatgttgttgtcttgcc 163 |||||||||||||||||||| Sbjct: 1999872 ggtgatgttgttgtcttgcc 1999891
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 40.1 bits (20), Expect = 7.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 219 attgttgatacgacatgcccttgggtttcaaaggtgtggaacatggttgagaagca 274 ||||| ||||| || ||||| ||||| || ||||||||| ||| ||||||||||| Sbjct: 1075632 attgtggataccacctgcccatgggtctcgaaggtgtggcacagtgttgagaagca 1075687
>dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1158F07 Length = 139491 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gcctgcatttggagctgctg 180 |||||||||||||||||||| Sbjct: 108934 gcctgcatttggagctgctg 108915
>dbj|AP003793.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487E11 Length = 151303 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gcctgcatttggagctgctg 180 |||||||||||||||||||| Sbjct: 5514 gcctgcatttggagctgctg 5495
>emb|BX957279.13| Zebrafish DNA sequence from clone DKEY-218N20 in linkage group 19, complete sequence Length = 198752 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ggaacatggttgagaagcat 275 |||||||||||||||||||| Sbjct: 120671 ggaacatggttgagaagcat 120690
>emb|BX511258.6| Zebrafish DNA sequence from clone CH211-81E5 in linkage group 19, complete sequence Length = 200076 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ggaacatggttgagaagcat 275 |||||||||||||||||||| Sbjct: 61785 ggaacatggttgagaagcat 61804
>emb|BX296566.5| Zebrafish DNA sequence from clone CH211-196F4 in linkage group 11, complete sequence Length = 128109 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 attcaaaaaggctgtttctc 480 |||||||||||||||||||| Sbjct: 89687 attcaaaaaggctgtttctc 89668
>gb|AE003613.4| Drosophila melanogaster chromosome 2L, section 22 of 83 of the complete sequence Length = 280095 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 atgtgattatatacttggtg 414 |||||||||||||||||||| Sbjct: 184429 atgtgattatatacttggtg 184448
>gb|AC139303.3| Cercopithecus aethiops clone CH252-456L3, complete sequence Length = 179499 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaagaaattggaaaacttg 573 |||||||||||||||||||| Sbjct: 35868 tgaagaaattggaaaacttg 35887
>gb|AC005285.1|AC005285 Drosophila melanogaster DNA sequence (P1s DS00121 (D128), DS05470 (D270), and DS00108 (D120)), complete sequence Length = 209071 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 atgtgattatatacttggtg 414 |||||||||||||||||||| Sbjct: 197783 atgtgattatatacttggtg 197802
>gb|AC147783.13| Mus musculus chromosome 12, clone RP23-256M6, complete sequence Length = 212734 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 acttctattattcatggaaa 310 |||||||||||||||||||| Sbjct: 5160 acttctattattcatggaaa 5141
>gb|AC153316.3| Colobus guereza clone CH272-352J9, complete sequence Length = 129503 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tgaagaaattggaaaacttg 573 |||||||||||||||||||| Sbjct: 45588 tgaagaaattggaaaacttg 45607
>emb|CT030249.7| Mouse DNA sequence from clone RP23-285E19 on chromosome 12, complete sequence Length = 179748 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 acttctattattcatggaaa 310 |||||||||||||||||||| Sbjct: 144912 acttctattattcatggaaa 144893
>gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, complete sequence Length = 129237 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 tggaacatggttgagaagca 274 |||||||||||||||||||| Sbjct: 17343 tggaacatggttgagaagca 17362 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,094,583 Number of Sequences: 3902068 Number of extensions: 6094583 Number of successful extensions: 126540 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 125869 Number of HSP's gapped (non-prelim): 658 length of query: 573 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 550 effective length of database: 17,143,297,704 effective search space: 9428813737200 effective search space used: 9428813737200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
