| Clone Name | baal39k05 |
|---|---|
| Clone Library Name | barley_pub |
>ZP3R_RAT (Q7TSY4) Zona pellucida sperm-binding protein 3 receptor precursor| (Sperm fertilization protein 56) (sp56) Length = 577 Score = 32.3 bits (72), Expect = 1.3 Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 14/142 (9%) Frame = +2 Query: 170 SSCGAPGMQ----LSCSGDDTILDHPVLGSCKVTEIYYRHCVINLTPLVEPSTQ------ 319 SSC A G SC D ++ +H L ++E V N T L+E Sbjct: 395 SSCQADGKWDPAIPSCEADPSLQNHFALTFPNISETN----VTNRTYLLENENATESFIK 450 Query: 320 --CPLQKLISANLATGVYKLPPSQTTLVRCSSEFIPADPYSVAGPA--ACLSNNATQFWY 487 CP ++I+ NL+ + ++C S Y + G + CL N WY Sbjct: 451 AVCPKPEIINGNLSVEKEIYAEMENITIQCDSG------YDLVGSSNIICLENRT---WY 501 Query: 488 LAESADAYIYDLPRDCEAVSRG 553 I + P DCE V++G Sbjct: 502 --PDIPFCIMEGPEDCEIVNKG 521
>PURL_GLOVI (Q7NIR9) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)| (FGAM synthase II) Length = 774 Score = 30.0 bits (66), Expect = 6.7 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 4/76 (5%) Frame = +2 Query: 218 TILDHPVLGSCKVTEIYYRHCVINLTPLVEPSTQCPLQKLISANLATGVYKLPP----SQ 385 T+LD P +GS Y H V N T +V + + ++ + G + P Sbjct: 413 TLLDSPTIGSKSWVYRQYDHQVQNNTVIVPGAADAAVIRVRPQSFGPGEVEAVPFTERGI 472 Query: 386 TTLVRCSSEFIPADPY 433 V C+S ++ DPY Sbjct: 473 AATVDCNSRYVYLDPY 488
>ZCHC2_HUMAN (Q9C0B9) Zinc finger CCHC domain-containing protein 2 (Fragment)| Length = 899 Score = 29.6 bits (65), Expect = 8.7 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Frame = +2 Query: 236 VLGSCKVTEIYYRHCVINLTPLVEPSTQCPLQKLISANLATGVYKLPPSQTTLVRCSSEF 415 +LG T +H + +PL PST P + +L KLPP Q + C+ Sbjct: 493 ILGPTACTGESEKHLELLASPLPIPSTFLPHSSTPALHLTVQRLKLPPPQGSSESCTVN- 551 Query: 416 IPADP---YSVAGP 448 IP P S+A P Sbjct: 552 IPQQPPGSLSIASP 565
>NR1I3_PHOSI (P62045) Orphan nuclear receptor NR1I3 (Constitutive androstane| receptor) (CAR) Length = 348 Score = 29.6 bits (65), Expect = 8.7 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 1/68 (1%) Frame = +2 Query: 152 GLSTHTSSC-GAPGMQLSCSGDDTILDHPVLGSCKVTEIYYRHCVINLTPLVEPSTQCPL 328 G H +C G G +T L P GSCKV + RHC C L Sbjct: 20 GYHFHALTCEGCKGFFRRTVSKNTGLTCPFAGSCKVNKAQRRHC-----------PACRL 68 Query: 329 QKLISANL 352 QK + A + Sbjct: 69 QKCLDAGM 76
>DDEF1_HUMAN (Q9ULH1) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent| ARF1 GTPase-activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differe Length = 956 Score = 29.6 bits (65), Expect = 8.7 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Frame = -1 Query: 531 SRGRSYMYASADSAKYQNWVALLLRQAAGPATL----YGSAGMNSLEQRTRVVCD 379 S R+Y + + D Y W+++L T+ SAG NSLE T+ + + Sbjct: 216 SHNRTYHFQAEDEQDYVAWISVLTNSKEEALTMAFRGEQSAGENSLEDLTKAIIE 270
>SPAG4_RAT (O55034) Sperm-associated antigen 4 protein (Outer dense| fiber-associated protein SPAG4) Length = 444 Score = 29.6 bits (65), Expect = 8.7 Identities = 18/52 (34%), Positives = 22/52 (42%) Frame = +2 Query: 65 SATSDDEDFSKQCPSHRCSKHGPEIRFPFGLSTHTSSCGAPGMQLSCSGDDT 220 SATS D + + GPE+ P G SSCG P + G DT Sbjct: 30 SATSGDSNGRRSA--------GPELGEPDGRMARGSSCGEPALSSGVPGGDT 73 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,254,897 Number of Sequences: 219361 Number of extensions: 2326702 Number of successful extensions: 5818 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 5634 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5816 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)