>emb|AL606649.4|OSJN00094 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0003B01,
             complete sequence
          Length = 153643

 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Plus

                                                                         
Query: 5     cgttcgcgtgggtctccagcgcgcgcggccggatcgggcagatgctcaccctcggctgca 64
             ||||||||||||| ||||||||||||  | ||||||| |||||| |||| || || ||||
Sbjct: 34275 cgttcgcgtgggtgtccagcgcgcgcaccaggatcggccagatgttcacgctgggttgca 34334

                                                                         
Query: 65    actccttcgtggacgggctcatcgacaacgtcgtcgacgtgctcttctccgacgaccaga 124
              | ||||||| |||  ||||||||||||| ||||||| |  ||||||||||| | | || 
Sbjct: 34335 gcgccttcgtcgactcgctcatcgacaacatcgtcgaggctctcttctccgagggcgagc 34394

                                  
Query: 125   tgcaggactggtccgacgacg 145
             |||||||||||||||||||||
Sbjct: 34395 tgcaggactggtccgacgacg 34415

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Plus

                                                                            
Query: 5        cgttcgcgtgggtctccagcgcgcgcggccggatcgggcagatgctcaccctcggctgca 64
                ||||||||||||| ||||||||||||  | ||||||| |||||| |||| || || ||||
Sbjct: 32515541 cgttcgcgtgggtgtccagcgcgcgcaccaggatcggccagatgttcacgctgggttgca 32515600

                                                                            
Query: 65       actccttcgtggacgggctcatcgacaacgtcgtcgacgtgctcttctccgacgaccaga 124
                 | ||||||| |||  ||||||||||||| ||||||| |  ||||||||||| | | || 
Sbjct: 32515601 gcgccttcgtcgactcgctcatcgacaacatcgtcgaggctctcttctccgagggcgagc 32515660

                                     
Query: 125      tgcaggactggtccgacgacg 145
                |||||||||||||||||||||
Sbjct: 32515661 tgcaggactggtccgacgacg 32515681

>dbj|AK070786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064M09, full
           insert sequence
          Length = 1258

 Score =  105 bits (53), Expect = 2e-19
 Identities = 119/141 (84%)
 Strand = Plus / Plus

                                                                       
Query: 5   cgttcgcgtgggtctccagcgcgcgcggccggatcgggcagatgctcaccctcggctgca 64
           ||||||||||||| ||||||||||||  | ||||||| |||||| |||| || || ||||
Sbjct: 548 cgttcgcgtgggtgtccagcgcgcgcaccaggatcggccagatgttcacgctgggttgca 607

                                                                       
Query: 65  actccttcgtggacgggctcatcgacaacgtcgtcgacgtgctcttctccgacgaccaga 124
            | ||||||| |||  ||||||||||||| ||||||| |  ||||||||||| | | || 
Sbjct: 608 gcgccttcgtcgactcgctcatcgacaacatcgtcgaggctctcttctccgagggcgagc 667

                                
Query: 125 tgcaggactggtccgacgacg 145
           |||||||||||||||||||||
Sbjct: 668 tgcaggactggtccgacgacg 688

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 326     tttcttcagagatggatgccatg 348
               |||||||||||||||||||||||
Sbjct: 3660878 tttcttcagagatggatgccatg 3660900

>dbj|AP002854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0014B15
          Length = 158821

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 326   tttcttcagagatggatgccatg 348
             |||||||||||||||||||||||
Sbjct: 55106 tttcttcagagatggatgccatg 55128

>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 33      ccggatcgggcagatgctcaccctcggctg 62
               |||| |||||| ||||||||||||||||||
Sbjct: 2083231 ccgggtcgggctgatgctcaccctcggctg 2083202

>gb|AF253465.2| Sagittula stellata putative LysR-type transcriptional regulator
            (pcaQ), putative para-hydroxybenzoate hydroxylase (pobA),
            putative gamma-carboxymuconolactone decarboxylase (pcaC),
            protocatechuate 3,4-dioxygenase beta subunit (pcaH),
            protocatechuate 3,4-dioxygenase alpha subunit (pcaG), and
            hypothetical protein genes, complete cds
          Length = 6120

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 128  aggactggtccgacgacgcct 148
            |||||||||||||||||||||
Sbjct: 2180 aggactggtccgacgacgcct 2200

>emb|CT025843.1| Medicago truncatula chromosome 5 clone mth2-17e22, COMPLETE SEQUENCE
          Length = 116514

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 387   cctttgagggttttctgtgat 407
             |||||||||||||||||||||
Sbjct: 69352 cctttgagggttttctgtgat 69332

>gb|AC093432.2| Homo sapiens chromosome 1 clone RP11-136D19, complete sequence
          Length = 174520

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 360    gagctctgctcatctggagtc 380
              |||||||||||||||||||||
Sbjct: 134498 gagctctgctcatctggagtc 134478

>dbj|AB169192.1| Macaca fascicularis testis cDNA, clone: QtsA-17921, similar to human
            serologically defined colon cancer antigen 8
            (SDCCAG8),mRNA, RefSeq: NM_006642.1
          Length = 2608

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 360  gagctctgctcatctggagtc 380
            |||||||||||||||||||||
Sbjct: 2494 gagctctgctcatctggagtc 2474

>gb|AC102342.10| Mus musculus chromosome 18, clone RP23-250K3, complete sequence
          Length = 168009

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 423   tgcatatgatggagcagtac 442
             ||||||||||||||||||||
Sbjct: 91893 tgcatatgatggagcagtac 91874

>ref|XM_867256.1| PREDICTED: Bos taurus similar to golgi autoantigen, golgin subfamily
            a-like (LOC615450), mRNA
          Length = 3852

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 324  tgtttcttcagagatggatg 343
            ||||||||||||||||||||
Sbjct: 2726 tgtttcttcagagatggatg 2707

>gb|AC141927.3| Mus musculus BAC clone RP23-237F16 from chromosome 6, complete sequence
          Length = 186452

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 146   cctgagcacagcgcacagatgcac 169
             |||||||||||| |||||||||||
Sbjct: 88919 cctgagcacagcccacagatgcac 88942

>gb|AC145955.3| Gallus gallus chromosome UNK clone CH261-13M13, complete sequence
          Length = 200102

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 500   ttctctctgccttcttggga 519
             ||||||||||||||||||||
Sbjct: 44550 ttctctctgccttcttggga 44569

>emb|CR381597.7| Zebrafish DNA sequence from clone CH211-182L5 in linkage group 23,
            complete sequence
          Length = 41390

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 48   gctcaccctcggctgcaactcctt 71
            ||||||||||||||||| ||||||
Sbjct: 5711 gctcaccctcggctgcatctcctt 5734

>gb|AC122913.4| Mus musculus BAC clone RP23-25J21 from 3, complete sequence
          Length = 205216

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 379    tctctttgcctttgagggttttct 402
              ||||||||| ||||||||||||||
Sbjct: 146002 tctctttgcttttgagggttttct 146025

>gb|AC159967.2| Mus musculus chromosome 1, clone RP23-302P9, complete sequence
          Length = 185146

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    tggtgcagagctctgctcat 372
              ||||||||||||||||||||
Sbjct: 118999 tggtgcagagctctgctcat 119018

>emb|AJ621334.1| Thermoproteus tenax leuB gene for putative
           isocitrate/isopropylmalate dehydrogenase
          Length = 1023

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 288 caagctccatcgctgctgcg 307
           ||||||||||||||||||||
Sbjct: 637 caagctccatcgctgctgcg 618

>gb|AC183495.1| Brassica oleracea Contig A, complete sequence
          Length = 356505

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 287    ccaagctccatcgctgctgc 306
              ||||||||||||||||||||
Sbjct: 125527 ccaagctccatcgctgctgc 125508

>dbj|AK162401.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330156N22 product:inositol
            polyphosphate-5-phosphatase D, full insert sequence
          Length = 2480

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 353  tggtgcagagctctgctcat 372
            ||||||||||||||||||||
Sbjct: 1777 tggtgcagagctctgctcat 1758

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 86      tcgacaacgtcgtcgacgtg 105
               ||||||||||||||||||||
Sbjct: 2067052 tcgacaacgtcgtcgacgtg 2067033

>gb|AC161938.2| Mus musculus 6 BAC RP24-162E3 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 163330

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 146   cctgagcacagcgcacagatgcac 169
             |||||||||||| |||||||||||
Sbjct: 27852 cctgagcacagcccacagatgcac 27829

>emb|AL773518.3| Mouse DNA sequence from clone RP24-231F12 on chromosome 4, complete
              sequence
          Length = 205765

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 426    atatgatggagcagtactac 445
              ||||||||||||||||||||
Sbjct: 173987 atatgatggagcagtactac 174006

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     gcgcggccggatcgggcaga 46
              ||||||||||||||||||||
Sbjct: 220488 gcgcggccggatcgggcaga 220507

>gb|AC102895.7| Mus musculus chromosome 15, clone RP24-356D22, complete sequence
          Length = 165778

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   tcagagatggatgccatggc 350
             ||||||||||||||||||||
Sbjct: 95034 tcagagatggatgccatggc 95053

>emb|AL928998.9| Mouse DNA sequence from clone RP23-58A8 on chromosome 2, complete
             sequence
          Length = 115361

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 152   cacagcgcacagatgcaccacata 175
             |||||| |||||||||||||||||
Sbjct: 37536 cacagcacacagatgcaccacata 37559

>gb|AC102564.7| Mus musculus chromosome 1, clone RP23-210C12, complete sequence
          Length = 230474

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   tggtgcagagctctgctcat 372
             ||||||||||||||||||||
Sbjct: 43871 tggtgcagagctctgctcat 43890

>gb|L33253.1|MUSHYTROPA Mouse hypertrophy-associated mRNA segment
          Length = 196

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 379 tctctttgcctttgagggttttct 402
           ||||||||| ||||||||||||||
Sbjct: 140 tctctttgcttttgagggttttct 163


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,156,778
Number of Sequences: 3902068
Number of extensions: 4156778
Number of successful extensions: 88935
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88654
Number of HSP's gapped (non-prelim): 281
length of query: 570
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 547
effective length of database: 17,143,297,704
effective search space: 9377383844088
effective search space used: 9377383844088
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)