ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal39h14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_469328.1| Oryza sativa (japonica cultivar-group), mRNA 644 0.0
2dbj|AK100086.1| Oryza sativa (japonica cultivar-group) cDNA clon... 644 0.0
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 127 5e-26
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
5gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E... 127 5e-26
6ref|NM_122188.2| Arabidopsis thaliana GMN10 AT5G22830 (GMN10) mR... 54 6e-04
7gb|AF322255.1|AF322255 Arabidopsis thaliana magnesium transporte... 54 6e-04
8dbj|AB005243.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 54 6e-04
9emb|BX831579.1|CNS09ZTT Arabidopsis thaliana Full-length cDNA Co... 52 0.002
10emb|BX815432.1|CNS0ABBE Arabidopsis thaliana Full-length cDNA Co... 48 0.036
11gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 2.2
12emb|AL353736.11| Human DNA sequence from clone RP11-412P1 on chr... 42 2.2
13ref|XM_417195.1| PREDICTED: Gallus gallus similar to hypothetica... 40 8.9
14gb|AE013116.1| Thermoanaerobacter tengcongensis MB4, section 143... 40 8.9
15gb|AC122245.5| Mus musculus BAC clone RP23-151P21 from 18, compl... 40 8.9
16gb|AC103758.14| Homo sapiens chromosome 8, clone CTD-3135A9, com... 40 8.9
17emb|AJ621740.1| Gallus gallus GMCSF gene for granulocyte-macroph... 40 8.9
18emb|BX935153.1| Gallus gallus finished cDNA, clone ChEST535d16 40 8.9
19emb|BX931867.1| Gallus gallus finished cDNA, clone ChEST795o24 40 8.9
20emb|BX930440.1| Gallus gallus finished cDNA, clone ChEST635j1 40 8.9
21emb|BX682229.4| Mouse DNA sequence from clone RP24-531M17 on chr... 40 8.9
22emb|AL772306.10| Mouse DNA sequence from clone RP23-89L15 on chr... 40 8.9
23gb|AC154673.2| Mus musculus BAC clone RP24-298M20 from chromosom... 40 8.9

>ref|XM_469328.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1425

 Score =  644 bits (325), Expect = 0.0
 Identities = 548/621 (88%), Gaps = 1/621 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gccgactacatctcgctcggcatcagggnagcccgtctacgaggtggtagaagtgaaagc 61
            |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||| |
Sbjct: 397  gccgactacatctcgctcggcatcaggg-agcccgtctacgaggtgatagaagtaaaatc 455

                                                                        
Query: 62   caatggaagcgtgtctaccgaaaaaataagccgccggcagctactgaaatcaagcggcct 121
             ||||| ||  |||||||| |||||||||||||  |||||||| |||||||||| |||||
Sbjct: 456  taatgggaggatgtctaccaaaaaaataagccggaggcagctattgaaatcaagtggcct 515

                                                                        
Query: 122  ccgtctacgagatacacgaagcgtcgacccatcactatggctaatgaactcaatgccttc 181
            ||| |||||||||||  ||||||| |||||||| |||||||||||||| |||||||| ||
Sbjct: 516  ccgcctacgagataccagaagcgttgacccatcgctatggctaatgaattcaatgccatc 575

                                                                        
Query: 182  cctgctggtacgtgagcaggccatattactcaaccttggttccttgcgagcaattgctat 241
            | ||||||| ||||| || ||||||||| | || ||||||||||||||||||||||||||
Sbjct: 576  cttgctggtccgtgaacaagccatattagtaaatcttggttccttgcgagcaattgctat 635

                                                                        
Query: 242  gcatgagcgtgtccttatattcaattataacagcccaggaggaaaggcctttttagagct 301
            |||||| || || |||||||||||||| ||||||||||||||||||||||| |||||   
Sbjct: 636  gcatgaacgcgttcttatattcaattacaacagcccaggaggaaaggccttcttagattc 695

                                                                        
Query: 302  attacgaccccggttaaatccaaggaacatcaatggtgggcctgcgatgccttttcaact 361
            |||||  || |||||||||||||| || ||||||||||| || || ||||| ||||||||
Sbjct: 696  attactgccacggttaaatccaagaaatatcaatggtggaccagcaatgccatttcaact 755

                                                                        
Query: 362  cgaggttgttgaagcagcactgctttctagaatacaaaggctggaacaaagattaatgca 421
             |||||||| ||||| || ||||||||||||||||||||| |||| | |||  |||||| 
Sbjct: 756  tgaggttgtcgaagctgccctgctttctagaatacaaaggttggagcgaaggctaatgcg 815

                                                                        
Query: 422  tgtcgaacctcgtgtggctgcattgcttgaagttctaccaaatcggctgacaggtgatgt 481
            | |||| |||||||||| ||| |||||||||||||||||||||||| |||||| ||||||
Sbjct: 816  tatcgagcctcgtgtgggtgctttgcttgaagttctaccaaatcggttgacagctgatgt 875

                                                                        
Query: 482  tttggagcagcttcgtctaagcaaacaatcattggtcgagctgggttcacgagcaggtga 541
             ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 876  gttggagcagcttcgtctaagcaaacaagcattggttgagctgggttcacgagcaggtga 935

                                                                        
Query: 542  tcttaaacaaatgctcatcgatctcctagaagacccccatgaaattcgtcgaatatgcat 601
            ||| ||||||||||| || ||||||||||| || || |||||||| ||||||||||||||
Sbjct: 936  tctcaaacaaatgcttattgatctcctagatgatcctcatgaaatccgtcgaatatgcat 995

                                 
Query: 602  tatggggagaaattgtacgct 622
             ||||| |||||||| |||||
Sbjct: 996  aatgggaagaaattgcacgct 1016



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>dbj|AK100086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003B15, full
            insert sequence
          Length = 1922

 Score =  644 bits (325), Expect = 0.0
 Identities = 548/621 (88%), Gaps = 1/621 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gccgactacatctcgctcggcatcagggnagcccgtctacgaggtggtagaagtgaaagc 61
            |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||| |
Sbjct: 566  gccgactacatctcgctcggcatcaggg-agcccgtctacgaggtgatagaagtaaaatc 624

                                                                        
Query: 62   caatggaagcgtgtctaccgaaaaaataagccgccggcagctactgaaatcaagcggcct 121
             ||||| ||  |||||||| |||||||||||||  |||||||| |||||||||| |||||
Sbjct: 625  taatgggaggatgtctaccaaaaaaataagccggaggcagctattgaaatcaagtggcct 684

                                                                        
Query: 122  ccgtctacgagatacacgaagcgtcgacccatcactatggctaatgaactcaatgccttc 181
            ||| |||||||||||  ||||||| |||||||| |||||||||||||| |||||||| ||
Sbjct: 685  ccgcctacgagataccagaagcgttgacccatcgctatggctaatgaattcaatgccatc 744

                                                                        
Query: 182  cctgctggtacgtgagcaggccatattactcaaccttggttccttgcgagcaattgctat 241
            | ||||||| ||||| || ||||||||| | || ||||||||||||||||||||||||||
Sbjct: 745  cttgctggtccgtgaacaagccatattagtaaatcttggttccttgcgagcaattgctat 804

                                                                        
Query: 242  gcatgagcgtgtccttatattcaattataacagcccaggaggaaaggcctttttagagct 301
            |||||| || || |||||||||||||| ||||||||||||||||||||||| |||||   
Sbjct: 805  gcatgaacgcgttcttatattcaattacaacagcccaggaggaaaggccttcttagattc 864

                                                                        
Query: 302  attacgaccccggttaaatccaaggaacatcaatggtgggcctgcgatgccttttcaact 361
            |||||  || |||||||||||||| || ||||||||||| || || ||||| ||||||||
Sbjct: 865  attactgccacggttaaatccaagaaatatcaatggtggaccagcaatgccatttcaact 924

                                                                        
Query: 362  cgaggttgttgaagcagcactgctttctagaatacaaaggctggaacaaagattaatgca 421
             |||||||| ||||| || ||||||||||||||||||||| |||| | |||  |||||| 
Sbjct: 925  tgaggttgtcgaagctgccctgctttctagaatacaaaggttggagcgaaggctaatgcg 984

                                                                        
Query: 422  tgtcgaacctcgtgtggctgcattgcttgaagttctaccaaatcggctgacaggtgatgt 481
            | |||| |||||||||| ||| |||||||||||||||||||||||| |||||| ||||||
Sbjct: 985  tatcgagcctcgtgtgggtgctttgcttgaagttctaccaaatcggttgacagctgatgt 1044

                                                                        
Query: 482  tttggagcagcttcgtctaagcaaacaatcattggtcgagctgggttcacgagcaggtga 541
             ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 1045 gttggagcagcttcgtctaagcaaacaagcattggttgagctgggttcacgagcaggtga 1104

                                                                        
Query: 542  tcttaaacaaatgctcatcgatctcctagaagacccccatgaaattcgtcgaatatgcat 601
            ||| ||||||||||| || ||||||||||| || || |||||||| ||||||||||||||
Sbjct: 1105 tctcaaacaaatgcttattgatctcctagatgatcctcatgaaatccgtcgaatatgcat 1164

                                 
Query: 602  tatggggagaaattgtacgct 622
             ||||| |||||||| |||||
Sbjct: 1165 aatgggaagaaattgcacgct 1185



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                            
Query: 519      gagctgggttcacgagcaggtgatcttaaacaaatgctcatcgatctcctagaagacccc 578
                |||||||||||||||||||||||||| ||||||||||| || ||||||||||| || || 
Sbjct: 27000410 gagctgggttcacgagcaggtgatctcaaacaaatgcttattgatctcctagatgatcct 27000469

                                                            
Query: 579      catgaaattcgtcgaatatgcattatggggagaaattgtacgct 622
                |||||||| |||||||||||||| ||||| |||||||| |||||
Sbjct: 27000470 catgaaatccgtcgaatatgcataatgggaagaaattgcacgct 27000513



 Score =  117 bits (59), Expect = 5e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                            
Query: 435      gtggctgcattgcttgaagttctaccaaatcggctgacaggtgatgttttggagcagctt 494
                |||| ||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||
Sbjct: 27000250 gtgggtgctttgcttgaagttctaccaaatcggttgacagctgatgtgttggagcagctt 27000309

                                       
Query: 495      cgtctaagcaaacaatcattggt 517
                ||||||||||||||| |||||||
Sbjct: 27000310 cgtctaagcaaacaagcattggt 27000332



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                            
Query: 192      cgtgagcaggccatattactcaaccttggttccttgcgagcaattgctatgcatgagcgt 251
                ||||| || ||||||||| | || |||||||||||||||||||||||||||||||| || 
Sbjct: 26998728 cgtgaacaagccatattagtaaatcttggttccttgcgagcaattgctatgcatgaacgc 26998787

                                       
Query: 252      gtccttatattcaattataacag 274
                || |||||||||||||| |||||
Sbjct: 26998788 gttcttatattcaattacaacag 26998810



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                            
Query: 117      ggcctccgtctacgagatacacgaagcgtcgacccatcactatggctaatgaactcaatg 176
                |||||||| |||||||||||  ||||||| |||||||| |||||||||||||| ||||||
Sbjct: 26998118 ggcctccgcctacgagataccagaagcgttgacccatcgctatggctaatgaattcaatg 26998177

                               
Query: 177      ccttccctgctggta 191
                || ||| ||||||||
Sbjct: 26998178 ccatccttgctggta 26998192



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                            
Query: 273      agcccaggaggaaaggcctttttagagctattacgaccccggttaaatccaaggaacatc 332
                |||||||||||||||||||| |||||   |||||  || |||||||||||||| || |||
Sbjct: 26998909 agcccaggaggaaaggccttcttagattcattactgccacggttaaatccaagaaatatc 26998968

                                                   
Query: 333      aatggtgggcctgcgatgccttttcaactcgaggt 367
                |||||||| || || ||||| |||||||| |||||
Sbjct: 26998969 aatggtggaccagcaatgccatttcaacttgaggt 26999003



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 44/45 (97%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                             
Query: 2        gccgactacatctcgctcggcatcagggnagcccgtctacgaggt 46
                |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 26997056 gccgactacatctcgctcggcatcaggg-agcccgtctacgaggt 26997099



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                            
Query: 364      aggttgttgaagcagcactgctttctagaatacaaaggctggaacaaagattaatgcatg 423
                ||||||| ||||| || ||||||||||||||||||||| |||| | |||  |||||| | 
Sbjct: 26999448 aggttgtcgaagctgccctgctttctagaatacaaaggttggagcgaaggctaatgcgta 26999507

                              
Query: 424      tcgaacctcgtgtg 437
                |||| |||||||||
Sbjct: 26999508 tcgagcctcgtgtg 26999521



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                            
Query: 43       aggtggtagaagtgaaagccaatggaagcgtgtctaccgaaaaaataagccgccggcagc 102
                ||||| ||||||| ||| | ||||| ||  |||||||| |||||||||||||  ||||||
Sbjct: 26997843 aggtgatagaagtaaaatctaatgggaggatgtctaccaaaaaaataagccggaggcagc 26997902

                             
Query: 103      tactgaaatcaag 115
                || ||||||||||
Sbjct: 26997903 tattgaaatcaag 26997915



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Plus

                                                                            
Query: 519      gagctgggttcacgagcaggtgatcttaaacaaatgctcatcgatctcctagaagacccc 578
                |||||||||||||||||||||||||| ||||||||||| || ||||||||||| || || 
Sbjct: 27091733 gagctgggttcacgagcaggtgatctcaaacaaatgcttattgatctcctagatgatcct 27091792

                                                            
Query: 579      catgaaattcgtcgaatatgcattatggggagaaattgtacgct 622
                |||||||| |||||||||||||| ||||| |||||||| |||||
Sbjct: 27091793 catgaaatccgtcgaatatgcataatgggaagaaattgcacgct 27091836



 Score =  117 bits (59), Expect = 5e-23
 Identities = 77/83 (92%)
 Strand = Plus / Plus

                                                                            
Query: 435      gtggctgcattgcttgaagttctaccaaatcggctgacaggtgatgttttggagcagctt 494
                |||| ||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||
Sbjct: 27091573 gtgggtgctttgcttgaagttctaccaaatcggttgacagctgatgtgttggagcagctt 27091632

                                       
Query: 495      cgtctaagcaaacaatcattggt 517
                ||||||||||||||| |||||||
Sbjct: 27091633 cgtctaagcaaacaagcattggt 27091655



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                            
Query: 192      cgtgagcaggccatattactcaaccttggttccttgcgagcaattgctatgcatgagcgt 251
                ||||| || ||||||||| | || |||||||||||||||||||||||||||||||| || 
Sbjct: 27090051 cgtgaacaagccatattagtaaatcttggttccttgcgagcaattgctatgcatgaacgc 27090110

                                       
Query: 252      gtccttatattcaattataacag 274
                || |||||||||||||| |||||
Sbjct: 27090111 gttcttatattcaattacaacag 27090133



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Plus

                                                                            
Query: 117      ggcctccgtctacgagatacacgaagcgtcgacccatcactatggctaatgaactcaatg 176
                |||||||| |||||||||||  ||||||| |||||||| |||||||||||||| ||||||
Sbjct: 27089441 ggcctccgcctacgagataccagaagcgttgacccatcgctatggctaatgaattcaatg 27089500

                               
Query: 177      ccttccctgctggta 191
                || ||| ||||||||
Sbjct: 27089501 ccatccttgctggta 27089515



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Plus

                                                                            
Query: 273      agcccaggaggaaaggcctttttagagctattacgaccccggttaaatccaaggaacatc 332
                |||||||||||||||||||| |||||   |||||  || |||||||||||||| || |||
Sbjct: 27090232 agcccaggaggaaaggccttcttagattcattactgccacggttaaatccaagaaatatc 27090291

                                                   
Query: 333      aatggtgggcctgcgatgccttttcaactcgaggt 367
                |||||||| || || ||||| |||||||| |||||
Sbjct: 27090292 aatggtggaccagcaatgccatttcaacttgaggt 27090326



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 44/45 (97%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                             
Query: 2        gccgactacatctcgctcggcatcagggnagcccgtctacgaggt 46
                |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 27088379 gccgactacatctcgctcggcatcaggg-agcccgtctacgaggt 27088422



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                            
Query: 364      aggttgttgaagcagcactgctttctagaatacaaaggctggaacaaagattaatgcatg 423
                ||||||| ||||| || ||||||||||||||||||||| |||| | |||  |||||| | 
Sbjct: 27090771 aggttgtcgaagctgccctgctttctagaatacaaaggttggagcgaaggctaatgcgta 27090830

                              
Query: 424      tcgaacctcgtgtg 437
                |||| |||||||||
Sbjct: 27090831 tcgagcctcgtgtg 27090844



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 62/73 (84%)
 Strand = Plus / Plus

                                                                            
Query: 43       aggtggtagaagtgaaagccaatggaagcgtgtctaccgaaaaaataagccgccggcagc 102
                ||||| ||||||| ||| | ||||| ||  |||||||| |||||||||||||  ||||||
Sbjct: 27089166 aggtgatagaagtaaaatctaatgggaggatgtctaccaaaaaaataagccggaggcagc 27089225

                             
Query: 103      tactgaaatcaag 115
                || ||||||||||
Sbjct: 27089226 tattgaaatcaag 27089238



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>gb|AC087851.4|AC087851 Oryza sativa chromosome 3 BAC OSJNBb0072E24 genomic sequence, complete
             sequence
          Length = 111882

 Score =  127 bits (64), Expect = 5e-26
 Identities = 94/104 (90%)
 Strand = Plus / Minus

                                                                         
Query: 519   gagctgggttcacgagcaggtgatcttaaacaaatgctcatcgatctcctagaagacccc 578
             |||||||||||||||||||||||||| ||||||||||| || ||||||||||| || || 
Sbjct: 58989 gagctgggttcacgagcaggtgatctcaaacaaatgcttattgatctcctagatgatcct 58930

                                                         
Query: 579   catgaaattcgtcgaatatgcattatggggagaaattgtacgct 622
             |||||||| |||||||||||||| ||||| |||||||| |||||
Sbjct: 58929 catgaaatccgtcgaatatgcataatgggaagaaattgcacgct 58886



 Score =  117 bits (59), Expect = 5e-23
 Identities = 77/83 (92%)
 Strand = Plus / Minus

                                                                         
Query: 435   gtggctgcattgcttgaagttctaccaaatcggctgacaggtgatgttttggagcagctt 494
             |||| ||| |||||||||||||||||||||||| |||||| |||||| ||||||||||||
Sbjct: 59149 gtgggtgctttgcttgaagttctaccaaatcggttgacagctgatgtgttggagcagctt 59090

                                    
Query: 495   cgtctaagcaaacaatcattggt 517
             ||||||||||||||| |||||||
Sbjct: 59089 cgtctaagcaaacaagcattggt 59067



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 192   cgtgagcaggccatattactcaaccttggttccttgcgagcaattgctatgcatgagcgt 251
             ||||| || ||||||||| | || |||||||||||||||||||||||||||||||| || 
Sbjct: 60671 cgtgaacaagccatattagtaaatcttggttccttgcgagcaattgctatgcatgaacgc 60612

                                    
Query: 252   gtccttatattcaattataacag 274
             || |||||||||||||| |||||
Sbjct: 60611 gttcttatattcaattacaacag 60589



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 67/75 (89%)
 Strand = Plus / Minus

                                                                         
Query: 117   ggcctccgtctacgagatacacgaagcgtcgacccatcactatggctaatgaactcaatg 176
             |||||||| |||||||||||  ||||||| |||||||| |||||||||||||| ||||||
Sbjct: 61281 ggcctccgcctacgagataccagaagcgttgacccatcgctatggctaatgaattcaatg 61222

                            
Query: 177   ccttccctgctggta 191
             || ||| ||||||||
Sbjct: 61221 ccatccttgctggta 61207



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                         
Query: 273   agcccaggaggaaaggcctttttagagctattacgaccccggttaaatccaaggaacatc 332
             |||||||||||||||||||| |||||   |||||  || |||||||||||||| || |||
Sbjct: 60490 agcccaggaggaaaggccttcttagattcattactgccacggttaaatccaagaaatatc 60431

                                                
Query: 333   aatggtgggcctgcgatgccttttcaactcgaggt 367
             |||||||| || || ||||| |||||||| |||||
Sbjct: 60430 aatggtggaccagcaatgccatttcaacttgaggt 60396



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 44/45 (97%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                          
Query: 2     gccgactacatctcgctcggcatcagggnagcccgtctacgaggt 46
             |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 62343 gccgactacatctcgctcggcatcaggg-agcccgtctacgaggt 62300



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                         
Query: 364   aggttgttgaagcagcactgctttctagaatacaaaggctggaacaaagattaatgcatg 423
             ||||||| ||||| || ||||||||||||||||||||| |||| | |||  |||||| | 
Sbjct: 59951 aggttgtcgaagctgccctgctttctagaatacaaaggttggagcgaaggctaatgcgta 59892

                           
Query: 424   tcgaacctcgtgtg 437
             |||| |||||||||
Sbjct: 59891 tcgagcctcgtgtg 59878



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 62/73 (84%)
 Strand = Plus / Minus

                                                                         
Query: 43    aggtggtagaagtgaaagccaatggaagcgtgtctaccgaaaaaataagccgccggcagc 102
             ||||| ||||||| ||| | ||||| ||  |||||||| |||||||||||||  ||||||
Sbjct: 61556 aggtgatagaagtaaaatctaatgggaggatgtctaccaaaaaaataagccggaggcagc 61497

                          
Query: 103   tactgaaatcaag 115
             || ||||||||||
Sbjct: 61496 tattgaaatcaag 61484



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>ref|NM_122188.2| Arabidopsis thaliana GMN10 AT5G22830 (GMN10) mRNA, complete cds
          Length = 2058

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                       
Query: 542 tcttaaacaaatgctcatcgatctcctagaagacccccatgaaattcgtcgaatatgcat 601
           ||||| |||||||||| | |||||  |||| || ||||||||||| || || ||||||||
Sbjct: 917 tcttagacaaatgctcctggatcttttagaggatccccatgaaatacgccgcatatgcat 976

                          
Query: 602 tatggggagaaattg 616
            ||||| ||||||||
Sbjct: 977 catgggaagaaattg 991



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>gb|AF322255.1|AF322255 Arabidopsis thaliana magnesium transporter protein (GMN10) mRNA,
           complete cds
          Length = 1672

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                       
Query: 542 tcttaaacaaatgctcatcgatctcctagaagacccccatgaaattcgtcgaatatgcat 601
           ||||| |||||||||| | |||||  |||| || ||||||||||| || || ||||||||
Sbjct: 906 tcttagacaaatgctcctggatcttttagaggatccccatgaaatacgccgcatatgcat 965

                          
Query: 602 tatggggagaaattg 616
            ||||| ||||||||
Sbjct: 966 catgggaagaaattg 980



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>dbj|AB005243.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MRN17
          Length = 86065

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                         
Query: 542   tcttaaacaaatgctcatcgatctcctagaagacccccatgaaattcgtcgaatatgcat 601
             ||||| |||||||||| | |||||  |||| || ||||||||||| || || ||||||||
Sbjct: 24065 tcttagacaaatgctcctggatcttttagaggatccccatgaaatacgccgcatatgcat 24124

                            
Query: 602   tatggggagaaattg 616
              ||||| ||||||||
Sbjct: 24125 catgggaagaaattg 24139



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>emb|BX831579.1|CNS09ZTT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH16ZE02 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1761

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 71/86 (82%)
 Strand = Plus / Plus

                                                                        
Query: 531  cgagcaggtgatcttaaacaaatgctcatcgatctcctagaagacccccatgaaattcgt 590
            ||||| || ||| ||| |||||||||| | |||||  |||| || ||||||||||| || 
Sbjct: 1024 cgagctggagatattagacaaatgctcctggatcttttagaggatccccatgaaatacgc 1083

                                      
Query: 591  cgaatatgcattatggggagaaattg 616
            || |||||||| ||||| ||||||||
Sbjct: 1084 cgcatatgcatcatgggaagaaattg 1109



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>emb|BX815432.1|CNS0ABBE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS5ZE02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1734

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 64/76 (84%), Gaps = 1/76 (1%)
 Strand = Plus / Plus

                                                                       
Query: 542 tcttaaacaaatgctcatcgatctcctagaaga-cccccatgaaattcgtcgaatatgca 600
           ||||| |||||||||| | |||||  |||| || |||||||||||| || || |||||||
Sbjct: 919 tcttagacaaatgctcctggatcttttagaggatcccccatgaaatacgccgcatatgca 978

                           
Query: 601 ttatggggagaaattg 616
           | ||||| ||||||||
Sbjct: 979 tcatgggaagaaattg 994



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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 577     cccatgaaattcgtcgaatat 597
               |||||||||||||||||||||
Sbjct: 1384658 cccatgaaattcgtcgaatat 1384678



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>emb|AL353736.11| Human DNA sequence from clone RP11-412P1 on chromosome 9 Contains the 3'
              end of the CDK5RAP2 gene for CDK5 regulatory subunit
              associated protein 2 (C48), complete sequence
          Length = 148875

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 395    acaaaggctggaacaaagatt 415
              |||||||||||||||||||||
Sbjct: 130581 acaaaggctggaacaaagatt 130601



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>ref|XM_417195.1| PREDICTED: Gallus gallus similar to hypothetical protein
           (LOC419001), mRNA
          Length = 1316

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 51  gaagtgaaagccaatggaag 70
           ||||||||||||||||||||
Sbjct: 660 gaagtgaaagccaatggaag 679



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>gb|AE013116.1| Thermoanaerobacter tengcongensis MB4, section 143 of 244 of the
            complete genome
          Length = 6429

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 398  aaggctggaacaaagattaa 417
            ||||||||||||||||||||
Sbjct: 1483 aaggctggaacaaagattaa 1464



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>gb|AC122245.5| Mus musculus BAC clone RP23-151P21 from 18, complete sequence
          Length = 191988

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   gttaaatccaaggaacatca 333
             ||||||||||||||||||||
Sbjct: 99657 gttaaatccaaggaacatca 99676



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>gb|AC103758.14| Homo sapiens chromosome 8, clone CTD-3135A9, complete sequence
          Length = 235357

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   gctatgcatgagcgtgtcct 256
             ||||||||||||||||||||
Sbjct: 42165 gctatgcatgagcgtgtcct 42146



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>emb|AJ621740.1| Gallus gallus GMCSF gene for granulocyte-macrophage colony-stimulating
             factor and IL3 gene for interleukin-3, BAC bCHORI92M14
             clone, contig 1
          Length = 54760

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   aggaggaaaggcctttttag 297
             ||||||||||||||||||||
Sbjct: 26939 aggaggaaaggcctttttag 26920



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>emb|BX935153.1| Gallus gallus finished cDNA, clone ChEST535d16
          Length = 1324

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 51  gaagtgaaagccaatggaag 70
           ||||||||||||||||||||
Sbjct: 668 gaagtgaaagccaatggaag 687



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>emb|BX931867.1| Gallus gallus finished cDNA, clone ChEST795o24
          Length = 985

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 51  gaagtgaaagccaatggaag 70
           ||||||||||||||||||||
Sbjct: 668 gaagtgaaagccaatggaag 687



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>emb|BX930440.1| Gallus gallus finished cDNA, clone ChEST635j1
          Length = 670

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 51 gaagtgaaagccaatggaag 70
          ||||||||||||||||||||
Sbjct: 14 gaagtgaaagccaatggaag 33



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>emb|BX682229.4| Mouse DNA sequence from clone RP24-531M17 on chromosome 2, complete
             sequence
          Length = 57881

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 433   gtgtggctgcattgcttgaa 452
             ||||||||||||||||||||
Sbjct: 45917 gtgtggctgcattgcttgaa 45936



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>emb|AL772306.10| Mouse DNA sequence from clone RP23-89L15 on chromosome 4, complete
              sequence
          Length = 210648

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 229    gagcaattgctatgcatgag 248
              ||||||||||||||||||||
Sbjct: 144419 gagcaattgctatgcatgag 144438



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>gb|AC154673.2| Mus musculus BAC clone RP24-298M20 from chromosome 17, complete
             sequence
          Length = 157621

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 369   gttgaagcagcactgctttctaga 392
             |||||| |||||||||||||||||
Sbjct: 48553 gttgaaccagcactgctttctaga 48576


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,725,350
Number of Sequences: 3902068
Number of extensions: 4725350
Number of successful extensions: 76568
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76455
Number of HSP's gapped (non-prelim): 108
length of query: 649
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 626
effective length of database: 17,143,297,704
effective search space: 10731704362704
effective search space used: 10731704362704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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