ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal39g19 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 418 bits (1074), Expect = e-117 Identities = 202/203 (99%), Positives = 202/203 (99%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL Sbjct: 108 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 167 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM Sbjct: 168 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 227 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNK ENPRVPIVVTGNDFSTLYAPLIRD Sbjct: 228 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRD 287 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRMEKFYWAPTRDDRIGVCKGIF Sbjct: 288 GRMEKFYWAPTRDDRIGVCKGIF 310
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 403 bits (1036), Expect = e-112 Identities = 193/203 (95%), Positives = 200/203 (98%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 GLR YDFDNTMGGFYIAP+FMDKLVVH+SKNFMTLPNIK+PLILGIWGGKGQGKSFQCEL Sbjct: 109 GLRTYDFDNTMGGFYIAPSFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 168 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 VFAKMGINPIMMSAGELESGN GEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRM Sbjct: 169 VFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRM 227 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRD Sbjct: 228 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRD 287 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRMEKFYWAPTRDDR+GVCKGIF Sbjct: 288 GRMEKFYWAPTRDDRVGVCKGIF 310
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 401 bits (1031), Expect = e-112 Identities = 193/203 (95%), Positives = 199/203 (98%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 GLRKYDFDNTM G YIAPAFMDKL+VHL+KNFMTLPNIK+PLILGIWGGKGQGKSFQCEL Sbjct: 106 GLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 165 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 VFAKMGINPIMMSAGELESGN GEPAKLIRQRYREAAD+I KGKMCCLFINDLDAGAGRM Sbjct: 166 VFAKMGINPIMMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRM 224 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRD Sbjct: 225 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRD 284 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRMEKFYWAPTR+DRIGVCKGIF Sbjct: 285 GRMEKFYWAPTREDRIGVCKGIF 307
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 399 bits (1025), Expect = e-111 Identities = 190/203 (93%), Positives = 199/203 (98%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 GLR+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCEL Sbjct: 118 GLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCEL 177 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRM Sbjct: 178 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRM 237 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRD Sbjct: 238 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRD 297 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRMEKFYWAPTR+DRIGVCKGIF Sbjct: 298 GRMEKFYWAPTREDRIGVCKGIF 320
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 399 bits (1025), Expect = e-111 Identities = 190/203 (93%), Positives = 199/203 (98%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 GLR+Y+ DN M GFYIAPAFMDKLVVH++KNF++LPNIKIPLILGIWGGKGQGKSFQCEL Sbjct: 118 GLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCEL 177 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRM Sbjct: 178 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRM 237 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRD Sbjct: 238 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRD 297 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRMEKFYWAPTR+DRIGVCKGIF Sbjct: 298 GRMEKFYWAPTREDRIGVCKGIF 320
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 393 bits (1009), Expect = e-109 Identities = 187/203 (92%), Positives = 196/203 (96%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 GLR+Y+ DN M GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILGIWGGKGQGKSFQCEL Sbjct: 118 GLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCEL 177 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 V AKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRM Sbjct: 178 VMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRM 237 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPI+ TGNDFSTLYAPLIRD Sbjct: 238 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRD 297 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRMEKFYWAPTR+DRIGVCKGIF Sbjct: 298 GRMEKFYWAPTREDRIGVCKGIF 320
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 390 bits (1003), Expect = e-108 Identities = 183/203 (90%), Positives = 195/203 (96%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 GLR Y +DN + GFYIAPAFMDKL VH+ KNF+TLPNIK+PLILG+WGGKGQGKSFQCEL Sbjct: 115 GLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCEL 174 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGR+ Sbjct: 175 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRL 234 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRD Sbjct: 235 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRD 294 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRM+KFYWAPTR+DRIG+C GIF Sbjct: 295 GRMDKFYWAPTREDRIGICTGIF 317
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 389 bits (1000), Expect = e-108 Identities = 184/203 (90%), Positives = 197/203 (97%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 GLR+Y+FDN GFYIAPAF+DKLVVH++KNFMTLPNIK+PLILG+WGGKGQGKSFQCEL Sbjct: 122 GLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCEL 181 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA+D+IKKGKMC LFINDLDAGAGR+ Sbjct: 182 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMCVLFINDLDAGAGRL 241 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+N RVPI+VTGNDFSTLYAPLIRD Sbjct: 242 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRD 301 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRMEKFYWAPTR+DRIGVCKGIF Sbjct: 302 GRMEKFYWAPTREDRIGVCKGIF 324
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 389 bits (998), Expect = e-108 Identities = 186/203 (91%), Positives = 194/203 (95%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 G + Y+FDN M GFYIA FMDKLVVHLSKNFMTLPNIK+PLILGIWGGKGQGKSFQCEL Sbjct: 114 GQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 173 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 VFAKMGI PIMMSAGELESGNAGEPAKLIRQRYREA+D+IKKGKM CLFINDLDAGAGRM Sbjct: 174 VFAKMGITPIMMSAGELESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRM 233 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRD Sbjct: 234 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRD 293 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRMEKFYWAPTR+DRIGVCKGIF Sbjct: 294 GRMEKFYWAPTREDRIGVCKGIF 316
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 387 bits (995), Expect = e-107 Identities = 184/203 (90%), Positives = 197/203 (97%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 GLR+Y+FDN M G+YIAPAFMDKLVVH++KNFMTLPN+K+PLILGIWGGKGQGKSFQCEL Sbjct: 118 GLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCEL 177 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 VFAKM I+PIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKMC LFINDLDAGAGR+ Sbjct: 178 VFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRL 237 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRD Sbjct: 238 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRD 297 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRMEKFYWAPTR+DRIGVC GIF Sbjct: 298 GRMEKFYWAPTREDRIGVCIGIF 320
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 385 bits (988), Expect = e-107 Identities = 180/203 (88%), Positives = 196/203 (96%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 GLR+Y+ DNT+ GFYIAP+FMDKLVVH++KNF+ LPNIK+PLILG+WGGKGQGKSFQCEL Sbjct: 122 GLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCEL 181 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 VF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I+KG +CCLFINDLDAGAGRM Sbjct: 182 VFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNICCLFINDLDAGAGRM 241 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRD Sbjct: 242 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRD 301 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRMEKFYWAPTR+DRIGVCKGIF Sbjct: 302 GRMEKFYWAPTREDRIGVCKGIF 324
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 383 bits (984), Expect = e-106 Identities = 181/203 (89%), Positives = 194/203 (95%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 GLR+Y+ DN + GFYIAPAFMDKLVVH++KNF+ LPNIK+PLILGIWGGKGQGKSFQCEL Sbjct: 122 GLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCEL 181 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 VF KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I+KG MCCLFINDLDAGAGRM Sbjct: 182 VFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRM 241 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRD Sbjct: 242 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRD 301 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRMEKFYWAPTR+DRIGVC GIF Sbjct: 302 GRMEKFYWAPTREDRIGVCTGIF 324
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 383 bits (983), Expect = e-106 Identities = 180/202 (89%), Positives = 193/202 (95%) Frame = +1 Query: 25 LRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELV 204 L+ Y DN + GFYIAPAFMDKLVVH++KNF+TLPNIK+PLILG+WGGKGQGKSFQCELV Sbjct: 118 LKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELV 177 Query: 205 FAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMG 384 F KMGINPIMMSAGELESGNAGEPAKLIRQRYREAA++I+KG MCCLFINDLDAGAGRMG Sbjct: 178 FRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMG 237 Query: 385 GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDG 564 GTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDG Sbjct: 238 GTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDG 297 Query: 565 RMEKFYWAPTRDDRIGVCKGIF 630 RMEKFYWAPTR+DRIGVCKGIF Sbjct: 298 RMEKFYWAPTREDRIGVCKGIF 319
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 382 bits (982), Expect = e-106 Identities = 181/203 (89%), Positives = 193/203 (95%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 GLRKYD DN +G FYIAPAFMDKLVVH++KNF+ LPNIKIPLILG+WGGKGQGKSFQCEL Sbjct: 116 GLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCEL 175 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 VFAK+GINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC LFINDL+ GAGRM Sbjct: 176 VFAKLGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRM 235 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK++N RVPI+VTGNDFSTLYAPLIRD Sbjct: 236 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRD 295 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRMEKFYWAPTR+DRIGVC GIF Sbjct: 296 GRMEKFYWAPTREDRIGVCTGIF 318
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 381 bits (978), Expect = e-105 Identities = 184/203 (90%), Positives = 193/203 (95%) Frame = +1 Query: 22 GLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 201 GLR+ DN GFYIAPAF+DKLVVH++KNFMTLPNIK+PLILGIWGGKGQGKSFQCEL Sbjct: 122 GLRQ--LDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 179 Query: 202 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRM 381 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD+I KGKMC LFINDLDAGAGR+ Sbjct: 180 VFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRL 239 Query: 382 GGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRD 561 GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPI+VTGNDFSTLYAPLIRD Sbjct: 240 GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRD 299 Query: 562 GRMEKFYWAPTRDDRIGVCKGIF 630 GRMEKFYWAPTRDDR+GVCKGIF Sbjct: 300 GRMEKFYWAPTRDDRVGVCKGIF 322
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 338 bits (867), Expect = 8e-93 Identities = 159/197 (80%), Positives = 177/197 (89%) Frame = +1 Query: 40 FDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMG 219 F+N GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L + K+G Sbjct: 97 FNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLG 156 Query: 220 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 399 I PI+MSAGELESGNAGEPAKLIR RYREA+D+IKKG+MC LFINDLDAGAGRMG TTQY Sbjct: 157 IAPIVMSAGELESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQY 216 Query: 400 TVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKF 579 TVNNQMVNATLMNIAD PTNVQLPG+Y EE PRVPIV TGNDFSTLYAPLIRDGRMEK+ Sbjct: 217 TVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKY 276 Query: 580 YWAPTRDDRIGVCKGIF 630 YW PTR+DRIGVC GIF Sbjct: 277 YWNPTREDRIGVCMGIF 293
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 276 bits (705), Expect = 5e-74 Identities = 131/191 (68%), Positives = 157/191 (82%), Gaps = 1/191 (0%) Frame = +1 Query: 61 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 240 +YIAP F+DKL VH++KNF+ +P +++PLILGI G KG+GK+FQCEL F KMGI ++S Sbjct: 3 YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLIS 62 Query: 241 AGELESGNAGEPAKLIRQRYREAADMIK-KGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 417 GELES +AG+PA+LIR RYRE A++IK +GKMC L INDLDAGAGR TQYTVN Q+ Sbjct: 63 GGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQL 122 Query: 418 VNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 597 VNATLMNIAD PT+VQLPG Y+ RVPI+VTGNDFSTLYAPLIRDGRMEKFYW P R Sbjct: 123 VNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPNR 182 Query: 598 DDRIGVCKGIF 630 DD++G+ GIF Sbjct: 183 DDKVGIVGGIF 193
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 273 bits (699), Expect = 2e-73 Identities = 130/191 (68%), Positives = 157/191 (82%), Gaps = 1/191 (0%) Frame = +1 Query: 61 FYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMS 240 +YIAP F+DKL VH++KNF+ LP +++PLILGI G KG+GK+FQCEL F KMG+ ++S Sbjct: 3 YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLIS 62 Query: 241 AGELESGNAGEPAKLIRQRYREAADMIK-KGKMCCLFINDLDAGAGRMGGTTQYTVNNQM 417 GELES +AG+PA+LIR RYRE A++IK +GKMC L INDLDAGAGR TQYTVN Q+ Sbjct: 63 GGELESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQL 122 Query: 418 VNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 597 VNATLMNIAD PT+VQLPG Y+ RVPI+VTGNDFSTLYAPLIRDGRMEKFYW P R Sbjct: 123 VNATLMNIADNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPHR 182 Query: 598 DDRIGVCKGIF 630 D+++G+ GIF Sbjct: 183 DEKVGIVGGIF 193
>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297| Length = 733 Score = 54.3 bits (129), Expect = 3e-07 Identities = 44/162 (27%), Positives = 74/162 (45%) Frame = +1 Query: 130 NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 309 NIK P + ++G G GK+ + V + N I + EL S GE K +R+ +R+A Sbjct: 485 NIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKA 544 Query: 310 ADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKE 489 + C +F +++D+ A R GG V ++V+ L +L G+ E Sbjct: 545 RQVAP----CVIFFDEIDSLAPRRGGIGDSHVTERVVSQLL---------TELDGL---E 588 Query: 490 ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGV 615 E V ++ N + L+R GR+E+ + P D + V Sbjct: 589 ELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARV 630
>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4| Length = 388 Score = 48.9 bits (115), Expect = 1e-05 Identities = 37/148 (25%), Positives = 72/148 (48%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 IK P + ++G G GK+ V A +G+N + + + + GE A++IR+ + A Sbjct: 163 IKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYA- 221 Query: 313 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEE 492 K+ + C +F++++DA GR ++ T ++ + TLM + + G Sbjct: 222 ---KEHEPCVIFMDEIDAIGGRR--FSEGTSADREIQRTLMELLNQMDGFDYLG------ 270 Query: 493 NPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 + I++ N TL L+R GR+++ Sbjct: 271 --QTKIIMATNRPDTLDPALLRPGRLDR 296
>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase domain protein 44) (CADp44) Length = 389 Score = 45.8 bits (107), Expect = 1e-04 Identities = 35/140 (25%), Positives = 70/140 (50%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 337 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 516 C +F++++DA GR ++ T ++ + TLM + + Q+ G + RV +++ Sbjct: 228 CIIFMDEIDAIGGRR--FSEGTSADREIQRTLMELLN-----QMDGF---DTLHRVKMIM 277 Query: 517 TGNDFSTLYAPLIRDGRMEK 576 N TL L+R GR+++ Sbjct: 278 ATNRPDTLDPALLRPGRLDR 297
>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 45.8 bits (107), Expect = 1e-04 Identities = 35/140 (25%), Positives = 70/140 (50%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 337 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 516 C +F++++DA GR ++ T ++ + TLM + + Q+ G + RV +++ Sbjct: 228 CIIFMDEIDAIGGRR--FSEGTSADREIQRTLMELLN-----QMDGF---DTLHRVKMIM 277 Query: 517 TGNDFSTLYAPLIRDGRMEK 576 N TL L+R GR+++ Sbjct: 278 ATNRPDTLDPALLRPGRLDR 297
>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit| p42) (Proteasome 26S subunit ATPase 6) Length = 389 Score = 45.8 bits (107), Expect = 1e-04 Identities = 35/140 (25%), Positives = 70/140 (50%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ V +++ N + + + + GE A+LIR+ + A D + Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227 Query: 337 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 516 C +F++++DA GR ++ T ++ + TLM + + Q+ G + RV +++ Sbjct: 228 CIIFMDEIDAIGGRR--FSEGTSADREIQRTLMELLN-----QMDGF---DTLHRVKMIM 277 Query: 517 TGNDFSTLYAPLIRDGRMEK 576 N TL L+R GR+++ Sbjct: 278 ATNRPDTLDPALLRPGRLDR 297
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 45.4 bits (106), Expect = 1e-04 Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 2/163 (1%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 +K P L ++G G GK+ V + + I++S + +AGE K++R+ + EA+ Sbjct: 53 LKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEAS 112 Query: 313 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEE 492 K +FI+++D R + V TLM+ ++ P++ Sbjct: 113 SHAVSDKPSVIFIDEIDVLCPRRDARREQDVRIASQLFTLMD-SNKPSS----------S 161 Query: 493 NPRVPIVVTGNDFSTLYAPLIRDGRMEKF--YWAPTRDDRIGV 615 PRV +V + N + L R GR + P +DR+ + Sbjct: 162 APRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKI 204
>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome| regulatory subunit 2) Length = 407 Score = 45.1 bits (105), Expect = 2e-04 Identities = 38/143 (26%), Positives = 63/143 (44%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + V ++ + I M+ EL GE AKL+R ++ A D + Sbjct: 190 GPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARD----HEPAV 245 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 522 +FI+++DA A + T T + V T+M + L M +E + I+ Sbjct: 246 VFIDEIDAIASKR--TDSKTSGDAEVQRTMMQL--------LSEMDGFDERGDIRIIAAT 295 Query: 523 NDFSTLYAPLIRDGRMEKFYWAP 591 N F L ++R GR ++ P Sbjct: 296 NRFDMLDRAILRPGRFDRLIEVP 318
>CDCH_HALSA (Q9HPF0) Protein cdcH| Length = 742 Score = 44.3 bits (103), Expect = 3e-04 Identities = 40/152 (26%), Positives = 67/152 (44%) Frame = +1 Query: 121 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 300 T ++ P + ++G G GK+ + V + N I + +L S GE K IRQ + Sbjct: 489 TRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTF 548 Query: 301 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 R+A + +F ++LD+ A G T V+ ++VN L +L G+ Sbjct: 549 RKARQVAP----TVIFFDELDSLAPGRGQTGGNNVSERVVNQLL---------TELDGL- 594 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 EE V ++ N + LIR GR ++ Sbjct: 595 --EEMEEVMVIAATNRPDIIDPALIRSGRFDR 624
>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 631 Score = 44.3 bits (103), Expect = 3e-04 Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 1/178 (0%) Frame = +1 Query: 46 NTMGGFYIAPAFMDKLVVHLSK-NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 222 N + G A +++V L K T KIP + + G G GK+ + + + G+ Sbjct: 173 NDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGV 232 Query: 223 NPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 +S E G A +R +++A K+ C +FI+++DA GR GT Sbjct: 233 PFFSISGSEFVEMFVGVGASRVRDLFKKA----KENSPCIVFIDEIDA-VGRQRGTGIGG 287 Query: 403 VNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 N++ + N L M E N + I+ N L A L+R GR ++ Sbjct: 288 GNDE---------REQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDR 336
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 43.5 bits (101), Expect = 5e-04 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 2/157 (1%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ + V + + + + EL GE AKL+R ++ + K+ Sbjct: 187 LYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFK----LAKEKSP 242 Query: 337 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 516 C +FI+++DA A + T T ++ V TLM + L M + V I+ Sbjct: 243 CIIFIDEIDAVASKR--TESLTGGDREVQRTLMQL--------LAEMDGFDSRGDVKIIA 292 Query: 517 TGNDFSTLYAPLIRDGRMEKF--YWAPTRDDRIGVCK 621 N L ++R GR ++ P D R+ + K Sbjct: 293 ATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILK 329
>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1135 Score = 42.0 bits (97), Expect = 0.001 Identities = 36/147 (24%), Positives = 62/147 (42%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + +N + EL + GE +R+ +++A D K C Sbjct: 852 YGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 907 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 +F ++LD+ A + G NQ + +M+ + +L GM E V +V Sbjct: 908 VIFFDELDSVAPKRG--------NQGDSGGVMDRIVSQLLAELDGMSGAEGGDGVFVVGA 959 Query: 520 GNDFSTLYAPLIRDGRMEKFYWAPTRD 600 N L L+R GR +K + D Sbjct: 960 TNRPDLLDEALLRPGRFDKMLYLGIAD 986
>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A| Length = 438 Score = 41.6 bits (96), Expect = 0.002 Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 3/166 (1%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 +K P ++G G GK+ A+ + ++A +L G+ AKL+ R+A Sbjct: 216 VKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLV----RDAF 271 Query: 313 DMIKKGKMCCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKE 489 + K+ +FI++LDA G R ++ V T++ + + QL G Sbjct: 272 ALAKEKSPAIIFIDELDAIGTKRFDSE---KAGDREVQRTMLELLN-----QLDGF---S 320 Query: 490 ENPRVPIVVTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCK 621 + RV ++ N TL L+R GR+++ + P + R+G+ + Sbjct: 321 SDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLPNEEARVGILR 366
>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 628 Score = 41.2 bits (95), Expect = 0.003 Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 1/178 (0%) Frame = +1 Query: 46 NTMGGFYIAPAFMDKLVVHLSK-NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGI 222 N + G A ++V L + T KIP + + G G GK+ + + + G+ Sbjct: 173 NDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGV 232 Query: 223 NPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 +S E G A +R +++A D C +FI+++DA GR GT Sbjct: 233 PFFSISGSEFVEMFVGVGASRVRDLFKKAKD----NAPCIVFIDEIDA-VGRQRGTGVGG 287 Query: 403 VNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 N++ + N L M E N V ++ N L + L+R GR ++ Sbjct: 288 GNDE---------REQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDR 336
>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)| Length = 439 Score = 41.2 bits (95), Expect = 0.003 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 3/161 (1%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 IK P + ++G G GK+ + V + + + EL G+ KL+R+ +R A Sbjct: 215 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 274 Query: 313 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 483 + +FI+++DA GT +Y N+ + + T++ + + QL G + Sbjct: 275 EHAPS----IVFIDEIDA-----VGTKRYDSNSGGEREIQRTMLELLN-----QLDGFDS 320 Query: 484 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 + + V +++ N TL LIR GR+++ P D++ Sbjct: 321 RGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 358
>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 40.8 bits (94), Expect = 0.003 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 3/161 (1%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 IK P + ++G G GK+ + V + + + EL G+ KL+R+ +R A Sbjct: 216 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275 Query: 313 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 483 + +FI+++DA GT +Y N+ + + T++ + + QL G + Sbjct: 276 EHAPS----IVFIDEIDA-----IGTKRYDSNSGGEREIQRTMLELLN-----QLDGFDS 321 Query: 484 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 + + V +++ N TL LIR GR+++ P D++ Sbjct: 322 RGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 40.8 bits (94), Expect = 0.003 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 3/161 (1%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 IK P + ++G G GK+ + V + + + EL G+ KL+R+ +R A Sbjct: 216 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275 Query: 313 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 483 + +FI+++DA GT +Y N+ + + T++ + + QL G + Sbjct: 276 EHAPS----IVFIDEIDA-----IGTKRYDSNSGGEREIQRTMLELLN-----QLDGFDS 321 Query: 484 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 + + V +++ N TL LIR GR+++ P D++ Sbjct: 322 RGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 40.8 bits (94), Expect = 0.003 Identities = 39/161 (24%), Positives = 75/161 (46%), Gaps = 3/161 (1%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 IK P + ++G G GK+ + V + + + EL G+ KL+R+ +R A Sbjct: 216 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAE 275 Query: 313 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 483 + +FI+++DA GT +Y N+ + + T++ + + QL G + Sbjct: 276 EHAPS----IVFIDEIDA-----IGTKRYDSNSGGEREIQRTMLELLN-----QLDGFDS 321 Query: 484 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 + + V +++ N TL LIR GR+++ P D++ Sbjct: 322 RGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1157 Score = 40.4 bits (93), Expect = 0.004 Identities = 40/163 (24%), Positives = 71/163 (43%), Gaps = 6/163 (3%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ V A+ G+N I + E+ + G + +R+ + A + K Sbjct: 838 LYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERA----QAAKP 893 Query: 337 CCLFINDLDAGAGRMG----GTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRV 504 C LF ++ D+ A + G G T VN + T M+ A+ L G+Y R Sbjct: 894 CILFFDEFDSIAPKRGHDSTGVTDRVVNQML---TQMDGAEG-----LDGVYVLAATSRP 945 Query: 505 PIVVTGNDFSTLYAPLIRDGRMEKFYWA--PTRDDRIGVCKGI 627 ++ + L+R GR++K P DDR+ + + + Sbjct: 946 DLIDSA---------LLRPGRLDKSVICDMPDFDDRLDILQSV 979
>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome| regulatory subunit 1) Length = 411 Score = 40.4 bits (93), Expect = 0.004 Identities = 34/143 (23%), Positives = 63/143 (44%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + V + + I M+ EL GE ++L+R + ++ ++ Sbjct: 193 GPPGTGKTMLAKAVANQTDASFIKMAGSELVRKFIGEGSRLVRDLF----ELAEQKDPAI 248 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 522 +FI+++DA A + T T + V T+M + L M +E + I+ Sbjct: 249 IFIDEIDAVAAKR--TDSKTSGDAEVQRTMMQL--------LSEMDGFDERGDIRIIAAT 298 Query: 523 NDFSTLYAPLIRDGRMEKFYWAP 591 N F L + ++R GR ++ P Sbjct: 299 NRFDMLDSAILRPGRFDRLIEVP 321
>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 429 Score = 40.4 bits (93), Expect = 0.004 Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 1/149 (0%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 I+ P + ++G G GK+ A+ + ++ +L G+ AKL+ R+A Sbjct: 207 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 262 Query: 313 DMIKKGKMCCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKE 489 + K+ C +FI+++DA G R ++ V T++ + + QL G + E Sbjct: 263 QLAKEKSPCIIFIDEIDAIGTKRFDSEVS---GDREVQRTMLELLN-----QLDGFSSDE 314 Query: 490 ENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 R+ ++ N L L+R GR+++ Sbjct: 315 ---RIKVIAATNRADILDPALMRSGRLDR 340
>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 855 Score = 40.0 bits (92), Expect = 0.006 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 2/157 (1%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + V + G+N I + EL + GE + +RQ ++ A K C Sbjct: 621 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 676 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 522 +F +++DA R +++ A++ + N L M E +V I+ Sbjct: 677 IFFDEVDALCPRR--------SDRETGASVRVV-----NQLLTEMDGLETRQQVFILAAT 723 Query: 523 NDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGI 627 N + ++R GR++K F P DR+ + K I Sbjct: 724 NRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTI 760 Score = 33.5 bits (75), Expect = 0.53 Identities = 19/68 (27%), Positives = 34/68 (50%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + ++ + + ++A E+ SG +GE Q+ RE D C Sbjct: 304 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGES----EQKLRELFDQAVSNAPCI 359 Query: 343 LFINDLDA 366 +FI+++DA Sbjct: 360 VFIDEIDA 367
>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S| subunit ATPase 1) Length = 440 Score = 40.0 bits (92), Expect = 0.006 Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 3/161 (1%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 IK P + ++G G GK+ + V + + + EL G+ KL+R+ +R A Sbjct: 216 IKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA- 274 Query: 313 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 483 ++ +FI+++DA GT +Y N+ + + T++ + + QL G + Sbjct: 275 ---EEHGPSIVFIDEIDA-----IGTKRYDSNSGGEREIQRTMLELLN-----QLDGFDS 321 Query: 484 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 + + V +++ N TL LIR GR+++ P D++ Sbjct: 322 RGD---VKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEK 359
>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 424 Score = 39.7 bits (91), Expect = 0.007 Identities = 33/141 (23%), Positives = 64/141 (45%), Gaps = 1/141 (0%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ A+ + ++ +L G+ AKL+ R+A + K+ Sbjct: 210 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAFQLAKEKAP 265 Query: 337 CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 513 C +FI+++DA G R ++ V T++ + + QL G + E R+ ++ Sbjct: 266 CIIFIDEIDAIGTKRFDSEVS---GDREVQRTMLELLN-----QLDGFSSDE---RIKVI 314 Query: 514 VTGNDFSTLYAPLIRDGRMEK 576 N L L+R GR+++ Sbjct: 315 AATNRADILDPALMRSGRLDR 335
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 39.7 bits (91), Expect = 0.007 Identities = 44/171 (25%), Positives = 65/171 (38%), Gaps = 2/171 (1%) Frame = +1 Query: 94 VVHLSKN--FMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNA 267 VV KN T+ K+P + + G G GK+ V + + S E + Sbjct: 354 VVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFV 413 Query: 268 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD 447 G A IR +REA K C +FI++LD+ G+ + + + Q +N L Sbjct: 414 GVGASRIRNLFREA----KANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAE--- 466 Query: 448 APTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 600 M + N V I+ N L LIR GR + P D Sbjct: 467 ---------MDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPD 508
>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome| biosynthesis protein PAS5) Length = 1165 Score = 39.7 bits (91), Expect = 0.007 Identities = 35/147 (23%), Positives = 61/147 (41%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + +N + EL + GE +R+ ++ A D K C Sbjct: 858 YGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARD----AKPC 913 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 +F ++LD+ A + G NQ + +M+ + +L GM + V +V Sbjct: 914 VVFFDELDSVAPKRG--------NQGDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGA 965 Query: 520 GNDFSTLYAPLIRDGRMEKFYWAPTRD 600 N L L+R GR +K + D Sbjct: 966 TNRPDLLDEALLRPGRFDKMLYLGVSD 992
>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like| protein) (NVLp) Length = 856 Score = 39.7 bits (91), Expect = 0.007 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 2/157 (1%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + V + G+N I + EL + GE + +RQ ++ A K C Sbjct: 622 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 677 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 522 +F +++DA R +++ A++ + N L M E +V I+ Sbjct: 678 IFFDEVDALCPRR--------SDRETGASVRVV-----NQLLTEMDGLEARQQVFIMAAT 724 Query: 523 NDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCKGI 627 N + ++R GR++K F P DR+ + K I Sbjct: 725 NRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTI 761 Score = 33.1 bits (74), Expect = 0.70 Identities = 17/68 (25%), Positives = 36/68 (52%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + ++ + + ++A E+ SG +GE + +R+ + +A C Sbjct: 305 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAV----SNAPCI 360 Query: 343 LFINDLDA 366 +FI+++DA Sbjct: 361 IFIDEIDA 368
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 410 Score = 39.3 bits (90), Expect = 0.010 Identities = 38/145 (26%), Positives = 62/145 (42%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ + V + I + A E GE A+L+R + ++ K+ Sbjct: 190 LYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVF----ELAKEKSP 245 Query: 337 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 516 +FI+++DA A + T ++ V TLM + +L G E V IV Sbjct: 246 SIIFIDEIDAVAAKR--LKSSTSGDREVQRTLMQLL-----AELDGF---ESRGNVGIVA 295 Query: 517 TGNDFSTLYAPLIRDGRMEKFYWAP 591 N L L+R GR ++F P Sbjct: 296 ATNRPDILDPALLRPGRFDRFIEVP 320
>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 627 Score = 39.3 bits (90), Expect = 0.010 Identities = 38/157 (24%), Positives = 63/157 (40%), Gaps = 5/157 (3%) Frame = +1 Query: 121 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 300 T KIP + + G G GK+ + + + G+ +S E G A +R + Sbjct: 198 TAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 257 Query: 301 REAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQ 465 ++A K+ C +FI+++DA GAG GG + + N Sbjct: 258 KKA----KENAPCLIFIDEIDAVGRQRGAGIGGGNDE---------------REQTLNQL 298 Query: 466 LPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 L M E N + I+ N L + L+R GR ++ Sbjct: 299 LTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDR 335
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 39.3 bits (90), Expect = 0.010 Identities = 39/155 (25%), Positives = 59/155 (38%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 K+P + + G G GK+ V + + S E + G A IR +REA Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369 Query: 316 MIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN 495 K C +FI++LD+ G+ + + + Q +N L M + N Sbjct: 370 --KANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAE------------MDGFKPN 415 Query: 496 PRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 600 V I+ N L LIR GR + P D Sbjct: 416 EGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPD 450
>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 420 Score = 38.9 bits (89), Expect = 0.013 Identities = 38/145 (26%), Positives = 66/145 (45%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ + V + I + EL G+ +KL+ RE +M +K Sbjct: 198 LYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLV----REIFEMARKKAP 253 Query: 337 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 516 +FI++LD+ A R T T ++ V TLM + ++ G ++K +N R I+ Sbjct: 254 SIIFIDELDSIAARRLNET--TGADREVQRTLMQLL-----AEMDG-FDKRKNIR--IIA 303 Query: 517 TGNDFSTLYAPLIRDGRMEKFYWAP 591 N L ++R GR ++ P Sbjct: 304 ATNRPDVLDPAILRPGRFDRLVHVP 328
>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7| Length = 837 Score = 38.9 bits (89), Expect = 0.013 Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 4/159 (2%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 +WG G GK+ + V + N I + EL + GE + IRQ + A + Sbjct: 572 LWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVP---- 627 Query: 337 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 516 C +F ++LDA R T+ ++++VN L +L G+ N R I V Sbjct: 628 CVIFFDELDALVPRR-DTSLSESSSRVVNTLL---------TELDGL-----NDRRGIFV 672 Query: 517 TG--NDFSTLYAPLIRDGRMEK--FYWAPTRDDRIGVCK 621 G N + ++R GR++K F P ++++ + K Sbjct: 673 IGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIK 711 Score = 38.9 bits (89), Expect = 0.013 Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 2/140 (1%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + ++ + I +SA + SG +GE K IR + EA + C Sbjct: 246 GPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAP----CL 301 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 522 +F +++DA + G Q + ++V A L+ D T E+ P+++ G Sbjct: 302 VFFDEIDAITPKRDGGAQREMERRIV-AQLLTSMDELT---------MEKTNGKPVIIIG 351 Query: 523 --NDFSTLYAPLIRDGRMEK 576 N +L A L R GR ++ Sbjct: 352 ATNRPDSLDAALRRAGRFDR 371
>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1) (LEMA-1) Length = 423 Score = 38.9 bits (89), Expect = 0.013 Identities = 32/141 (22%), Positives = 63/141 (44%), Gaps = 1/141 (0%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ A+ + ++ +L G+ AKL+ R+A + K+ Sbjct: 209 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAFQLAKEKSP 264 Query: 337 CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 513 C +FI+++DA G R ++ V T++ + + QL G + R+ ++ Sbjct: 265 CIIFIDEIDAIGTKRFDSEVS---GDREVQRTMLELLN-----QLDGF---SSDDRIKVI 313 Query: 514 VTGNDFSTLYAPLIRDGRMEK 576 N L L+R GR+++ Sbjct: 314 AATNRADILDPALMRSGRLDR 334
>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 644 Score = 38.9 bits (89), Expect = 0.013 Identities = 42/174 (24%), Positives = 71/174 (40%), Gaps = 7/174 (4%) Frame = +1 Query: 121 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 300 T+ KIP + + G G GK+ + + + + ++ E G A +R + Sbjct: 212 TIVGAKIPKGILLVGPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLF 271 Query: 301 REAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQ 465 ++A++ C +FI+++DA GAG GG + + N Sbjct: 272 KKASE----NAPCIVFIDEIDAVGRERGAGVGGGNDE---------------REQTLNQL 312 Query: 466 LPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWA--PTRDDRIGVCK 621 L M +EN V +V N L A L+R GR ++ P R R+G+ K Sbjct: 313 LTEMDGFKENKGVIVVGATNRADILDAALLRPGRFDRQVTVNLPDRLGRVGILK 366
>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 421 Score = 38.9 bits (89), Expect = 0.013 Identities = 38/145 (26%), Positives = 66/145 (45%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ + V + I + EL G+ +KL+ RE +M +K Sbjct: 198 LYGLPGTGKTLLAKAVAHRTNATFIRVVGSELVQKYIGDGSKLV----REIFEMARKKAP 253 Query: 337 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 516 +FI++LD+ A R T T ++ V TLM + ++ G ++K +N R I+ Sbjct: 254 SIIFIDELDSIAARRLNET--TGADREVQRTLMQLL-----AEMDG-FDKRKNIR--IIA 303 Query: 517 TGNDFSTLYAPLIRDGRMEKFYWAP 591 N L ++R GR ++ P Sbjct: 304 ATNRPDVLDPAILRPGRFDRLVHVP 328
>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1198 Score = 38.5 bits (88), Expect = 0.017 Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 2/149 (1%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + +N + EL + GE +R+ +++A D K C Sbjct: 878 YGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPC 933 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 +F ++LD+ A + G NQ + +M+ + +L GM E + V Sbjct: 934 VIFFDELDSVAPKRG--------NQGDSGGVMDRIVSQLLAELDGMSGGAEGGGDGVFVV 985 Query: 520 G--NDFSTLYAPLIRDGRMEKFYWAPTRD 600 G N L L+R GR +K + D Sbjct: 986 GATNRPDLLDEALLRPGRFDKMLYLGISD 1014
>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)| Length = 616 Score = 38.5 bits (88), Expect = 0.017 Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + + G G GK+ + V + G+ +S E G A +R + +A Sbjct: 192 KIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQA-- 249 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 K C +FI+++DA GAG GG + + N L M Sbjct: 250 --KANAPCIVFIDEIDAVGRQRGAGLGGGNDE---------------REQTLNQLLTEMD 292 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 E N + IV N L + L+R GR ++ Sbjct: 293 GFEGNTGIIIVAATNRPDVLDSALMRPGRFDR 324
>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)| Length = 665 Score = 38.5 bits (88), Expect = 0.017 Identities = 38/147 (25%), Positives = 61/147 (41%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + + G G GK+ + + + G+ +S E G A +R +++A Sbjct: 242 KIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA-- 299 Query: 316 MIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN 495 K+ C +FI+++DA GR G Y N TL N L M E N Sbjct: 300 --KENAPCLVFIDEIDA-VGRQRG-VGYGGGNDEREQTL--------NQLLTEMDGFEGN 347 Query: 496 PRVPIVVTGNDFSTLYAPLIRDGRMEK 576 + ++ N L L+R GR ++ Sbjct: 348 SGIIVIAATNRPDVLDLALLRPGRFDR 374
>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 398 Score = 38.1 bits (87), Expect = 0.022 Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 4/159 (2%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ + V + I + E GE A+L+ RE + K+ Sbjct: 180 LYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLV----REVFQLAKEKAP 235 Query: 337 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 516 +FI++LDA A R T T ++ V T+M + +L G +PR + V Sbjct: 236 SIIFIDELDAIAARR--TNSDTSGDREVQRTMMQLL-----AELDGF-----DPRGDVKV 283 Query: 517 TG--NDFSTLYAPLIRDGRMEKFYWA--PTRDDRIGVCK 621 G N L ++R GR ++ PT + RI + K Sbjct: 284 IGATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFK 322
>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)| Length = 1043 Score = 37.7 bits (86), Expect = 0.028 Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 2/159 (1%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ V + G+N I + E+ + G + IR+ + A + K Sbjct: 736 LYGYPGCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSV----KP 791 Query: 337 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 516 C LF ++ D+ A + G + V +++VN L + A L G+Y R ++ Sbjct: 792 CILFFDEFDSIAPKRGHDST-GVTDRVVNQLLTQMDGAE---GLDGVYILAATSRPDLID 847 Query: 517 TGNDFSTLYAPLIRDGRMEKFYWA--PTRDDRIGVCKGI 627 + L+R GR++K PT +R+ + + I Sbjct: 848 SA---------LLRPGRLDKSVICNIPTESERLDILQAI 877
>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein| homolog 1) (TBP-1) Length = 434 Score = 37.7 bits (86), Expect = 0.028 Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 3/161 (1%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 I+ P ++G G GK+ A+ + ++A +L GE AKL+ R+A Sbjct: 212 IRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLV----RDAF 267 Query: 313 DMIKKGKMCCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKE 489 + K+ +FI++LDA G R ++ V T++ + + QL G Sbjct: 268 ALAKEKAPTIIFIDELDAIGTKRFDSEKS---GDREVQRTMLELLN-----QLDGF---S 316 Query: 490 ENPRVPIVVTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDR 606 + RV ++ N L L+R GR+++ + P+ D R Sbjct: 317 SDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSR 357
>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding| protein homolog 1) (TBP-1) Length = 419 Score = 37.7 bits (86), Expect = 0.028 Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 1/149 (0%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 I+ P + ++G G GK+ A+ + ++ +L G+ AKL+ R+A Sbjct: 197 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 252 Query: 313 DMIKKGKMCCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKE 489 + K+ C +FI+++DA G R ++ V T++ + + QL G Sbjct: 253 LLAKEKSPCIIFIDEIDAIGTKRFDSEVS---GDREVQRTMLELLN-----QLDGF---S 301 Query: 490 ENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 + R+ ++ N L L+R GR+++ Sbjct: 302 SDDRIKVIAATNRADILDPALMRSGRLDR 330
>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7| Length = 435 Score = 37.7 bits (86), Expect = 0.028 Identities = 33/140 (23%), Positives = 62/140 (44%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 216 LYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 271 Query: 337 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 516 C +F +++DA G Q N V T++ + + QL G + + +++ Sbjct: 272 CLIFFDEIDAVGGARFDDGQGGDNE--VQRTMLELIN-----QLDGF---DPRGNIKVLM 321 Query: 517 TGNDFSTLYAPLIRDGRMEK 576 N TL L+R GR+++ Sbjct: 322 ATNRPDTLDPALMRPGRLDR 341
>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)| Length = 497 Score = 37.7 bits (86), Expect = 0.028 Identities = 34/154 (22%), Positives = 66/154 (42%) Frame = +1 Query: 124 LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYR 303 LP + L++GI +G GKS + + + + + + G L G GE R R Sbjct: 256 LPTPRGLLLIGI---QGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGES----ESRLR 308 Query: 304 EAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYN 483 + D+ + C L+I+++D +N+++ AT ++ + Sbjct: 309 QMIDVAETLSPCILWIDEMDKAFSNNDSRGDSGTSNRVL-ATFIS-------------WL 354 Query: 484 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYW 585 E+ V +V T N+ L +IR GR ++ ++ Sbjct: 355 SEKTKPVFVVATANNVDLLPLEIIRKGRFDEIFF 388
>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1000 Score = 37.4 bits (85), Expect = 0.037 Identities = 41/194 (21%), Positives = 80/194 (41%) Frame = +1 Query: 19 PGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCE 198 P + +D+ G + MD + + L + +K + +G G GK+ + Sbjct: 694 PKIPNVTWDDIGGMDVVKGEIMDTIDMPLKHPELFSSGMKKRSGILFYGPPGTGKTLLAK 753 Query: 199 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 378 + + +N + EL + GE +R+ +++A D K C +F ++LD+ A + Sbjct: 754 AIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARD----AKPCVIFFDELDSVAPK 809 Query: 379 MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIR 558 G NQ + +M+ + +L GM + + V ++ N L L+R Sbjct: 810 RG--------NQGDSGGVMDRIVSQLLAELDGMSSGGDG--VFVIGATNRPDLLDEALLR 859 Query: 559 DGRMEKFYWAPTRD 600 GR +K + D Sbjct: 860 PGRFDKMLYLGISD 873
>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding| homolog 5) Length = 437 Score = 37.4 bits (85), Expect = 0.037 Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 3/151 (1%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 IK P + ++G G GK+ + V + + + EL G+ +L RQ ++ A Sbjct: 213 IKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAG 272 Query: 313 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 483 + +FI+++DA GT +Y N+ + + T++ + + QL G + Sbjct: 273 ENAPS----IVFIDEIDAI-----GTKRYDSNSGGEREIQRTMLELLN-----QLDGFDD 318 Query: 484 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 + + V +++ N TL LIR GR+++ Sbjct: 319 RGD---VKVIMATNKIETLDPALIRPGRIDR 346
>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)| (TAT-binding homolog 3) Length = 467 Score = 37.4 bits (85), Expect = 0.037 Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 5/161 (3%) Frame = +1 Query: 109 KNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 288 + F TL I P + ++G G GK+ V + I + EL GE A+++ Sbjct: 233 ERFATL-GIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMV 291 Query: 289 RQRYREAADMIKKGKMCCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAP 453 R+ + +M + K C +F +++DA G GG + V T++ + Sbjct: 292 RELF----EMARTKKACIIFFDEIDAVGGARFDDGAGGDNE-------VQRTMLELI--- 337 Query: 454 TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 QL G + + ++ N +TL L+R GR+++ Sbjct: 338 --TQLDGF---DPRGNIKVMFATNRPNTLDPALLRPGRIDR 373
>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants| Length = 432 Score = 37.0 bits (84), Expect = 0.048 Identities = 21/73 (28%), Positives = 40/73 (54%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GKS+ + V + G +S+ +L S GE +L+RQ + +M ++ K Sbjct: 167 LYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLF----EMAREQKP 222 Query: 337 CCLFINDLDAGAG 375 +FI+++D+ G Sbjct: 223 SIIFIDEIDSLCG 235
>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4| Length = 443 Score = 37.0 bits (84), Expect = 0.048 Identities = 36/161 (22%), Positives = 76/161 (47%), Gaps = 3/161 (1%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 I+ P + ++G G GK+ + V + + + EL G+ K++R+ +R A Sbjct: 219 IRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVA- 277 Query: 313 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 483 ++ +FI+++DA GT +Y N+ + + T++ + + QL G + Sbjct: 278 ---EENAPSIVFIDEIDAV-----GTKRYDSNSGGEREIQRTMLELLN-----QLDGFDS 324 Query: 484 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 + + V +++ N +L LIR GR+++ P D++ Sbjct: 325 RGD---VKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEK 362
>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13| protein) (DOA4-independent degradation protein 6) Length = 437 Score = 36.6 bits (83), Expect = 0.063 Identities = 22/76 (28%), Positives = 39/76 (51%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GKS+ + V + +S+ +L S GE KL++Q + M ++ K Sbjct: 171 LYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFA----MARENKP 226 Query: 337 CCLFINDLDAGAGRMG 384 +FI+++DA G G Sbjct: 227 SIIFIDEVDALTGTRG 242
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 36.6 bits (83), Expect = 0.063 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 3/121 (2%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 IK P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 255 IKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEA- 313 Query: 313 DMIKKGKMCCLFINDLDAGA---GRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYN 483 +K +FI+++D+ A + G + V +Q++ TLM+ A +NV + N Sbjct: 314 ---EKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLL--TLMDGMKARSNVVVMAATN 368 Query: 484 K 486 + Sbjct: 369 R 369
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 436 Score = 36.6 bits (83), Expect = 0.063 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 1/150 (0%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ + V I ++A EL GE A+L+R+ + ++ ++ Sbjct: 218 LYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELF----ELAREKAP 273 Query: 337 CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 513 +FI+++DA GA RM T ++ V TL + L M + + ++ Sbjct: 274 SIIFIDEIDAIGARRMRDATS---GDREVQRTLTQL--------LAEMDGFDPLDDIKVI 322 Query: 514 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDD 603 N L L+R GR ++ P D+ Sbjct: 323 AATNRKDILDPALLRPGRFDRHIKIPLPDE 352
>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 679 Score = 36.6 bits (83), Expect = 0.063 Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 +IP + + G G GK+ V + G+ +S + G A +R + A Sbjct: 197 RIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA-- 254 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 KK C +FI+++DA GAG GG + Q +N L V++ G Sbjct: 255 --KKNAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQLL---------VEMDGF- 299 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 N + I+ N L L+R GR ++ Sbjct: 300 --SANEGIIIIAATNRADILDPALLRPGRFDR 329
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 36.2 bits (82), Expect = 0.082 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 KK C +FI+++DA GAG GG + Q +N L V++ G Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 E N + ++ N L L+R GR ++ Sbjct: 286 --EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 36.2 bits (82), Expect = 0.082 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 KK C +FI+++DA GAG GG + Q +N L V++ G Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 E N + ++ N L L+R GR ++ Sbjct: 286 --EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 36.2 bits (82), Expect = 0.082 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 KK C +FI+++DA GAG GG + Q +N L V++ G Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 E N + ++ N L L+R GR ++ Sbjct: 286 --EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 36.2 bits (82), Expect = 0.082 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 KK C +FI+++DA GAG GG + Q +N L V++ G Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 E N + ++ N L L+R GR ++ Sbjct: 286 --EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 36.2 bits (82), Expect = 0.082 Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + + G G GK+ + + + + +S + G A +R + +A Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 KK C +FI+++DA GAG GG + Q +N L V++ G Sbjct: 241 --KKAAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 E N + ++ N L L+R GR ++ Sbjct: 286 --EGNEGIIVIAATNRPDVLDPALLRPGRFDR 315
>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 36.2 bits (82), Expect = 0.082 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + ++G G GK+ V + G+ +S + G A +R + +A Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 420 K+ C +F++++DA GAG GG + T+N +V Sbjct: 252 --KQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLV 291
>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 760 Score = 36.2 bits (82), Expect = 0.082 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 7/102 (6%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + ++G G GK+ V + G+ +S + G A +R + +A Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 420 K+ C +F++++DA GAG GG + T+N +V Sbjct: 252 --KQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLV 291
>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 787 Score = 35.8 bits (81), Expect = 0.11 Identities = 24/85 (28%), Positives = 39/85 (45%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + ++G G GK+ V + G+ +S + G A R R+ D Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGA----SRVRDLFD 249 Query: 316 MIKKGKMCCLFINDLDAGAGRMGGT 390 K+ C +F++++DA GR GT Sbjct: 250 QAKQNSPCIIFVDEIDA-VGRQRGT 273
>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)| Length = 448 Score = 35.8 bits (81), Expect = 0.11 Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 3/151 (1%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 IK P + ++G G GK+ + V + + + EL G+ +L+RQ + A Sbjct: 222 IKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAA- 280 Query: 313 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 483 ++ +FI+++DA GT +Y + + + T++ + + QL G Sbjct: 281 ---EEHSPSIVFIDEIDA-----IGTKRYDAQSGAEREIQRTMLELLN-----QLDGFDT 327 Query: 484 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 + + + +++ N S L LIR GR+++ Sbjct: 328 SQRD--IKVIMATNRISDLDPALIRPGRIDR 356
>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)| Length = 795 Score = 35.8 bits (81), Expect = 0.11 Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 2/159 (1%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 K+P + G G GK+ + V + + + M+ E G A +R ++EA Sbjct: 340 KVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEA-- 397 Query: 316 MIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN 495 + C ++I+++DA G+ TT +N TL + V++ GM + Sbjct: 398 --RARAPCIVYIDEIDA-VGKKRSTTMSGFSNTEEEQTLNQLL-----VEMDGMGTTD-- 447 Query: 496 PRVPIVVTGNDFSTLYAPLIRDGRMEK--FYWAPTRDDR 606 V ++ + N L L+R GR+++ F PT +R Sbjct: 448 -HVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQER 485
>RECA_IDILO (Q5QUB8) Protein recA (Recombinase A)| Length = 372 Score = 35.8 bits (81), Expect = 0.11 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +1 Query: 199 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 378 +V + + P GE+ + G A+L+ Q R+ IKK C+FIN + G Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSNIKKSNTMCIFINQIRMKIGV 200 Query: 379 MGGTTQYT 402 M G + T Sbjct: 201 MFGNPETT 208
>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog| Length = 438 Score = 35.8 bits (81), Expect = 0.11 Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 5/145 (3%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 218 LYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 273 Query: 337 CCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPR 501 C +F +++DA G GG + V T++ + QL G + Sbjct: 274 CIIFFDEIDAIGGARFDDGAGGDNE-------VQRTMLELI-----TQLDGF---DPRGN 318 Query: 502 VPIVVTGNDFSTLYAPLIRDGRMEK 576 + ++ N +TL L+R GR+++ Sbjct: 319 IKVLFATNRPNTLDEALMRPGRIDR 343
>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 433 Score = 35.4 bits (80), Expect = 0.14 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 5/145 (3%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 214 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 269 Query: 337 CCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPR 501 C +F +++DA G GG + V T++ + + QL G + Sbjct: 270 CLIFFDEIDAIGGARFDDGAGGDNE-------VQRTMLELIN-----QLDGF---DPRGN 314 Query: 502 VPIVVTGNDFSTLYAPLIRDGRMEK 576 + +++ N TL L+R GR+++ Sbjct: 315 IKVLMATNRPDTLDPALMRPGRLDR 339
>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding| protein homolog 2) Length = 448 Score = 35.4 bits (80), Expect = 0.14 Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 3/159 (1%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 I+ P + ++G G GK+ + V + + EL G+ KL+R+ +R A Sbjct: 224 IRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVAD 283 Query: 313 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNN---QMVNATLMNIADAPTNVQLPGMYN 483 ++ +FI+++DA GT +Y ++ + + T++ + + QL G + Sbjct: 284 EL----SPSIVFIDEIDA-----VGTKRYDAHSGGEREIQRTMLELLN-----QLDGFDS 329 Query: 484 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 600 + + V +++ N +L L+R GR+++ P D Sbjct: 330 RGD---VKVILATNRIESLDPALLRPGRIDRKIEFPLPD 365
>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 35.4 bits (80), Expect = 0.14 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 5/145 (3%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 213 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 268 Query: 337 CCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPR 501 C +F +++DA G GG + V T++ + + QL G + Sbjct: 269 CLIFFDEIDAIGGARFDDGAGGDNE-------VQRTMLELIN-----QLDGF---DPRGN 313 Query: 502 VPIVVTGNDFSTLYAPLIRDGRMEK 576 + +++ N TL L+R GR+++ Sbjct: 314 IKVLMATNRPDTLDPALMRPGRLDR 338
>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 35.4 bits (80), Expect = 0.14 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 5/145 (3%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 213 LFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 268 Query: 337 CCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPR 501 C +F +++DA G GG + V T++ + + QL G + Sbjct: 269 CLIFFDEIDAIGGARFDDGAGGDNE-------VQRTMLELIN-----QLDGF---DPRGN 313 Query: 502 VPIVVTGNDFSTLYAPLIRDGRMEK 576 + +++ N TL L+R GR+++ Sbjct: 314 IKVLMATNRPDTLDPALMRPGRLDR 338
>KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 193 Score = 35.4 bits (80), Expect = 0.14 Identities = 28/83 (33%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +1 Query: 148 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 318 I+ + GG G GK QCE + K G +S GEL E + E +KLIR E D+ Sbjct: 9 IIFLMGGPGSGKGTQCEKLAEKYGFT--HLSTGELLRQELTSESERSKLIRD-IMERGDL 65 Query: 319 IKKGKMCCLFINDLDAGAGRMGG 387 + G + L + A G G Sbjct: 66 VPSGVVLELLKEAMVASLGNTKG 88
>KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) Length = 198 Score = 35.4 bits (80), Expect = 0.14 Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +1 Query: 148 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 318 I+ I GG G GK QCE + K G +S GEL E + E +KLIR E D+ Sbjct: 13 IIFIIGGPGSGKGTQCEKLVEKYGFT--HLSTGELLREELASESERSKLIRD-IMERGDL 69 Query: 319 IKKGKMCCLFINDLDAGAGRMGG 387 + G + L + A G G Sbjct: 70 VPSGIVLELLKEAMVASLGDTRG 92
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 35.4 bits (80), Expect = 0.14 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 3/121 (2%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 IK P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 245 IKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEA- 303 Query: 313 DMIKKGKMCCLFINDLDAGA---GRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYN 483 +K +FI+++D+ A + G + V +Q++ TLM+ A +NV + N Sbjct: 304 ---EKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLL--TLMDGMKARSNVVVIAATN 358 Query: 484 K 486 + Sbjct: 359 R 359
>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 35.0 bits (79), Expect = 0.18 Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 +IP + + G G GK+ + V + G+ +S + G A +R + +A Sbjct: 218 RIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDA-- 275 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 KK +FI+++DA G G GG + Q +N L +++ G Sbjct: 276 --KKAAPAIIFIDEIDAVGRQRGVGLGGGNDE---REQTLNQLL---------IEMDGF- 320 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 E N + ++ N L L+R GR ++ Sbjct: 321 --EGNEGIIVIAATNRSDVLDPALLRPGRFDR 350
>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 652 Score = 35.0 bits (79), Expect = 0.18 Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 +IP + + G G GK+ + V + G+ +S + G A +R + +A Sbjct: 218 RIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDA-- 275 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 KK +FI+++DA G G GG + Q +N L +++ G Sbjct: 276 --KKAAPAIIFIDEIDAVGRQRGVGLGGGNDE---REQTLNQLL---------IEMDGF- 320 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 E N + ++ N L L+R GR ++ Sbjct: 321 --EGNEGIIVIAATNRSDVLDPALLRPGRFDR 350
>CLPX_BIFLO (Q8G5R1) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 472 Score = 35.0 bits (79), Expect = 0.18 Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 5/115 (4%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREAAD-MIKKGKM 336 G G GK++ + + M + ++ A L E+G G+ + + QR +AAD + + + Sbjct: 154 GPTGVGKTYLAQALARVMNVPFVITDATTLTEAGYVGDDVETVLQRLLQAADGDVSRAQH 213 Query: 337 CCLFINDLDAGAGRMGGTTQYT--VNNQMVNATLMNIADAP-TNVQLPGMYNKEE 492 ++I+++D A + G T T V+ + V L+ I + +V L G +E Sbjct: 214 GIIYIDEIDKIARKSGENTSITRDVSGEGVQQALLKILEGTIASVPLEGTRKHKE 268
>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)| Length = 628 Score = 35.0 bits (79), Expect = 0.18 Identities = 35/147 (23%), Positives = 58/147 (39%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + + G G GK+ + + G+ ++S E G A +R + +A Sbjct: 205 KIPKGVLLVGPPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQA-- 262 Query: 316 MIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN 495 KK C +FI++LDA G+ + + N TL + G Sbjct: 263 --KKQAPCIVFIDELDA-IGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAG------- 312 Query: 496 PRVPIVVTGNDFSTLYAPLIRDGRMEK 576 V ++ N TL L+R GR ++ Sbjct: 313 ATVIVLAATNRPETLDPALLRPGRFDR 339
>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46| Length = 506 Score = 35.0 bits (79), Expect = 0.18 Identities = 36/154 (23%), Positives = 65/154 (42%), Gaps = 3/154 (1%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 + IP L + G +G GKS + + + + + + G L G GE +RQ + A Sbjct: 272 LPIPKGLLLVGIQGTGKSLTAKSIANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAE 331 Query: 313 DMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY---N 483 + C L+I+++D T NN D+ T ++ G + Sbjct: 332 TI----SPCILWIDEIDK------AFTGSNFNN-----------DSGTTKRVFGTFITWL 370 Query: 484 KEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYW 585 E+ V +V T N+ +L L+R GR ++ ++ Sbjct: 371 SEKKSPVFVVATANNIDSLPPELLRKGRFDEVFF 404
>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)| Length = 432 Score = 35.0 bits (79), Expect = 0.18 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 5/145 (3%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ V + I + EL GE A+++R+ + +M + K Sbjct: 213 LFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELF----EMARTKKA 268 Query: 337 CCLFINDLDAGAGR-----MGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPR 501 C +F +++DA G GG + V T++ + + QL G + Sbjct: 269 CLIFFDEIDAIGGARFDDGAGGDNE-------VQRTMLELIN-----QLDGF---DPRGN 313 Query: 502 VPIVVTGNDFSTLYAPLIRDGRMEK 576 + +++ N TL L+R GR+++ Sbjct: 314 IKVLMATNRPDTLDPALMRPGRLDR 338
>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 35.0 bits (79), Expect = 0.18 Identities = 37/152 (24%), Positives = 61/152 (40%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 +IP + + G G GK+ + + G+ +S + G A +R + A Sbjct: 192 RIPKGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA-- 249 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 KK C +FI+++DA GAG GG + Q +N L V++ G Sbjct: 250 --KKNAPCLIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQLL---------VEMDGF- 294 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 N + I+ N L L+R GR ++ Sbjct: 295 --SANEGIIIIAATNRADILDPALLRPGRFDR 324
>RECA_CHRVI (O32377) Protein recA (Recombinase A)| Length = 347 Score = 34.7 bits (78), Expect = 0.24 Identities = 26/110 (23%), Positives = 49/110 (44%) Frame = +1 Query: 73 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 252 P + +KL V+++ ++ P+ L I + + +V + + P GE+ Sbjct: 101 PVYAEKLGVNMTDLLVSQPDTG-EQALEITDMLVRSGAVDVVVVDSVAALTPKAEIEGEM 159 Query: 253 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 + G A+L+ Q R+ IK+ C +FIN + G M G+ + T Sbjct: 160 GDSHVGLQARLMSQALRKLTGNIKRSNCCVIFINQIRMKIGVMFGSPETT 209
>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1| protein) Length = 747 Score = 34.7 bits (78), Expect = 0.24 Identities = 37/147 (25%), Positives = 58/147 (39%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 K+P + + G G GK+ + G++ MS E + G AK IR + +A Sbjct: 312 KLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQA-- 369 Query: 316 MIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN 495 + +FI++LDA G+ Q Q +N L V+L G + Sbjct: 370 --RSRAPAIIFIDELDAIGGKRNPKDQ-AYAKQTLNQLL---------VELDGF---SQT 414 Query: 496 PRVPIVVTGNDFSTLYAPLIRDGRMEK 576 + I+ N L L R GR +K Sbjct: 415 SGIIIIGATNFPEALDKALTRPGRFDK 441
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 34.7 bits (78), Expect = 0.24 Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 7/138 (5%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + + N I + EL + GE +R + D + C Sbjct: 523 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVF----DKARAAAPC 578 Query: 340 CLFINDLDA-------GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENP 498 LF ++LD+ GAG GG V NQ++ T M+ +A NV + G N+ + Sbjct: 579 VLFFDELDSIAKARGGGAGGDGGGASDRVINQVL--TEMDGMNAKKNVFIIGATNRPDII 636 Query: 499 RVPIVVTGNDFSTLYAPL 552 ++ G +Y PL Sbjct: 637 DPAVLRPGRLDQLIYIPL 654 Score = 31.2 bits (69), Expect = 2.6 Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 3/121 (2%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 IK P + ++G G GK+ V + G +++ E+ S +GE +R+ + E Sbjct: 241 IKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEEC- 299 Query: 313 DMIKKGKMCCLFINDLDAGA---GRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYN 483 +K + LFI+++DA A + G + + +Q++ TLM+ +N+ + N Sbjct: 300 ---EKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQLL--TLMDGVKGRSNLVVIAATN 354 Query: 484 K 486 + Sbjct: 355 R 355
>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 34.7 bits (78), Expect = 0.24 Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + G G GK+ + + + + +S + G A +R + + Sbjct: 186 KIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQG-- 243 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 K+ C +FI+++DA G G GG + Q +N L V++ G Sbjct: 244 --KRNAPCIIFIDEIDAVGRHRGIGMGGGNDE---REQTLNQML---------VEMDGF- 288 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 E N V I+ N L L+R GR ++ Sbjct: 289 --EANEGVVIIAATNRPDVLDRALLRPGRFDR 318
>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 637 Score = 34.7 bits (78), Expect = 0.24 Identities = 36/152 (23%), Positives = 60/152 (39%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + G G GK+ + + + + +S + G A +R + + Sbjct: 186 KIPKGCLLIGPPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQG-- 243 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 K+ C +FI+++DA G G GG + Q +N L V++ G Sbjct: 244 --KRNAPCIIFIDEIDAVGRHRGIGMGGGNDE---REQTLNQML---------VEMDGF- 288 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 E N V I+ N L L+R GR ++ Sbjct: 289 --EANEGVVIIAATNRPDVLDRALLRPGRFDR 318
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 34.7 bits (78), Expect = 0.24 Identities = 36/155 (23%), Positives = 67/155 (43%), Gaps = 7/155 (4%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + + N I + EL + GE +R+ + D ++ C Sbjct: 520 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIF----DKARQSAPC 575 Query: 340 CLFINDLDA-------GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENP 498 LF ++LD+ G+G GG V NQ++ T M+ +A V + G N+ + Sbjct: 576 VLFFDELDSIATQRGGGSGGDGGGAADRVLNQLL--TEMDGMNAKKTVFIIGATNRPD-- 631 Query: 499 RVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDD 603 + + L+R GR+++ + P D+ Sbjct: 632 ------------IIDSALLRPGRLDQLIYIPLPDE 654 Score = 31.6 bits (70), Expect = 2.0 Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 3/121 (2%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 238 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 296 Query: 313 DMIKKGKMCCLFINDLDAGA---GRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYN 483 +K +FI+++D+ A + G + + +Q++ TLM+ + +V + G N Sbjct: 297 ---EKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLL--TLMDGLKSRAHVIVMGATN 351 Query: 484 K 486 + Sbjct: 352 R 352
>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) Length = 715 Score = 34.7 bits (78), Expect = 0.24 Identities = 39/155 (25%), Positives = 60/155 (38%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 K+P + + G G GK+ V + + S E + G A IR +REA Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369 Query: 316 MIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN 495 K C +FI++LD+ G+ + + Q T++ + L M + N Sbjct: 370 --KANAPCVIFIDELDSVGGKRIEFPMHPYSRQ----TIIQL--------LAEMDGFKPN 415 Query: 496 PRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRD 600 V I+ N L LIR GR + P D Sbjct: 416 EGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPD 450
>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding protein homolog SATA) Length = 439 Score = 34.3 bits (77), Expect = 0.31 Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 1/141 (0%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ A+ + ++ +L G+ AKL+ R+A + K+ Sbjct: 225 MYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV----RDAFALAKEKAP 280 Query: 337 CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 513 +FI++LDA G R ++ V T++ + + QL G + N +V ++ Sbjct: 281 SIIFIDELDAIGTKRFDSE---KAGDREVQRTMLELLN-----QLDGF---QPNTQVKVI 329 Query: 514 VTGNDFSTLYAPLIRDGRMEK 576 N L L+R GR+++ Sbjct: 330 AATNRVDILDPALLRSGRLDR 350
>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) (Proteasome subunit P50) Length = 439 Score = 34.3 bits (77), Expect = 0.31 Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 1/141 (0%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ A+ + ++ +L G+ AKL+ R+A + K+ Sbjct: 225 MYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV----RDAFALAKEKAP 280 Query: 337 CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 513 +FI++LDA G R ++ V T++ + + QL G + N +V ++ Sbjct: 281 SIIFIDELDAIGTKRFDSE---KAGDREVQRTMLELLN-----QLDGF---QPNTQVKVI 329 Query: 514 VTGNDFSTLYAPLIRDGRMEK 576 N L L+R GR+++ Sbjct: 330 AATNRVDILDPALLRSGRLDR 350
>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (DS9) Length = 714 Score = 34.3 bits (77), Expect = 0.31 Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + G G GK+ V + G+ +A E G A +R + +A Sbjct: 284 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 341 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 K C +FI+++DA GAG GG + Q +N L M Sbjct: 342 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE---REQTINQLLTE------------MD 384 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 N V ++ N L + L+R GR ++ Sbjct: 385 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 416
>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast| precursor (EC 3.4.24.-) Length = 704 Score = 34.3 bits (77), Expect = 0.31 Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + G G GK+ V + G+ +A E G A +R + +A Sbjct: 281 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 338 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 K C +FI+++DA GAG GG + Q +N L M Sbjct: 339 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE---REQTINQLLTE------------MD 381 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 N V ++ N L + L+R GR ++ Sbjct: 382 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 413
>RECA_CHLAU (O52394) Protein recA (Recombinase A)| Length = 351 Score = 34.3 bits (77), Expect = 0.31 Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 11/85 (12%) Frame = +1 Query: 193 CELVFAKMGINPIMMSA-----------GELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 CE++ I+ I++ + GE+ G A+L+ Q R+ + I K + Sbjct: 131 CEMLVRSNAIDVIVIDSVAALVPRAEIEGEMGDSMPGMQARLMSQALRKLSGAISKSRTV 190 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQ 414 +FIN L G M GT + T Q Sbjct: 191 VIFINQLRMKIGVMLGTPETTTGGQ 215
>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)| (TBP-1) Length = 442 Score = 34.3 bits (77), Expect = 0.31 Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 1/141 (0%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ A+ + ++ +L G+ AKL+ R+A + K+ Sbjct: 228 MYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV----RDAFALAKEKAP 283 Query: 337 CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 513 +FI++LDA G R ++ V T++ + + QL G + N +V ++ Sbjct: 284 SIIFIDELDAIGTKRFDSE---KAGDREVQRTMLELLN-----QLDGF---QPNTQVKVI 332 Query: 514 VTGNDFSTLYAPLIRDGRMEK 576 N L L+R GR+++ Sbjct: 333 AATNRVDILDPALLRSGRLDR 353
>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast| precursor (EC 3.4.24.-) Length = 716 Score = 34.3 bits (77), Expect = 0.31 Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + G G GK+ V + G+ +A E G A +R + +A Sbjct: 293 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKA-- 350 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 K C +FI+++DA GAG GG + Q +N L M Sbjct: 351 --KSKAPCIVFIDEIDAVGRQRGAGMGGGNDE---REQTINQLLTE------------MD 393 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 N V ++ N L + L+R GR ++ Sbjct: 394 GFSGNSGVIVLAATNRPDVLDSALLRPGRFDR 425
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 33.9 bits (76), Expect = 0.41 Identities = 33/147 (22%), Positives = 61/147 (41%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + V +N + EL + GE +R+ ++ A D K C Sbjct: 762 YGPPGTGKTLLAKAVATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARD----AKPC 817 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 +F ++LD+ A + G NQ + +M+ + +L G+ + + ++ Sbjct: 818 VIFFDELDSVAPKRG--------NQGDSGGVMDRIVSQLLAELDGLSTGGDG--LFVIGA 867 Query: 520 GNDFSTLYAPLIRDGRMEKFYWAPTRD 600 N L L+R GR +K + D Sbjct: 868 TNRPDLLDEALLRPGRFDKLLYLGISD 894
>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein| 6) (TBP-6) Length = 405 Score = 33.9 bits (76), Expect = 0.41 Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 1/141 (0%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ A+ + ++ +L G+ AKL+ R+A + K+ Sbjct: 209 MYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV----RDAFALAKEKAP 264 Query: 337 CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 513 +FI++LDA G R ++ V T++ + + QL G + N +V ++ Sbjct: 265 SIIFIDELDAIGTKRFDSE---KAGDREVQRTMLELLN-----QLDGF---QPNMQVKVI 313 Query: 514 VTGNDFSTLYAPLIRDGRMEK 576 N L L+R GR+++ Sbjct: 314 AATNRVDILDPALLRSGRLDR 334
>RECA_GEOSL (P62215) Protein recA (Recombinase A)| Length = 338 Score = 33.9 bits (76), Expect = 0.41 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ +I K C +FIN + G M G + T Sbjct: 157 GEMGDSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETT 209
>RECA_LISMO (Q9L723) Protein recA (Recombinase A)| Length = 348 Score = 33.9 bits (76), Expect = 0.41 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + +I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISMF (Q71ZS2) Protein recA (Recombinase A)| Length = 348 Score = 33.9 bits (76), Expect = 0.41 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + +I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISIN (Q92BV7) Protein recA (Recombinase A)| Length = 348 Score = 33.9 bits (76), Expect = 0.41 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + +I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEIT 207
>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 695 Score = 33.9 bits (76), Expect = 0.41 Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 +IP + + G G GK+ + V + G+ +S + G A +R + A Sbjct: 224 RIPAGVLLEGPPGTGKTLLAKAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENA-- 281 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 KK +FI+++DA GAG GG + Q +N L V++ G Sbjct: 282 --KKTAPSIIFIDEIDAVGRQRGAGLGGGNDE---REQTLNQLL---------VEMDGF- 326 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 +++ V ++ N L L+R GR ++ Sbjct: 327 -QDDGNSVIVIAATNRSDVLDPALLRPGRFDR 357
>RECA_CHLTE (O52393) Protein recA (Recombinase A)| Length = 346 Score = 33.9 bits (76), Expect = 0.41 Identities = 19/57 (33%), Positives = 26/57 (45%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 414 GE+ G A+L+ Q R+ I K CLFIN L G M G+ + T + Sbjct: 170 GEMGDSVVGLQARLMSQALRKLTGAISKSSSVCLFINQLRDKIGVMYGSPETTTGGK 226
>RECA_THEAQ (P48296) Protein recA (Recombinase A)| Length = 340 Score = 33.5 bits (75), Expect = 0.53 Identities = 27/113 (23%), Positives = 45/113 (39%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVN 423 GE+ + G A+L+ Q R+ ++ K +FIN + G M G + T + Sbjct: 156 GEMGDQHVGLQARLMSQALRKLTAVLSKSNTAAIFINQVREKVGVMYGNPETTPGGR--- 212 Query: 424 ATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFY 582 L + +V+ G K N V I V AP R+ +E ++ Sbjct: 213 -ALKFYSSVRLDVRKSGQPIKVGNEAVGIKVKVKVVKNKLAPPFREAELEIYF 264
>RECA_AERSA (P94190) Protein recA (Recombinase A)| Length = 353 Score = 33.5 bits (75), Expect = 0.53 Identities = 19/68 (27%), Positives = 31/68 (45%) Frame = +1 Query: 199 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 378 +V + + P GE+ + G A+L+ Q R+ IK C+FIN + G Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKNANCLCIFINQIRMKIGV 200 Query: 379 MGGTTQYT 402 M G+ + T Sbjct: 201 MFGSPETT 208
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 33.5 bits (75), Expect = 0.53 Identities = 33/148 (22%), Positives = 59/148 (39%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + + N I + EL + GE +R+ + D ++ C Sbjct: 520 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIF----DKARQSAPC 575 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 LF ++LD+ A + G + AD N L M V I+ Sbjct: 576 VLFFDELDSIATQRGNSA----------GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGA 625 Query: 520 GNDFSTLYAPLIRDGRMEKFYWAPTRDD 603 N + + L+R GR+++ + P D+ Sbjct: 626 TNRPDIIDSALLRPGRLDQLIYIPLPDE 653 Score = 31.6 bits (70), Expect = 2.0 Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 3/121 (2%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 238 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 296 Query: 313 DMIKKGKMCCLFINDLDAGA---GRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYN 483 +K +FI+++D+ A + G + + +Q++ TLM+ + +V + G N Sbjct: 297 ---EKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLL--TLMDGLKSRAHVIVMGATN 351 Query: 484 K 486 + Sbjct: 352 R 352
>RECA_VIBCH (P45383) Protein recA (Recombinase A)| Length = 354 Score = 33.5 bits (75), Expect = 0.53 Identities = 24/110 (21%), Positives = 47/110 (42%) Frame = +1 Query: 73 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 252 P + KL V++ + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVNIDELLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158 Query: 253 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 33.5 bits (75), Expect = 0.53 Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 8/95 (8%) Frame = +3 Query: 228 HHDECRRAGEWERWRASQAHQAAVP*GCRHD----QEG*DVLPLHQRS*RWCG*DGRNH- 392 HH E + R S Q+A P R+ + D + S RW G RNH Sbjct: 3505 HHHEASTQADSSRHSQSGQGQSAGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASRNHR 3564 Query: 393 -AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 488 + Q DG RHP H R H +A Q G Sbjct: 3565 GSAQEQSRDGSRHPTSHHEDRAGHGHSAESSRQSG 3599 Score = 30.4 bits (67), Expect = 4.5 Identities = 34/123 (27%), Positives = 46/123 (37%), Gaps = 14/123 (11%) Frame = +3 Query: 162 GRQGSRKIIPV*ACVRQDGH------QPHHDECRRAGEWERWRASQAHQAAVP*GCRHD- 320 G+ GSR + +Q G HH+ RA + Q Q++ P R+ Sbjct: 1857 GQSGSRSVSRQTRNEKQSGDGSRHSGSRHHEASSRADSSRHSQVGQG-QSSGPRTSRNQG 1915 Query: 321 ---QEG*DVLPLHQRS*RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHV 479 + D + S RW G RNH + Q DG RHP H R H +A Sbjct: 1916 SSVSQDSDSQGHSEDSERWSGSASRNHLGSAWEQSRDGSRHPGSHHEDRAGHGHSADSSR 1975 Query: 480 QQG 488 Q G Sbjct: 1976 QSG 1978 Score = 30.0 bits (66), Expect = 5.9 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = +3 Query: 363 RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 488 RW G RNH + Q DG RHP H+ R H +A Q G Sbjct: 2906 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2951 Score = 30.0 bits (66), Expect = 5.9 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = +3 Query: 363 RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 488 RW G RNH + Q DG RHP H+ R H +A Q G Sbjct: 2582 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2627
>RECA2_MYXXA (P48292) Protein recA 2 (Recombinase A 2)| Length = 358 Score = 33.5 bits (75), Expect = 0.53 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ I K + C +FIN + G M G + T Sbjct: 160 GEMGDAHMGVQARLMSQALRKLTGTIAKSQTCVIFINQIRMKIGVMFGNPETT 212
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 33.5 bits (75), Expect = 0.53 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 8/117 (6%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 312 KIP + G G GK+ + + + I ++ E LE PA R R+ Sbjct: 205 KIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPA-----RVRDMF 259 Query: 313 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMVNATLMNIADAPTNV 462 M +K C LFI+++DA G G +GG ++ T+N +V M+ ++ TNV Sbjct: 260 AMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVE---MDGFNSSTNV 313
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 33.5 bits (75), Expect = 0.53 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 7/102 (6%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + + G G GK+ + + + +S + G A +R + +A Sbjct: 182 KIPKGILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 239 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 420 KK C +FI+++DA GAG GG + T+N +V Sbjct: 240 --KKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 279
>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)| Length = 613 Score = 33.5 bits (75), Expect = 0.53 Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + + G G GK+ + + + + +S + G A +R + A Sbjct: 183 KIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHA-- 240 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 +K C +FI+++DA GAG GG + Q +N L V++ G Sbjct: 241 --RKSAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 + N V ++ N L L+R GR ++ Sbjct: 286 --DGNEGVILIAATNRPDVLDPALLRPGRFDR 315
>RECA_VIBVY (Q7MHR4) Protein recA (Recombinase A)| Length = 349 Score = 33.5 bits (75), Expect = 0.53 Identities = 24/110 (21%), Positives = 47/110 (42%) Frame = +1 Query: 73 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 252 P + KL V++ + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVNIDQLLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158 Query: 253 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>RECA_VIBVU (Q8DC51) Protein recA (Recombinase A)| Length = 349 Score = 33.5 bits (75), Expect = 0.53 Identities = 24/110 (21%), Positives = 47/110 (42%) Frame = +1 Query: 73 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 252 P + KL V++ + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVNIDQLLVSQPDTG-EQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEM 158 Query: 253 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>RECA_CLOTE (Q895I5) Protein recA (Recombinase A)| Length = 350 Score = 33.1 bits (74), Expect = 0.70 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ A I K +FIN L G M G+ + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGSINKSNCVAIFINQLREKVGIMFGSPETT 208
>RECA_ACHLA (P29225) Protein recA (Recombinase A)| Length = 331 Score = 33.1 bits (74), Expect = 0.70 Identities = 15/54 (27%), Positives = 29/54 (53%) Frame = +1 Query: 241 AGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 AG++ + + G A+++ Q R+ + +I K + +FIN + G M G + T Sbjct: 156 AGDMSANHVGLQARMMSQAMRKMSGVISKSNVVAIFINQIREKVGVMFGNPETT 209
>RECA_VIBAN (P26348) Protein recA (Recombinase A)| Length = 348 Score = 33.1 bits (74), Expect = 0.70 Identities = 23/110 (20%), Positives = 47/110 (42%) Frame = +1 Query: 73 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 252 P + KL V++ + ++ P+ L I + + ++ + + P GE+ Sbjct: 100 PIYAKKLGVNIDELLVSQPDTG-EQALEICDALARSGAIDVIVIDSVAALTPKAEIEGEM 158 Query: 253 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>RECA_LISWE (Q83TH3) Protein recA (Recombinase A)| Length = 348 Score = 33.1 bits (74), Expect = 0.70 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISSE (Q83TH4) Protein recA (Recombinase A)| Length = 348 Score = 33.1 bits (74), Expect = 0.70 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207
>RECA_LISIV (Q83TH2) Protein recA (Recombinase A)| Length = 348 Score = 33.1 bits (74), Expect = 0.70 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPEIT 207
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 33.1 bits (74), Expect = 0.70 Identities = 33/148 (22%), Positives = 59/148 (39%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + + N I + EL + GE +R+ + D ++ C Sbjct: 521 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIF----DKARQSAPC 576 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 LF ++LD+ A + G + + AD N L M V I+ Sbjct: 577 VLFFDELDSIATQRGSS----------SGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGA 626 Query: 520 GNDFSTLYAPLIRDGRMEKFYWAPTRDD 603 N + L+R GR+++ + P D+ Sbjct: 627 TNRPDIIDPALLRPGRLDQLIYIPLPDE 654 Score = 30.8 bits (68), Expect = 3.5 Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 3/121 (2%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 313 DMIKKGKMCCLFINDLDAGA---GRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYN 483 +K +FI+++D+ A + G + + +Q++ TLM+ + +V + G N Sbjct: 298 ---EKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLL--TLMDGLKSRAHVIVMGATN 352 Query: 484 K 486 + Sbjct: 353 R 353
>RECA1_LACLA (Q01840) Protein recA, chromosomal (Recombinase A)| Length = 387 Score = 33.1 bits (74), Expect = 0.70 Identities = 18/53 (33%), Positives = 27/53 (50%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+++ Q R+ A I K K +FIN L G M G+ + T Sbjct: 171 GEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETT 223
>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein| 10) (TBP-10) Length = 404 Score = 33.1 bits (74), Expect = 0.70 Identities = 30/140 (21%), Positives = 63/140 (45%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ A+ + ++ +L G+ AKL+ R+A + K+ Sbjct: 190 MYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLV----RDAFSLAKEKAP 245 Query: 337 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 516 +FI++LDA + + + ++ V T++ + + QL G + +V ++ Sbjct: 246 SIIFIDELDAIGNKRFDSEK--AGDREVQRTMLELLN-----QLDGF---QPTTQVKVIA 295 Query: 517 TGNDFSTLYAPLIRDGRMEK 576 N L L+R GR+++ Sbjct: 296 ATNRVDILDPALLRSGRLDR 315
>RECA_CLOAB (P58254) Protein recA (Recombinase A)| Length = 349 Score = 33.1 bits (74), Expect = 0.70 Identities = 18/53 (33%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ I K K +FIN L G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLTGSINKSKCIAIFINQLREKVGIMFGNPETT 208
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 32.7 bits (73), Expect = 0.91 Identities = 33/148 (22%), Positives = 58/148 (39%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + + N I + EL + GE +R+ + D ++ C Sbjct: 521 YGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIF----DKARQSAPC 576 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 LF ++LD+ A + G + AD N L M V I+ Sbjct: 577 VLFFDELDSIATQRGSSV----------GDAGGAADRVLNQLLTEMDGMSAKKTVFIIGA 626 Query: 520 GNDFSTLYAPLIRDGRMEKFYWAPTRDD 603 N + L+R GR+++ + P D+ Sbjct: 627 TNRPDIIDPALLRPGRLDQLIYIPLPDE 654 Score = 30.4 bits (67), Expect = 4.5 Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 3/121 (2%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 313 DMIKKGKMCCLFINDLDAGA---GRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYN 483 +K +FI+++D+ A + G + + +Q++ TLM+ + +V + G N Sbjct: 298 ---EKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLL--TLMDGLKSRAHVIVIGATN 352 Query: 484 K 486 + Sbjct: 353 R 353
>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like| protein) Length = 797 Score = 32.7 bits (73), Expect = 0.91 Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 9/156 (5%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 312 KIP + G G GK+ + + + I +S E LE PA R R+ Sbjct: 339 KIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPA-----RVRDLF 393 Query: 313 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMVNATLMNIADAPTNVQLP 471 + +K C LFI+++DA G G GG ++ T+N +V M+ + TNV Sbjct: 394 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVE---MDGFNTTTNV--- 447 Query: 472 GMYNKEENPRVPIVVTGNDFSTLYAP-LIRDGRMEK 576 +++ G + + P L+R GR ++ Sbjct: 448 ------------VILAGTNRPDILDPALLRPGRFDR 471
>RECA_BACSK (Q5WFX1) Protein recA (Recombinase A)| Length = 350 Score = 32.7 bits (73), Expect = 0.91 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 32.7 bits (73), Expect = 0.91 Identities = 33/148 (22%), Positives = 58/148 (39%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + + N I + EL + GE +R+ + D ++ C Sbjct: 521 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF----DKARQSAPC 576 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 LF ++LD+ A + G + AD N L M V I+ Sbjct: 577 VLFFDELDSIATQRGNSV----------GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGA 626 Query: 520 GNDFSTLYAPLIRDGRMEKFYWAPTRDD 603 N + L+R GR+++ + P D+ Sbjct: 627 TNRPDIIDPALLRPGRLDQLIYIPLPDE 654 Score = 30.8 bits (68), Expect = 3.5 Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 3/121 (2%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 +K P + ++G G GK+ V + G ++ E+ S AGE +R+ + EA Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297 Query: 313 DMIKKGKMCCLFINDLDAGA---GRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYN 483 +K +FI+++D+ A + G + + +Q++ TLM+ + +V + G N Sbjct: 298 ---EKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLL--TLMDGLKSRAHVIVMGATN 352 Query: 484 K 486 + Sbjct: 353 R 353
>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)| Length = 802 Score = 32.7 bits (73), Expect = 0.91 Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 9/156 (5%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGE-LESGNAGEPAKLIRQRYREAA 312 KIP + G G GK+ + + + I +S E LE PA R R+ Sbjct: 338 KIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPA-----RVRDLF 392 Query: 313 DMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMVNATLMNIADAPTNVQLP 471 + +K C LFI+++DA G G GG ++ T+N +V M+ + TNV Sbjct: 393 ALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVE---MDGFNTTTNV--- 446 Query: 472 GMYNKEENPRVPIVVTGNDFSTLYAP-LIRDGRMEK 576 +++ G + + P L+R GR ++ Sbjct: 447 ------------VILAGTNRPDILDPALLRPGRFDR 470
>RECA_VIBPA (Q87LR1) Protein recA (Recombinase A)| Length = 347 Score = 32.7 bits (73), Expect = 0.91 Identities = 24/110 (21%), Positives = 45/110 (40%) Frame = +1 Query: 73 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 252 P + KL V + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVDIDALLVSQPDTG-EQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEM 158 Query: 253 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 + G A+++ Q R+ +K+ C+FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMKIGVMFGNPETT 208
>RECA_OCEIH (Q8CXG7) Protein recA (Recombinase A)| Length = 347 Score = 32.7 bits (73), Expect = 0.91 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTTAIFINQIREKVGVMFGNPETT 207
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 32.7 bits (73), Expect = 0.91 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 235 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 293 Query: 313 DMIKKGKMCCLFINDLDA 366 +K +FI++LDA Sbjct: 294 ---EKNAPAIIFIDELDA 308 Score = 31.6 bits (70), Expect = 2.0 Identities = 33/149 (22%), Positives = 58/149 (38%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + + N I + EL + GE +R+ + D ++ C Sbjct: 517 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF----DKARQAAPC 572 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 LF ++LD+ A GG AD N L M V I+ Sbjct: 573 VLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMDGMSIKKNVFIIGA 622 Query: 520 GNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 N + ++R GR+++ + P D++ Sbjct: 623 TNRPDIIDPAILRPGRLDQLIYIPLPDEK 651
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 0.91 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 313 DMIKKGKMCCLFINDLDA 366 +K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307 Score = 32.3 bits (72), Expect = 1.2 Identities = 33/149 (22%), Positives = 58/149 (38%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + + N I + EL + GE +R+ + D ++ C Sbjct: 516 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF----DKARQAAPC 571 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 LF ++LD+ A GG AD N L M V I+ Sbjct: 572 VLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMDGMSTKKNVFIIGA 621 Query: 520 GNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 N + ++R GR+++ + P D++ Sbjct: 622 TNRPDIIDPAILRPGRLDQLIYIPLPDEK 650
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 0.91 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 313 DMIKKGKMCCLFINDLDA 366 +K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307 Score = 32.3 bits (72), Expect = 1.2 Identities = 33/149 (22%), Positives = 58/149 (38%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + + N I + EL + GE +R+ + D ++ C Sbjct: 516 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF----DKARQAAPC 571 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 LF ++LD+ A GG AD N L M V I+ Sbjct: 572 VLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMDGMSTKKNVFIIGA 621 Query: 520 GNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 N + ++R GR+++ + P D++ Sbjct: 622 TNRPDIIDPAILRPGRLDQLIYIPLPDEK 650
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 0.91 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 313 DMIKKGKMCCLFINDLDA 366 +K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307 Score = 32.3 bits (72), Expect = 1.2 Identities = 33/149 (22%), Positives = 58/149 (38%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + + N I + EL + GE +R+ + D ++ C Sbjct: 516 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF----DKARQAAPC 571 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 LF ++LD+ A GG AD N L M V I+ Sbjct: 572 VLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMDGMSTKKNVFIIGA 621 Query: 520 GNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 N + ++R GR+++ + P D++ Sbjct: 622 TNRPDIIDPAILRPGRLDQLIYIPLPDEK 650
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 32.7 bits (73), Expect = 0.91 Identities = 22/78 (28%), Positives = 39/78 (50%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 +K P + ++G G GK+ V + G +++ E+ S AGE +R+ + EA Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292 Query: 313 DMIKKGKMCCLFINDLDA 366 +K +FI++LDA Sbjct: 293 ---EKNAPAIIFIDELDA 307 Score = 32.3 bits (72), Expect = 1.2 Identities = 33/149 (22%), Positives = 58/149 (38%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + + N I + EL + GE +R+ + D ++ C Sbjct: 516 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIF----DKARQAAPC 571 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 LF ++LD+ A GG AD N L M V I+ Sbjct: 572 VLFFDELDSIAKARGGNI----------GDGGGAADRVINQILTEMDGMSTKKNVFIIGA 621 Query: 520 GNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 N + ++R GR+++ + P D++ Sbjct: 622 TNRPDIIDPAILRPGRLDQLIYIPLPDEK 650
>RECA_THETN (Q8RA55) Protein recA (Recombinase A)| Length = 342 Score = 32.7 bits (73), Expect = 0.91 Identities = 18/53 (33%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ A + K K +FIN L G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGVTSKSKSIVVFINQLREKVGVMFGNPETT 208
>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)| Length = 634 Score = 32.7 bits (73), Expect = 0.91 Identities = 34/150 (22%), Positives = 59/150 (39%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ + + + + I +S + G A +R + A KK Sbjct: 193 LYGEPGVGKTLLAKAIAGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETA----KKHAP 248 Query: 337 CCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVV 516 C +FI+++DA GR G + TL N L M + + + ++ Sbjct: 249 CIIFIDEIDA-VGRARGAIPVGGGHDEREQTL--------NQLLVEMDGFDTSDGIIVIA 299 Query: 517 TGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 N L L+R GR ++ + P D R Sbjct: 300 ATNRPDILDPALLRPGRFDRQIFIPKPDVR 329
>RECA_BACHD (Q9KAA7) Protein recA (Recombinase A)| Length = 349 Score = 32.7 bits (73), Expect = 0.91 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETT 207
>RECA_PORGI (P77925) Protein recA (Recombinase A)| Length = 340 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ G A+L+ Q R+ I K C+FIN L G + G + T Sbjct: 165 GEMGDNKVGLHARLMSQALRKMTGAISKSNTTCIFINQLREKIGVLFGNPETT 217
>RECA_RHOBA (Q7UJJ0) Protein recA (Recombinase A)| Length = 375 Score = 32.3 bits (72), Expect = 1.2 Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 11/121 (9%) Frame = +1 Query: 73 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSA--- 243 P++ KL V L ++ P+ G+ CE++ ++ I++ + Sbjct: 123 PSWAKKLGVELDSLLVSQPS------------SGEEAMQICEMLVKSNAVDVIIIDSVAA 170 Query: 244 --------GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 399 GE+ + G A+L+ Q R+ I K K +FIN + G M G+ + Sbjct: 171 LVPKAELEGEIGDSHVGLQARLMSQSMRKLTGAIAKSKSAVVFINQIREKVGVMFGSPET 230 Query: 400 T 402 T Sbjct: 231 T 231
>RECA_ENTFA (P42444) Protein recA (Recombinase A)| Length = 348 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGASHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPETT 208
>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding| protein homolog 2) Length = 403 Score = 32.3 bits (72), Expect = 1.2 Identities = 34/151 (22%), Positives = 61/151 (40%), Gaps = 1/151 (0%) Frame = +1 Query: 157 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 336 ++G G GK+ + V I + E GE +L+R +R + ++ Sbjct: 189 LYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFR----LARENSP 244 Query: 337 CCLFINDLDA-GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIV 513 +FI+++DA R T Q + L+N Q+ G + + V ++ Sbjct: 245 AIIFIDEIDAIATKRFDAQTGADREVQRILMELLN--------QMDGF---DVSVNVKVI 293 Query: 514 VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 + N TL L+R GR+++ P D R Sbjct: 294 MATNRQDTLDPALLRPGRLDRKIEFPLPDRR 324
>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor| (EC 3.4.24.-) (Fragment) Length = 662 Score = 32.3 bits (72), Expect = 1.2 Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + G G GK+ V + G+ +A E G A +R + A Sbjct: 261 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENA-- 318 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 K C +FI+++DA GAG GG + Q +N L M Sbjct: 319 --KSKAPCIVFIDEIDAVGRQRGAGLGGGNDE---REQTINQLLTE------------MD 361 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 N V ++ N L + L+R G+ ++ Sbjct: 362 GFSGNSGVIVLAATNRPDVLDSALLRPGKFDR 393
>RECA_ENTMU (Q6KCJ3) Protein recA (Recombinase A)| Length = 346 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208
>RECA_ENTHR (Q6KCJ5) Protein recA (Recombinase A)| Length = 346 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208
>RECA_ENTFC (Q6KCJ6) Protein recA (Recombinase A)| Length = 349 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEIT 208
>CELR2_MOUSE (Q9R0M0) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Flamingo 1) (mFmi1) Length = 2920 Score = 32.0 bits (71), Expect = 1.6 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Frame = +3 Query: 93 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 257 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1927 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1985 Query: 258 -WERWRASQAHQAAVP*G 308 W R R A P G Sbjct: 1986 WWPRTRFGLPAAAPCPKG 2003
>RECA_LACAC (Q5FL82) Protein recA (Recombinase A)| Length = 363 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 157 GEMGDAHVGLQARLMSQALRKLSGTISKTKTIAIFINQIREKVGVMFGNPETT 209
>RECA_BORBU (Q59180) Protein recA (Recombinase A)| Length = 365 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/61 (26%), Positives = 28/61 (45%) Frame = +1 Query: 220 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 399 + P + GE+ G A+L+ + R+ ++ K C +FIN + G M G + Sbjct: 164 LTPKLEIDGEMGDSQIGLQARLMSKALRKITGILSKSNTCIMFINQIRMRIGVMFGNPET 223 Query: 400 T 402 T Sbjct: 224 T 224
>RECA_LACPL (Q88UZ4) Protein recA (Recombinase A)| Length = 380 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + + K K LFIN + G M G + T Sbjct: 156 GEMGDAHVGLQARLMSQALRKLSGTLNKTKTIALFINQIREKVGVMFGNPETT 208
>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)| Length = 611 Score = 32.0 bits (71), Expect = 1.6 Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 5/152 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + + G G GK+ + + + + +S + G A +R + + Sbjct: 183 KIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHS-- 240 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 +K C +FI+++DA GAG GG + Q +N L V++ G Sbjct: 241 --RKSAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEK 576 + N + ++ N L L+R GR ++ Sbjct: 286 --DGNEGIILIAATNRPDVLDPALLRPGRFDR 315
>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor| (Epidermal growth factor-like 2) (Multiple epidermal growth factor-like domains 3) (Flamingo 1) Length = 2923 Score = 32.0 bits (71), Expect = 1.6 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Frame = +3 Query: 93 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 257 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1926 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1984 Query: 258 -WERWRASQAHQAAVP*G 308 W R R A P G Sbjct: 1985 WWPRTRFGLPAAAPCPKG 2002
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 32.0 bits (71), Expect = 1.6 Identities = 33/148 (22%), Positives = 56/148 (37%) Frame = +1 Query: 160 WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 +G G GK+ + + + N I + EL + GE +R + D + C Sbjct: 522 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVF----DKARAAAPC 577 Query: 340 CLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVT 519 LF ++LD+ A GG+ AD N L M V I+ Sbjct: 578 VLFFDELDSIAKARGGSV----------GDAGGAADRVINQVLTEMDGMNAKKNVFIIGA 627 Query: 520 GNDFSTLYAPLIRDGRMEKFYWAPTRDD 603 N + ++R GR+++ + P D+ Sbjct: 628 TNRPDIIDPAVLRPGRLDQLIYIPLPDE 655 Score = 30.0 bits (66), Expect = 5.9 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 312 +K P + ++G G GK+ V + G +++ E+ S +GE +R+ + E Sbjct: 240 VKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAEC- 298 Query: 313 DMIKKGKMCCLFINDLDA 366 +K LFI+++DA Sbjct: 299 ---EKNSPAILFIDEIDA 313
>RECA_BORHE (Q8VS69) Protein recA (Recombinase A)| Length = 356 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ G A+L+ + R+ ++ K C +FIN L G M G + T Sbjct: 170 GEMGDSQIGLQARLMSKALRKITGILSKSNTCIMFINQLRMKIGVMFGNPETT 222
>RECA_BORGA (Q662N0) Protein recA (Recombinase A)| Length = 362 Score = 32.0 bits (71), Expect = 1.6 Identities = 16/61 (26%), Positives = 28/61 (45%) Frame = +1 Query: 220 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 399 + P + GE+ G A+L+ + R+ ++ K C +FIN + G M G + Sbjct: 164 LTPKLEIDGEMGDSQIGLQARLMSKSLRKITGILSKSNTCIMFINQIRMRIGIMFGNPET 223 Query: 400 T 402 T Sbjct: 224 T 224
>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +1 Query: 142 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 318 PL++ + GG G GK QC + K G +SAGEL P +Y E + Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56 Query: 319 IKKGKM 336 IK+GK+ Sbjct: 57 IKEGKI 62
>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)| (Deoxycytidylate kinase) (Cytidine monophosphate kinase) (Uridine monophosphate/cytidine monophosphate kinase) (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate kinase) Length = 196 Score = 32.0 bits (71), Expect = 1.6 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%) Frame = +1 Query: 142 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 318 PL++ + GG G GK QC + K G +SAGEL P +Y E + Sbjct: 3 PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56 Query: 319 IKKGKM 336 IK+GK+ Sbjct: 57 IKEGKI 62
>CELR2_RAT (Q9QYP2) Cadherin EGF LAG seven-pass G-type receptor 2 (Multiple| epidermal growth factor-like domains 3) (Fragment) Length = 2144 Score = 32.0 bits (71), Expect = 1.6 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 6/78 (7%) Frame = +3 Query: 93 CCP--SLQKLHDPAQHQDPTHLGYLGRQGSRKIIPV*ACVRQDGHQPHHDECRRAGE--- 257 C P SL ++ DP Q P G +GRQ R P A V +G + ++D C RA E Sbjct: 1151 CYPTGSLSRVCDPEDGQCPCKPGVIGRQCDRCDNPF-AEVTTNGCEVNYDSCPRAIEAGI 1209 Query: 258 -WERWRASQAHQAAVP*G 308 W R R A P G Sbjct: 1210 WWPRTRFGLPAAAPCPKG 1227
>RECA_LACPE (Q6KCK3) Protein recA (Recombinase A)| Length = 378 Score = 32.0 bits (71), Expect = 1.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + + K K LFIN + G M G + T Sbjct: 156 GEMGDAHVGLQARLMSQALRKLSGTLNKTKTIALFINQIREKVGVMFGNPETT 208
>RECA_THETH (P61501) Protein recA (Recombinase A)| Length = 340 Score = 31.6 bits (70), Expect = 2.0 Identities = 26/113 (23%), Positives = 44/113 (38%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVN 423 GE+ + G A+L+ Q R+ ++ K +FIN + G G + T + Sbjct: 156 GEMGDQHVGLQARLMSQALRKLTAVLAKSNTAAIFINQVREKVGVTYGNPETTPGGR--- 212 Query: 424 ATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFY 582 L A +V+ G K N V + V AP R+ +E ++ Sbjct: 213 -ALKFYASVRLDVRKSGQPIKVGNEAVGVKVRVKVVKNKLAPPFREAELEIYF 264
>RECA_THET8 (Q5SHB2) Protein recA (Recombinase A)| Length = 340 Score = 31.6 bits (70), Expect = 2.0 Identities = 26/113 (23%), Positives = 44/113 (38%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVN 423 GE+ + G A+L+ Q R+ ++ K +FIN + G G + T + Sbjct: 156 GEMGDQHVGLQARLMSQALRKLTAVLAKSNTAAIFINQVREKVGVTYGNPETTPGGR--- 212 Query: 424 ATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFY 582 L A +V+ G K N V + V AP R+ +E ++ Sbjct: 213 -ALKFYASVRLDVRKSGQPIKVGNEAVGVKVRVKVVKNKLAPPFREAELEIYF 264
>RECA_THET2 (P61500) Protein recA (Recombinase A)| Length = 340 Score = 31.6 bits (70), Expect = 2.0 Identities = 26/113 (23%), Positives = 44/113 (38%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVN 423 GE+ + G A+L+ Q R+ ++ K +FIN + G G + T + Sbjct: 156 GEMGDQHVGLQARLMSQALRKLTAVLAKSNTAAIFINQVREKVGVTYGNPETTPGGR--- 212 Query: 424 ATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFY 582 L A +V+ G K N V + V AP R+ +E ++ Sbjct: 213 -ALKFYASVRLDVRKSGQPIKVGNEAVGVKVRVKVVKNKLAPPFREAELEIYF 264
>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 490 Score = 31.6 bits (70), Expect = 2.0 Identities = 21/93 (22%), Positives = 44/93 (47%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 248 GPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 303 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 441 +FI+++D+ R G + ++ + ++ + L+ + Sbjct: 304 IFIDEIDSICSRRGTSDEHEASRRVKSELLIQM 336
>RECA_STRRM (P95846) Protein recA (Recombinase A)| Length = 376 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 414 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGR 213
>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 409 Score = 31.6 bits (70), Expect = 2.0 Identities = 32/143 (22%), Positives = 60/143 (41%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + V + I + EL + GE A+L+R+ +R A + Sbjct: 180 GPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPS----I 235 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 522 LFI+++DA A + T ++ V T++ + +L G + V ++ Sbjct: 236 LFIDEIDAIASKR--VDIGTSGDREVQRTMLQLL-----AELDGF---DPLDNVKVIAAT 285 Query: 523 NDFSTLYAPLIRDGRMEKFYWAP 591 N + ++R GR ++ P Sbjct: 286 NRLDLIDPAVLRPGRFDRIIEVP 308
>RECA_STRVL (P48295) Protein recA (Recombinase A)| Length = 377 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 414 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGR 213
>RECA_STRLI (P48294) Protein recA (Recombinase A)| Length = 374 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 414 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGR 213
>RECA_STRCO (O50487) Protein recA (Recombinase A)| Length = 374 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 414 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGR 213
>RECA_STRAW (Q82KB1) Protein recA (Recombinase A)| Length = 377 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 414 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGR 213
>RECA_PHOPR (Q6LMU2) Protein recA (Recombinase A)| Length = 352 Score = 31.6 bits (70), Expect = 2.0 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+++ Q R+ +K C+FIN + G M G + T Sbjct: 156 GEMGDSHMGLQARMLSQAMRKLTGNLKNANCMCIFINQIRMKIGVMFGNPETT 208
>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 31.6 bits (70), Expect = 2.0 Identities = 21/93 (22%), Positives = 44/93 (47%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 246 GPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 301 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 441 +FI+++D+ R G + ++ + ++ + L+ + Sbjct: 302 IFIDEIDSICSRRGTSDEHEASRRVKSELLIQM 334
>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC| 3.6.4.3) (Katanin p60 subunit A-like 1) (p60 katanin-like 1) Length = 488 Score = 31.6 bits (70), Expect = 2.0 Identities = 21/93 (22%), Positives = 44/93 (47%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 246 GPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 301 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 441 +FI+++D+ R G + ++ + ++ + L+ + Sbjct: 302 IFIDEIDSICSRRGTSDEHEASRRVKSELLIQM 334
>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) Length = 516 Score = 31.6 bits (70), Expect = 2.0 Identities = 30/143 (20%), Positives = 64/143 (44%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + V + G +S+ L S GE KL+R + +M + Sbjct: 274 GPPGTGKTMLAKAVATECGTTFFNVSSASLTSKYHGESEKLVRLLF----EMARFYAPST 329 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTG 522 +FI+++D+ + G +++ + ++ + L+ + + G EE+ ++ +V+ Sbjct: 330 IFIDEIDSICSKRGTGSEHEASRRVKSELLIQMDG------VSGPSAGEESSKMVMVLAA 383 Query: 523 NDFSTLYAPLIRDGRMEKFYWAP 591 +F +R R+EK + P Sbjct: 384 TNFPWDIDEALR-RRLEKRIYIP 405
>RECA_STRAM (P41054) Protein recA (Recombinase A)| Length = 372 Score = 31.6 bits (70), Expect = 2.0 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 414 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T + Sbjct: 157 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETTTGGR 213
>RECA_PSEOL (Q9R9U2) Protein recA (Recombinase A)| Length = 348 Score = 31.6 bits (70), Expect = 2.0 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+++ Q R+ +K C+FIN + G M G + T Sbjct: 156 GEIGDSHVGLAARMMSQAMRKITGNLKNSNTMCIFINQIRMKIGVMFGNPETT 208
>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)| Length = 610 Score = 31.2 bits (69), Expect = 2.6 Identities = 36/162 (22%), Positives = 65/162 (40%), Gaps = 5/162 (3%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 315 KIP + + G G GK+ + + + + +S + G A +R + + Sbjct: 183 KIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHS-- 240 Query: 316 MIKKGKMCCLFINDLDA-----GAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMY 480 +K C +FI+++DA GAG GG + Q +N L V++ G Sbjct: 241 --RKVAPCIIFIDEIDAVGRQRGAGLGGG---HDEREQTLNQML---------VEMDGF- 285 Query: 481 NKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR 606 + N + ++ N L L+R GR ++ + D R Sbjct: 286 --DGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALPDIR 325
>RECA_STRCT (P41055) Protein recA (Recombinase A) (Fragment)| Length = 142 Score = 31.2 bits (69), Expect = 2.6 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + + K +FIN L G M G+ + T Sbjct: 89 GEMGDSHVGLQARLMSQALRKITSALNQSKTTAIFINQLREKIGVMFGSPETT 141
>MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1) (Protein nM15)| Length = 529 Score = 31.2 bits (69), Expect = 2.6 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 2/81 (2%) Frame = -1 Query: 613 HRYGRHGWEPSRTSPYDHHGSEEXXXXXXXXXXXRWAHGGSPPCCTCQGAARWWGHR--R 440 H H W+ R P+++ + W H +P +G + W G R Sbjct: 181 HTLAFHDWQGPR--PWENLNLSDWEVQSPIQVSGDWEHPNTP-----RGLSGWEGPSTSR 233 Query: 439 CSSGWRSPSGC*RCTAWFRPS 377 SGW PS +AW PS Sbjct: 234 ILSGWEGPSASWALSAWEGPS 254
>RECA_TREDE (P62221) Protein recA (Recombinase A)| Length = 414 Score = 31.2 bits (69), Expect = 2.6 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +1 Query: 220 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQY 399 + P AGE+ + G A+L+ Q R+ +I K +FIN + G M G+ + Sbjct: 161 LTPQAEIAGEMGDSHMGLQARLMSQALRKLTAIIGKSNCMIIFINQIRMKIGVMFGSPET 220 Query: 400 T 402 T Sbjct: 221 T 221
>RECA_ENTGA (Q6KCK0) Protein recA (Recombinase A)| Length = 348 Score = 31.2 bits (69), Expect = 2.6 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGIMFGNPETT 208
>SPAST_HUMAN (Q9UBP0) Spastin| Length = 616 Score = 31.2 bits (69), Expect = 2.6 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Frame = +1 Query: 109 KNFMTLPNIKIPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 261 + + LP+++ L G+ +G G GK+ + V A+ +SA L S Sbjct: 355 QEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK 414 Query: 262 NAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDA 366 GE KL+R + A ++ + +FI+++D+ Sbjct: 415 YVGEGEKLVRALFAVAREL----QPSIIFIDEVDS 445
>RECA1_MYXXA (P48291) Protein recA 1 (Recombinase A 1)| Length = 342 Score = 31.2 bits (69), Expect = 2.6 Identities = 15/53 (28%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + + C +FIN + G M G + T Sbjct: 159 GEMGDAHMGVQARLMSQALRKLTGAVSRSGTCIIFINQIRMKIGVMFGNPETT 211
>SPAST_MOUSE (Q9QYY8) Spastin| Length = 614 Score = 31.2 bits (69), Expect = 2.6 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 9/95 (9%) Frame = +1 Query: 109 KNFMTLPNIKIPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELESG 261 + + LP+++ L G+ +G G GK+ + V A+ +SA L S Sbjct: 353 QEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSK 412 Query: 262 NAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDA 366 GE KL+R + A ++ + +FI+++D+ Sbjct: 413 YVGEGEKLVRALFAVAREL----QPSIIFIDEVDS 443
>RECA_RUMAL (P49985) Protein recA (Recombinase A) (Fragment)| Length = 121 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/53 (32%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K K +FIN + G M G + T Sbjct: 66 GEMGDTHVGLQARLMSQALRKLSGEINKTKTIAIFINQIREKVGVMFGNPETT 118
>RECA_MYCGE (P47581) Protein recA (Recombinase A)| Length = 340 Score = 30.8 bits (68), Expect = 3.5 Identities = 16/57 (28%), Positives = 25/57 (43%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 414 G +E G A+++ + R ++ K C LFIN L G M G + T + Sbjct: 158 GTIEEQTIGLHARMMSKGLRRIQSILPDSKTCVLFINQLREKPGVMFGNNEVTTGGK 214
>RECA_CHRVO (Q7NXL9) Protein recA (Recombinase A)| Length = 350 Score = 30.8 bits (68), Expect = 3.5 Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 11/81 (13%) Frame = +1 Query: 193 CELVFAKMGINPIMMSA-----------GELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 C+++ G++ I++ + GE+ + G A+L+ Q R+ IK+ Sbjct: 130 CDMLVRSSGVDVIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGNIKRTNTL 189 Query: 340 CLFINDLDAGAGRMGGTTQYT 402 +FIN + G M G + T Sbjct: 190 VIFINQIRMKIGVMFGNPETT 210
>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)| Length = 1109 Score = 30.8 bits (68), Expect = 3.5 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -2 Query: 312 CSLTVPLPDELGWLSSVPTLQLSGTHHDG-VDAHLGEHKLTLE 187 C+L+ P+P G L+ + TL L+G H G + LG+ K ++ Sbjct: 294 CALSGPIPSCFGQLTKLDTLYLAGNHFSGRIPPELGKCKSMID 336
>EPHB6_PANTR (P0C0K6) Ephrin type-B receptor 6 precursor (Tyrosine-protein| kinase-defective receptor EPH-6) Length = 1005 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Frame = -1 Query: 499 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 374 GGSPP C G +W G RC G++ G C A R Y Sbjct: 262 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 306
>RECA_CLOPE (P94666) Protein recA (Recombinase A)| Length = 352 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ I K +FIN L G M G + T Sbjct: 159 GEMGDSHVGLQARLMSQALRKLTGTINKSNCVVIFINQLREKVGIMFGNPETT 211
>EPHB6_HUMAN (O15197) Ephrin type-B receptor 6 precursor (Tyrosine-protein| kinase-defective receptor EPH-6) (HEP) Length = 1006 Score = 30.8 bits (68), Expect = 3.5 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%) Frame = -1 Query: 499 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 374 GGSPP C G +W G RC G++ G C A R Y Sbjct: 263 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 307
>DTD_BURPS (Q63QX1) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)| Length = 152 Score = 30.8 bits (68), Expect = 3.5 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 6/96 (6%) Frame = +1 Query: 328 GKMCCLFINDLDAGAGRMGG---TTQYTV---NNQMVNATLMNIADAPTNVQLPGMYNKE 489 GKM L +++LD GAGR GG +Q+T+ N + + A +L + + Sbjct: 60 GKMN-LPVSNLD-GAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRR 117 Query: 490 ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 597 R PIV TG + + L+ DG + +W TR Sbjct: 118 ARERHPIVATGEFGADMQVSLVNDGPVT--FWLQTR 151
>DTD_BURMA (Q62HB3) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)| Length = 152 Score = 30.8 bits (68), Expect = 3.5 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 6/96 (6%) Frame = +1 Query: 328 GKMCCLFINDLDAGAGRMGG---TTQYTV---NNQMVNATLMNIADAPTNVQLPGMYNKE 489 GKM L +++LD GAGR GG +Q+T+ N + + A +L + + Sbjct: 60 GKMN-LPVSNLD-GAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRR 117 Query: 490 ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTR 597 R PIV TG + + L+ DG + +W TR Sbjct: 118 ARERHPIVATGEFGADMQVSLVNDGPVT--FWLQTR 151
>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) (Lipotransin) Length = 491 Score = 30.8 bits (68), Expect = 3.5 Identities = 33/146 (22%), Positives = 62/146 (42%), Gaps = 3/146 (2%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + V + +S+ L S GE KL+R + +M + Sbjct: 249 GPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYSPAT 304 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN---PRVPIV 513 +FI+++D+ R G + ++ + +M A VQ+ G+ EN ++ +V Sbjct: 305 IFIDEIDSICSRRGTSEEHEASRRM---------KAELLVQMDGVGGASENDDPSKMVMV 355 Query: 514 VTGNDFSTLYAPLIRDGRMEKFYWAP 591 + +F +R R+EK + P Sbjct: 356 LAATNFPWDIDEALR-RRLEKRIYIP 380
>RECA_LACHE (Q02348) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.4 bits (67), Expect = 4.5 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGG 387 GE+ + G A+L+ Q R+ + I K K +FIN + G M G Sbjct: 56 GEMGDAHVGLQARLMSQALRKLSGTISKTKTIAIFINQIREKVGIMFG 103
>EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosine-protein| kinase-defective receptor EPH-6) (MEP) Length = 1014 Score = 30.4 bits (67), Expect = 4.5 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%) Frame = -1 Query: 499 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 374 GGSPP C G RW G RC G + G C A SY Sbjct: 273 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQACPEGSY 317
>RECA_SYMTH (Q67NU3) Protein recA (Recombinase A)| Length = 350 Score = 30.4 bits (67), Expect = 4.5 Identities = 17/53 (32%), Positives = 24/53 (45%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ G A+L+ Q R+ I K K +FIN + G M G + T Sbjct: 159 GEMGDSFVGLQARLMSQALRKLTGAISKSKAVVIFINQIREKVGVMFGNPETT 211
>KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast precursor (EC| 2.7.4.3) (ATP-AMP transphosphorylase) Length = 283 Score = 30.4 bits (67), Expect = 4.5 Identities = 20/65 (30%), Positives = 33/65 (50%) Frame = +1 Query: 142 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 321 PL + I G GK QCEL+ K G+ + +SAG+L + + R A + + Sbjct: 64 PLKIMISGAPASGKGTQCELITHKYGL--VHISAGDLLRAEIASGS----ENGRRAKEHM 117 Query: 322 KKGKM 336 +KG++ Sbjct: 118 EKGQL 122
>UMPK_ARATH (O04905) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) (UMP/CMP kinase) Length = 202 Score = 30.4 bits (67), Expect = 4.5 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYRE 306 K P ++ + GG G GK QC + G +SAG+L E + E +I+ Sbjct: 12 KKPTVIFVLGGPGSGKGTQCAYIVEHYGYT--HLSAGDLLRAEIKSGSENGTMIQ----- 64 Query: 307 AADMIKKGKM 336 +MIK+GK+ Sbjct: 65 --NMIKEGKI 72
>RECA_VIBNA (Q6XZ07) Protein recA (Recombinase A)| Length = 348 Score = 30.4 bits (67), Expect = 4.5 Identities = 23/110 (20%), Positives = 44/110 (40%) Frame = +1 Query: 73 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 252 P + KL V + ++ P+ L I + + +V + + P GE+ Sbjct: 100 PVYAKKLGVDIDALLVSQPDTG-EQALEICDALARSGAIDVMVVDSVAALTPKAEIEGEM 158 Query: 253 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 + G A+++ Q R+ +K+ C+FI + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFIKQIRMKIGVMFGNPETT 208
>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 30.4 bits (67), Expect = 4.5 Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 3/146 (2%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + V + +S+ L S GE KL+R + +M + Sbjct: 249 GPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYSPAT 304 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN---PRVPIV 513 +FI+++D+ R G + ++ + + V A L+ VQ+ G+ EN ++ +V Sbjct: 305 IFIDEIDSICSRRGTSEEHEASRR-VKAELL--------VQMDGVGGASENDDPSKMVMV 355 Query: 514 VTGNDFSTLYAPLIRDGRMEKFYWAP 591 + +F +R R+EK + P Sbjct: 356 LAATNFPWDIDEALR-RRLEKRIYIP 380
>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)| (Katanin p60 subunit A1) (p60 katanin) Length = 491 Score = 30.4 bits (67), Expect = 4.5 Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 3/146 (2%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + V + +S+ L S GE KL+R + +M + Sbjct: 249 GPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLF----EMARFYSPAT 304 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN---PRVPIV 513 +FI+++D+ R G + ++ + + V A L+ VQ+ G+ EN ++ +V Sbjct: 305 IFIDEIDSICSRRGTSEEHEASRR-VKAELL--------VQMDGVGGTSENDDPSKMVMV 355 Query: 514 VTGNDFSTLYAPLIRDGRMEKFYWAP 591 + +F +R R+EK + P Sbjct: 356 LAATNFPWDIDEALR-RRLEKRIYIP 380
>RECA_MAGMG (P16034) Protein recA (Recombinase A)| Length = 344 Score = 30.4 bits (67), Expect = 4.5 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + K K +FIN + G M G + T Sbjct: 154 GEMGDNHMGLHARLMSQALRKLTGSVSKSKTIVIFINQIRMKIGVMFGNPETT 206
>EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-protein| kinase-defective receptor EPH-6) Length = 1013 Score = 30.4 bits (67), Expect = 4.5 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%) Frame = -1 Query: 499 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 374 GGSPP C G RW G RC G + G C A SY Sbjct: 272 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQACPEGSY 316
>RECA_LACDE (Q02347) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/48 (33%), Positives = 24/48 (50%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGG 387 GE+ + G A+L+ Q R+ + I K K +FIN + G M G Sbjct: 56 GEMGDSHVGLQARLMSQALRKLSGTIAKTKTIAIFINQIREKVGVMFG 103
>RECA_CLOBE (P42441) Protein recA (Recombinase A) (Fragment)| Length = 104 Score = 30.0 bits (66), Expect = 5.9 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGT 390 GE+ + G A+L+ Q R+ A I K +FIN L G M G+ Sbjct: 56 GEMGDSHIGLQARLMSQALRKLAGTINKTNCVAIFINQLREKLGFMFGS 104
>RECA_STAAW (P68846) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAU (P68845) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAS (Q6G9S8) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAR (Q6GHF0) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAN (P68844) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAM (P68843) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAAC (Q5HGE6) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_METCA (Q60BS8) Protein recA (Recombinase A)| Length = 347 Score = 30.0 bits (66), Expect = 5.9 Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 5/115 (4%) Frame = +1 Query: 73 PAFMDKLVVHLSKNFMTLPN-----IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMM 237 P + +K+ V+L ++ P+ ++I +L GG ++ + + P Sbjct: 101 PVYAEKIGVNLDDLLVSQPDTGEQALEIADVLVRSGG------VDVVVIDSVAALTPKAE 154 Query: 238 SAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ IK+ +FIN + G M G + T Sbjct: 155 LEGEMGDSHMGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGNPETT 209
>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A| kinase) Length = 208 Score = 30.0 bits (66), Expect = 5.9 Identities = 13/28 (46%), Positives = 21/28 (75%) Frame = +1 Query: 136 KIPLILGIWGGKGQGKSFQCELVFAKMG 219 ++PL++G+ GG G GKS C ++ A+MG Sbjct: 4 RLPLLVGVTGGIGSGKSTVCAML-AEMG 30
>VPG_BLRV (P19127) Putative genome-linked protein precursor (VPG) (16 kDa| protein) (ORF 2) Length = 142 Score = 30.0 bits (66), Expect = 5.9 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -3 Query: 221 MPILANTSSHWNDFP*PL-PPQIPKMSGILMLGRVMKFLERWTTSLS 84 M I++ TSS W P PL PPQ+P + ++ R + + T S S Sbjct: 49 MSIISRTSS-WRTSPRPLPPPQVPSLMNSILTSRTQQSSPKLTNSAS 94
>Y1420_RALSO (Q8XZH5) UPF0085 protein RSc1420| Length = 279 Score = 30.0 bits (66), Expect = 5.9 Identities = 33/102 (32%), Positives = 41/102 (40%), Gaps = 6/102 (5%) Frame = -2 Query: 357 IVDEEA------AHLTLLDHVCSLTVPLPDELGWLSSVPTLQLSGTHHDGVDAHLGEHKL 196 +VD EA A T+LD + PL ELG SS G H D +K Sbjct: 77 LVDAEANRIVHQARATILDMFQTFIEPLERELGLKSS----HAIGRFHQNADTEA--YKN 130 Query: 195 TLE*FSLTLASPDTQDEWDLDVGQGHEVFGEMDNKLVHESRS 70 +E + +LA D GQ H+ E D LV SRS Sbjct: 131 RIEAINFSLAHDD---------GQSHKNLAEADVILVGVSRS 163
>RECA_AQUAE (O67905) Protein recA (Recombinase A)| Length = 345 Score = 30.0 bits (66), Expect = 5.9 Identities = 15/53 (28%), Positives = 24/53 (45%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ G+ A+L+ Q R+ + K +FIN + G M G + T Sbjct: 159 GEMGEAQVGKQARLMSQALRKLKGAVHKSNTALIFINQIREKIGVMFGNPETT 211
>RECA_VIBF1 (Q5E7G6) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 5.9 Identities = 22/110 (20%), Positives = 46/110 (41%) Frame = +1 Query: 73 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 252 P + KL V++ + ++ P+ L I + + ++ + + P GE+ Sbjct: 100 PVYAKKLGVNIDELLVSQPDTG-EQALEICDALARSGAVDVMVIDSVAALTPKAEIEGEM 158 Query: 253 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 + G A+++ Q R+ +K+ +FIN + G M G + T Sbjct: 159 GDSHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGNPETT 208
>RECA_STAHJ (Q4L5Y8) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_LEGPN (Q05358) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ IK+ +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETT 209
>RECA_LEGPL (Q5WVQ0) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ IK+ +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETT 209
>RECA_LEGPH (Q5ZUJ7) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ IK+ +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETT 209
>RECA_LEGPA (Q5X4B5) Protein recA (Recombinase A)| Length = 348 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 26/53 (49%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ IK+ +FIN + G M G+ + T Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTANIKRSNTLVIFINQIRMKIGVMFGSPETT 209
>KAD1_HUMAN (P00568) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP| transphosphorylase) (AK1) (Myokinase) Length = 194 Score = 30.0 bits (66), Expect = 5.9 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Frame = +1 Query: 133 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 303 +K I+ + GG G GK QCE + K G + + E+ SG+A R + Sbjct: 5 LKKTKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSA---------RGK 55 Query: 304 EAADMIKKGKM 336 + +++++KG++ Sbjct: 56 KLSEIMEKGQL 66
>RECA_STAES (Q8CPF4) Protein recA (Recombinase A)| Length = 349 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_STAEQ (Q5HPQ6) Protein recA (Recombinase A)| Length = 349 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ + I K +FIN + G M G + T Sbjct: 156 GEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETT 208
>RECA_METFL (P18076) Protein recA (Recombinase A)| Length = 344 Score = 30.0 bits (66), Expect = 5.9 Identities = 27/110 (24%), Positives = 46/110 (41%) Frame = +1 Query: 73 PAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 252 P + KL V++S ++ P+ L I + S +V + + P GE+ Sbjct: 101 PVYAQKLGVNVSDLLISQPDTG-EQALEIADMLVRSGSVDVVVVDSVAALTPKAEIEGEM 159 Query: 253 ESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 + G A+L+ Q R+ IK+ +FIN + G M G + T Sbjct: 160 GDSHMGLQARLMSQALRKLTANIKRTNTLVIFINQIRMKIGLMFGNPETT 209
>RECA_MESFL (Q6F1R0) Protein recA (Recombinase A)| Length = 333 Score = 30.0 bits (66), Expect = 5.9 Identities = 16/57 (28%), Positives = 27/57 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 414 GE+ + G A+++ + R+ +I K K +FIN L G M G + T + Sbjct: 160 GEMSDQSIGLQARMMSKALRKLNGVISKSKTTVIFINQLREKIGIMFGNPETTTGGR 216
>RECA_PSEST (Q07809) Protein recA (Recombinase A)| Length = 347 Score = 29.6 bits (65), Expect = 7.7 Identities = 16/53 (30%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ + G A+L+ Q R+ IK +FIN + G M G+ + T Sbjct: 156 GEMGDAHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETT 208
>RECA_AGRT5 (P33156) Protein recA (Recombinase A)| Length = 363 Score = 29.6 bits (65), Expect = 7.7 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +1 Query: 244 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 402 GE+ G A+L+ Q R+ I K K +FIN + G M G+ + T Sbjct: 168 GEMGDSLPGLQARLMSQALRKLTASISKSKCMVIFINQIRMKIGVMFGSPETT 220
>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Fragment) Length = 486 Score = 29.6 bits (65), Expect = 7.7 Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 3/146 (2%) Frame = +1 Query: 163 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 342 G G GK+ + V + +S+ L S GE KL+R + +M + Sbjct: 246 GPPGTGKTLLAKAVATECKTTFFNISSSTLTSKYRGESEKLVRLLF----EMARFYAPTT 301 Query: 343 LFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEEN---PRVPIV 513 +FI+++D+ R G + ++ + + V A L+ VQ+ G+ EN ++ +V Sbjct: 302 IFIDEIDSICSRRGTSEEHEASRR-VKAELL--------VQMDGVGGASENEDPSKMVMV 352 Query: 514 VTGNDFSTLYAPLIRDGRMEKFYWAP 591 + +F +R R+EK + P Sbjct: 353 LAATNFPWDIDEALR-RRLEKRIYIP 377
>RECA_NEIEG (O86382) Protein recA (Recombinase A) (Fragment)| Length = 237 Score = 29.6 bits (65), Expect = 7.7 Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 11/81 (13%) Frame = +1 Query: 193 CELVFAKMGINPIMMSA-----------GELESGNAGEPAKLIRQRYREAADMIKKGKMC 339 C+++ G++ +++ + G++ + G A+L+ Q R+ IKK Sbjct: 89 CDMLVRSGGVDMVVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTGHIKKTNTL 148 Query: 340 CLFINDLDAGAGRMGGTTQYT 402 +FIN + G M G+ + T Sbjct: 149 VVFINQIRMKIGVMFGSPETT 169
>RECA_SHEON (Q8EBS0) Protein recA (Recombinase A)| Length = 357 Score = 29.6 bits (65), Expect = 7.7 Identities = 17/68 (25%), Positives = 31/68 (45%) Frame = +1 Query: 199 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 378 +V + + P GE+ + G A+++ Q R+ A +K+ +FIN + G Sbjct: 143 IVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGV 202 Query: 379 MGGTTQYT 402 M G + T Sbjct: 203 MFGNPETT 210
>RECA_PASMU (P95526) Protein recA (Recombinase A)| Length = 354 Score = 29.6 bits (65), Expect = 7.7 Identities = 18/68 (26%), Positives = 29/68 (42%) Frame = +1 Query: 199 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGR 378 +V + + P GE+ + G A+L+ Q R+ IK +FIN + G Sbjct: 143 IVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGQIKNSNCLVVFINQIRMKIGV 202 Query: 379 MGGTTQYT 402 M G + T Sbjct: 203 MFGNPETT 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,597,542 Number of Sequences: 219361 Number of extensions: 2336497 Number of successful extensions: 7291 Number of sequences better than 10.0: 254 Number of HSP's better than 10.0 without gapping: 6892 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7261 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5824436538 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
