ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal39g11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.029
2dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.029
3dbj|AK102403.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.029
4dbj|AK062109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.029
5emb|Z70269.1|CEZK1086 Caenorhabditis elegans Cosmid ZK1086, comp... 44 0.45
6emb|BX004989.8| Zebrafish DNA sequence from clone CH211-167M4 in... 44 0.45
7gb|AF040654.3| Caenorhabditis elegans cosmid R06B10, complete se... 44 0.45
8gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 42 1.8
9gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 1.8
10emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.8
11gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.8
12dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.8
13dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.8
14gb|AY108042.1| Zea mays PCO071771 mRNA sequence 42 1.8
15emb|CT009684.7| Mouse DNA sequence from clone RP23-127L21 on chr... 42 1.8
16gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 42 1.8
17ref|XM_450862.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.0
18gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
19gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 7.0
20gb|AC005606.3| Homo sapiens chromosome 16, P1 clone 109-8C (LANL... 40 7.0
21gb|AC131592.10| Mus musculus chromosome 1, clone RP24-547I3, com... 40 7.0
22ref|XM_593413.2| PREDICTED: Bos taurus similar to zyg-11 homolog... 40 7.0
23gb|AC111010.5| Mus musculus BAC clone RP23-419L21 from chromosom... 40 7.0
24gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome... 40 7.0
25ref|NM_016257.2| Homo sapiens hippocalcin like 4 (HPCAL4), mRNA 40 7.0
26gb|AC162173.4| Mus musculus chromosome 1, clone RP23-447B9, comp... 40 7.0
27gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.0
28gb|AC134459.4| Mus musculus BAC clone RP23-360L15 from chromosom... 40 7.0
29gb|AC115073.9| Mus musculus chromosome 8, clone RP24-417J18, com... 40 7.0
30gb|AC115116.6| Mus musculus BAC clone RP23-62I3 from chromosome ... 40 7.0
31gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 7.0
32gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, com... 40 7.0
33emb|BX088589.14| Zebrafish DNA sequence from clone DKEY-27E7 in ... 40 7.0
34emb|Z93382.1|CEF45G2 Caenorhabditis elegans Cosmid F45G2, comple... 40 7.0
35ref|XM_501889.1| Yarrowia lipolytica CLIB122, YALI0C16027g predi... 40 7.0
36gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 7.0
37gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.0
38emb|X61084.1|CGRHOD C.griseus rhodopsin gene for opsin protein 40 7.0
39emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.0
40emb|BX640432.1| Bordetella parapertussis strain 12822, complete ... 40 7.0
41emb|BX640413.1| Bordetella pertussis strain Tohama I, complete g... 40 7.0
42emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 7.0
43emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 40 7.0
44emb|AL136591.1|HSM801565 Homo sapiens mRNA; cDNA DKFZp761G122 (f... 40 7.0
45gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.0
46ref|XM_939689.1| PREDICTED: Homo sapiens neuropeptide W (NPW), mRNA 40 7.0
47ref|XM_496111.2| PREDICTED: Homo sapiens neuropeptide W (NPW), mRNA 40 7.0
48gb|CP000249.1| Frankia sp. CcI3, complete genome 40 7.0
49gb|DQ067263.1| Kocuria rosea maltooligosyl trehalose synthase (t... 40 7.0
50dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
51dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
52dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
53dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
54gb|AC154574.2| Mus musculus BAC clone RP23-399K3 from chromosome... 40 7.0
55gb|AC008176.3|AC008176 Homo sapiens BAC clone RP11-451F11 from 7... 40 7.0
56gb|AC114272.4| Homo sapiens chromosome 19 clone LLNLR_296F4, com... 40 7.0
57dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 7.0
58dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
59gb|AE005126.1| Halobacterium sp. NRC-1 section 157 of 170 of the... 40 7.0
60ref|XM_321208.2| Anopheles gambiae str. PEST ENSANGP00000020095 ... 40 7.0
61emb|CR405682.23| Zebrafish DNA sequence from clone DKEYP-67E6 in... 40 7.0
62gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 7.0
63gb|AC154614.3| Mus musculus BAC clone RP23-255I2 from chromosome... 40 7.0
64gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
65gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
66emb|BX664712.3|CNS09SC2 Oryza sativa chromosome 12, . BAC B1373G... 40 7.0
67dbj|AB084276.1| Homo sapiens prepro-NPW mRNA for prepro-Neuropep... 40 7.0
68emb|AL929467.6| Zebrafish DNA sequence from clone CH211-148E17, ... 40 7.0
69gb|AC142099.3| Mus musculus BAC clone RP24-350H4 from 6, complet... 40 7.0
70gb|AC139320.4| Mus musculus BAC clone RP24-410G8 from 9, complet... 40 7.0
71emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 40 7.0
72gb|AC004030.2| Homo sapiens DNA from chromosome 19, cosmid F2185... 40 7.0
73gb|M55171.1|MUSOPS Mouse opsin (MOPS) gene, complete cds 40 7.0
74emb|AL365521.1|HST000257 Homo sapiens mRNA full length insert cD... 40 7.0 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                       
Query: 173     cgtcgccgaggacgccctttttcggaaccatcagggtcac 212
               |||||||||||||||| ||||| || || |||||||||||
Sbjct: 4970728 cgtcgccgaggacgccttttttggggacaatcagggtcac 4970689
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>dbj|AP002746.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0671B11
          Length = 168372

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 173   cgtcgccgaggacgccctttttcggaaccatcagggtcac 212
             |||||||||||||||| ||||| || || |||||||||||
Sbjct: 71181 cgtcgccgaggacgccttttttggggacaatcagggtcac 71142
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>dbj|AK102403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033092K06, full
            insert sequence
          Length = 1907

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 173  cgtcgccgaggacgccctttttcggaaccatcagggtcac 212
            |||||||||||||||| ||||| || || |||||||||||
Sbjct: 1645 cgtcgccgaggacgccttttttggggacaatcagggtcac 1684
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>dbj|AK062109.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B07, full
            insert sequence
          Length = 1476

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 173  cgtcgccgaggacgccctttttcggaaccatcagggtcac 212
            |||||||||||||||| ||||| || || |||||||||||
Sbjct: 1214 cgtcgccgaggacgccttttttggggacaatcagggtcac 1253
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>emb|Z70269.1|CEZK1086 Caenorhabditis elegans Cosmid ZK1086, complete sequence
          Length = 17664

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 159  cgccggttcgtcgccgtcgccg 180
            ||||||||||||||||||||||
Sbjct: 2416 cgccggttcgtcgccgtcgccg 2437
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>emb|BX004989.8| Zebrafish DNA sequence from clone CH211-167M4 in linkage group 6,
              complete sequence
          Length = 172968

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 363    tgttgctggcatggcattaaca 384
              ||||||||||||||||||||||
Sbjct: 118404 tgttgctggcatggcattaaca 118383
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>gb|AF040654.3| Caenorhabditis elegans cosmid R06B10, complete sequence
          Length = 40468

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 159  cgccggttcgtcgccgtcgccg 180
            ||||||||||||||||||||||
Sbjct: 5238 cgccggttcgtcgccgtcgccg 5259
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 138     cgatcagcaggccggtgccgc 158
               |||||||||||||||||||||
Sbjct: 1893189 cgatcagcaggccggtgccgc 1893169
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 138     cgatcagcaggccggtgccgc 158
               |||||||||||||||||||||
Sbjct: 1536696 cgatcagcaggccggtgccgc 1536716
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 138     cgatcagcaggccggtgccgc 158
               |||||||||||||||||||||
Sbjct: 1423784 cgatcagcaggccggtgccgc 1423804
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 140    atcagcaggccggtgccgccg 160
              |||||||||||||||||||||
Sbjct: 882351 atcagcaggccggtgccgccg 882371
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 165     ttcgtcgccgtcgccgaggac 185
               |||||||||||||||||||||
Sbjct: 1453304 ttcgtcgccgtcgccgaggac 1453324



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 165     ttcgtcgccgtcgccgagga 184
               ||||||||||||||||||||
Sbjct: 6208964 ttcgtcgccgtcgccgagga 6208983



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 165     ttcgtcgccgtcgccgagga 184
               ||||||||||||||||||||
Sbjct: 1667613 ttcgtcgccgtcgccgagga 1667594
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 157     gccgccggttcgtcgccgtcgccga 181
               ||||||| |||||||||||||||||
Sbjct: 5809973 gccgccgcttcgtcgccgtcgccga 5809997
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>gb|AY108042.1| Zea mays PCO071771 mRNA sequence
          Length = 1197

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 167 cgtcgccgtcgccgaggacgc 187
           |||||||||||||||||||||
Sbjct: 143 cgtcgccgtcgccgaggacgc 163
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>emb|CT009684.7| Mouse DNA sequence from clone RP23-127L21 on chromosome 13, complete
             sequence
          Length = 205067

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 46    ccttccctgggcctggtggca 66
             |||||||||||||||||||||
Sbjct: 72078 ccttccctgggcctggtggca 72058
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 444     actggcctaatttagccatgc 464
               |||||||||||||||||||||
Sbjct: 1083110 actggcctaatttagccatgc 1083090
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>ref|XM_450862.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 282

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Plus

                                          
Query: 152 gtgccgccgccggtt--cgtcgccgtcgccg 180
           |||||||||||||||  ||||||||||||||
Sbjct: 22  gtgccgccgccggttgccgtcgccgtcgccg 52
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>gb|AC124151.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0019E05,
              complete sequence
          Length = 129021

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 154    gccgccgccggttcgtcgccgtcg 177
              ||||||||||| ||||||||||||
Sbjct: 112070 gccgccgccggatcgtcgccgtcg 112093
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 165     ttcgtcgccgtcgccgagga 184
               ||||||||||||||||||||
Sbjct: 4003196 ttcgtcgccgtcgccgagga 4003215
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>gb|AC005606.3| Homo sapiens chromosome 16, P1 clone 109-8C (LANL), complete sequence
          Length = 80662

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   tcgcgtcgacggccgcccgg 132
             ||||||||||||||||||||
Sbjct: 78987 tcgcgtcgacggccgcccgg 78968
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>gb|AC131592.10| Mus musculus chromosome 1, clone RP24-547I3, complete sequence
          Length = 154667

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    cgaatcctcctcctcggcag 90
             ||||||||||||||||||||
Sbjct: 40869 cgaatcctcctcctcggcag 40888
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>ref|XM_593413.2| PREDICTED: Bos taurus similar to zyg-11 homolog B (C. elegans)-like
            (LOC540351), mRNA
          Length = 4040

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 41   tccctccttccctgggcctg 60
            ||||||||||||||||||||
Sbjct: 3728 tccctccttccctgggcctg 3747
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>gb|AC111010.5| Mus musculus BAC clone RP23-419L21 from chromosome 14, complete sequence
          Length = 205141

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    acaacaagaagaagaaagag 299
              ||||||||||||||||||||
Sbjct: 204200 acaacaagaagaagaaagag 204181
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>gb|AC146605.3| Mus musculus BAC clone RP23-304J7 from chromosome 14, complete sequence
          Length = 225868

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    acaacaagaagaagaaagag 299
              ||||||||||||||||||||
Sbjct: 166100 acaacaagaagaagaaagag 166119
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>ref|NM_016257.2| Homo sapiens hippocalcin like 4 (HPCAL4), mRNA
          Length = 4277

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  caccatcatcgtcactaaga 434
            ||||||||||||||||||||
Sbjct: 3278 caccatcatcgtcactaaga 3297
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>gb|AC162173.4| Mus musculus chromosome 1, clone RP23-447B9, complete sequence
          Length = 169355

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 280    acaacaagaagaagaaagag 299
              ||||||||||||||||||||
Sbjct: 114083 acaacaagaagaagaaagag 114064
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 382      acaaaatgccatcaccgatc 401
                ||||||||||||||||||||
Sbjct: 12532829 acaaaatgccatcaccgatc 12532810
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>gb|AC134459.4| Mus musculus BAC clone RP23-360L15 from chromosome 8, complete sequence
          Length = 211773

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     ctgggcctggtggcaaatgc 71
              ||||||||||||||||||||
Sbjct: 173542 ctgggcctggtggcaaatgc 173523
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>gb|AC115073.9| Mus musculus chromosome 8, clone RP24-417J18, complete sequence
          Length = 161625

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    ctgggcctggtggcaaatgc 71
             ||||||||||||||||||||
Sbjct: 33218 ctgggcctggtggcaaatgc 33199
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>gb|AC115116.6| Mus musculus BAC clone RP23-62I3 from chromosome 1, complete sequence
          Length = 231896

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    acaacaagaagaagaaagag 299
              ||||||||||||||||||||
Sbjct: 218006 acaacaagaagaagaaagag 218025
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 137    ccgatcagcaggccggtgccgccg 160
              ||||||||||||||| ||||||||
Sbjct: 648834 ccgatcagcaggccgatgccgccg 648811
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>gb|AC093513.3| Homo sapiens chromosome 16 clone CTD-2517G10, complete sequence
          Length = 72483

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   tcgcgtcgacggccgcccgg 132
             ||||||||||||||||||||
Sbjct: 71204 tcgcgtcgacggccgcccgg 71223
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>emb|BX088589.14| Zebrafish DNA sequence from clone DKEY-27E7 in linkage group 12,
             complete sequence
          Length = 242558

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   tgttgctggcatggcattaa 382
             ||||||||||||||||||||
Sbjct: 82334 tgttgctggcatggcattaa 82353
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>emb|Z93382.1|CEF45G2 Caenorhabditis elegans Cosmid F45G2, complete sequence
          Length = 36309

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 382  acaaaatgccatcaccgatc 401
            ||||||||||||||||||||
Sbjct: 3064 acaaaatgccatcaccgatc 3083
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>ref|XM_501889.1| Yarrowia lipolytica CLIB122, YALI0C16027g predicted mRNA
          Length = 648

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 74  atcctcctcctcggcaggcacctg 97
           |||||||||||| |||||||||||
Sbjct: 600 atcctcctcctcagcaggcacctg 577
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 149     ccggtgccgccgccggttcg 168
               ||||||||||||||||||||
Sbjct: 1938864 ccggtgccgccgccggttcg 1938845
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>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03,
             from chromosome 3, complete sequence
          Length = 124550

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   acaaaatgccatcaccgatc 401
             ||||||||||||||||||||
Sbjct: 55112 acaaaatgccatcaccgatc 55131
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>emb|X61084.1|CGRHOD C.griseus rhodopsin gene for opsin protein
          Length = 11931

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   ctgacctggagctcaagatc 114
            ||||||||||||||||||||
Sbjct: 9996 ctgacctggagctcaagatc 9977
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>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 137    ccgatcagcaggccggtgccgccg 160
              ||||||||||||||| ||||||||
Sbjct: 297763 ccgatcagcaggccgatgccgccg 297740
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>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14
          Length = 346301

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 137    ccgatcagcaggccggtgccgccg 160
              ||||||||||||||| ||||||||
Sbjct: 266272 ccgatcagcaggccgatgccgccg 266249
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>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 137    ccgatcagcaggccggtgccgccg 160
              ||||||||||||||| ||||||||
Sbjct: 263907 ccgatcagcaggccgatgccgccg 263930
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 165   ttcgtcgccgtcgccgaggacgcc 188
             |||||||||| |||||||||||||
Sbjct: 53619 ttcgtcgccgccgccgaggacgcc 53642
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>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    ttcgtcgccgtcgccgagga 184
              ||||||||||||||||||||
Sbjct: 190563 ttcgtcgccgtcgccgagga 190544
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>emb|AL136591.1|HSM801565 Homo sapiens mRNA; cDNA DKFZp761G122 (from clone DKFZp761G122)
          Length = 4285

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  caccatcatcgtcactaaga 434
            ||||||||||||||||||||
Sbjct: 3278 caccatcatcgtcactaaga 3297
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>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0030D15, from chromosome 3, complete sequence
          Length = 151972

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 382    acaaaatgccatcaccgatc 401
              ||||||||||||||||||||
Sbjct: 144160 acaaaatgccatcaccgatc 144179
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>ref|XM_939689.1| PREDICTED: Homo sapiens neuropeptide W (NPW), mRNA
          Length = 823

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tcgcgtcgacggccgcccgg 132
           ||||||||||||||||||||
Sbjct: 190 tcgcgtcgacggccgcccgg 171
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>ref|XM_496111.2| PREDICTED: Homo sapiens neuropeptide W (NPW), mRNA
          Length = 823

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tcgcgtcgacggccgcccgg 132
           ||||||||||||||||||||
Sbjct: 190 tcgcgtcgacggccgcccgg 171
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 158     ccgccggttcgtcgccgtcg 177
               ||||||||||||||||||||
Sbjct: 1597413 ccgccggttcgtcgccgtcg 1597432
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>gb|DQ067263.1| Kocuria rosea maltooligosyl trehalose synthase (treY) gene, partial
           cds
          Length = 2100

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 171 gccgtcgccgaggacgccct 190
           ||||||||||||||||||||
Sbjct: 808 gccgtcgccgaggacgccct 827
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 154     gccgccgccggttcgtcgccgtcg 177
               ||||||||||| ||||||||||||
Sbjct: 6121764 gccgccgccggatcgtcgccgtcg 6121741
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 154      gccgccgccggttcgtcgccgtcg 177
                ||||||||||| ||||||||||||
Sbjct: 17237268 gccgccgccggatcgtcgccgtcg 17237291
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Plus

                                               
Query: 152      gtgccgccgccggtt--cgtcgccgtcgccg 180
                |||||||||||||||  ||||||||||||||
Sbjct: 13315124 gtgccgccgccggttgccgtcgccgtcgccg 13315154
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 382      acaaaatgccatcaccgatc 401
                ||||||||||||||||||||
Sbjct: 12529592 acaaaatgccatcaccgatc 12529573
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>gb|AC154574.2| Mus musculus BAC clone RP23-399K3 from chromosome 14, complete sequence
          Length = 180263

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    acaacaagaagaagaaagag 299
              ||||||||||||||||||||
Sbjct: 141737 acaacaagaagaagaaagag 141756
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>gb|AC008176.3|AC008176 Homo sapiens BAC clone RP11-451F11 from 7p11.2-p21, complete sequence
          Length = 90180

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 283   acaagaagaagaaagagcct 302
             ||||||||||||||||||||
Sbjct: 27913 acaagaagaagaaagagcct 27894
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>gb|AC114272.4| Homo sapiens chromosome 19 clone LLNLR_296F4, complete sequence
          Length = 11699

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  ctgggcctggtggcaaatgc 71
           ||||||||||||||||||||
Sbjct: 597 ctgggcctggtggcaaatgc 616
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 157     gccgccggttcgtcgccgtcgccg 180
               |||||||| |||||||||||||||
Sbjct: 5999445 gccgccggatcgtcgccgtcgccg 5999468
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>dbj|AP005692.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0055N01
          Length = 154783

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 29/31 (93%), Gaps = 2/31 (6%)
 Strand = Plus / Plus

                                             
Query: 152    gtgccgccgccggtt--cgtcgccgtcgccg 180
              |||||||||||||||  ||||||||||||||
Sbjct: 136558 gtgccgccgccggttgccgtcgccgtcgccg 136588
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>gb|AE005126.1| Halobacterium sp. NRC-1 section 157 of 170 of the complete genome
          Length = 10575

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  ccgccggttcgtcgccgtcg 177
            ||||||||||||||||||||
Sbjct: 4357 ccgccggttcgtcgccgtcg 4376
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>ref|XM_321208.2| Anopheles gambiae str. PEST ENSANGP00000020095
           (ENSANGG00000017606), partial mRNA
          Length = 1515

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 cgatcagcaggccggtgccg 157
           ||||||||||||||||||||
Sbjct: 355 cgatcagcaggccggtgccg 336
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>emb|CR405682.23| Zebrafish DNA sequence from clone DKEYP-67E6 in linkage group 12,
              complete sequence
          Length = 192457

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 363    tgttgctggcatggcattaa 382
              ||||||||||||||||||||
Sbjct: 137164 tgttgctggcatggcattaa 137183
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 139     gatcagcaggccggtgccgc 158
               ||||||||||||||||||||
Sbjct: 2123144 gatcagcaggccggtgccgc 2123125
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>gb|AC154614.3| Mus musculus BAC clone RP23-255I2 from chromosome 14, complete sequence
          Length = 186187

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 280   acaacaagaagaagaaagag 299
             ||||||||||||||||||||
Sbjct: 12453 acaacaagaagaagaaagag 12472
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 154      gccgccgccggttcgtcgccgtcg 177
                ||||||||||| ||||||||||||
Sbjct: 17332454 gccgccgccggatcgtcgccgtcg 17332477
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 154     gccgccgccggttcgtcgccgtcg 177
               ||||||||||| ||||||||||||
Sbjct: 6121666 gccgccgccggatcgtcgccgtcg 6121643
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>emb|BX664712.3|CNS09SC2 Oryza sativa chromosome 12, . BAC B1373G08 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 131531

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   gccgccgccggttcgtcgccgtcg 177
             ||||||||||| ||||||||||||
Sbjct: 18773 gccgccgccggatcgtcgccgtcg 18750
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>dbj|AB084276.1| Homo sapiens prepro-NPW mRNA for prepro-Neuropeptide W polypeptide,
           partial cds
          Length = 719

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tcgcgtcgacggccgcccgg 132
           ||||||||||||||||||||
Sbjct: 157 tcgcgtcgacggccgcccgg 138
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>emb|AL929467.6| Zebrafish DNA sequence from clone CH211-148E17, complete sequence
          Length = 156801

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 363  tgttgctggcatggcattaa 382
            ||||||||||||||||||||
Sbjct: 3625 tgttgctggcatggcattaa 3606
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>gb|AC142099.3| Mus musculus BAC clone RP24-350H4 from 6, complete sequence
          Length = 167731

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    ctgacctggagctcaagatc 114
             ||||||||||||||||||||
Sbjct: 17963 ctgacctggagctcaagatc 17982
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>gb|AC139320.4| Mus musculus BAC clone RP24-410G8 from 9, complete sequence
          Length = 176888

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 41    tccctccttccctgggcctggtgg 64
             ||||||||| ||||||||||||||
Sbjct: 87234 tccctccttgcctgggcctggtgg 87211
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 74      atcctcctcctcggcaggcacctg 97
               |||||||||||| |||||||||||
Sbjct: 2276306 atcctcctcctcagcaggcacctg 2276283
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>gb|AC004030.2| Homo sapiens DNA from chromosome 19, cosmid F21856, complete sequence
          Length = 37631

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    ctgggcctggtggcaaatgc 71
             ||||||||||||||||||||
Sbjct: 35463 ctgggcctggtggcaaatgc 35482
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>gb|M55171.1|MUSOPS Mouse opsin (MOPS) gene, complete cds
          Length = 9483

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   ctgacctggagctcaagatc 114
            ||||||||||||||||||||
Sbjct: 5336 ctgacctggagctcaagatc 5317
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>emb|AL365521.1|HST000257 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 2522007
          Length = 564

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 tcgcgtcgacggccgcccgg 132
           ||||||||||||||||||||
Sbjct: 352 tcgcgtcgacggccgcccgg 333


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,616,028
Number of Sequences: 3902068
Number of extensions: 5616028
Number of successful extensions: 140718
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 138548
Number of HSP's gapped (non-prelim): 2184
length of query: 516
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 493
effective length of database: 17,143,297,704
effective search space: 8451645768072
effective search space used: 8451645768072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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