| Clone Name | baal39g05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463779.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1663 Score = 135 bits (68), Expect = 3e-29 Identities = 102/114 (89%) Strand = Plus / Plus Query: 8 gaggttgcactggtggagcacctcanggctaaccccatgttccgtgtcggcctcgatgtt 67 ||||| ||||||||||||||||||| ||| |||||||||||||| ||||| || ||||| Sbjct: 984 gaggtagcactggtggagcacctcaaggccaaccccatgttccgcgtcggtcttgatgtg 1043 Query: 68 tttgaggatgagccttacatgaagccagggctggctgagatgaanaatgccgtc 121 |||||||||||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 1044 tttgaggatgagccttacatgaagcccggcctcgctgacatgaagaatgccgtc 1097
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 135 bits (68), Expect = 3e-29 Identities = 102/114 (89%) Strand = Plus / Minus Query: 8 gaggttgcactggtggagcacctcanggctaaccccatgttccgtgtcggcctcgatgtt 67 ||||| ||||||||||||||||||| ||| |||||||||||||| ||||| || ||||| Sbjct: 80869 gaggtagcactggtggagcacctcaaggccaaccccatgttccgcgtcggtcttgatgtg 80810 Query: 68 tttgaggatgagccttacatgaagccagggctggctgagatgaanaatgccgtc 121 |||||||||||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 80809 tttgaggatgagccttacatgaagcccggcctcgctgacatgaagaatgccgtc 80756
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 135 bits (68), Expect = 3e-29 Identities = 102/114 (89%) Strand = Plus / Minus Query: 8 gaggttgcactggtggagcacctcanggctaaccccatgttccgtgtcggcctcgatgtt 67 ||||| ||||||||||||||||||| ||| |||||||||||||| ||||| || ||||| Sbjct: 75478 gaggtagcactggtggagcacctcaaggccaaccccatgttccgcgtcggtcttgatgtg 75419 Query: 68 tttgaggatgagccttacatgaagccagggctggctgagatgaanaatgccgtc 121 |||||||||||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 75418 tttgaggatgagccttacatgaagcccggcctcgctgacatgaagaatgccgtc 75365
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 135 bits (68), Expect = 3e-29 Identities = 102/114 (89%) Strand = Plus / Minus Query: 8 gaggttgcactggtggagcacctcanggctaaccccatgttccgtgtcggcctcgatgtt 67 ||||| ||||||||||||||||||| ||| |||||||||||||| ||||| || ||||| Sbjct: 29896 gaggtagcactggtggagcacctcaaggccaaccccatgttccgcgtcggtcttgatgtg 29837 Query: 68 tttgaggatgagccttacatgaagccagggctggctgagatgaanaatgccgtc 121 |||||||||||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 29836 tttgaggatgagccttacatgaagcccggcctcgctgacatgaagaatgccgtc 29783
>dbj|AK072105.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119J12, full insert sequence Length = 2837 Score = 135 bits (68), Expect = 3e-29 Identities = 102/114 (89%) Strand = Plus / Plus Query: 8 gaggttgcactggtggagcacctcanggctaaccccatgttccgtgtcggcctcgatgtt 67 ||||| ||||||||||||||||||| ||| |||||||||||||| ||||| || ||||| Sbjct: 912 gaggtagcactggtggagcacctcaaggccaaccccatgttccgcgtcggtcttgatgtg 971 Query: 68 tttgaggatgagccttacatgaagccagggctggctgagatgaanaatgccgtc 121 |||||||||||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 972 tttgaggatgagccttacatgaagcccggcctcgctgacatgaagaatgccgtc 1025
>dbj|AK067642.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108J23, full insert sequence Length = 1662 Score = 135 bits (68), Expect = 3e-29 Identities = 102/114 (89%) Strand = Plus / Plus Query: 8 gaggttgcactggtggagcacctcanggctaaccccatgttccgtgtcggcctcgatgtt 67 ||||| ||||||||||||||||||| ||| |||||||||||||| ||||| || ||||| Sbjct: 985 gaggtagcactggtggagcacctcaaggccaaccccatgttccgcgtcggtcttgatgtg 1044 Query: 68 tttgaggatgagccttacatgaagccagggctggctgagatgaanaatgccgtc 121 |||||||||||||||||||||||||| || || ||||| ||||| ||||||||| Sbjct: 1045 tttgaggatgagccttacatgaagcccggcctcgctgacatgaagaatgccgtc 1098
>emb|AJ234416.1|HVU234416 Hordeum vulgare partial mRNA; clone cMWG0679.uni Length = 228 Score = 81.8 bits (41), Expect = 4e-13 Identities = 43/44 (97%) Strand = Plus / Plus Query: 1 gatcgacgaggttgcactggtggagcacctcanggctaacccca 44 |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 185 gatcgacgaggttgcactggtggagcacctcaaggctaacccca 228
>dbj|AB060810.1| Bruguiera gymnorhiza HPR mRNA for hydroxypyruvate reductase, complete cds Length = 1576 Score = 63.9 bits (32), Expect = 1e-07 Identities = 64/75 (85%) Strand = Plus / Plus Query: 44 atgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagggctggct 103 |||||||| || ||||| ||||| || ||||| || |||||||||||||||||||| || Sbjct: 905 atgttccgggttggccttgatgtcttcgaggacgaaccttacatgaagccagggcttgcc 964 Query: 104 gagatgaanaatgcc 118 || ||||| |||||| Sbjct: 965 gacatgaagaatgcc 979
>emb|X14609.1|CSNDHR Cucumis sativus mRNA for NAPH-dependent hydroxypyruvate reductase (EC 1.1.1.29) Length = 1437 Score = 54.0 bits (27), Expect = 9e-05 Identities = 60/71 (84%) Strand = Plus / Plus Query: 41 cccatgttccgtgtcggcctcgatgtttttgaggatgagccttacatgaagccagggctg 100 |||||||| || || ||||| ||||||||||||||||| || |||||||| || || || Sbjct: 908 cccatgtttcgagttggccttgatgtttttgaggatgaaccatacatgaaacctggactt 967 Query: 101 gctgagatgaa 111 ||||| ||||| Sbjct: 968 gctgatatgaa 978
>dbj|D49433.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyruvate reductase, complete cds Length = 1362 Score = 54.0 bits (27), Expect = 9e-05 Identities = 53/62 (85%) Strand = Plus / Plus Query: 56 ggcctcgatgtttttgaggatgagccttacatgaagccagggctggctgagatgaanaat 115 ||||||||||| || |||||||| || |||||||| || ||||| ||||| ||||| ||| Sbjct: 913 ggcctcgatgtcttcgaggatgaaccatacatgaaacctgggcttgctgatatgaagaat 972 Query: 116 gc 117 || Sbjct: 973 gc 974
>dbj|D49432.1| Cucurbita cv. Kurokawa Amakuri mRNA for hydroxypyruvate reductase, complete cds Length = 1269 Score = 54.0 bits (27), Expect = 9e-05 Identities = 53/62 (85%) Strand = Plus / Plus Query: 56 ggcctcgatgtttttgaggatgagccttacatgaagccagggctggctgagatgaanaat 115 ||||||||||| || |||||||| || |||||||| || ||||| ||||| ||||| ||| Sbjct: 913 ggcctcgatgtcttcgaggatgaaccatacatgaaacctgggcttgctgatatgaagaat 972 Query: 116 gc 117 || Sbjct: 973 gc 974
>gb|CP000300.1| Methanococcoides burtonii DSM 6242, complete genome Length = 2575032 Score = 42.1 bits (21), Expect = 0.36 Identities = 24/25 (96%) Strand = Plus / Plus Query: 60 tcgatgtttttgaggatgagcctta 84 |||||||||||||||| |||||||| Sbjct: 1676855 tcgatgtttttgaggaagagcctta 1676879
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 1.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 ggcctcgatgtttttgaggatgagcctt 83 ||||||||||||| |||||||| ||||| Sbjct: 647519 ggcctcgatgtttgtgaggatgggcctt 647546
>ref|NM_208920.1| Eremothecium gossypii ACR165Wp (ACR165W), mRNA Length = 3420 Score = 40.1 bits (20), Expect = 1.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 ggcctcgatgtttttgaggatgagcctt 83 ||||||||||||| |||||||| ||||| Sbjct: 3291 ggcctcgatgtttgtgaggatgggcctt 3318
>emb|AL157760.9| Human DNA sequence from clone RP11-113P14 on chromosome 13 Contains the 3' end of the DCAMKL1 gene for doublecortin and CaM kinase-like 1 (DCLK KIAA0369), complete sequence Length = 108649 Score = 38.2 bits (19), Expect = 5.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 73 ggatgagccttacatgaagccag 95 |||||||||||||||| |||||| Sbjct: 94711 ggatgagccttacatgcagccag 94733
>emb|AL024473.1|HS707K17 Human DNA sequence from clone RP4-707K17 on chromosome 20q13.1 Contains part of the PTPRT gene for protein tyrosine phosphatase receptor type T, ESTs, STSs and GSSs, complete sequence Length = 107387 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 catgaagccagggctggct 103 ||||||||||||||||||| Sbjct: 38980 catgaagccagggctggct 38998
>gb|AC006538.1|AC006538 Homo sapiens chromosome 19, BAC 41195 (CIT-B-31c16), complete sequence Length = 177540 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 gccagggctggctgagatg 109 ||||||||||||||||||| Sbjct: 152389 gccagggctggctgagatg 152371
>emb|AL928975.10| Zebrafish DNA sequence from clone CH211-133N4, complete sequence Length = 174480 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 64 tgtttttgaggatgagcct 82 ||||||||||||||||||| Sbjct: 134871 tgtttttgaggatgagcct 134853
>emb|AJ009611.6|HSAJ9611 Homo sapiens chromosome 19 sequence from PAC RPCI-1 155I10, complete sequence Length = 112022 Score = 38.2 bits (19), Expect = 5.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 91 gccagggctggctgagatg 109 ||||||||||||||||||| Sbjct: 18541 gccagggctggctgagatg 18523 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 760,591 Number of Sequences: 3902068 Number of extensions: 760591 Number of successful extensions: 46258 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46208 Number of HSP's gapped (non-prelim): 50 length of query: 121 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 100 effective length of database: 17,151,101,840 effective search space: 1715110184000 effective search space used: 1715110184000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)